Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene041346.t1 | XP_003590411.2 | 92.7 | 606 | 37 | 2 | 1 | 604 | 5 | 605 | 0.00E+00 | 1105.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene041346.t1 | Q9ZSS6 | 73.1 | 591 | 154 | 2 | 14 | 604 | 7 | 592 | 5.7e-245 | 848.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene041346.t1 | G7I9D6 | 92.7 | 606 | 37 | 2 | 1 | 604 | 5 | 605 | 0.0e+00 | 1105.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene041346 | MS.gene92155 | PPI |
MS.gene039012 | MS.gene041346 | PPI |
MS.gene77617 | MS.gene041346 | PPI |
MS.gene041346 | MS.gene073967 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene041346.t1 | MTR_1g061800 | 96.370 | 606 | 15 | 2 | 1 | 604 | 5 | 605 | 0.0 | 1204 |
MS.gene041346.t1 | MTR_8g098460 | 29.677 | 310 | 199 | 5 | 114 | 413 | 24 | 324 | 8.85e-36 | 137 |
MS.gene041346.t1 | MTR_7g103510 | 29.545 | 308 | 202 | 6 | 114 | 413 | 18 | 318 | 4.19e-32 | 127 |
MS.gene041346.t1 | MTR_0681s0020 | 31.879 | 298 | 188 | 7 | 120 | 412 | 28 | 315 | 4.58e-21 | 99.0 |
MS.gene041346.t1 | MTR_1g056740 | 28.931 | 159 | 112 | 1 | 123 | 281 | 29 | 186 | 7.06e-18 | 82.8 |
MS.gene041346.t1 | MTR_4g087510 | 29.319 | 191 | 113 | 6 | 138 | 313 | 72 | 255 | 9.68e-11 | 64.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene041346.t1 | AT3G10050 | 78.195 | 532 | 115 | 1 | 73 | 604 | 62 | 592 | 0.0 | 824 |
MS.gene041346.t1 | AT4G11640 | 31.250 | 304 | 190 | 4 | 123 | 416 | 29 | 323 | 9.65e-32 | 126 |
Find 177 sgRNAs with CRISPR-Local
Find 350 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGTTCACAGGTGAAGATAAT+TGG | 0.190938 | 1.2:-47117007 | MS.gene041346:intron |
ATCAAAGCACCAGGTCTTTC+TGG | 0.204169 | 1.2:+47114687 | None:intergenic |
AGAAAGCTGTTGTTCTTTAC+AGG | 0.220056 | 1.2:-47115381 | MS.gene041346:intron |
GAAGCATACTGCAAGTATTA+TGG | 0.220669 | 1.2:-47115698 | MS.gene041346:CDS |
TCATGGCCAAAGAGTGGTTT+TGG | 0.273388 | 1.2:-47116942 | MS.gene041346:CDS |
GCAGGCGCTCTTGCTCTTGC+TGG | 0.290001 | 1.2:-47115725 | MS.gene041346:CDS |
TGATCATCCCGATGTCATTA+TGG | 0.291301 | 1.2:-47117256 | MS.gene041346:CDS |
GGTGCTACTGTGGTCCTTAT+TGG | 0.302177 | 1.2:-47117354 | MS.gene041346:CDS |
TAAACTTCCAAAGGATGTTT+TGG | 0.314115 | 1.2:-47117740 | MS.gene041346:CDS |
GACTAGTATACTTACTTCTA+AGG | 0.323743 | 1.2:-47118514 | MS.gene041346:CDS |
