Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058789.t1 | XP_003598058.2 | 90.1 | 567 | 41 | 5 | 1 | 556 | 45 | 607 | 6.10E-253 | 883.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058789.t1 | Q9FQ19 | 31.3 | 444 | 233 | 14 | 1 | 410 | 45 | 450 | 8.3e-33 | 143.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058789.t1 | G7J066 | 90.1 | 567 | 41 | 5 | 1 | 556 | 45 | 607 | 4.4e-253 | 883.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051914 | MS.gene058789 | 0.814908 | 1.21E-51 | -1.69E-46 |
| MS.gene054850 | MS.gene058789 | 0.803049 | 4.20E-49 | -1.69E-46 |
| MS.gene05652 | MS.gene058789 | 0.801385 | 9.23E-49 | -1.69E-46 |
| MS.gene058128 | MS.gene058789 | 0.820966 | 5.19E-53 | -1.69E-46 |
| MS.gene058789 | MS.gene059616 | 0.818898 | 1.54E-52 | -1.69E-46 |
| MS.gene058789 | MS.gene063235 | 0.802475 | 5.51E-49 | -1.69E-46 |
| MS.gene058789 | MS.gene064328 | 0.820237 | 7.63E-53 | -1.69E-46 |
| MS.gene058789 | MS.gene066563 | 0.818041 | 2.41E-52 | -1.69E-46 |
| MS.gene058789 | MS.gene070800 | 0.81174 | 6.02E-51 | -1.69E-46 |
| MS.gene058789 | MS.gene26406 | 0.820541 | 6.50E-53 | -1.69E-46 |
| MS.gene058789 | MS.gene28452 | 0.83722 | 5.91E-57 | -1.69E-46 |
| MS.gene058789 | MS.gene31973 | 0.803506 | 3.37E-49 | -1.69E-46 |
| MS.gene058789 | MS.gene34503 | 0.80387 | 2.84E-49 | -1.69E-46 |
| MS.gene058789 | MS.gene36273 | 0.827121 | 1.86E-54 | -1.69E-46 |
| MS.gene058789 | MS.gene38102 | 0.815258 | 1.01E-51 | -1.69E-46 |
| MS.gene058789 | MS.gene39469 | 0.807636 | 4.59E-50 | -1.69E-46 |
| MS.gene058789 | MS.gene41190 | 0.811394 | 7.16E-51 | -1.69E-46 |
| MS.gene058789 | MS.gene48492 | 0.801646 | 8.16E-49 | -1.69E-46 |
| MS.gene058789 | MS.gene51554 | 0.815416 | 9.35E-52 | -1.69E-46 |
| MS.gene058789 | MS.gene52403 | 0.842475 | 2.53E-58 | -1.69E-46 |
| MS.gene058789 | MS.gene58132 | 0.818053 | 2.40E-52 | -1.69E-46 |
| MS.gene058789 | MS.gene58849 | 0.812713 | 3.69E-51 | -1.69E-46 |
| MS.gene058789 | MS.gene61094 | 0.801602 | 8.33E-49 | -1.69E-46 |
| MS.gene058789 | MS.gene61618 | 0.806824 | 6.82E-50 | -1.69E-46 |
| MS.gene058789 | MS.gene61684 | 0.821439 | 4.03E-53 | -1.69E-46 |
| MS.gene058789 | MS.gene63469 | 0.802398 | 5.72E-49 | -1.69E-46 |
| MS.gene058789 | MS.gene66615 | 0.815967 | 7.05E-52 | -1.69E-46 |
| MS.gene058789 | MS.gene70279 | 0.807385 | 5.19E-50 | -1.69E-46 |
| MS.gene058789 | MS.gene77563 | 0.801448 | 8.96E-49 | -1.69E-46 |
| MS.gene058789 | MS.gene93762 | 0.81513 | 1.08E-51 | -1.69E-46 |
| MS.gene058789 | MS.gene94553 | 0.822819 | 1.93E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene036083 | MS.gene058789 | PPI |
| MS.gene058789 | MS.gene75311 | PPI |
| MS.gene88766 | MS.gene058789 | PPI |
| MS.gene058789 | MS.gene035509 | PPI |
| MS.gene058789 | MS.gene40323 | PPI |
| MS.gene058789 | MS.gene040766 | PPI |
| MS.gene058789 | MS.gene93311 | PPI |
| MS.gene058789 | MS.gene073753 | PPI |
| MS.gene44874 | MS.gene058789 | PPI |
| MS.gene060420 | MS.gene058789 | PPI |
| MS.gene43780 | MS.gene058789 | PPI |
| MS.gene62578 | MS.gene058789 | PPI |
| MS.gene040287 | MS.gene058789 | PPI |
| MS.gene058789 | MS.gene37862 | PPI |
| MS.gene009902 | MS.gene058789 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058789.t1 | MTR_3g005770 | 91.358 | 567 | 34 | 5 | 1 | 556 | 45 | 607 | 0.0 | 1030 |
| MS.gene058789.t1 | MTR_7g080575 | 46.154 | 117 | 61 | 2 | 3 | 118 | 47 | 162 | 6.81e-19 | 91.3 |
| MS.gene058789.t1 | MTR_3g026750 | 46.914 | 81 | 40 | 1 | 4 | 81 | 28 | 108 | 1.65e-15 | 75.5 |
| MS.gene058789.t1 | MTR_7g031420 | 41.667 | 96 | 49 | 2 | 7 | 102 | 50 | 138 | 1.37e-11 | 67.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058789.t1 | AT3G59550 | 32.414 | 435 | 240 | 13 | 1 | 410 | 45 | 450 | 1.15e-43 | 165 |
| MS.gene058789.t1 | AT5G16270 | 45.299 | 117 | 62 | 2 | 3 | 118 | 47 | 162 | 1.81e-19 | 93.2 |
| MS.gene058789.t1 | AT5G40840 | 38.983 | 118 | 59 | 4 | 7 | 117 | 52 | 163 | 2.48e-12 | 70.1 |
| MS.gene058789.t1 | AT5G40840 | 38.983 | 118 | 59 | 4 | 7 | 117 | 52 | 163 | 3.61e-12 | 69.7 |
| MS.gene058789.t1 | AT5G40840 | 38.983 | 118 | 59 | 4 | 7 | 117 | 52 | 163 | 3.64e-12 | 69.7 |
Find 169 sgRNAs with CRISPR-Local
Find 216 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCTCCGGTGCATCTGTTAT+TGG | 0.224978 | 3.3:+1353158 | None:intergenic |
| GGCTCATCAACAACGATTTC+AGG | 0.226741 | 3.3:+1353179 | None:intergenic |
| ATTTCAGGTGCATCAGTTAT+TGG | 0.240679 | 3.3:+1353194 | None:intergenic |
| CTAAGAGATGGTTCAGAAAT+TGG | 0.243750 | 3.3:+1353891 | None:intergenic |
| ATTTCAGGTGCATCAGTTAT+TGG | 0.256541 | 3.3:+1353230 | None:intergenic |
| ACTGAAGAGCAAAAGGTTTA+AGG | 0.266284 | 3.3:-1353493 | MS.gene058789:CDS |
| CCTGTCCTTGCTCCATTTGA+TGG | 0.272790 | 3.3:+1353805 | None:intergenic |
