Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene040287.t1 | XP_003622209.2 | 83.7 | 762 | 89 | 1 | 1 | 762 | 47 | 773 | 0.00E+00 | 1149 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene040287.t1 | Q9FQ20 | 25.4 | 816 | 495 | 18 | 1 | 758 | 49 | 808 | 3.1e-38 | 161.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene040287.t1 | G7L499 | 83.7 | 762 | 89 | 1 | 1 | 762 | 47 | 773 | 0.0e+00 | 1149.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene040287 | MS.gene058789 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene040287.t1 | MTR_7g031420 | 86.614 | 762 | 67 | 1 | 1 | 762 | 47 | 773 | 0.0 | 1333 |
| MS.gene040287.t1 | MTR_7g080575 | 45.122 | 82 | 44 | 1 | 678 | 759 | 1289 | 1369 | 5.32e-13 | 73.6 |
| MS.gene040287.t1 | MTR_7g080575 | 33.113 | 151 | 85 | 6 | 4 | 142 | 51 | 197 | 4.36e-11 | 67.4 |
| MS.gene040287.t1 | MTR_3g005770 | 40.367 | 109 | 54 | 4 | 658 | 758 | 593 | 698 | 2.08e-12 | 71.2 |
| MS.gene040287.t1 | MTR_3g005770 | 40.625 | 96 | 50 | 2 | 4 | 92 | 51 | 146 | 3.93e-11 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene040287.t1 | AT5G40840 | 30.250 | 400 | 212 | 9 | 409 | 758 | 272 | 654 | 2.85e-32 | 134 |
| MS.gene040287.t1 | AT5G40840 | 30.250 | 400 | 212 | 9 | 409 | 758 | 425 | 807 | 3.02e-32 | 134 |
| MS.gene040287.t1 | AT5G40840 | 48.696 | 115 | 53 | 1 | 1 | 109 | 49 | 163 | 6.54e-25 | 111 |
| MS.gene040287.t1 | AT5G40840 | 30.250 | 400 | 212 | 9 | 409 | 758 | 293 | 675 | 4.11e-32 | 133 |
| MS.gene040287.t1 | AT5G40840 | 30.175 | 401 | 212 | 10 | 409 | 758 | 425 | 808 | 8.06e-31 | 130 |
| MS.gene040287.t1 | AT5G40840 | 48.696 | 115 | 53 | 1 | 1 | 109 | 49 | 163 | 6.66e-25 | 111 |
| MS.gene040287.t1 | AT5G40840 | 30.175 | 401 | 212 | 10 | 409 | 758 | 293 | 676 | 1.15e-30 | 129 |
| MS.gene040287.t1 | AT5G40840 | 48.696 | 115 | 53 | 1 | 1 | 109 | 49 | 163 | 4.55e-25 | 111 |
| MS.gene040287.t1 | AT5G40840 | 26.300 | 327 | 174 | 9 | 409 | 685 | 425 | 734 | 5.16e-12 | 70.1 |
| MS.gene040287.t1 | AT5G16270 | 44.578 | 83 | 45 | 1 | 678 | 760 | 949 | 1030 | 1.61e-13 | 75.1 |
Find 118 sgRNAs with CRISPR-Local
Find 326 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTGCTTGGATATCTCCTTTC+TGG | 0.137626 | 7.4:-70157506 | MS.gene040287:CDS |
| GGGCACAAAGGAGGTGTTTC+TGG | 0.159725 | 7.4:+70154098 | None:intergenic |
| ATAGCCTTGCTGATTCTTTC+CGG | 0.221825 | 7.4:+70152377 | None:intergenic |
| GATTTGCAGTTTGACGATTT+TGG | 0.295712 | 7.4:-70156205 | MS.gene040287:intron |
| GAGTAGTTCAACAAATTTAC+TGG | 0.298497 | 7.4:-70155982 | MS.gene040287:CDS |
| CATGCCAGATACATTTGAAT+TGG | 0.310700 | 7.4:-70157351 | MS.gene040287:CDS |
| TTTAATGAGTCTCGGCAAAT+TGG | 0.312039 | 7.4:-70155585 | MS.gene040287:CDS |
| TTTAATGAGTCTCGGCAAAT+TGG | 0.312039 | 7.4:-70155816 | MS.gene040287:CDS |
| TCCTTGATCTTAAGAGAGTT+TGG | 0.313807 | 7.4:+70154269 | None:intergenic |
| GAGAGATTCTACTCTCTTCA+TGG | 0.314926 | 7.4:+70155907 | None:intergenic |
| GCTGTCCTAACTTTCACATT+TGG | 0.315417 | 7.4:+70154077 | None:intergenic |
| CTGCTCTCTTGACCACCTTA+TGG | 0.321650 | 7.4:-70156167 | MS.gene040287:CDS |
| TTGTTGCACATCCACATAAT+TGG | 0.327690 | 7.4:+70152050 | None:intergenic |
| CCATGAGAGCGAGCAATCTT+TGG | 0.328345 | 7.4:-70153997 | MS.gene040287:CDS |
| CCAGACCAAATCACTCTAAA+AGG | 0.328354 | 7.4:-70157187 | MS.gene040287:intron |
| CAAGGTTCTCAGAAACTATA+CGG | 0.338992 | 7.4:-70154178 | MS.gene040287:CDS |
| ACTCAAAACTCAGATGAGTT+TGG | 0.341456 | 7.4:-70154032 | MS.gene040287:CDS |
| AATTGGTATCGAGCATAATA+TGG | 0.343994 | 7.4:-70155799 | MS.gene040287:CDS |
| CTGTCCTAACTTTCACATTT+GGG | 0.349674 | 7.4:+70154078 | None:intergenic |
| TAGCCTTGCTGATTCTTTCC+GGG | 0.351434 | 7.4:+70152378 | None:intergenic |
| ATAAAACTTTCGGAGTTTGA+TGG | 0.354740 | 7.4:-70151981 | None:intergenic |
| GAATTGGATGCTATCGATCT+AGG | 0.357501 | 7.4:-70157335 | MS.gene040287:CDS |
| TGTGCCCAAATGTGAAAGTT+AGG | 0.361590 | 7.4:-70154082 | MS.gene040287:CDS |
| GCATCCAATTCAAATGTATC+TGG | 0.374689 | 7.4:+70157347 | None:intergenic |
| GAGAGATTCTACTCTCTTCA+TGG | 0.376526 | 7.4:+70155676 | None:intergenic |
| CTTTGAAAAGCGAGCAGATT+CGG | 0.376579 | 7.4:+70154953 | None:intergenic |
| CCAAAGATTGCTCGCTCTCA+TGG | 0.377918 | 7.4:+70153997 | None:intergenic |
| AAGCTTCAAGGCAGTTCAAT+TGG | 0.378858 | 7.4:-70155165 | MS.gene040287:CDS |
| GGGTTCTTCCTTGTGAAACT+TGG | 0.389382 | 7.4:+70152398 | None:intergenic |
| CTCAAAACTCAGATGAGTTT+GGG | 0.390984 | 7.4:-70154031 | MS.gene040287:CDS |
| GTGCAACAAAACAAAGCTTA+TGG | 0.408181 | 7.4:-70152036 | MS.gene040287:CDS |
| TTTGGAAAGGAATGCTGATA+TGG | 0.414606 | 7.4:-70153979 | MS.gene040287:CDS |
| TCGCTCTCATGGGGACTTGA+AGG | 0.414752 | 7.4:+70154008 | None:intergenic |
| GGAGGAATTTCGACATGGTC+TGG | 0.419664 | 7.4:+70154200 | None:intergenic |
| CCCAAACTCGATAAAACTTT+CGG | 0.423538 | 7.4:-70151991 | MS.gene040287:CDS |
| ACTCCTCAGTCTAAGTTTCA+AGG | 0.424086 | 7.4:-70155282 | MS.gene040287:CDS |
| ACTCCTCAGTCTAAGTTTCA+AGG | 0.424086 | 7.4:-70155387 | MS.gene040287:CDS |
| ATTGAATCTATTCAGAAGAC+TGG | 0.425940 | 7.4:+70154423 | None:intergenic |
| GTACACTTGAAGACACTTCC+AGG | 0.438697 | 7.4:-70157313 | MS.gene040287:intron |
| TTTGAAAACTACCAATTATG+TGG | 0.440029 | 7.4:-70152061 | MS.gene040287:CDS |
| ATCATTATGCCAAATGGATC+AGG | 0.440544 | 7.4:-70155760 | MS.gene040287:CDS |
| TGAAGCTTAGATTGAGGAGT+TGG | 0.440656 | 7.4:+70155180 | None:intergenic |
| ATTAAGATCATTATGCCAAA+TGG | 0.444458 | 7.4:-70155766 | MS.gene040287:CDS |
| ACTCCTCAATCTAAGCTTCA+AGG | 0.446500 | 7.4:-70155177 | MS.gene040287:CDS |