CCTTTCTCCAAAACATCCTT+TGG | 0.326655 | 1.2:+47117733 | None:intergenic |
GGAGGTGGTGGTCTCATTGC+TGG | 0.328700 | 1.2:-47117162 | MS.gene041346:CDS |
AAATGTATTAGTTGGAATTC+AGG | 0.343393 | 1.2:-47114474 | MS.gene041346:CDS |
AATGGTTTGAAACGAGGGTT+AGG | 0.357051 | 1.2:+47118738 | None:intergenic |
GATCATCCCGATGTCATTAT+GGG | 0.362274 | 1.2:-47117255 | MS.gene041346:CDS |
GTTCACAGGTGAAGATAATT+GGG | 0.369464 | 1.2:-47117006 | MS.gene041346:intron |
ACAGACTTGGTGTTAATGTT+TGG | 0.380123 | 1.2:-47118440 | MS.gene041346:CDS |
TTCTAACCTGTGCACGGTAA+TGG | 0.384917 | 1.2:+47114619 | None:intergenic |
CATGAACCGGACGCTTCATC+TGG | 0.385719 | 1.2:+47117202 | None:intergenic |
TTGTGGCTGTGAGGTGGTGG+AGG | 0.386201 | 1.2:+47118815 | None:intergenic |
TGTTGAATCACCTCTTGAAT+TGG | 0.388453 | 1.2:-47118478 | MS.gene041346:CDS |
CATCATAGGAATCTCCAATA+AGG | 0.388925 | 1.2:+47117340 | None:intergenic |
AGAAACCATTTCAACAGGTT+TGG | 0.392333 | 1.2:+47118689 | None:intergenic |
AACGATCGTGCCACCGGACT+TGG | 0.396780 | 1.2:-47114425 | MS.gene041346:CDS |
AAGCATACTGCAAGTATTAT+GGG | 0.401264 | 1.2:-47115697 | MS.gene041346:CDS |
TGCAATTTGTGCATCGATAA+AGG | 0.407203 | 1.2:-47116813 | MS.gene041346:intron |
AGGTTGTGGCTGTGAGGTGG+TGG | 0.410266 | 1.2:+47118812 | None:intergenic |
GGAGCAGAAACCATTTCAAC+AGG | 0.411164 | 1.2:+47118684 | None:intergenic |
TCCCGATGTCATTATGGGTC+AGG | 0.412631 | 1.2:-47117250 | MS.gene041346:CDS |
AGAACCTCATTCTGAATATC+AGG | 0.417812 | 1.2:+47114726 | None:intergenic |
AGTCTCCAAACCTGTTGAAA+TGG | 0.422820 | 1.2:-47118694 | MS.gene041346:CDS |
TTGATGTCAGGAGTGGTAAC+TGG | 0.423089 | 1.2:+47117625 | None:intergenic |
GCGGCGGTGGTTGTTATGAA+TGG | 0.423932 | 1.2:+47118720 | None:intergenic |
CCTGGTCCAAAACCACTCTT+TGG | 0.424183 | 1.2:+47116936 | None:intergenic |
GGCGGCTCCTCCGAGGTTGA+AGG | 0.426236 | 1.2:-47118643 | MS.gene041346:CDS |
ATATGCTTGTGCTTCATCAT+AGG | 0.431422 | 1.2:+47117326 | None:intergenic |
ACATGAATTTCGATAAACTT+AGG | 0.431536 | 1.2:-47115634 | MS.gene041346:CDS |
GGCGTTGCAATTCAATCTCT+TGG | 0.433590 | 1.2:+47117660 | None:intergenic |
TGGCTGTGAGGTGGTGGAGG+AGG | 0.441082 | 1.2:+47118818 | None:intergenic |
GGCACAAAGATTGCATGAAC+CGG | 0.443581 | 1.2:+47117189 | None:intergenic |
GCATTAAAAGCTTGAAGAAA+AGG | 0.446362 | 1.2:+47114375 | None:intergenic |
TTTGGAGACTGCGGCGGCGG+TGG | 0.446726 | 1.2:+47118707 | None:intergenic |