| GTGGTCTAGCTGGTTGAGTT+GGG | 0.273834 | 3.3:+1354044 | None:intergenic |
| TGGTAGTATGTGACTCTATA+TGG | 0.278279 | 3.3:+1354260 | None:intergenic |
| GGCTCGTCAACAGCAATTTC+AGG | 0.282832 | 3.3:+1353215 | None:intergenic |
| CCCTGTCTTTGCTCCATTTG+AGG | 0.283637 | 3.3:+1353774 | None:intergenic |
| CTGGGGTTCCCATTGCATTA+AGG | 0.284115 | 3.3:-1355133 | MS.gene058789:CDS |
| TTTGACCAGCCTTTATTTAC+AGG | 0.284947 | 3.3:-1353462 | MS.gene058789:intron |
| TTTGGTCTTGCATCAGAATC+TGG | 0.310278 | 3.3:+1354445 | None:intergenic |
| TCGTCAGCAACTTGATTAAT+TGG | 0.312082 | 3.3:+1353254 | None:intergenic |
| TGGATCTCAGGAATCATTTC+AGG | 0.317785 | 3.3:+1354079 | None:intergenic |
| TAGCCATCATCATATCTTTC+AGG | 0.318226 | 3.3:-1354221 | MS.gene058789:CDS |
| TTACCTATTTGGTAACACTA+TGG | 0.321043 | 3.3:+1353692 | None:intergenic |
| GTCGCAACACCTCCTTTATT+AGG | 0.328789 | 3.3:+1353041 | None:intergenic |
| ACATAATTATCCACTATAAT+AGG | 0.329035 | 3.3:+1354619 | None:intergenic |
| CAAGATGAGATTACTCTTGC+AGG | 0.335666 | 3.3:-1354737 | MS.gene058789:intron |
| TTTCTCTTCCTTACTCTTTG+AGG | 0.341054 | 3.3:+1353732 | None:intergenic |
| TACCCTTGTCGGTGGAGATT+GGG | 0.342711 | 3.3:+1354312 | None:intergenic |
| TGGTCTAGCTGGTTGAGTTG+GGG | 0.346882 | 3.3:+1354045 | None:intergenic |
| CTCTGTCCCTGCTCCATTTG+AGG | 0.349871 | 3.3:+1353834 | None:intergenic |
| GCGAAAGGACGTCACTGCTT+TGG | 0.352534 | 3.3:-1353526 | MS.gene058789:CDS |
| CGAAAGGACGTCACTGCTTT+GGG | 0.353338 | 3.3:-1353525 | MS.gene058789:CDS |
| CAGAGTCTTTGCTTTGAGTT+GGG | 0.354582 | 3.3:+1353093 | None:intergenic |
| GTCTAGCTGGTTGAGTTGGG+GGG | 0.356361 | 3.3:+1354047 | None:intergenic |
| AAAGCTTACTCTTCCTCATT+TGG | 0.357256 | 3.3:+1354427 | None:intergenic |
| GGTGGTCTAGCTGGTTGAGT+TGG | 0.358749 | 3.3:+1354043 | None:intergenic |
| TGAAAATATTCCAACAGATA+TGG | 0.360614 | 3.3:-1354137 | MS.gene058789:CDS |
| CAATTTCTGAACCATCTCTT+AGG | 0.361011 | 3.3:-1353890 | MS.gene058789:CDS |
| CCTGTCTTTGCTCCATTTGA+GGG | 0.363641 | 3.3:+1353775 | None:intergenic |
| GTATGTTGCGAGTATCATTA+AGG | 0.366211 | 3.3:+1353556 | None:intergenic |
| GGTCTAGCTGGTTGAGTTGG+GGG | 0.366865 | 3.3:+1354046 | None:intergenic |
| CTTTGCTCCATTTGAGGGAC+AGG | 0.370149 | 3.3:+1353780 | None:intergenic |
| CGAGCTCATGCATCAGAAAC+TGG | 0.372324 | 3.3:-1352966 | MS.gene058789:CDS |
| ATGTCAGCTCACCTACTCTT+AGG | 0.379767 | 3.3:-1355110 | MS.gene058789:CDS |
| ACCCCATAGTGTTACCAAAT+AGG | 0.380002 | 3.3:-1353695 | MS.gene058789:intron |
| CTACCCTTGTCGGTGGAGAT+TGG | 0.384833 | 3.3:+1354311 | None:intergenic |
| GCAAAGACAGGGTCAGGATC+AGG | 0.387057 | 3.3:-1353763 | MS.gene058789:CDS |
| TCAGAGTCTTTGCTTTGAGT+TGG | 0.387509 | 3.3:+1353092 | None:intergenic |
| AATCAATTTATCAGTTCTGC+TGG | 0.398938 | 3.3:-1352888 | MS.gene058789:CDS |
| GAACAGCTACCTGTAAATAA+AGG | 0.399524 | 3.3:+1353453 | None:intergenic |
| GAGGGATCGCGAAGAGCTTC+CGG | 0.400091 | 3.3:+1354172 | None:intergenic |
| AGATAATCCCAAGTGCTTAC+AGG | 0.417460 | 3.3:-1353067 | MS.gene058789:CDS |
| TTGTTATATTGCAGGACCTC+TGG | 0.425634 | 3.3:-1352490 | MS.gene058789:intron |
| GGGGTTTCAGCATGGATCTC+AGG | 0.440280 | 3.3:+1354067 | None:intergenic |
| TACCTATTTGGTAACACTAT+GGG | 0.440577 | 3.3:+1353693 | None:intergenic |
| TCTGTCCCTGCTCCATTTGA+GGG | 0.440810 | 3.3:+1353835 | None:intergenic |
| CGACAAAACTGTTCATGAAA+AGG | 0.448116 | 3.3:-1354110 | MS.gene058789:CDS |
| TCTGGAGTTGGTGGTCTAGC+TGG | 0.449892 | 3.3:+1354034 | None:intergenic |
| TCTCATGGTGGCGCCTCAGA+TGG | 0.456879 | 3.3:-1354007 | MS.gene058789:CDS |
| ACAGGGTCCTGTCCCTCAAA+TGG | 0.459699 | 3.3:-1353787 | MS.gene058789:CDS |
| ACGTCACTGCTTTGGGCGCA+TGG | 0.461948 | 3.3:-1353518 | MS.gene058789:CDS |
| GACCTTGATGCGCTTAACTT+AGG | 0.464421 | 3.3:-1354927 | MS.gene058789:CDS |
| TCCTACCCCTCAAATGGAGC+AGG | 0.465260 | 3.3:-1353841 | MS.gene058789:CDS |
| CTGTCCTTGCTCCATTTGAT+GGG | 0.465308 | 3.3:+1353806 | None:intergenic |
| TCAGAGCATATAATGGATCC+TGG | 0.468440 | 3.3:-1355152 | None:intergenic |
| AATGGAGCAAAGACAGGGTC+AGG | 0.468932 | 3.3:-1353769 | MS.gene058789:CDS |
| CTTTGAGTTGGGATAGTGGC+AGG | 0.470829 | 3.3:+1353104 | None:intergenic |
| GCTTACAGGAGTCCTAATAA+AGG | 0.475665 | 3.3:-1353053 | MS.gene058789:CDS |
| AGGTGTTGCGACTCCTACTT+CGG | 0.476216 | 3.3:-1353030 | MS.gene058789:CDS |
| CCCTCAAATGGAGCAAAGAC+AGG | 0.476512 | 3.3:-1353775 | MS.gene058789:CDS |
| GCGCCACCATGAGAAGCATC+TGG | 0.477979 | 3.3:+1354016 | None:intergenic |
| ATCTCCACCGACAAGGGTAG+TGG | 0.483754 | 3.3:-1354308 | MS.gene058789:CDS |
| TTTGCTTTGAGTTGGGATAG+TGG | 0.484028 | 3.3:+1353100 | None:intergenic |
| TATGTTGCGAGTATCATTAA+GGG | 0.488049 | 3.3:+1353557 | None:intergenic |
| GGTGCTTGCCTCGCATCCTC+AGG | 0.489055 | 3.3:+1354981 | None:intergenic |
| ACAGAGTTCTACCCATCAAA+TGG | 0.492093 | 3.3:-1353817 | MS.gene058789:CDS |