| CATTGTTTCATATGTATTCG+AGG | 0.457719 | 7.4:+70153825 | None:intergenic |
| CTGGGTGGTCTGAGCGAACC+AGG | 0.470211 | 7.4:-70152583 | MS.gene040287:intron |
| CAAAGATTGCTCGCTCTCAT+GGG | 0.471062 | 7.4:+70153998 | None:intergenic |
| CAGAGAGATGTAATGGTCTT+CGG | 0.471941 | 7.4:+70154476 | None:intergenic |
| AAACAACGACTTGAGCTTTG+CGG | 0.472803 | 7.4:+70154313 | None:intergenic |
| GCTGTTTCCTACAGAGTGCT+TGG | 0.475599 | 7.4:-70157521 | MS.gene040287:CDS |
| TCCAAACTCTCTTAAGATCA+AGG | 0.479064 | 7.4:-70154270 | MS.gene040287:CDS |
| TGTTAAAATATATTCAAAGC+AGG | 0.483805 | 7.4:-70157480 | MS.gene040287:CDS |
| GGTTCTTCCTTGTGAAACTT+GGG | 0.485265 | 7.4:+70152399 | None:intergenic |
| AACAAATTTACTGGCAAGCA+AGG | 0.486311 | 7.4:-70155973 | MS.gene040287:CDS |
| TCCATTTCAGGGTACTCAAA+AGG | 0.488316 | 7.4:-70154531 | MS.gene040287:intron |
| TCAACAATTGTGGACTCTGC+AGG | 0.490391 | 7.4:+70155204 | None:intergenic |
| TCAACAATTGTGGACTCTGC+AGG | 0.490391 | 7.4:+70155309 | None:intergenic |
| GAATGCTGATATGGTGGAAG+AGG | 0.503411 | 7.4:-70153970 | MS.gene040287:intron |
| CGTATAGTTTCTGAGAACCT+TGG | 0.504073 | 7.4:+70154179 | None:intergenic |
| TGAAACTTAGACTGAGGAGT+TGG | 0.517094 | 7.4:+70155285 | None:intergenic |
| TGAAACTTAGACTGAGGAGT+TGG | 0.517094 | 7.4:+70155390 | None:intergenic |
| AAGGAAACTCTACCAGAGTC+AGG | 0.517581 | 7.4:-70154251 | MS.gene040287:CDS |
| ATAGTTTCTGAGAACCTTGG+AGG | 0.523070 | 7.4:+70154182 | None:intergenic |
| TCAAGCACAGAGAGATGTAA+TGG | 0.531232 | 7.4:+70154469 | None:intergenic |
| GATTCGGTTGCAGTTGGTGT+AGG | 0.534452 | 7.4:+70154969 | None:intergenic |
| GAGATATCCAAGCACTCTGT+AGG | 0.538784 | 7.4:+70157514 | None:intergenic |
| ATATTGCAAAGCCACATATC+CGG | 0.539305 | 7.4:-70155948 | MS.gene040287:CDS |
| CGAGCAGATTCGGTTGCAGT+TGG | 0.539327 | 7.4:+70154963 | None:intergenic |
| TTCAAGGCAGTTCAATTGGA+AGG | 0.543555 | 7.4:-70155161 | MS.gene040287:CDS |
| CATACTTGATGCAAGTGACT+TGG | 0.545810 | 7.4:-70154506 | MS.gene040287:CDS |
| TCTCTTTGACAACAGAAGAC+TGG | 0.546815 | 7.4:+70155448 | None:intergenic |
| TTTCCTTGAAACTTAGACTG+AGG | 0.559377 | 7.4:+70155279 | None:intergenic |
| TTTCCTTGAAACTTAGACTG+AGG | 0.559377 | 7.4:+70155384 | None:intergenic |
| CTCGAATACATATGAAACAA+TGG | 0.560349 | 7.4:-70153824 | MS.gene040287:CDS |
| TTTGGGAACACAGAAGGAAG+CGG | 0.572106 | 7.4:-70155856 | MS.gene040287:CDS |
| CCACATATCCGGTCAAAATG+TGG | 0.575159 | 7.4:-70155937 | MS.gene040287:CDS |
| CTGCCTTGAAGCTTAGATTG+AGG | 0.576803 | 7.4:+70155174 | None:intergenic |
| TAAAACGATGGTCTTGCCTA+CGG | 0.580194 | 7.4:-70154910 | MS.gene040287:CDS |
| GATTCCGACACACCTGACTC+TGG | 0.582050 | 7.4:+70154239 | None:intergenic |
| AGGAGTTGGATCAACAATTG+TGG | 0.585461 | 7.4:+70155194 | None:intergenic |
| AGATCTCAATCTCATGAATG+AGG | 0.587390 | 7.4:-70153773 | MS.gene040287:intron |
| AGAGAGTAGAATCTCTCAAG+AGG | 0.589856 | 7.4:-70155901 | MS.gene040287:CDS |
| TTCACATTTGGGCACAAAGG+AGG | 0.591829 | 7.4:+70154089 | None:intergenic |
| ATTTGTTATTGATAAAACGA+TGG | 0.593270 | 7.4:-70154922 | MS.gene040287:CDS |
| TTTAGAGTGATTTGGTCTGG+GGG | 0.594136 | 7.4:+70157190 | None:intergenic |
| TATCCGGTCAAAATGTGGAC+GGG | 0.594387 | 7.4:-70155932 | MS.gene040287:CDS |
| AAGGTTCTCAGAAACTATAC+GGG | 0.594559 | 7.4:-70154177 | MS.gene040287:CDS |
| AGGTTCTACTTCTACTACGT+CGG | 0.595393 | 7.4:-70155006 | MS.gene040287:CDS |
| ACTTTCACATTTGGGCACAA+AGG | 0.597311 | 7.4:+70154086 | None:intergenic |
| TATCGAGCATAATATGACAT+TGG | 0.599739 | 7.4:-70155562 | MS.gene040287:CDS |
| AAAAGATGCAGAAGGTAACA+TGG | 0.599762 | 7.4:+70155605 | None:intergenic |
| TCAATTGGAAGGCCAAAACA+AGG | 0.602820 | 7.4:-70155150 | MS.gene040287:intron |
| TTATCTATCACATACTCCGT+AGG | 0.603052 | 7.4:+70154894 | None:intergenic |
| CCGCATATCCAGTCAAAATG+TGG | 0.605160 | 7.4:-70155706 | MS.gene040287:CDS |
| CAAATGGATCAGGAAAATGT+TGG | 0.607877 | 7.4:-70155519 | MS.gene040287:CDS |
| GTGTCTCAGTCTCAAACTTG+TGG | 0.612897 | 7.4:-70154146 | MS.gene040287:CDS |
| AGGAGTTGGATCAACAATTG+TGG | 0.613279 | 7.4:+70155299 | None:intergenic |
| AAGTTTCACAAGGAAGAACC+CGG | 0.613435 | 7.4:-70152396 | MS.gene040287:CDS |
| TATCGAGCATAATATGGCAA+TGG | 0.614046 | 7.4:-70155793 | MS.gene040287:CDS |
| AGAGCGAGCAATCTTTGGAA+AGG | 0.614684 | 7.4:-70153992 | MS.gene040287:CDS |
| TCTACCAGAGTCAGGTGTGT+CGG | 0.619000 | 7.4:-70154243 | MS.gene040287:CDS |
| AAAAGGGTTTCATTTGAACA+CGG | 0.623425 | 7.4:-70155243 | MS.gene040287:CDS |
| AAAGATTGCTCGCTCTCATG+GGG | 0.625802 | 7.4:+70153999 | None:intergenic |
| ACGACTTGAGCTTTGCGGAG+TGG | 0.627673 | 7.4:+70154318 | None:intergenic |
| ATATCCGGTCAAAATGTGGA+CGG | 0.634217 | 7.4:-70155933 | MS.gene040287:CDS |
| AAATTTGTTGAACTACTCGA+AGG | 0.635768 | 7.4:+70155987 | None:intergenic |
| GACTCATTAAAAGATGCAGA+AGG | 0.640269 | 7.4:+70155597 | None:intergenic |
| GACTCATTAAAAGATGCAGA+AGG | 0.640269 | 7.4:+70155828 | None:intergenic |
| AACTTGTCCCAAGTTTCACA+AGG | 0.641494 | 7.4:-70152406 | MS.gene040287:CDS |
| AAAAGGATTTCATTTGAACA+CGG | 0.644505 | 7.4:-70155348 | MS.gene040287:CDS |
| TCTGTTGTCAAAGAGAGCGT+CGG | 0.645978 | 7.4:-70155441 | MS.gene040287:CDS |
| TGATGAGCAAAGCTTTACAA+TGG | 0.648418 | 7.4:-70153800 | MS.gene040287:CDS |
| GGAAAGGAATGCTGATATGG+TGG | 0.649479 | 7.4:-70153976 | MS.gene040287:CDS |
| AGAGAGTAGAATCTCTCGAG+AGG | 0.662051 | 7.4:-70155670 | MS.gene040287:CDS |
| ACCATGTCGAAATTCCTCCA+AGG | 0.667869 | 7.4:-70154196 | MS.gene040287:CDS |
| ACCTTGGAGGAATTTCGACA+TGG | 0.673975 | 7.4:+70154195 | None:intergenic |