AATTCCTCCATCTCGCTGCT+TGG | 0.448041 | 1.2:+47114449 | None:intergenic |
TGCTTCGGACAGGGTGAAGC+TGG | 0.448565 | 1.2:-47114500 | MS.gene041346:intron |
TTTGTGCCTGTGGGAGGTGG+TGG | 0.459179 | 1.2:-47117174 | MS.gene041346:CDS |
GCTGGAGCAAATGTATTAGT+TGG | 0.462032 | 1.2:-47114482 | MS.gene041346:CDS |
TGCTAAGAAGCGTGCTATAG+AGG | 0.467092 | 1.2:-47117304 | MS.gene041346:CDS |
GCATTCTGTGACGGTGGTTA+CGG | 0.467805 | 1.2:+47118778 | None:intergenic |
AAAAGAAATGCAGGAGAGAA+TGG | 0.468861 | 1.2:-47115119 | MS.gene041346:CDS |
ATCTTTGTGCCTGTGGGAGG+TGG | 0.470012 | 1.2:-47117177 | MS.gene041346:CDS |
GGTAACTGGCATTGCAATAA+CGG | 0.476308 | 1.2:+47117639 | None:intergenic |
TAAATGAATACCTTGATGTC+AGG | 0.478406 | 1.2:+47117613 | None:intergenic |
AGGTTTGGAGACTGCGGCGG+CGG | 0.484831 | 1.2:+47118704 | None:intergenic |
CTCATTCTGAATATCAGGTC+GGG | 0.484844 | 1.2:+47114731 | None:intergenic |
AAGAACAACAGCTTTCTCCT+TGG | 0.486008 | 1.2:+47115387 | None:intergenic |
ATCGAAATTCATGTTTGCTC+CGG | 0.486984 | 1.2:+47115643 | None:intergenic |
ACTGTCATGCCGGAGGAGCC+TGG | 0.487185 | 1.2:-47115560 | MS.gene041346:CDS |
CCCTGACCCATAATGACATC+GGG | 0.487914 | 1.2:+47117249 | None:intergenic |
CAATCTCTCAGACGTTGACT+TGG | 0.492337 | 1.2:-47115074 | MS.gene041346:CDS |
CCAAGTCTGTCAGAAAGCTT+TGG | 0.493609 | 1.2:+47118453 | None:intergenic |
ATGACATCGGGATGATCAAA+AGG | 0.497200 | 1.2:+47117261 | None:intergenic |
CCAAAGCTTTCTGACAGACT+TGG | 0.500138 | 1.2:-47118453 | MS.gene041346:CDS |
GGTGGATACTGAAGTGAATC+CGG | 0.500821 | 1.2:+47118615 | None:intergenic |
AGCCAATGCATTTGCATCAG+TGG | 0.500969 | 1.2:+47116976 | None:intergenic |
TTGAAACTGCCAGGCTCCTC+CGG | 0.501285 | 1.2:+47115551 | None:intergenic |
TTTATTCCATTACCGTGCAC+AGG | 0.503763 | 1.2:-47114625 | MS.gene041346:intron |
CTTGTTGCAGGACATGTTTG+AGG | 0.504713 | 1.2:-47115771 | MS.gene041346:intron |
GCAAGAGCAAGAGCGCCTGC+TGG | 0.505562 | 1.2:+47115728 | None:intergenic |
GCCAATGCATTTGCATCAGT+GGG | 0.508903 | 1.2:+47116977 | None:intergenic |
TCACCACCACGTGTCCTGTC+AGG | 0.510048 | 1.2:+47118573 | None:intergenic |
GATATTCCATCGTGGACTAA+AGG | 0.510605 | 1.2:+47114650 | None:intergenic |
CTGCAAGTATTATGGGCTCA+AGG | 0.511597 | 1.2:-47115690 | MS.gene041346:CDS |
TCCGGCGAAACCTTCAACCT+CGG | 0.516696 | 1.2:+47118633 | None:intergenic |
TTTCCGCTTGTGCAAGGAGT+TGG | 0.517649 | 1.2:-47116864 | MS.gene041346:CDS |