| GTGAGAGGCCTCAAAGAGTA+AGG | 0.496584 | 3.3:-1353740 | MS.gene058789:CDS |
| CCATCAAATGGAGCAAGGAC+AGG | 0.497665 | 3.3:-1353805 | MS.gene058789:CDS |
| GCCTCAGATGGACAAGTTCA+TGG | 0.497833 | 3.3:-1353995 | MS.gene058789:CDS |
| GAGACAATGCGTTCAATCTC+CGG | 0.498235 | 3.3:+1353143 | None:intergenic |
| GACTCCTACTTCGGTTTCTG+AGG | 0.501640 | 3.3:-1353021 | MS.gene058789:CDS |
| ATGTTATCATGATATGTGCT+AGG | 0.504604 | 3.3:+1352939 | None:intergenic |
| CGAGGTGATGTTGCACCGTA+TGG | 0.509861 | 3.3:+1352987 | None:intergenic |
| GGTGGCGGTTGTGCATTTGA+AGG | 0.510426 | 3.3:+1354466 | None:intergenic |
| CCCTGCTCCATTTGAGGGGT+AGG | 0.511548 | 3.3:+1353840 | None:intergenic |
| TGAGAAGCATCTGGAGTTGG+TGG | 0.512175 | 3.3:+1354025 | None:intergenic |
| CATCTCCGAGGAAGATCATC+CGG | 0.513601 | 3.3:-1353297 | MS.gene058789:CDS |
| AGCTGACATCCTTAATGCAA+TGG | 0.514184 | 3.3:+1355124 | None:intergenic |
| CGGTTGTGCATTTGAAGGAC+TGG | 0.515647 | 3.3:+1354471 | None:intergenic |
| TGAACATCCACTACCCTTGT+CGG | 0.515801 | 3.3:+1354301 | None:intergenic |
| GGAGTAATAGTAGTATTATC+CGG | 0.515972 | 3.3:+1353278 | None:intergenic |
| TACTTCGGTTTCTGAGGGAA+TGG | 0.516748 | 3.3:-1353015 | MS.gene058789:CDS |
| AACTTATAAACATACAAAGA+AGG | 0.517826 | 3.3:-1353349 | MS.gene058789:CDS |
| GGTAGTATGTGACTCTATAT+GGG | 0.520004 | 3.3:+1354261 | None:intergenic |
| TTCTGATGCAAGACCAAATG+AGG | 0.521224 | 3.3:-1354440 | MS.gene058789:CDS |
| TATTATAGTGGATAATTATG+TGG | 0.525323 | 3.3:-1354617 | MS.gene058789:CDS |
| GATGCTTCCTACCCCTCAAA+TGG | 0.526984 | 3.3:-1353847 | MS.gene058789:CDS |
| AGCTACCTGTAAATAAAGGC+TGG | 0.529463 | 3.3:+1353457 | None:intergenic |
| GCTGACATCCTTAATGCAAT+GGG | 0.529498 | 3.3:+1355125 | None:intergenic |
| CATGGGAACTGAAGAGCAAA+AGG | 0.532189 | 3.3:-1353500 | MS.gene058789:CDS |
| TTAGGACTCCTGTAAGCACT+TGG | 0.539155 | 3.3:+1353059 | None:intergenic |
| TCAGCAACTTGATTAATTGG+AGG | 0.542703 | 3.3:+1353257 | None:intergenic |
| TTGTCGATATCCATATCTGT+TGG | 0.543539 | 3.3:+1354127 | None:intergenic |
| ACCCTTGTCGGTGGAGATTG+GGG | 0.545746 | 3.3:+1354313 | None:intergenic |
| CAGAGCATATAATGGATCCT+GGG | 0.547443 | 3.3:-1355151 | None:intergenic |
| TGTGACTCTATATGGGAACT+TGG | 0.549330 | 3.3:+1354268 | None:intergenic |
| AAGGTCAAAAGTGGCTGGCA+TGG | 0.550608 | 3.3:+1354944 | None:intergenic |
| AGGGTCAGGATCAGGGTGAG+AGG | 0.552465 | 3.3:-1353755 | MS.gene058789:CDS |
| GCATCAAGGTCAAAAGTGGC+TGG | 0.555614 | 3.3:+1354939 | None:intergenic |
| CTTAATGCAATGGGAACCCC+AGG | 0.556697 | 3.3:+1355134 | None:intergenic |
| CGTCACTGCTTTGGGCGCAT+GGG | 0.557386 | 3.3:-1353517 | MS.gene058789:CDS |
| CCATGAGAAGCATCTGGAGT+TGG | 0.557394 | 3.3:+1354022 | None:intergenic |
| CAAGATTGCAGTCGTTGAGA+AGG | 0.566651 | 3.3:+1355054 | None:intergenic |
| TTCCCCAATCTCCACCGACA+AGG | 0.572496 | 3.3:-1354315 | MS.gene058789:CDS |
| AAAATAGAACATACTGGCTG+TGG | 0.573158 | 3.3:+1352442 | None:intergenic |
| CAAAGACAGGGTCAGGATCA+GGG | 0.573338 | 3.3:-1353762 | MS.gene058789:CDS |
| TGAGGATGCGAGGCAAGCAC+CGG | 0.574961 | 3.3:-1354979 | MS.gene058789:CDS |
| TTGGTTGTGTCTTAGGTATG+AGG | 0.575285 | 3.3:-1354777 | MS.gene058789:intron |
| CATCAAATGGAGCAAGGACA+GGG | 0.576993 | 3.3:-1353804 | MS.gene058789:CDS |
| TCTAGCTGGTTGAGTTGGGG+GGG | 0.577025 | 3.3:+1354048 | None:intergenic |
| GCTATCGTCACTATTATGAC+TGG | 0.577246 | 3.3:+1354240 | None:intergenic |
| AAGCGCATCAAGGTCAAAAG+TGG | 0.581334 | 3.3:+1354935 | None:intergenic |
| TCCATGAACTTGTCCATCTG+AGG | 0.585386 | 3.3:+1353994 | None:intergenic |
| ACTCCTACTTCGGTTTCTGA+GGG | 0.585793 | 3.3:-1353020 | MS.gene058789:CDS |
| TGTTATCATGATATGTGCTA+GGG | 0.586588 | 3.3:+1352940 | None:intergenic |
| GATCCTGAAAGATATGATGA+TGG | 0.587656 | 3.3:+1354218 | None:intergenic |
| TAGGACTCCTGTAAGCACTT+GGG | 0.589038 | 3.3:+1353060 | None:intergenic |
| ACCTATTTGGTAACACTATG+GGG | 0.591558 | 3.3:+1353694 | None:intergenic |
| TCCCCAATCTCCACCGACAA+GGG | 0.591628 | 3.3:-1354314 | MS.gene058789:CDS |
| ACTTATAAACATACAAAGAA+GGG | 0.591939 | 3.3:-1353348 | MS.gene058789:CDS |
| TAGAACATACTGGCTGTGGC+TGG | 0.594523 | 3.3:+1352446 | None:intergenic |
| AGCCTAAGTTAAGCGCATCA+AGG | 0.594597 | 3.3:+1354925 | None:intergenic |
| GATTAGTATCTGAAAAGTCA+TGG | 0.596164 | 3.3:+1352907 | None:intergenic |
| AAAGAACAACTCCTAAGAGA+TGG | 0.596677 | 3.3:+1353879 | None:intergenic |
| ATTCCCTCAGAAACCGAAGT+AGG | 0.596700 | 3.3:+1353017 | None:intergenic |
| TGAGCCAATAACAGATGCAC+CGG | 0.598552 | 3.3:-1353162 | MS.gene058789:CDS |
| CCAACTCCAGATGCTTCTCA+TGG | 0.603864 | 3.3:-1354022 | MS.gene058789:CDS |
| TATATGTTCAAAACCTCACT+TGG | 0.605236 | 3.3:-1353321 | MS.gene058789:CDS |
| CTGTCCCTGCTCCATTTGAG+GGG | 0.606362 | 3.3:+1353836 | None:intergenic |
| ATTATCCGGATGATCTTCCT+CGG | 0.614080 | 3.3:+1353292 | None:intergenic |