| GAACCCGGAAAGAATCAGCA+AGG | 0.675453 | 7.4:-70152381 | MS.gene040287:CDS |
| TCTACTCGACGATTGCAACA+AGG | 0.678324 | 7.4:-70157450 | MS.gene040287:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATCTATATATGATATAAT+TGG | - | chr7.4:70153002-70153021 | MS.gene040287:intron | 10.0% |
| !! | AATCTATATATGATATAATT+GGG | - | chr7.4:70153003-70153022 | MS.gene040287:intron | 10.0% |
| !! | ATAAAATAAAAATAAGATCA+AGG | - | chr7.4:70156143-70156162 | MS.gene040287:intron | 10.0% |
| !! | TCAAATATTCTATAAAATAA+TGG | + | chr7.4:70154396-70154415 | None:intergenic | 10.0% |
| !!! | AAAAAGTATATGTTATAAAA+AGG | - | chr7.4:70157225-70157244 | MS.gene040287:intron | 10.0% |
| !!! | TCAATTTTTAAAAGAAAAAT+GGG | + | chr7.4:70156453-70156472 | None:intergenic | 10.0% |
| !! | AAATTTAGAAGTTCAAAAAA+GGG | - | chr7.4:70154252-70154271 | MS.gene040287:CDS | 15.0% |
| !! | GAAAATTATGTTTCAAAATT+CGG | - | chr7.4:70157295-70157314 | MS.gene040287:intron | 15.0% |
| !!! | ATATTAATTCAGTTCTTTTT+AGG | - | chr7.4:70154887-70154906 | MS.gene040287:intron | 15.0% |
| !!! | CAATTTTTAAAAGAAAAATG+GGG | + | chr7.4:70156452-70156471 | None:intergenic | 15.0% |
| !!! | CTCAATTTTTAAAAGAAAAA+TGG | + | chr7.4:70156454-70156473 | None:intergenic | 15.0% |
| !!! | TTGTAAACTTTTTTTTTCAT+TGG | - | chr7.4:70154700-70154719 | MS.gene040287:intron | 15.0% |
| !!! | TTTTCTGTTTAATATTTTTC+AGG | - | chr7.4:70157426-70157445 | MS.gene040287:CDS | 15.0% |
| !! | AAATTTGTACTAAATAGAGT+TGG | - | chr7.4:70153029-70153048 | MS.gene040287:intron | 20.0% |
| !! | AATTAATATTCAATCATGAC+TGG | + | chr7.4:70154876-70154895 | None:intergenic | 20.0% |
| !! | AGGAGAATAAAATTAAATCA+CGG | - | chr7.4:70156163-70156182 | MS.gene040287:CDS | 20.0% |
| !! | ATGAAATTTCTGTTGATATT+TGG | - | chr7.4:70155581-70155600 | MS.gene040287:CDS | 20.0% |
| !! | CAATATCTTCTTATATTACA+AGG | + | chr7.4:70157252-70157271 | None:intergenic | 20.0% |
| !! | CAATGGTTAAAAAGAATAAT+AGG | + | chr7.4:70154664-70154683 | None:intergenic | 20.0% |
| !! | GAAATTTAGAAGTTCAAAAA+AGG | - | chr7.4:70154251-70154270 | MS.gene040287:CDS | 20.0% |
| !! | GTATAATTGTACAATAACTA+TGG | - | chr7.4:70153075-70153094 | MS.gene040287:intron | 20.0% |
| !! | GTTACATTGATCAAATTAAA+TGG | + | chr7.4:70152557-70152576 | None:intergenic | 20.0% |
| !! | TAATAATGAAGCAAAAACAA+AGG | - | chr7.4:70152949-70152968 | MS.gene040287:intron | 20.0% |
| !! | TATTATGACTTCAATTAAGA+CGG | + | chr7.4:70153144-70153163 | None:intergenic | 20.0% |
| !! | TGAATATGATTAAAATGTAG+TGG | + | chr7.4:70157275-70157294 | None:intergenic | 20.0% |
| !! | TGTTAAAATATATTCAAAGC+AGG | - | chr7.4:70152031-70152050 | MS.gene040287:CDS | 20.0% |
| !! | TTTCAAATTATTAGATGTGT+CGG | - | chr7.4:70156351-70156370 | MS.gene040287:intron | 20.0% |
| !!! | AATAGATATCAGTATGTTTT+TGG | - | chr7.4:70153637-70153656 | MS.gene040287:intron | 20.0% |
| !!! | ACATATACTTTTTTTTGTTG+AGG | + | chr7.4:70157218-70157237 | None:intergenic | 20.0% |
| !!! | ACTAAGAAGACAAAATTTTT+AGG | + | chr7.4:70154793-70154812 | None:intergenic | 20.0% |
| !!! | ATAGATATCAGTATGTTTTT+GGG | - | chr7.4:70153638-70153657 | MS.gene040287:intron | 20.0% |
| !!! | ATTTAGAAATGAAGATTTTC+TGG | + | chr7.4:70156828-70156847 | None:intergenic | 20.0% |
| !!! | ATTTGTTATTGATAAAACGA+TGG | - | chr7.4:70154589-70154608 | MS.gene040287:intron | 20.0% |
| !!! | GATGAAAATTTTCATTTTCT+TGG | + | chr7.4:70154039-70154058 | None:intergenic | 20.0% |
| !!! | TTTGATGACTTTAGAAAATA+TGG | - | chr7.4:70153221-70153240 | MS.gene040287:intron | 20.0% |
| !!! | TTTTAAGAATAACGACTAAT+TGG | + | chr7.4:70157355-70157374 | None:intergenic | 20.0% |
| ! | AAAAGGATTTCATTTGAACA+CGG | - | chr7.4:70154163-70154182 | MS.gene040287:CDS | 25.0% |
| ! | AAACACAAATTAAACATACC+AGG | + | chr7.4:70157170-70157189 | None:intergenic | 25.0% |
| ! | AACTCAAAAATAGATAAGCT+TGG | + | chr7.4:70156668-70156687 | None:intergenic | 25.0% |
| ! | AAGATTAAGCATACTATGAA+AGG | + | chr7.4:70152371-70152390 | None:intergenic | 25.0% |
| ! | ACTCAAAAATAGATAAGCTT+GGG | + | chr7.4:70156667-70156686 | None:intergenic | 25.0% |
| ! | ATGAAATATTATCAGAGCAA+TGG | + | chr7.4:70154681-70154700 | None:intergenic | 25.0% |
| ! | ATTAAGATCATTATGCCAAA+TGG | - | chr7.4:70153745-70153764 | MS.gene040287:intron | 25.0% |
| ! | CATAATTTATCAATCCTTTG+AGG | - | chr7.4:70152510-70152529 | MS.gene040287:intron | 25.0% |
| ! | CGTTCAATTATAATAAGCTA+TGG | - | chr7.4:70156860-70156879 | MS.gene040287:intron | 25.0% |
| ! | GAAATTTAGAAGTCCAAAAA+AGG | - | chr7.4:70154146-70154165 | MS.gene040287:CDS | 25.0% |
| ! | GTTTCATTTCACAGTATATT+AGG | + | chr7.4:70152407-70152426 | None:intergenic | 25.0% |
| ! | TAACATATTGTAAGAGAATC+AGG | + | chr7.4:70156208-70156227 | None:intergenic | 25.0% |
| ! | TCTATCATTGTTTGCAATAT+TGG | - | chr7.4:70156985-70157004 | MS.gene040287:intron | 25.0% |
| ! | TTATGTTTCAAAATTCGGAA+AGG | - | chr7.4:70157300-70157319 | MS.gene040287:intron | 25.0% |
| ! | TTATTTGATTCTGTCATCAT+TGG | + | chr7.4:70156127-70156146 | None:intergenic | 25.0% |
| ! | TTTGAAAACTACCAATTATG+TGG | - | chr7.4:70157450-70157469 | MS.gene040287:CDS | 25.0% |
| !! | ATTAAGATCATTTTGCCAAA+TGG | - | chr7.4:70153976-70153995 | MS.gene040287:CDS | 25.0% |
| !! | ATTTTTGAATTCTCAGTTTC+AGG | + | chr7.4:70156794-70156813 | None:intergenic | 25.0% |
| !! | TAAATGTTTACGCTTTTAAC+TGG | + | chr7.4:70152830-70152849 | None:intergenic | 25.0% |
| !! | TCACAAAAACTAAGGTTTTT+AGG | + | chr7.4:70153288-70153307 | None:intergenic | 25.0% |
| !! | TCATACTCAACATTCTATTT+TGG | - | chr7.4:70154481-70154500 | MS.gene040287:CDS | 25.0% |