CAAAACTGTTTGAAACTGCC+AGG | 0.518258 | 1.2:+47115542 | None:intergenic |
ATGGTTTGAAACGAGGGTTA+GGG | 0.519460 | 1.2:+47118739 | None:intergenic |
TTGGCTTTGTCACTTCATCA+TGG | 0.519786 | 1.2:-47116959 | MS.gene041346:CDS |
ATGAGGTTGTGGCTGTGAGG+TGG | 0.523810 | 1.2:+47118809 | None:intergenic |
GGTGGTGATGAAGGTGATTG+TGG | 0.525787 | 1.2:-47118558 | MS.gene041346:CDS |
CCGTGGAGCTTATAATATGA+TGG | 0.527606 | 1.2:-47117764 | MS.gene041346:CDS |
CATGCAATCTTTGTGCCTGT+GGG | 0.530831 | 1.2:-47117183 | MS.gene041346:CDS |
ACGTTGGAGCGGTTCCTGAC+AGG | 0.531537 | 1.2:-47118587 | MS.gene041346:CDS |
GTGGAAATCTGTGGAGAGGT+GGG | 0.532704 | 1.2:-47117376 | MS.gene041346:CDS |
TGCAAGTATTATGGGCTCAA+GGG | 0.532844 | 1.2:-47115689 | MS.gene041346:CDS |
GAAATTCATGTTTGCTCCGG+AGG | 0.534000 | 1.2:+47115646 | None:intergenic |
ATTATGGGTCAGGGAACTGT+CGG | 0.534240 | 1.2:-47117240 | MS.gene041346:CDS |
GGGGTTATATGCTCTTCAGC+TGG | 0.534738 | 1.2:-47117712 | MS.gene041346:CDS |
TGTGACGGTGGTTACGGAGG+AGG | 0.538450 | 1.2:+47118784 | None:intergenic |
AACCTCGGAGGAGCCGCCGC+CGG | 0.538460 | 1.2:+47118648 | None:intergenic |
CTTAGAACTAAAAGAAATGC+AGG | 0.539142 | 1.2:-47115128 | MS.gene041346:CDS |
TCATGCAATCTTTGTGCCTG+TGG | 0.541247 | 1.2:-47117184 | MS.gene041346:CDS |
GCCGCCGGTGACTCAACAAA+AGG | 0.541887 | 1.2:+47118663 | None:intergenic |
TTATGAATGGTTTGAAACGA+GGG | 0.543995 | 1.2:+47118733 | None:intergenic |
TCCGAGGTTGAAGGTTTCGC+CGG | 0.547453 | 1.2:-47118634 | MS.gene041346:CDS |
CCCGATGTCATTATGGGTCA+GGG | 0.549015 | 1.2:-47117249 | MS.gene041346:CDS |
CTACCAACTCCTTGCACAAG+CGG | 0.552453 | 1.2:+47116861 | None:intergenic |
TTGTGCAAGGAGTTGGTAGA+TGG | 0.553314 | 1.2:-47116857 | MS.gene041346:CDS |
TTATGGGTCAGGGAACTGTC+GGG | 0.553513 | 1.2:-47117239 | MS.gene041346:CDS |
AGTTACCACTCCTGACATCA+AGG | 0.554442 | 1.2:-47117623 | MS.gene041346:intron |
CGGAGGAGGAGATGAGGTTG+TGG | 0.554510 | 1.2:+47118798 | None:intergenic |
TCAGGTTCCAAGCAGCGAGA+TGG | 0.557536 | 1.2:-47114456 | MS.gene041346:CDS |
ATTATAGTCATACCCAAGTC+CGG | 0.560339 | 1.2:+47114412 | None:intergenic |
ACGATCGTGCCACCGGACTT+GGG | 0.560800 | 1.2:-47114424 | MS.gene041346:CDS |
GGAAACTTTCCGCTTGTGCA+AGG | 0.561388 | 1.2:-47116870 | MS.gene041346:CDS |
GTATTCTCATTTAAGATCCG+TGG | 0.561595 | 1.2:-47117781 | MS.gene041346:CDS |
GAATTCAACGATCGTGCCAC+CGG | 0.562341 | 1.2:-47114431 | MS.gene041346:CDS |