| GTTTCTGATGCATGAGCTCG+AGG | 0.615602 | 3.3:+1352969 | None:intergenic |
| AGATCGAAGTCCTATTATAG+TGG | 0.617554 | 3.3:-1354629 | MS.gene058789:CDS |
| GGCATGGTAATAGAATGAAC+CGG | 0.619797 | 3.3:+1354960 | None:intergenic |
| CAACATACGACGGAAGCGAA+AGG | 0.625798 | 3.3:-1353541 | MS.gene058789:CDS |
| AGGGTAGTGGATGTTCAAGA+TGG | 0.628123 | 3.3:-1354295 | MS.gene058789:CDS |
| CCTCAAATGGAGCAAAGACA+GGG | 0.628235 | 3.3:-1353774 | MS.gene058789:CDS |
| TACAAAACAGACATTGCCAC+CGG | 0.629206 | 3.3:-1354191 | MS.gene058789:CDS |
| GAAGAGCAAAAGGTTTAAGG+AGG | 0.629432 | 3.3:-1353490 | MS.gene058789:CDS |
| TTAGGTATGAGGATGTTCAC+AGG | 0.630659 | 3.3:-1354766 | MS.gene058789:intron |
| TCCTCGGAGATGACCAAGTG+AGG | 0.635663 | 3.3:+1353308 | None:intergenic |
| GGCAGGCTGATCATCAGCAA+CGG | 0.636374 | 3.3:+1353121 | None:intergenic |
| ATGATACTCGCAACATACGA+CGG | 0.637431 | 3.3:-1353551 | MS.gene058789:CDS |
| AGAGCATATAATGGATCCTG+GGG | 0.637648 | 3.3:-1355150 | None:intergenic |
| GAGGGAATGGAGATACCATA+CGG | 0.637693 | 3.3:-1353002 | MS.gene058789:CDS |
| GGTCTTGCATCAGAATCTGG+TGG | 0.641603 | 3.3:+1354448 | None:intergenic |
| CTTGCATCAGAATCTGGTGG+CGG | 0.641738 | 3.3:+1354451 | None:intergenic |
| ACACTCTACCTGAGGATGCG+AGG | 0.644444 | 3.3:-1354989 | MS.gene058789:CDS |
| ACTCCAGATGCTTCTCATGG+TGG | 0.644956 | 3.3:-1354019 | MS.gene058789:CDS |
| ATCAAATAACACTCTACCTG+AGG | 0.646486 | 3.3:-1354997 | MS.gene058789:CDS |
| GTAGTGGATGTTCAAGATGG+TGG | 0.648922 | 3.3:-1354292 | MS.gene058789:CDS |
| TACAGGAGTCCTAATAAAGG+AGG | 0.651779 | 3.3:-1353050 | MS.gene058789:CDS |
| TACGAACAACACCTAAGAGT+AGG | 0.654224 | 3.3:+1355099 | None:intergenic |
| TCTACCCATCAAATGGAGCA+AGG | 0.655123 | 3.3:-1353810 | MS.gene058789:CDS |
| ACCTCACTTGGTCATCTCCG+AGG | 0.663917 | 3.3:-1353309 | MS.gene058789:CDS |
| TGTGCATTTGAAGGACTGGA+TGG | 0.666531 | 3.3:+1354475 | None:intergenic |
| ACATCCACTACCCTTGTCGG+TGG | 0.667254 | 3.3:+1354304 | None:intergenic |
| CCTACCCCTCAAATGGAGCA+GGG | 0.672267 | 3.3:-1353840 | MS.gene058789:CDS |
| AAGAGCAAAAGGTTTAAGGA+GGG | 0.683424 | 3.3:-1353489 | MS.gene058789:CDS |
| TGTGGCTATACGTTTCGATG+AGG | 0.683845 | 3.3:-1354599 | MS.gene058789:intron |
| TATCTTCTTCAAGAAACCAG+AGG | 0.698950 | 3.3:+1352474 | None:intergenic |
| GGATCGCGAAGAGCTTCCGG+TGG | 0.705021 | 3.3:+1354175 | None:intergenic |
| GGTATGAGGATGTTCACAGG+AGG | 0.722754 | 3.3:-1354763 | MS.gene058789:CDS |
| GTTATCATGATATGTGCTAG+GGG | 0.726681 | 3.3:+1352941 | None:intergenic |
| TCAGATGGACAAGTTCATGG+AGG | 0.765200 | 3.3:-1353992 | MS.gene058789:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTTGTAACTCAAATTAA+AGG | + | chr3.3:1353064-1353083 | None:intergenic | 15.0% |
| !! | AATGAAAAAAATTACCTATT+TGG | + | chr3.3:1353918-1353937 | None:intergenic | 15.0% |
| !! | ATAACAATGTATTATTCTAT+TGG | + | chr3.3:1353244-1353263 | None:intergenic | 15.0% |
| !! | ATAATAGTATGAAAAGATAA+AGG | + | chr3.3:1352725-1352744 | None:intergenic | 15.0% |
| !!! | ATTTTTTTGTATTCAATCAT+AGG | - | chr3.3:1353681-1353700 | MS.gene058789:intron | 15.0% |
| !!! | TTTTTTTGTATTCAATCATA+GGG | - | chr3.3:1353682-1353701 | MS.gene058789:intron | 15.0% |
| !! | AACTTATAAACATACAAAGA+AGG | - | chr3.3:1354247-1354266 | MS.gene058789:CDS | 20.0% |
| !! | ACATAATTATCCACTATAAT+AGG | + | chr3.3:1352980-1352999 | None:intergenic | 20.0% |
| !! | ACGAAAATATTCATTAACAA+TGG | + | chr3.3:1354951-1354970 | None:intergenic | 20.0% |
| !! | ACTTATAAACATACAAAGAA+GGG | - | chr3.3:1354248-1354267 | MS.gene058789:CDS | 20.0% |
| !! | CTATACAACTGATATAAAAT+TGG | - | chr3.3:1352800-1352819 | MS.gene058789:intron | 20.0% |
| !!! | ACTTGTTTTCTTGTATTTTT+AGG | - | chr3.3:1353093-1353112 | MS.gene058789:CDS | 20.0% |
| !!! | ATAAGTTCTATGTTGATAAA+AGG | + | chr3.3:1353040-1353059 | None:intergenic | 20.0% |
| !!! | ATCATTCAATTTGCAAATTT+TGG | - | chr3.3:1354171-1354190 | MS.gene058789:CDS | 20.0% |
| !!! | TATCAGTTGTATAGAAATTT+TGG | + | chr3.3:1352794-1352813 | None:intergenic | 20.0% |
| !!! | TATTATAGTGGATAATTATG+TGG | - | chr3.3:1352979-1352998 | MS.gene058789:CDS | 20.0% |
| ! | TATAAAATTGGTTGTGTCTT+AGG | - | chr3.3:1352812-1352831 | MS.gene058789:intron | 25.0% |
| ! | TCATTAACAATGGAACAAAA+CGG | + | chr3.3:1354941-1354960 | None:intergenic | 25.0% |
| ! | TGAAAATATTCCAACAGATA+TGG | - | chr3.3:1353459-1353478 | MS.gene058789:intron | 25.0% |
| !! | AATATTTTCAACAGCATCAT+TGG | + | chr3.3:1353449-1353468 | None:intergenic | 25.0% |
| !! | GGCTATGAAATAGATTTTAA+CGG | - | chr3.3:1352690-1352709 | MS.gene058789:intron | 25.0% |
| !!! | AATAACAGTTTTATGCTGAA+AGG | + | chr3.3:1354806-1354825 | None:intergenic | 25.0% |
| !!! | GCTATGAAATAGATTTTAAC+GGG | - | chr3.3:1352691-1352710 | MS.gene058789:intron | 25.0% |
| !!! | TTATTCTATTGGTTCATAAG+AGG | + | chr3.3:1353233-1353252 | None:intergenic | 25.0% |