| !! | TTTCTTGATTCTTTTCCTTA+CGG | - | chr7.4:70156902-70156921 | MS.gene040287:intron | 25.0% |
| !!! | AAGAAGACAAAATTTTTAGG+AGG | + | chr7.4:70154790-70154809 | None:intergenic | 25.0% |
| !!! | ATATTTTAACAACTCCAGAA+AGG | + | chr7.4:70152022-70152041 | None:intergenic | 25.0% |
| !!! | GTAACTGTTTTGTTTATCTT+TGG | - | chr7.4:70152572-70152591 | MS.gene040287:intron | 25.0% |
| !!! | GTTCAAATGAAATCCTTTTT+TGG | + | chr7.4:70154162-70154181 | None:intergenic | 25.0% |
| !!! | TAATACCTTTTAGAGTGATT+TGG | + | chr7.4:70152332-70152351 | None:intergenic | 25.0% |
| !!! | TGGTTTTATAAACCTTGTTT+TGG | + | chr7.4:70154376-70154395 | None:intergenic | 25.0% |
| !!! | TTCAGAAGTTTAATTTGCTA+GGG | - | chr7.4:70152236-70152255 | MS.gene040287:intron | 25.0% |
| !!! | TTTCAGAAGTTTAATTTGCT+AGG | - | chr7.4:70152235-70152254 | MS.gene040287:intron | 25.0% |
| AAAAATTGAGCTTAAGCTAG+AGG | - | chr7.4:70156464-70156483 | MS.gene040287:intron | 30.0% | |
| AAAAGGGTTTCATTTGAACA+CGG | - | chr7.4:70154268-70154287 | MS.gene040287:CDS | 30.0% | |
| AAGACGGAATTCAATTTAAC+TGG | + | chr7.4:70153128-70153147 | None:intergenic | 30.0% | |
| AAGCTACTCAAGAATAAATG+TGG | + | chr7.4:70155797-70155816 | None:intergenic | 30.0% | |
| ACGAACTAAATGATTTATCC+TGG | - | chr7.4:70156735-70156754 | MS.gene040287:intron | 30.0% | |
| ACTGCAAATCACAAAAACTA+AGG | + | chr7.4:70153296-70153315 | None:intergenic | 30.0% | |
| AGACGGAATTCAATTTAACT+GGG | + | chr7.4:70153127-70153146 | None:intergenic | 30.0% | |
| AGAGCTACACATATATAAAC+AGG | + | chr7.4:70152657-70152676 | None:intergenic | 30.0% | |
| ATTGAATCTATTCAGAAGAC+TGG | + | chr7.4:70155091-70155110 | None:intergenic | 30.0% | |
| CAAAAAACATAGTATAAGCC+AGG | + | chr7.4:70156756-70156775 | None:intergenic | 30.0% | |
| CATCATTGGTCCTAATTAAT+GGG | + | chr7.4:70156113-70156132 | None:intergenic | 30.0% | |
| CATTGTTTCATATGTATTCG+AGG | + | chr7.4:70155689-70155708 | None:intergenic | 30.0% | |
| CGATTCTTTGATTCTTTGAT+TGG | - | chr7.4:70153258-70153277 | MS.gene040287:intron | 30.0% | |
| CTCGAATACATATGAAACAA+TGG | - | chr7.4:70155687-70155706 | MS.gene040287:CDS | 30.0% | |
| GAATGTAGTGAAAAACTATG+AGG | + | chr7.4:70152889-70152908 | None:intergenic | 30.0% | |
| GAGCTACACATATATAAACA+GGG | + | chr7.4:70152656-70152675 | None:intergenic | 30.0% | |
| GAGTAGTTCAACAAATTTAC+TGG | - | chr7.4:70153529-70153548 | MS.gene040287:intron | 30.0% | |
| GCAACAAACATTCTCAAAAT+CGG | + | chr7.4:70157384-70157403 | None:intergenic | 30.0% | |
| GCGTAAACATTTAAGTGAAT+TGG | - | chr7.4:70152837-70152856 | MS.gene040287:intron | 30.0% | |
| GGACATCATATAGAAAGTAA+TGG | - | chr7.4:70156009-70156028 | MS.gene040287:CDS | 30.0% | |
| GTAAAACCATGTAAGAACTA+TGG | + | chr7.4:70152488-70152507 | None:intergenic | 30.0% | |
| TAAGAATAACGACTAATTGG+TGG | + | chr7.4:70157352-70157371 | None:intergenic | 30.0% | |
| TAGTTAAGGAGTTAGTTAGT+TGG | - | chr7.4:70152766-70152785 | MS.gene040287:intron | 30.0% | |
| TATCGAGCATAATATGACAT+TGG | - | chr7.4:70153949-70153968 | MS.gene040287:intron | 30.0% | |
| TCATCATTGGTCCTAATTAA+TGG | + | chr7.4:70156114-70156133 | None:intergenic | 30.0% | |
| ! | AAAAGTTTTGCTCAAGTATG+AGG | + | chr7.4:70157049-70157068 | None:intergenic | 30.0% |
| ! | AAATGTACTTTTCAGCCATA+AGG | + | chr7.4:70153362-70153381 | None:intergenic | 30.0% |
| ! | AATCATTTAGTTCGTAATCC+AGG | + | chr7.4:70156730-70156749 | None:intergenic | 30.0% |
| ! | AATTGGTATCGAGCATAATA+TGG | - | chr7.4:70153712-70153731 | MS.gene040287:intron | 30.0% |
| ! | AGATGTTTTGTCTAATACTG+CGG | - | chr7.4:70152427-70152446 | MS.gene040287:CDS | 30.0% |
| ! | TCAAAGTATCACTATCTTGA+AGG | + | chr7.4:70154933-70154952 | None:intergenic | 30.0% |
| !! | AAATTTGTTGAACTACTCGA+AGG | + | chr7.4:70153527-70153546 | None:intergenic | 30.0% |
| !! | AAGGCTATTTTATGAAATCC+TGG | - | chr7.4:70157149-70157168 | MS.gene040287:intron | 30.0% |
| !! | CAAAATTTTTAGGAGGCATA+TGG | + | chr7.4:70154783-70154802 | None:intergenic | 30.0% |
| !!! | CGTTGTTTTCAAGTAAGAAA+AGG | - | chr7.4:70155213-70155232 | MS.gene040287:CDS | 30.0% |
| !!! | GCTTATACTATGTTTTTTGC+AGG | - | chr7.4:70156757-70156776 | MS.gene040287:intron | 30.0% |
| !!! | TACTAACCTTGTTTTTCTAC+AGG | - | chr7.4:70155170-70155189 | MS.gene040287:CDS | 30.0% |
| AAAAGATGCAGAAGGTAACA+TGG | + | chr7.4:70153909-70153928 | None:intergenic | 35.0% | |
| AAACTATAAGCCATGAAGCA+CGG | + | chr7.4:70156418-70156437 | None:intergenic | 35.0% | |
| AACAAATTTACTGGCAAGCA+AGG | - | chr7.4:70153538-70153557 | MS.gene040287:intron | 35.0% | |
| AACTCTCAAGTTTACGATCT+AGG | + | chr7.4:70152717-70152736 | None:intergenic | 35.0% | |
| AACTTGAGAGTTGAGAAGTT+TGG | - | chr7.4:70152725-70152744 | MS.gene040287:CDS | 35.0% | |
| AAGGTTCTCAGAAACTATAC+GGG | - | chr7.4:70155334-70155353 | MS.gene040287:CDS | 35.0% | |
| AATTCAACAATCATCTCACC+TGG | + | chr7.4:70156949-70156968 | None:intergenic | 35.0% | |
| ACTCAAAACTCAGATGAGTT+TGG | - | chr7.4:70155479-70155498 | MS.gene040287:CDS | 35.0% | |
| AGATCCTGGAAAACAAAAAG+AGG | - | chr7.4:70157071-70157090 | MS.gene040287:CDS | 35.0% | |
| AGATCTCAATCTCATGAATG+AGG | - | chr7.4:70155738-70155757 | MS.gene040287:CDS | 35.0% | |
| AGTTGAGAAGTTTGGTTAAG+AGG | - | chr7.4:70152733-70152752 | MS.gene040287:CDS | 35.0% | |
| ATATTGCAAAGCCACATATC+CGG | - | chr7.4:70153563-70153582 | MS.gene040287:intron | 35.0% | |
| ATCACTCAGATAATCCTCAA+AGG | + | chr7.4:70152527-70152546 | None:intergenic | 35.0% | |
| ATCATTATGCCAAATGGATC+AGG | - | chr7.4:70153751-70153770 | MS.gene040287:intron | 35.0% | |