| AATCAATTTATCAGTTCTGC+TGG | - | chr3.3:1354708-1354727 | MS.gene058789:intron | 30.0% | |
| ATAAAAGGAATGAACAGGAA+AGG | + | chr3.3:1353025-1353044 | None:intergenic | 30.0% | |
| ATGTTATCATGATATGTGCT+AGG | + | chr3.3:1354660-1354679 | None:intergenic | 30.0% | |
| CGTATGTAAATGTAAGAGAA+AGG | + | chr3.3:1353640-1353659 | None:intergenic | 30.0% | |
| CTTTCTTCATGACTCTATAA+TGG | + | chr3.3:1354019-1354038 | None:intergenic | 30.0% | |
| GATTAGTATCTGAAAAGTCA+TGG | + | chr3.3:1354692-1354711 | None:intergenic | 30.0% | |
| GATTGGGGAATAATTCTATA+AGG | + | chr3.3:1353271-1353290 | None:intergenic | 30.0% | |
| GGAGTAATAGTAGTATTATC+CGG | + | chr3.3:1354321-1354340 | None:intergenic | 30.0% | |
| TATATGTTCAAAACCTCACT+TGG | - | chr3.3:1354275-1354294 | MS.gene058789:CDS | 30.0% | |
| TATGTTGCGAGTATCATTAA+GGG | + | chr3.3:1354042-1354061 | None:intergenic | 30.0% | |
| TGTTATCATGATATGTGCTA+GGG | + | chr3.3:1354659-1354678 | None:intergenic | 30.0% | |
| ! | TACCTATTTGGTAACACTAT+GGG | + | chr3.3:1353906-1353925 | None:intergenic | 30.0% |
| ! | TCTTAACCTTGTTATATTGC+AGG | - | chr3.3:1355098-1355117 | MS.gene058789:CDS | 30.0% |
| ! | TGTTGATAAAAGGAATGAAC+AGG | + | chr3.3:1353030-1353049 | None:intergenic | 30.0% |
| ! | TTACCTATTTGGTAACACTA+TGG | + | chr3.3:1353907-1353926 | None:intergenic | 30.0% |
| !! | AGTTTTATGCTGAAAGGAAA+TGG | + | chr3.3:1354800-1354819 | None:intergenic | 30.0% |
| AAACTTGTGGCTTCTTATTC+AGG | - | chr3.3:1354213-1354232 | MS.gene058789:CDS | 35.0% | |
| AAAGAACAACTCCTAAGAGA+TGG | + | chr3.3:1353720-1353739 | None:intergenic | 35.0% | |
| AAAGCTTACTCTTCCTCATT+TGG | + | chr3.3:1353172-1353191 | None:intergenic | 35.0% | |
| AACCAAAAGCAAAACGTACA+AGG | + | chr3.3:1355048-1355067 | None:intergenic | 35.0% | |
| AAGAGCAAAAGGTTTAAGGA+GGG | - | chr3.3:1354107-1354126 | MS.gene058789:CDS | 35.0% | |
| ACTGAAGAGCAAAAGGTTTA+AGG | - | chr3.3:1354103-1354122 | MS.gene058789:CDS | 35.0% | |
| AGAAACGAGTATAGGAAAAC+CGG | + | chr3.3:1353984-1354003 | None:intergenic | 35.0% | |
| AGATCGAAGTCCTATTATAG+TGG | - | chr3.3:1352967-1352986 | MS.gene058789:CDS | 35.0% | |
| ATCAAATAACACTCTACCTG+AGG | - | chr3.3:1352599-1352618 | MS.gene058789:intron | 35.0% | |
| ATCGTAAGAGAGCAAAAAGA+TGG | + | chr3.3:1354884-1354903 | None:intergenic | 35.0% | |
| CAAACATGAGAAACGAGTAT+AGG | + | chr3.3:1353992-1354011 | None:intergenic | 35.0% | |
| CAATTTCTGAACCATCTCTT+AGG | - | chr3.3:1353706-1353725 | MS.gene058789:CDS | 35.0% | |
| CATTCCTCAATTGAAACTTG+TGG | - | chr3.3:1354200-1354219 | MS.gene058789:CDS | 35.0% | |
| CGACAAAACTGTTCATGAAA+AGG | - | chr3.3:1353486-1353505 | MS.gene058789:CDS | 35.0% | |
| CTAAGAGATGGTTCAGAAAT+TGG | + | chr3.3:1353708-1353727 | None:intergenic | 35.0% | |
| CTATACTCGTTTCTCATGTT+TGG | - | chr3.3:1353990-1354009 | MS.gene058789:intron | 35.0% | |
| GAACAGCTACCTGTAAATAA+AGG | + | chr3.3:1354146-1354165 | None:intergenic | 35.0% | |
| GATCCTGAAAGATATGATGA+TGG | + | chr3.3:1353381-1353400 | None:intergenic | 35.0% | |
| GGTAGTATGTGACTCTATAT+GGG | + | chr3.3:1353338-1353357 | None:intergenic | 35.0% | |
| GTATGTTGCGAGTATCATTA+AGG | + | chr3.3:1354043-1354062 | None:intergenic | 35.0% | |
| GTTATCATGATATGTGCTAG+GGG | + | chr3.3:1354658-1354677 | None:intergenic | 35.0% | |
| TAGCCATCATCATATCTTTC+AGG | - | chr3.3:1353375-1353394 | MS.gene058789:intron | 35.0% | |
| TATCTTCTTCAAGAAACCAG+AGG | + | chr3.3:1355125-1355144 | None:intergenic | 35.0% | |
| TCAGCAACTTGATTAATTGG+AGG | + | chr3.3:1354342-1354361 | None:intergenic | 35.0% | |
| TCGTCAGCAACTTGATTAAT+TGG | + | chr3.3:1354345-1354364 | None:intergenic | 35.0% | |
| TGGTAGTATGTGACTCTATA+TGG | + | chr3.3:1353339-1353358 | None:intergenic | 35.0% | |
| TTGTCGATATCCATATCTGT+TGG | + | chr3.3:1353472-1353491 | None:intergenic | 35.0% | |
| TTTCTCTTCCTTACTCTTTG+AGG | + | chr3.3:1353867-1353886 | None:intergenic | 35.0% | |
| ! | ACCTATTTGGTAACACTATG+GGG | + | chr3.3:1353905-1353924 | None:intergenic | 35.0% |
| ! | ATCCTTGTACGTTTTGCTTT+TGG | - | chr3.3:1355043-1355062 | MS.gene058789:CDS | 35.0% |
| ! | ATTTCAGGTGCATCAGTTAT+TGG | + | chr3.3:1354369-1354388 | None:intergenic | 35.0% |
| ! | ATTTTCAACAGCATCATTGG+AGG | + | chr3.3:1353446-1353465 | None:intergenic | 35.0% |
| ! | TCTTTTTGCTCTCTTACGAT+AGG | - | chr3.3:1354884-1354903 | MS.gene058789:intron | 35.0% |
| ! | TGGCAATGTCTGTTTTGTAA+CGG | + | chr3.3:1353404-1353423 | None:intergenic | 35.0% |
| ! | TTTGACCAGCCTTTATTTAC+AGG | - | chr3.3:1354134-1354153 | MS.gene058789:CDS | 35.0% |
| ! | TTTTCAACAGCATCATTGGA+GGG | + | chr3.3:1353445-1353464 | None:intergenic | 35.0% |
| !!! | AGAGTAAGCTTTGTTGGTTT+TGG | - | chr3.3:1353180-1353199 | MS.gene058789:CDS | 35.0% |
| ACAGAGTTCTACCCATCAAA+TGG | - | chr3.3:1353779-1353798 | MS.gene058789:CDS | 40.0% | |
| ACCCCATAGTGTTACCAAAT+AGG | - | chr3.3:1353901-1353920 | MS.gene058789:intron | 40.0% | |
| ACTCTTGCAGGTTAACTAAG+TGG | - | chr3.3:1352871-1352890 | MS.gene058789:intron | 40.0% | |
| AGAGGTCCTGCAATATAACA+AGG | + | chr3.3:1355107-1355126 | None:intergenic | 40.0% | |
| AGATAATCCCAAGTGCTTAC+AGG | - | chr3.3:1354529-1354548 | MS.gene058789:intron | 40.0% | |
| AGCTACCTGTAAATAAAGGC+TGG | + | chr3.3:1354142-1354161 | None:intergenic | 40.0% | |
| AGCTGACATCCTTAATGCAA+TGG | + | chr3.3:1352475-1352494 | None:intergenic | 40.0% | |
| ATGATACTCGCAACATACGA+CGG | - | chr3.3:1354045-1354064 | MS.gene058789:CDS | 40.0% | |
| ATTATCCGGATGATCTTCCT+CGG | + | chr3.3:1354307-1354326 | None:intergenic | 40.0% | |
| CAAGATGAGATTACTCTTGC+AGG | - | chr3.3:1352859-1352878 | MS.gene058789:intron | 40.0% | |
| CTACAACATATAGTTACGCC+CGG | - | chr3.3:1353962-1353981 | MS.gene058789:intron | 40.0% | |
| GAAACGAGTATAGGAAAACC+GGG | + | chr3.3:1353983-1354002 | None:intergenic | 40.0% | |
| GAAGAGCAAAAGGTTTAAGG+AGG | - | chr3.3:1354106-1354125 | MS.gene058789:CDS | 40.0% | |
| GAAGCCACAAGTTTCAATTG+AGG | + | chr3.3:1354207-1354226 | None:intergenic | 40.0% | |
| GCTATCGTCACTATTATGAC+TGG | + | chr3.3:1353359-1353378 | None:intergenic | 40.0% | |
| GCTGACATCCTTAATGCAAT+GGG | + | chr3.3:1352474-1352493 | None:intergenic | 40.0% | |
| GCTTACAGGAGTCCTAATAA+AGG | - | chr3.3:1354543-1354562 | MS.gene058789:intron | 40.0% | |
| GGCATGGTAATAGAATGAAC+CGG | + | chr3.3:1352639-1352658 | None:intergenic | 40.0% | |
| TACAAAACAGACATTGCCAC+CGG | - | chr3.3:1353405-1353424 | MS.gene058789:intron | 40.0% | |
| TACAGGAGTCCTAATAAAGG+AGG | - | chr3.3:1354546-1354565 | MS.gene058789:intron | 40.0% | |
| TACGAACAACACCTAAGAGT+AGG | + | chr3.3:1352500-1352519 | None:intergenic | 40.0% | |
| TGGATCTCAGGAATCATTTC+AGG | + | chr3.3:1353520-1353539 | None:intergenic | 40.0% | |
| TGTGACTCTATATGGGAACT+TGG | + | chr3.3:1353331-1353350 | None:intergenic | 40.0% | |
| TTAGGTATGAGGATGTTCAC+AGG | - | chr3.3:1352830-1352849 | MS.gene058789:intron | 40.0% | |
| TTCTGATGCAAGACCAAATG+AGG | - | chr3.3:1353156-1353175 | MS.gene058789:CDS | 40.0% | |
| TTGCTCTCTTACGATAGGTA+AGG | - | chr3.3:1354889-1354908 | MS.gene058789:intron | 40.0% | |
| TTGGTTGTGTCTTAGGTATG+AGG | - | chr3.3:1352819-1352838 | MS.gene058789:intron | 40.0% | |
| TTGTTATATTGCAGGACCTC+TGG | - | chr3.3:1355106-1355125 | MS.gene058789:CDS | 40.0% | |
| ! | CAGAGTCTTTGCTTTGAGTT+GGG | + | chr3.3:1354506-1354525 | None:intergenic | 40.0% |
| ! | GGCAATGTCTGTTTTGTAAC+GGG | + | chr3.3:1353403-1353422 | None:intergenic | 40.0% |
| ! | TCAGAGTCTTTGCTTTGAGT+TGG | + | chr3.3:1354507-1354526 | None:intergenic | 40.0% |
| ! | TGAGGAAGAGTAAGCTTTGT+TGG | - | chr3.3:1353174-1353193 | MS.gene058789:CDS | 40.0% |
| !! | TTTGCTTTGAGTTGGGATAG+TGG | + | chr3.3:1354499-1354518 | None:intergenic | 40.0% |
| !! | TTTGGTCTTGCATCAGAATC+TGG | + | chr3.3:1353154-1353173 | None:intergenic | 40.0% |
| AAGCGCATCAAGGTCAAAAG+TGG | + | chr3.3:1352664-1352683 | None:intergenic | 45.0% | |
| ACTCCTACTTCGGTTTCTGA+GGG | - | chr3.3:1354576-1354595 | MS.gene058789:intron | 45.0% | |
| AGCCTAAGTTAAGCGCATCA+AGG | + | chr3.3:1352674-1352693 | None:intergenic | 45.0% | |
| ATAGGACTTCGATCTGCACA+TGG | + | chr3.3:1352962-1352981 | None:intergenic | 45.0% | |
| ATCTCCGGTGCATCTGTTAT+TGG | + | chr3.3:1354441-1354460 | None:intergenic | 45.0% | |
| ATGTCAGCTCACCTACTCTT+AGG | - | chr3.3:1352486-1352505 | MS.gene058789:intron | 45.0% | |
| ATTCCCTCAGAAACCGAAGT+AGG | + | chr3.3:1354582-1354601 | None:intergenic | 45.0% | |
| CAAGATTGCAGTCGTTGAGA+AGG | + | chr3.3:1352545-1352564 | None:intergenic | 45.0% | |
| CATCAAATGGAGCAAGGACA+GGG | - | chr3.3:1353792-1353811 | MS.gene058789:CDS | 45.0% | |
| CATGGGAACTGAAGAGCAAA+AGG | - | chr3.3:1354096-1354115 | MS.gene058789:CDS | 45.0% | |
| CCTCAAATGGAGCAAAGACA+GGG | - | chr3.3:1353822-1353841 | MS.gene058789:CDS | 45.0% | |
| CCTGTCTTTGCTCCATTTGA+GGG | + | chr3.3:1353824-1353843 | None:intergenic | 45.0% | |
| CGGGCGTAACTATATGTTGT+AGG | + | chr3.3:1353964-1353983 | None:intergenic | 45.0% | |
| CGTACAAGGATATGTGTGCA+AGG | + | chr3.3:1355034-1355053 | None:intergenic | 45.0% | |
| CTGTCCTTGCTCCATTTGAT+GGG | + | chr3.3:1353793-1353812 | None:intergenic | 45.0% | |
| GACCTTGATGCGCTTAACTT+AGG | - | chr3.3:1352669-1352688 | MS.gene058789:intron | 45.0% | |
| GAGACAATGCGTTCAATCTC+CGG | + | chr3.3:1354456-1354475 | None:intergenic | 45.0% | |
| GAGGGAATGGAGATACCATA+CGG | - | chr3.3:1354594-1354613 | MS.gene058789:intron | 45.0% | |
| GGCTCATCAACAACGATTTC+AGG | + | chr3.3:1354420-1354439 | None:intergenic | 45.0% | |
| GTCGCAACACCTCCTTTATT+AGG | + | chr3.3:1354558-1354577 | None:intergenic | 45.0% | |