| CAAATGGATCAGGAAAATGT+TGG | - | chr7.4:70153761-70153780 | MS.gene040287:intron | 35.0% | |
| CAAGGTTCTCAGAAACTATA+CGG | - | chr7.4:70155333-70155352 | MS.gene040287:CDS | 35.0% | |
| CATGCCAGATACATTTGAAT+TGG | - | chr7.4:70152160-70152179 | MS.gene040287:intron | 35.0% | |
| CCCAAACTCGATAAAACTTT+CGG | - | chr7.4:70157520-70157539 | MS.gene040287:CDS | 35.0% | |
| CTCAAAACTCAGATGAGTTT+GGG | - | chr7.4:70155480-70155499 | MS.gene040287:CDS | 35.0% | |
| CTGTCCTAACTTTCACATTT+GGG | + | chr7.4:70155436-70155455 | None:intergenic | 35.0% | |
| GAAATTAACGAAACCTTACC+TGG | + | chr7.4:70152219-70152238 | None:intergenic | 35.0% | |
| GACTCATTAAAAGATGCAGA+AGG | + | chr7.4:70153686-70153705 | None:intergenic | 35.0% | |
| GATAAAACTTTCGGAGTTTG+AGG | - | chr7.4:70157529-70157548 | MS.gene040287:CDS | 35.0% | |
| GCATCCAATTCAAATGTATC+TGG | + | chr7.4:70152167-70152186 | None:intergenic | 35.0% | |
| GTGCAACAAAACAAAGCTTA+TGG | - | chr7.4:70157475-70157494 | MS.gene040287:CDS | 35.0% | |
| GTTAGTTGTGTGGAGAATAA+TGG | + | chr7.4:70155633-70155652 | None:intergenic | 35.0% | |
| TAGCAGCTATCCCATTAATT+AGG | - | chr7.4:70156100-70156119 | MS.gene040287:intron | 35.0% | |
| TATCGAGCATAATATGGCAA+TGG | - | chr7.4:70153718-70153737 | MS.gene040287:intron | 35.0% | |
| TCCAAACTCTCTTAAGATCA+AGG | - | chr7.4:70155241-70155260 | MS.gene040287:CDS | 35.0% | |
| TCCAGTGTAGTTACAAATGT+CGG | + | chr7.4:70156320-70156339 | None:intergenic | 35.0% | |
| TCCTTGATCTTAAGAGAGTT+TGG | + | chr7.4:70155245-70155264 | None:intergenic | 35.0% | |
| TCTGCATTGAACTGCAATTT+GGG | + | chr7.4:70155664-70155683 | None:intergenic | 35.0% | |
| TGATGAGCAAAGCTTTACAA+TGG | - | chr7.4:70155711-70155730 | MS.gene040287:CDS | 35.0% | |
| TGTAGTGAAAAACTATGAGG+TGG | + | chr7.4:70152886-70152905 | None:intergenic | 35.0% | |
| TTAGACAGACACGATTCAAT+TGG | + | chr7.4:70152616-70152635 | None:intergenic | 35.0% | |
| TTATCTATCACATACTCCGT+AGG | + | chr7.4:70154620-70154639 | None:intergenic | 35.0% | |
| TTCTGCATTGAACTGCAATT+TGG | + | chr7.4:70155665-70155684 | None:intergenic | 35.0% | |
| TTCTTGCGCTGAATATCTTA+TGG | - | chr7.4:70153404-70153423 | MS.gene040287:intron | 35.0% | |
| TTGTTGCACATCCACATAAT+TGG | + | chr7.4:70157464-70157483 | None:intergenic | 35.0% | |
| TTTAATGAGTCTCGGCAAAT+TGG | - | chr7.4:70153695-70153714 | MS.gene040287:intron | 35.0% | |
| TTTCCTTGAAACTTAGACTG+AGG | + | chr7.4:70154130-70154149 | None:intergenic | 35.0% | |
| TTTGGAAAGGAATGCTGATA+TGG | - | chr7.4:70155532-70155551 | MS.gene040287:CDS | 35.0% | |
| ! | ACAAAGTATTTGCTTGAAGC+GGG | + | chr7.4:70152692-70152711 | None:intergenic | 35.0% |
| ! | AGCAGTATGGAATCTGAAAT+TGG | + | chr7.4:70152301-70152320 | None:intergenic | 35.0% |
| ! | ATCATTTTGCCAAATGGATC+AGG | - | chr7.4:70153982-70154001 | MS.gene040287:CDS | 35.0% |
| ! | CAACATTTTCCTGATCCATT+TGG | + | chr7.4:70153994-70154013 | None:intergenic | 35.0% |
| ! | CACAAAGTATTTGCTTGAAG+CGG | + | chr7.4:70152693-70152712 | None:intergenic | 35.0% |
| ! | CTGCATCTTTTAATGAGTCT+CGG | - | chr7.4:70153687-70153706 | MS.gene040287:intron | 35.0% |
| ! | GATGTTTTGTCTAATACTGC+GGG | - | chr7.4:70152428-70152447 | MS.gene040287:CDS | 35.0% |
| ! | GATTTGCAGTTTGACGATTT+TGG | - | chr7.4:70153306-70153325 | MS.gene040287:intron | 35.0% |
| ! | GTTGTGTGATGGAATATCAA+TGG | + | chr7.4:70156569-70156588 | None:intergenic | 35.0% |
| ! | TGACATTTTCCTGATCCATT+TGG | + | chr7.4:70153763-70153782 | None:intergenic | 35.0% |
| ! | TTATTCTTGAGTAGCTTGTG+TGG | - | chr7.4:70155800-70155819 | MS.gene040287:CDS | 35.0% |
| !! | AACTGCAATTTGGGTTTTCT+AGG | + | chr7.4:70155655-70155674 | None:intergenic | 35.0% |
| !! | ACTGCATTTTGATCCATTTC+AGG | - | chr7.4:70154968-70154987 | MS.gene040287:CDS | 35.0% |
| !! | AGCAAAACTTTTCAAGATCC+TGG | - | chr7.4:70157057-70157076 | MS.gene040287:intron | 35.0% |
| !! | CCGAAAGTTTTATCGAGTTT+GGG | + | chr7.4:70157523-70157542 | None:intergenic | 35.0% |
| !! | CGAAAGTTTTATCGAGTTTG+GGG | + | chr7.4:70157522-70157541 | None:intergenic | 35.0% |
| !! | CTGCATTTTGATCCATTTCA+GGG | - | chr7.4:70154969-70154988 | MS.gene040287:CDS | 35.0% |
| !! | TCCGAAAGTTTTATCGAGTT+TGG | + | chr7.4:70157524-70157543 | None:intergenic | 35.0% |
| !! | TGTTTGCTATGATGATGTAC+AGG | - | chr7.4:70157016-70157035 | MS.gene040287:intron | 35.0% |
| !!! | ACTCAACATTCTATTTTGGC+AGG | - | chr7.4:70154485-70154504 | MS.gene040287:CDS | 35.0% |
| !!! | CAGTTTGACGATTTTGGTTT+GGG | - | chr7.4:70153312-70153331 | MS.gene040287:intron | 35.0% |
| !!! | CTTTTAGAGTGATTTGGTCT+GGG | + | chr7.4:70152326-70152345 | None:intergenic | 35.0% |
| !!! | TATGTTTTTGGGAACACAGA+AGG | - | chr7.4:70153649-70153668 | MS.gene040287:intron | 35.0% |
| !!! | TTTTAGAGTGATTTGGTCTG+GGG | + | chr7.4:70152325-70152344 | None:intergenic | 35.0% |
| AAACAACGACTTGAGCTTTG+CGG | + | chr7.4:70155201-70155220 | None:intergenic | 40.0% | |
| AACTTGTCCCAAGTTTCACA+AGG | - | chr7.4:70157105-70157124 | MS.gene040287:intron | 40.0% | |
| AAGCTTCAAGGCAGTTCAAT+TGG | - | chr7.4:70154346-70154365 | MS.gene040287:intron | 40.0% | |
| AAGTTTCACAAGGAAGAACC+CGG | - | chr7.4:70157115-70157134 | MS.gene040287:intron | 40.0% | |
| ACCGACATTTGTAACTACAC+TGG | - | chr7.4:70156316-70156335 | MS.gene040287:intron | 40.0% | |
| ACTCCTCAATCTAAGCTTCA+AGG | - | chr7.4:70154334-70154353 | MS.gene040287:intron | 40.0% | |
| ACTCCTCAGTCTAAGTTTCA+AGG | - | chr7.4:70154124-70154143 | MS.gene040287:CDS | 40.0% | |
| ACTTTCACATTTGGGCACAA+AGG | + | chr7.4:70155428-70155447 | None:intergenic | 40.0% | |