| TAGGACTCCTGTAAGCACTT+GGG | + | chr3.3:1354539-1354558 | None:intergenic | 45.0% | |
| TCAGATGGACAAGTTCATGG+AGG | - | chr3.3:1353604-1353623 | MS.gene058789:intron | 45.0% | |
| TCCATGAACTTGTCCATCTG+AGG | + | chr3.3:1353605-1353624 | None:intergenic | 45.0% | |
| TCTACCCATCAAATGGAGCA+AGG | - | chr3.3:1353786-1353805 | MS.gene058789:CDS | 45.0% | |
| TGAACATCCACTACCCTTGT+CGG | + | chr3.3:1353298-1353317 | None:intergenic | 45.0% | |
| TGAGCCAATAACAGATGCAC+CGG | - | chr3.3:1354434-1354453 | MS.gene058789:intron | 45.0% | |
| TGTGCATTTGAAGGACTGGA+TGG | + | chr3.3:1353124-1353143 | None:intergenic | 45.0% | |
| TGTGGCTATACGTTTCGATG+AGG | - | chr3.3:1352997-1353016 | MS.gene058789:CDS | 45.0% | |
| TTAGGACTCCTGTAAGCACT+TGG | + | chr3.3:1354540-1354559 | None:intergenic | 45.0% | |
| ! | TACTTCGGTTTCTGAGGGAA+TGG | - | chr3.3:1354581-1354600 | MS.gene058789:intron | 45.0% |
| !! | AGGGTAGTGGATGTTCAAGA+TGG | - | chr3.3:1353301-1353320 | MS.gene058789:CDS | 45.0% |
| !! | GTAGTGGATGTTCAAGATGG+TGG | - | chr3.3:1353304-1353323 | MS.gene058789:CDS | 45.0% |
| AAGGTCAAAAGTGGCTGGCA+TGG | + | chr3.3:1352655-1352674 | None:intergenic | 50.0% | |
| AATGGAGCAAAGACAGGGTC+AGG | - | chr3.3:1353827-1353846 | MS.gene058789:CDS | 50.0% | |
| ACTCCAGATGCTTCTCATGG+TGG | - | chr3.3:1353577-1353596 | MS.gene058789:intron | 50.0% | |
| CAAAGACAGGGTCAGGATCA+GGG | - | chr3.3:1353834-1353853 | MS.gene058789:CDS | 50.0% | |
| CAACATACGACGGAAGCGAA+AGG | - | chr3.3:1354055-1354074 | MS.gene058789:CDS | 50.0% | |
| CATCTCCGAGGAAGATCATC+CGG | - | chr3.3:1354299-1354318 | MS.gene058789:CDS | 50.0% | |
| CCAACTCCAGATGCTTCTCA+TGG | - | chr3.3:1353574-1353593 | MS.gene058789:CDS | 50.0% | |
| CCATCAAATGGAGCAAGGAC+AGG | - | chr3.3:1353791-1353810 | MS.gene058789:CDS | 50.0% | |
| CCCTCAAATGGAGCAAAGAC+AGG | - | chr3.3:1353821-1353840 | MS.gene058789:CDS | 50.0% | |
| CCCTGTCTTTGCTCCATTTG+AGG | + | chr3.3:1353825-1353844 | None:intergenic | 50.0% | |
| CCTGTCCTTGCTCCATTTGA+TGG | + | chr3.3:1353794-1353813 | None:intergenic | 50.0% | |
| CGAAAGGACGTCACTGCTTT+GGG | - | chr3.3:1354071-1354090 | MS.gene058789:CDS | 50.0% | |
| CGAGCTCATGCATCAGAAAC+TGG | - | chr3.3:1354630-1354649 | MS.gene058789:CDS | 50.0% | |
| CGGTTGTGCATTTGAAGGAC+TGG | + | chr3.3:1353128-1353147 | None:intergenic | 50.0% | |
| CTGGGGTTCCCATTGCATTA+AGG | - | chr3.3:1352463-1352482 | MS.gene058789:CDS | 50.0% | |
| CTTAATGCAATGGGAACCCC+AGG | + | chr3.3:1352465-1352484 | None:intergenic | 50.0% | |
| CTTGCATCAGAATCTGGTGG+CGG | + | chr3.3:1353148-1353167 | None:intergenic | 50.0% | |
| CTTTGCTCCATTTGAGGGAC+AGG | + | chr3.3:1353819-1353838 | None:intergenic | 50.0% | |
| GACTCCTACTTCGGTTTCTG+AGG | - | chr3.3:1354575-1354594 | MS.gene058789:intron | 50.0% | |
| GATGCTTCCTACCCCTCAAA+TGG | - | chr3.3:1353749-1353768 | MS.gene058789:CDS | 50.0% | |
| GCATCAAGGTCAAAAGTGGC+TGG | + | chr3.3:1352660-1352679 | None:intergenic | 50.0% | |
| GCCTCAGATGGACAAGTTCA+TGG | - | chr3.3:1353601-1353620 | MS.gene058789:intron | 50.0% | |
| GGCTCGTCAACAGCAATTTC+AGG | + | chr3.3:1354384-1354403 | None:intergenic | 50.0% | |
| GGTATGAGGATGTTCACAGG+AGG | - | chr3.3:1352833-1352852 | MS.gene058789:intron | 50.0% | |
| GGTCTTGCATCAGAATCTGG+TGG | + | chr3.3:1353151-1353170 | None:intergenic | 50.0% | |
| GTGAGAGGCCTCAAAGAGTA+AGG | - | chr3.3:1353856-1353875 | MS.gene058789:CDS | 50.0% | |
| GTGGTCTAGCTGGTTGAGTT+GGG | + | chr3.3:1353555-1353574 | None:intergenic | 50.0% | |
| GTGTGCAAGGTAGAACATGC+AGG | + | chr3.3:1355021-1355040 | None:intergenic | 50.0% | |
| GTTTCTGATGCATGAGCTCG+AGG | + | chr3.3:1354630-1354649 | None:intergenic | 50.0% | |
| TACCCTTGTCGGTGGAGATT+GGG | + | chr3.3:1353287-1353306 | None:intergenic | 50.0% | |
| TCTGTCCCTGCTCCATTTGA+GGG | + | chr3.3:1353764-1353783 | None:intergenic | 50.0% | |
| ! | AGGTGTTGCGACTCCTACTT+CGG | - | chr3.3:1354566-1354585 | MS.gene058789:intron | 50.0% |
| ! | TGGTCTAGCTGGTTGAGTTG+GGG | + | chr3.3:1353554-1353573 | None:intergenic | 50.0% |
| !! | CCATGAGAAGCATCTGGAGT+TGG | + | chr3.3:1353577-1353596 | None:intergenic | 50.0% |
| !! | CTTTGAGTTGGGATAGTGGC+AGG | + | chr3.3:1354495-1354514 | None:intergenic | 50.0% |
| !! | TGAGAAGCATCTGGAGTTGG+TGG | + | chr3.3:1353574-1353593 | None:intergenic | 50.0% |
| ACACTCTACCTGAGGATGCG+AGG | - | chr3.3:1352607-1352626 | MS.gene058789:intron | 55.0% | |
| ACAGGGTCCTGTCCCTCAAA+TGG | - | chr3.3:1353809-1353828 | MS.gene058789:CDS | 55.0% | |
| ACATCCACTACCCTTGTCGG+TGG | + | chr3.3:1353295-1353314 | None:intergenic | 55.0% | |
| ACCCTTGTCGGTGGAGATTG+GGG | + | chr3.3:1353286-1353305 | None:intergenic | 55.0% | |
| ACCTCACTTGGTCATCTCCG+AGG | - | chr3.3:1354287-1354306 | MS.gene058789:CDS | 55.0% | |
| ATCTCCACCGACAAGGGTAG+TGG | - | chr3.3:1353288-1353307 | MS.gene058789:CDS | 55.0% | |