| AGAGAGTAGAATCTCTCAAG+AGG | - | chr7.4:70153610-70153629 | MS.gene040287:intron | 40.0% | |
| AGGAGTTGGATCAACAATTG+TGG | + | chr7.4:70154215-70154234 | None:intergenic | 40.0% | |
| AGGTTCTACTTCTACTACGT+CGG | - | chr7.4:70154505-70154524 | MS.gene040287:CDS | 40.0% | |
| ATATCCGGTCAAAATGTGGA+CGG | - | chr7.4:70153578-70153597 | MS.gene040287:intron | 40.0% | |
| CAGAGAGATGTAATGGTCTT+CGG | + | chr7.4:70155038-70155057 | None:intergenic | 40.0% | |
| CATACTTGATGCAAGTGACT+TGG | - | chr7.4:70155005-70155024 | MS.gene040287:CDS | 40.0% | |
| CCAGACCAAATCACTCTAAA+AGG | - | chr7.4:70152324-70152343 | MS.gene040287:intron | 40.0% | |
| CGTGTTCCATAGTTCTTACA+TGG | - | chr7.4:70152479-70152498 | MS.gene040287:intron | 40.0% | |
| GAATAACGACTAATTGGTGG+TGG | + | chr7.4:70157349-70157368 | None:intergenic | 40.0% | |
| GAATTGGATGCTATCGATCT+AGG | - | chr7.4:70152176-70152195 | MS.gene040287:intron | 40.0% | |
| GAGAGATTCTACTCTCTTCA+TGG | + | chr7.4:70153607-70153626 | None:intergenic | 40.0% | |
| GAGGCTTAGCTAGTTAGTTA+AGG | - | chr7.4:70152752-70152771 | MS.gene040287:intron | 40.0% | |
| GCTGTCCTAACTTTCACATT+TGG | + | chr7.4:70155437-70155456 | None:intergenic | 40.0% | |
| GGTTCTTCCTTGTGAAACTT+GGG | + | chr7.4:70157115-70157134 | None:intergenic | 40.0% | |
| TCAAGCACAGAGAGATGTAA+TGG | + | chr7.4:70155045-70155064 | None:intergenic | 40.0% | |
| TCAATTGGAAGGCCAAAACA+AGG | - | chr7.4:70154361-70154380 | MS.gene040287:intron | 40.0% | |
| TCCTGGAAAACAAAAAGAGG+CGG | - | chr7.4:70157074-70157093 | MS.gene040287:CDS | 40.0% | |
| TCTCTTTGACAACAGAAGAC+TGG | + | chr7.4:70154066-70154085 | None:intergenic | 40.0% | |
| TCTTGTCTTCTGTTTACTCC+TGG | - | chr7.4:70156709-70156728 | MS.gene040287:intron | 40.0% | |
| TGAAACTTAGACTGAGGAGT+TGG | + | chr7.4:70154124-70154143 | None:intergenic | 40.0% | |
| TGAAGCTTAGATTGAGGAGT+TGG | + | chr7.4:70154334-70154353 | None:intergenic | 40.0% | |
| TGTGCCCAAATGTGAAAGTT+AGG | - | chr7.4:70155429-70155448 | MS.gene040287:CDS | 40.0% | |
| TTCAAGGCAGTTCAATTGGA+AGG | - | chr7.4:70154350-70154369 | MS.gene040287:intron | 40.0% | |
| TTCTTAGTGCATACGAAGCA+CGG | - | chr7.4:70156230-70156249 | MS.gene040287:intron | 40.0% | |
| ! | ACACAACAGTGCAAGCTTTT+GGG | - | chr7.4:70156582-70156601 | MS.gene040287:intron | 40.0% |
| ! | AGCTTAAGCTAGAGGTATGT+CGG | - | chr7.4:70156472-70156491 | MS.gene040287:intron | 40.0% |
| ! | ATAGTTTCTGAGAACCTTGG+AGG | + | chr7.4:70155332-70155351 | None:intergenic | 40.0% |
| ! | CGTATAGTTTCTGAGAACCT+TGG | + | chr7.4:70155335-70155354 | None:intergenic | 40.0% |
| ! | CTTTGAAAAGCGAGCAGATT+CGG | + | chr7.4:70154561-70154580 | None:intergenic | 40.0% |
| ! | TAAAACGATGGTCTTGCCTA+CGG | - | chr7.4:70154601-70154620 | MS.gene040287:intron | 40.0% |
| ! | TCCATTTCAGGGTACTCAAA+AGG | - | chr7.4:70154980-70154999 | MS.gene040287:CDS | 40.0% |
| ! | TGCTATGATGATGTACAGGA+AGG | - | chr7.4:70157020-70157039 | MS.gene040287:intron | 40.0% |
| ! | TGTACTTTTCAGCCATAAGG+TGG | + | chr7.4:70153359-70153378 | None:intergenic | 40.0% |
| !! | ATAGCCTTGCTGATTCTTTC+CGG | + | chr7.4:70157137-70157156 | None:intergenic | 40.0% |
| !! | GAATTCGTCCACATTTTGAC+TGG | + | chr7.4:70153816-70153835 | None:intergenic | 40.0% |
| !! | GACATGCGCAATTTTTCAAC+AGG | + | chr7.4:70152134-70152153 | None:intergenic | 40.0% |
| !! | GATTGCAACAAGGTGCTTTT+TGG | - | chr7.4:70152071-70152090 | MS.gene040287:intron | 40.0% |
| !! | GGTTTTCTAGGTTAGTTGTG+TGG | + | chr7.4:70155643-70155662 | None:intergenic | 40.0% |
| !! | TCCTTTTGAGTACCCTGAAA+TGG | + | chr7.4:70154984-70155003 | None:intergenic | 40.0% |
| !! | TTTAGAGTGATTTGGTCTGG+GGG | + | chr7.4:70152324-70152343 | None:intergenic | 40.0% |
| !!! | CCACATTTTGACTGGATATG+CGG | + | chr7.4:70153808-70153827 | None:intergenic | 40.0% |
| !!! | CCTTTTAGAGTGATTTGGTC+TGG | + | chr7.4:70152327-70152346 | None:intergenic | 40.0% |
| !!! | GCAGTTTGACGATTTTGGTT+TGG | - | chr7.4:70153311-70153330 | MS.gene040287:intron | 40.0% |
| AAAGATTGCTCGCTCTCATG+GGG | + | chr7.4:70155515-70155534 | None:intergenic | 45.0% | |
| AAGCTTGCACTGTTGTGTGA+TGG | + | chr7.4:70156580-70156599 | None:intergenic | 45.0% | |
| AAGGAAACTCTACCAGAGTC+AGG | - | chr7.4:70155260-70155279 | MS.gene040287:CDS | 45.0% | |
| ACCATGTCGAAATTCCTCCA+AGG | - | chr7.4:70155315-70155334 | MS.gene040287:CDS | 45.0% | |
| ACCTTGGAGGAATTTCGACA+TGG | + | chr7.4:70155319-70155338 | None:intergenic | 45.0% | |
| AGAGAGTAGAATCTCTCGAG+AGG | - | chr7.4:70153841-70153860 | MS.gene040287:CDS | 45.0% | |
| AGATATGACCAACACCGTAC+CGG | + | chr7.4:70155989-70156008 | None:intergenic | 45.0% | |
| ATGCCTGCTCCGATGATATT+CGG | - | chr7.4:70155885-70155904 | MS.gene040287:CDS | 45.0% | |
| CAAAGATTGCTCGCTCTCAT+GGG | + | chr7.4:70155516-70155535 | None:intergenic | 45.0% | |
| CCACATATCCGGTCAAAATG+TGG | - | chr7.4:70153574-70153593 | MS.gene040287:intron | 45.0% | |
| CCGCATATCCAGTCAAAATG+TGG | - | chr7.4:70153805-70153824 | MS.gene040287:CDS | 45.0% | |
| CTGCCTTGAAGCTTAGATTG+AGG | + | chr7.4:70154340-70154359 | None:intergenic | 45.0% | |
| CTTGAAGACACTTCCAGGTA+AGG | - | chr7.4:70152203-70152222 | MS.gene040287:intron | 45.0% | |
| CTTGGGATAGAGCTAAGCTT+TGG | + | chr7.4:70156650-70156669 | None:intergenic | 45.0% | |
| GAGATATCCAAGCACTCTGT+AGG | + | chr7.4:70152000-70152019 | None:intergenic | 45.0% | |
| GAGTGGCCTGTAGAAAAACA+AGG | + | chr7.4:70155179-70155198 | None:intergenic | 45.0% | |
| GGAAAGGAATGCTGATATGG+TGG | - | chr7.4:70155535-70155554 | MS.gene040287:CDS | 45.0% | |
| GGGTTCTTCCTTGTGAAACT+TGG | + | chr7.4:70157116-70157135 | None:intergenic | 45.0% | |
| GTACACTTGAAGACACTTCC+AGG | - | chr7.4:70152198-70152217 | MS.gene040287:intron | 45.0% | |
| GTGCTTGGATATCTCCTTTC+TGG | - | chr7.4:70152005-70152024 | MS.gene040287:CDS | 45.0% | |
| GTGTCTCAGTCTCAAACTTG+TGG | - | chr7.4:70155365-70155384 | MS.gene040287:CDS | 45.0% | |
| TAAGCCATGAAGCACGGATA+CGG | + | chr7.4:70156412-70156431 | None:intergenic | 45.0% | |
| TATCCGGTCAAAATGTGGAC+GGG | - | chr7.4:70153579-70153598 | MS.gene040287:intron | 45.0% | |
| TCAACAATTGTGGACTCTGC+AGG | + | chr7.4:70154205-70154224 | None:intergenic | 45.0% | |
| TCTACTCGACGATTGCAACA+AGG | - | chr7.4:70152061-70152080 | MS.gene040287:CDS | 45.0% | |
| TGTGGAACTAGAGAGAACAG+TGG | - | chr7.4:70155818-70155837 | MS.gene040287:CDS | 45.0% | |
| TTCACATTTGGGCACAAAGG+AGG | + | chr7.4:70155425-70155444 | None:intergenic | 45.0% | |
| TTTGGGAACACAGAAGGAAG+CGG | - | chr7.4:70153655-70153674 | MS.gene040287:intron | 45.0% | |
| ! | AGAGCGAGCAATCTTTGGAA+AGG | - | chr7.4:70155519-70155538 | MS.gene040287:CDS | 45.0% |
| ! | ATTCTTTTCCTTACGGCAGC+TGG | - | chr7.4:70156909-70156928 | MS.gene040287:intron | 45.0% |
| ! | CACACAACAGTGCAAGCTTT+TGG | - | chr7.4:70156581-70156600 | MS.gene040287:intron | 45.0% |
| ! | CATGCAGTTTTCTCAGGAGA+GGG | - | chr7.4:70152454-70152473 | MS.gene040287:CDS | 45.0% |
| ! | GAATGCTGATATGGTGGAAG+AGG | - | chr7.4:70155541-70155560 | MS.gene040287:CDS | 45.0% |
| ! | GGGATTCATGCAGTTTTCTC+AGG | - | chr7.4:70152448-70152467 | MS.gene040287:CDS | 45.0% |
| ! | TCATGCAGTTTTCTCAGGAG+AGG | - | chr7.4:70152453-70152472 | MS.gene040287:CDS | 45.0% |
| ! | TCTGTTGTCAAAGAGAGCGT+CGG | - | chr7.4:70154070-70154089 | MS.gene040287:CDS | 45.0% |
| ! | TTCTTTTCCTTACGGCAGCT+GGG | - | chr7.4:70156910-70156929 | MS.gene040287:intron | 45.0% |
| ! | TTGGGCTAGACATAGAAGCA+TGG | + | chr7.4:70156509-70156528 | None:intergenic | 45.0% |
| !! | CCACATTTTGACCGGATATG+TGG | + | chr7.4:70153577-70153596 | None:intergenic | 45.0% |
| !! | TAGCCTTGCTGATTCTTTCC+GGG | + | chr7.4:70157136-70157155 | None:intergenic | 45.0% |
| !! | TATTTGTTGTCGACCACACC+TGG | - | chr7.4:70155946-70155965 | MS.gene040287:CDS | 45.0% |
| AAACAGCCCCTCGTACTCTT+TGG | + | chr7.4:70156528-70156547 | None:intergenic | 50.0% | |
| AACAGCCCCTCGTACTCTTT+GGG | + | chr7.4:70156527-70156546 | None:intergenic | 50.0% | |
| ATCAATCACCAGGACCGGTA+CGG | - | chr7.4:70155972-70155991 | MS.gene040287:CDS | 50.0% | |
| ATGAAGCACGGATACGGACA+CGG | + | chr7.4:70156406-70156425 | None:intergenic | 50.0% | |
| CACCTGGTCAATCAATCACC+AGG | - | chr7.4:70155962-70155981 | MS.gene040287:CDS | 50.0% | |
| CCAAAGATTGCTCGCTCTCA+TGG | + | chr7.4:70155517-70155536 | None:intergenic | 50.0% | |
| CCATGAGAGCGAGCAATCTT+TGG | - | chr7.4:70155514-70155533 | MS.gene040287:CDS | 50.0% | |
| CTGCTCTCTTGACCACCTTA+TGG | - | chr7.4:70153344-70153363 | MS.gene040287:intron | 50.0% | |
| GAACCCGGAAAGAATCAGCA+AGG | - | chr7.4:70157130-70157149 | MS.gene040287:intron | 50.0% | |
| GGAGGAATTTCGACATGGTC+TGG | + | chr7.4:70155314-70155333 | None:intergenic | 50.0% | |
| GGTCAATCAATCACCAGGAC+CGG | - | chr7.4:70155967-70155986 | MS.gene040287:CDS | 50.0% | |
| GGTGATTGATTGACCAGGTG+TGG | + | chr7.4:70155962-70155981 | None:intergenic | 50.0% | |
| GTCCTGGTGATTGATTGACC+AGG | + | chr7.4:70155967-70155986 | None:intergenic | 50.0% | |
| TCGACAACAAATAGCTGCCC+CGG | + | chr7.4:70155939-70155958 | None:intergenic | 50.0% | |
| TCTACCAGAGTCAGGTGTGT+CGG | - | chr7.4:70155268-70155287 | MS.gene040287:CDS | 50.0% | |
| TGCCTGCTCCGATGATATTC+GGG | - | chr7.4:70155886-70155905 | MS.gene040287:CDS | 50.0% | |
| ! | AGCTAGAGGTATGTCGGCAT+CGG | - | chr7.4:70156478-70156497 | MS.gene040287:intron | 50.0% |
| ! | GATGGTGGCCCGAATATCAT+CGG | + | chr7.4:70155897-70155916 | None:intergenic | 50.0% |
| ! | GATTCGGTTGCAGTTGGTGT+AGG | + | chr7.4:70154545-70154564 | None:intergenic | 50.0% |
| ! | GCTGTTTCCTACAGAGTGCT+TGG | - | chr7.4:70151990-70152009 | MS.gene040287:CDS | 50.0% |
| ! | GTCTAGCCCAAAGAGTACGA+GGG | - | chr7.4:70156518-70156537 | MS.gene040287:intron | 50.0% |
| ! | TCTAGCCCAAAGAGTACGAG+GGG | - | chr7.4:70156519-70156538 | MS.gene040287:intron | 50.0% |
| ! | TGTCTAGCCCAAAGAGTACG+AGG | - | chr7.4:70156517-70156536 | MS.gene040287:intron | 50.0% |
| !! | GAACCCGTCCACATTTTGAC+CGG | + | chr7.4:70153585-70153604 | None:intergenic | 50.0% |
| !! | GGTACGGTGTTGGTCATATC+TGG | - | chr7.4:70155988-70156007 | MS.gene040287:CDS | 50.0% |
| !!! | GCCGCCTCTTTTTGTTTTCC+AGG | + | chr7.4:70157078-70157097 | None:intergenic | 50.0% |
| ACAAATAGCTGCCCCGGAAG+TGG | + | chr7.4:70155933-70155952 | None:intergenic | 55.0% | |
| ACGACTTGAGCTTTGCGGAG+TGG | + | chr7.4:70155196-70155215 | None:intergenic | 55.0% | |
| ATCACACCCTGTCCACTTCC+GGG | - | chr7.4:70155918-70155937 | MS.gene040287:CDS | 55.0% | |
| CATCACACCCTGTCCACTTC+CGG | - | chr7.4:70155917-70155936 | MS.gene040287:CDS | 55.0% | |
| GATTCCGACACACCTGACTC+TGG | + | chr7.4:70155275-70155294 | None:intergenic | 55.0% | |
| GCACGGACACTCCTCAGATT+AGG | - | chr7.4:70156247-70156266 | MS.gene040287:intron | 55.0% | |
| GTGTCCGTATCCGTGCTTCA+TGG | - | chr7.4:70156405-70156424 | MS.gene040287:intron | 55.0% | |
| TCCTCAGATTAGGCGTGTCC+CGG | - | chr7.4:70156257-70156276 | MS.gene040287:intron | 55.0% | |
| TCGCTCTCATGGGGACTTGA+AGG | + | chr7.4:70155506-70155525 | None:intergenic | 55.0% | |
| TTTGGTCTGGGGGAGCAGTA+TGG | + | chr7.4:70152314-70152333 | None:intergenic | 55.0% | |