| ATGGGAACCCCAGGATCCAT+TGG | + | chr3.3:1352456-1352475 | None:intergenic | 55.0% | |
| CCTACCCCTCAAATGGAGCA+GGG | - | chr3.3:1353756-1353775 | MS.gene058789:CDS | 55.0% | |
| CGAGGTGATGTTGCACCGTA+TGG | + | chr3.3:1354612-1354631 | None:intergenic | 55.0% | |
| CTACCCTTGTCGGTGGAGAT+TGG | + | chr3.3:1353288-1353307 | None:intergenic | 55.0% | |
| CTCTGTCCCTGCTCCATTTG+AGG | + | chr3.3:1353765-1353784 | None:intergenic | 55.0% | |
| CTGTCCCTGCTCCATTTGAG+GGG | + | chr3.3:1353763-1353782 | None:intergenic | 55.0% | |
| GCAAAGACAGGGTCAGGATC+AGG | - | chr3.3:1353833-1353852 | MS.gene058789:CDS | 55.0% | |
| GCGAAAGGACGTCACTGCTT+TGG | - | chr3.3:1354070-1354089 | MS.gene058789:CDS | 55.0% | |
| GGCAGGCTGATCATCAGCAA+CGG | + | chr3.3:1354478-1354497 | None:intergenic | 55.0% | |
| GGGGTTTCAGCATGGATCTC+AGG | + | chr3.3:1353532-1353551 | None:intergenic | 55.0% | |
| GGTGGTCTAGCTGGTTGAGT+TGG | + | chr3.3:1353556-1353575 | None:intergenic | 55.0% | |
| TCCCCAATCTCCACCGACAA+GGG | - | chr3.3:1353282-1353301 | MS.gene058789:CDS | 55.0% | |
| TCCTACCCCTCAAATGGAGC+AGG | - | chr3.3:1353755-1353774 | MS.gene058789:CDS | 55.0% | |
| TCCTCGGAGATGACCAAGTG+AGG | + | chr3.3:1354291-1354310 | None:intergenic | 55.0% | |
| TTCCCCAATCTCCACCGACA+AGG | - | chr3.3:1353281-1353300 | MS.gene058789:CDS | 55.0% | |
| ! | GGTGGCGGTTGTGCATTTGA+AGG | + | chr3.3:1353133-1353152 | None:intergenic | 55.0% |
| !! | GGTCTAGCTGGTTGAGTTGG+GGG | + | chr3.3:1353553-1353572 | None:intergenic | 55.0% |
| !! | GTCTAGCTGGTTGAGTTGGG+GGG | + | chr3.3:1353552-1353571 | None:intergenic | 55.0% |
| !! | TCTAGCTGGTTGAGTTGGGG+GGG | + | chr3.3:1353551-1353570 | None:intergenic | 55.0% |
| !! | TCTGGAGTTGGTGGTCTAGC+TGG | + | chr3.3:1353565-1353584 | None:intergenic | 55.0% |
| AGGGTCAGGATCAGGGTGAG+AGG | - | chr3.3:1353841-1353860 | MS.gene058789:CDS | 60.0% | |
| CCCTGCTCCATTTGAGGGGT+AGG | + | chr3.3:1353759-1353778 | None:intergenic | 60.0% | |
| GAGGGATCGCGAAGAGCTTC+CGG | + | chr3.3:1353427-1353446 | None:intergenic | 60.0% | |
| GAGTTGGGGGGGTTTCAGCA+TGG | + | chr3.3:1353540-1353559 | None:intergenic | 60.0% | |
| TGAGGATGCGAGGCAAGCAC+CGG | - | chr3.3:1352617-1352636 | MS.gene058789:intron | 60.0% | |
| ! | ACGTCACTGCTTTGGGCGCA+TGG | - | chr3.3:1354078-1354097 | MS.gene058789:CDS | 60.0% |
| ! | CGTCACTGCTTTGGGCGCAT+GGG | - | chr3.3:1354079-1354098 | MS.gene058789:CDS | 60.0% |
| ! | TCTCATGGTGGCGCCTCAGA+TGG | - | chr3.3:1353589-1353608 | MS.gene058789:intron | 60.0% |
| !! | GCGCCACCATGAGAAGCATC+TGG | + | chr3.3:1353583-1353602 | None:intergenic | 60.0% |
| GGATCGCGAAGAGCTTCCGG+TGG | + | chr3.3:1353424-1353443 | None:intergenic | 65.0% | |
| GGTGCTTGCCTCGCATCCTC+AGG | + | chr3.3:1352618-1352637 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 1352456 | 1355162 | 1352456 | ID=MS.gene058789 |
| chr3.3 | mRNA | 1352456 | 1355162 | 1352456 | ID=MS.gene058789.t1;Parent=MS.gene058789 |
| chr3.3 | exon | 1354906 | 1355162 | 1354906 | ID=MS.gene058789.t1.exon1;Parent=MS.gene058789.t1 |
| chr3.3 | CDS | 1354906 | 1355162 | 1354906 | ID=cds.MS.gene058789.t1;Parent=MS.gene058789.t1 |
| chr3.3 | exon | 1354738 | 1354784 | 1354738 | ID=MS.gene058789.t1.exon2;Parent=MS.gene058789.t1 |
| chr3.3 | CDS | 1354738 | 1354784 | 1354738 | ID=cds.MS.gene058789.t1;Parent=MS.gene058789.t1 |
| chr3.3 | exon | 1354600 | 1354649 | 1354600 | ID=MS.gene058789.t1.exon3;Parent=MS.gene058789.t1 |
| chr3.3 | CDS | 1354600 | 1354649 | 1354600 | ID=cds.MS.gene058789.t1;Parent=MS.gene058789.t1 |
| chr3.3 | exon | 1354436 | 1354503 | 1354436 | ID=MS.gene058789.t1.exon4;Parent=MS.gene058789.t1 |
| chr3.3 | CDS | 1354436 | 1354503 | 1354436 | ID=cds.MS.gene058789.t1;Parent=MS.gene058789.t1 |
| chr3.3 | exon | 1353993 | 1354342 | 1353993 | ID=MS.gene058789.t1.exon5;Parent=MS.gene058789.t1 |
| chr3.3 | CDS | 1353993 | 1354342 | 1353993 | ID=cds.MS.gene058789.t1;Parent=MS.gene058789.t1 |
| chr3.3 | exon | 1353696 | 1353915 | 1353696 | ID=MS.gene058789.t1.exon6;Parent=MS.gene058789.t1 |
| chr3.3 | CDS | 1353696 | 1353915 | 1353696 | ID=cds.MS.gene058789.t1;Parent=MS.gene058789.t1 |
| chr3.3 | exon | 1353463 | 1353593 | 1353463 | ID=MS.gene058789.t1.exon7;Parent=MS.gene058789.t1 |
| chr3.3 | CDS | 1353463 | 1353593 | 1353463 | ID=cds.MS.gene058789.t1;Parent=MS.gene058789.t1 |
| chr3.3 | exon | 1352881 | 1353383 | 1352881 | ID=MS.gene058789.t1.exon8;Parent=MS.gene058789.t1 |
| chr3.3 | CDS | 1352881 | 1353383 | 1352881 | ID=cds.MS.gene058789.t1;Parent=MS.gene058789.t1 |
| chr3.3 | exon | 1352456 | 1352498 | 1352456 | ID=MS.gene058789.t1.exon9;Parent=MS.gene058789.t1 |
| chr3.3 | CDS | 1352456 | 1352498 | 1352456 | ID=cds.MS.gene058789.t1;Parent=MS.gene058789.t1 |
| Gene Sequence |
| Protein sequence |