| ! | AGTGGACAGGGTGTGATGGA+TGG | + | chr7.4:70155915-70155934 | None:intergenic | 55.0% |
| ! | CGAGCAGATTCGGTTGCAGT+TGG | + | chr7.4:70154551-70154570 | None:intergenic | 55.0% |
| ! | TTTTCCTTACGGCAGCTGGG+TGG | - | chr7.4:70156913-70156932 | MS.gene040287:intron | 55.0% |
| !! | GGGCACAAAGGAGGTGTTTC+TGG | + | chr7.4:70155416-70155435 | None:intergenic | 55.0% |
| !! | GTCGGTGTCGTTCTCAGTGT+CGG | + | chr7.4:70156302-70156321 | None:intergenic | 55.0% |
| ACCGGGACACGCCTAATCTG+AGG | + | chr7.4:70156261-70156280 | None:intergenic | 60.0% | |
| ACGGATACGGACACGGACAC+GGG | + | chr7.4:70156399-70156418 | None:intergenic | 60.0% | |
| CACGGATACGGACACGGACA+CGG | + | chr7.4:70156400-70156419 | None:intergenic | 60.0% | |
| CGGAAGTGGACAGGGTGTGA+TGG | + | chr7.4:70155919-70155938 | None:intergenic | 60.0% | |
| GGCCCGAATATCATCGGAGC+AGG | + | chr7.4:70155891-70155910 | None:intergenic | 60.0% | |
| TCACACCCTGTCCACTTCCG+GGG | - | chr7.4:70155919-70155938 | MS.gene040287:CDS | 60.0% | |
| !! | GGACAGGGTGTGATGGATGG+TGG | + | chr7.4:70155912-70155931 | None:intergenic | 60.0% |
| AGCTGCCCCGGAAGTGGACA+GGG | + | chr7.4:70155927-70155946 | None:intergenic | 65.0% | |
| CACCAGGACCGGTACGGTGT+TGG | - | chr7.4:70155978-70155997 | MS.gene040287:CDS | 65.0% | |
| CACGGACACGGGACACGACA+CGG | + | chr7.4:70156388-70156407 | None:intergenic | 65.0% | |
| CAGACCACCCAGCTGCCGTA+AGG | + | chr7.4:70156920-70156939 | None:intergenic | 65.0% | |
| CTGGGTGGTCTGAGCGAACC+AGG | - | chr7.4:70156928-70156947 | MS.gene040287:intron | 65.0% | |
| TAGCTGCCCCGGAAGTGGAC+AGG | + | chr7.4:70155928-70155947 | None:intergenic | 65.0% | |
| ! | GACCAACACCGTACCGGTCC+TGG | + | chr7.4:70155983-70156002 | None:intergenic | 65.0% |
| TGCGTGGACAGCCCGGACCA+GGG | + | chr7.4:70155856-70155875 | None:intergenic | 70.0% | |
| AGTGGCCACTGCCAGCGCCC+TGG | - | chr7.4:70155836-70155855 | MS.gene040287:CDS | 75.0% | |
| CACTGCCAGCGCCCTGGTCC+GGG | - | chr7.4:70155842-70155861 | MS.gene040287:CDS | 75.0% | |
| CCACTGCCAGCGCCCTGGTC+CGG | - | chr7.4:70155841-70155860 | MS.gene040287:CDS | 75.0% | |
| CCGCTGCTGCGTGGACAGCC+CGG | + | chr7.4:70155863-70155882 | None:intergenic | 75.0% | |
| CCGGGCTGTCCACGCAGCAG+CGG | - | chr7.4:70155860-70155879 | MS.gene040287:CDS | 75.0% | |
| CTGCGTGGACAGCCCGGACC+AGG | + | chr7.4:70155857-70155876 | None:intergenic | 75.0% | |
| ! | CAGGCATCGCCGCTGCTGCG+TGG | + | chr7.4:70155872-70155891 | None:intergenic | 75.0% |
| ! | GACAGCCCGGACCAGGGCGC+TGG | + | chr7.4:70155850-70155869 | None:intergenic | 80.0% |
| !!! | CCGGACCAGGGCGCTGGCAG+TGG | + | chr7.4:70155844-70155863 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 70151984 | 70157549 | 70151984 | ID=MS.gene040287 |
| chr7.4 | mRNA | 70151984 | 70157549 | 70151984 | ID=MS.gene040287.t1;Parent=MS.gene040287 |
| chr7.4 | exon | 70157314 | 70157549 | 70157314 | ID=MS.gene040287.t1.exon1;Parent=MS.gene040287.t1 |
| chr7.4 | CDS | 70157314 | 70157549 | 70157314 | ID=cds.MS.gene040287.t1;Parent=MS.gene040287.t1 |
| chr7.4 | exon | 70157188 | 70157225 | 70157188 | ID=MS.gene040287.t1.exon2;Parent=MS.gene040287.t1 |
| chr7.4 | CDS | 70157188 | 70157225 | 70157188 | ID=cds.MS.gene040287.t1;Parent=MS.gene040287.t1 |
| chr7.4 | exon | 70157058 | 70157104 | 70157058 | ID=MS.gene040287.t1.exon3;Parent=MS.gene040287.t1 |
| chr7.4 | CDS | 70157058 | 70157104 | 70157058 | ID=cds.MS.gene040287.t1;Parent=MS.gene040287.t1 |
| chr7.4 | exon | 70156160 | 70156218 | 70156160 | ID=MS.gene040287.t1.exon4;Parent=MS.gene040287.t1 |
| chr7.4 | CDS | 70156160 | 70156218 | 70156160 | ID=cds.MS.gene040287.t1;Parent=MS.gene040287.t1 |
| chr7.4 | exon | 70155151 | 70156052 | 70155151 | ID=MS.gene040287.t1.exon5;Parent=MS.gene040287.t1 |
| chr7.4 | CDS | 70155151 | 70156052 | 70155151 | ID=cds.MS.gene040287.t1;Parent=MS.gene040287.t1 |
| chr7.4 | exon | 70154909 | 70155026 | 70154909 | ID=MS.gene040287.t1.exon6;Parent=MS.gene040287.t1 |
| chr7.4 | CDS | 70154909 | 70155026 | 70154909 | ID=cds.MS.gene040287.t1;Parent=MS.gene040287.t1 |
| chr7.4 | exon | 70154407 | 70154543 | 70154407 | ID=MS.gene040287.t1.exon7;Parent=MS.gene040287.t1 |
| chr7.4 | CDS | 70154407 | 70154543 | 70154407 | ID=cds.MS.gene040287.t1;Parent=MS.gene040287.t1 |
| chr7.4 | exon | 70153971 | 70154341 | 70153971 | ID=MS.gene040287.t1.exon8;Parent=MS.gene040287.t1 |
| chr7.4 | CDS | 70153971 | 70154341 | 70153971 | ID=cds.MS.gene040287.t1;Parent=MS.gene040287.t1 |
| chr7.4 | exon | 70153774 | 70153860 | 70153774 | ID=MS.gene040287.t1.exon9;Parent=MS.gene040287.t1 |
| chr7.4 | CDS | 70153774 | 70153860 | 70153774 | ID=cds.MS.gene040287.t1;Parent=MS.gene040287.t1 |
| chr7.4 | exon | 70152718 | 70152754 | 70152718 | ID=MS.gene040287.t1.exon10;Parent=MS.gene040287.t1 |
| chr7.4 | CDS | 70152718 | 70152754 | 70152718 | ID=cds.MS.gene040287.t1;Parent=MS.gene040287.t1 |
| chr7.4 | exon | 70152584 | 70152605 | 70152584 | ID=MS.gene040287.t1.exon11;Parent=MS.gene040287.t1 |
| chr7.4 | CDS | 70152584 | 70152605 | 70152584 | ID=cds.MS.gene040287.t1;Parent=MS.gene040287.t1 |
| chr7.4 | exon | 70152363 | 70152495 | 70152363 | ID=MS.gene040287.t1.exon12;Parent=MS.gene040287.t1 |
| chr7.4 | CDS | 70152363 | 70152495 | 70152363 | ID=cds.MS.gene040287.t1;Parent=MS.gene040287.t1 |
| chr7.4 | exon | 70151984 | 70152085 | 70151984 | ID=MS.gene040287.t1.exon13;Parent=MS.gene040287.t1 |
| chr7.4 | CDS | 70151984 | 70152085 | 70151984 | ID=cds.MS.gene040287.t1;Parent=MS.gene040287.t1 |
| Gene Sequence |
| Protein sequence |