AGTGGAAATCTGTGGAGAGG+TGG | 0.565711 | 1.2:-47117377 | MS.gene041346:CDS |
GGAGAGGTGGGGTGCTACTG+TGG | 0.565931 | 1.2:-47117364 | MS.gene041346:CDS |
ATTCAATCTCTTGGCAGACA+TGG | 0.567316 | 1.2:+47117669 | None:intergenic |
CAGGTTGGAGGATTTGCAGA+TGG | 0.569395 | 1.2:-47116917 | MS.gene041346:CDS |
GGAAAATCGTAGCGCCTCCA+TGG | 0.570016 | 1.2:+47118839 | None:intergenic |
TCTGCTGTTAACTGTCATGC+CGG | 0.572842 | 1.2:-47115570 | MS.gene041346:CDS |
GAGATGAGGTTGTGGCTGTG+AGG | 0.575781 | 1.2:+47118806 | None:intergenic |
CCGACCTGATATTCAGAATG+AGG | 0.577734 | 1.2:-47114730 | MS.gene041346:CDS |
AGCACCAGGTCTTTCTGGAA+AGG | 0.579418 | 1.2:+47114692 | None:intergenic |
GGGTCAGGGAACTGTCGGGA+TGG | 0.580900 | 1.2:-47117235 | MS.gene041346:CDS |
GGAACCGCTCCAACGTAACC+AGG | 0.581487 | 1.2:+47118594 | None:intergenic |
AGGACACGTGGTGGTGATGA+AGG | 0.582103 | 1.2:-47118567 | MS.gene041346:CDS |
TTCAACAGGTTTGGAGACTG+CGG | 0.582478 | 1.2:+47118698 | None:intergenic |
TCAGCTGGAAATCATGCTCA+AGG | 0.584823 | 1.2:-47117697 | MS.gene041346:CDS |
TGTGGTGCATTCTGTGACGG+TGG | 0.586258 | 1.2:+47118772 | None:intergenic |
AGGAGCATATTGGAACCAGC+AGG | 0.586301 | 1.2:-47115743 | MS.gene041346:CDS |
TGTGCGCCAGATGAAGCGTC+CGG | 0.588360 | 1.2:-47117208 | MS.gene041346:CDS |
ACCTTTGCAGTGGAAATCTG+TGG | 0.590239 | 1.2:-47117385 | MS.gene041346:intron |
TATGATGGCTAAACTTCCAA+AGG | 0.590661 | 1.2:-47117749 | MS.gene041346:CDS |
GCAAGTATTATGGGCTCAAG+GGG | 0.590691 | 1.2:-47115688 | MS.gene041346:CDS |
CACCGGCGGCGGCTCCTCCG+AGG | 0.591335 | 1.2:-47118650 | MS.gene041346:CDS |
GTTATGAATGGTTTGAAACG+AGG | 0.592217 | 1.2:+47118732 | None:intergenic |
CAGTATCCACCTGGTTACGT+TGG | 0.593210 | 1.2:-47118603 | MS.gene041346:CDS |
AGCTTTGGCGCCAATTCAAG+AGG | 0.594505 | 1.2:+47118468 | None:intergenic |
TTCTGTGACGGTGGTTACGG+AGG | 0.596110 | 1.2:+47118781 | None:intergenic |
GCAATCTTTGTGCCTGTGGG+AGG | 0.596806 | 1.2:-47117180 | MS.gene041346:CDS |
ACCCACTGATGCAAATGCAT+TGG | 0.597685 | 1.2:-47116978 | MS.gene041346:CDS |
GGTTCCAAGCAGCGAGATGG+AGG | 0.598270 | 1.2:-47114453 | MS.gene041346:CDS |
AATGTTATAGCAATAACCTC+CGG | 0.600808 | 1.2:-47115662 | MS.gene041346:CDS |
TGGAGGATTTGCAGATGGTG+TGG | 0.601430 | 1.2:-47116912 | MS.gene041346:CDS |
GATTGTGGAGTAAGTGCTAT+GGG | 0.606504 | 1.2:-47118543 | MS.gene041346:CDS |
ACTTCATCATGGCCAAAGAG+TGG | 0.606993 | 1.2:-47116948 | MS.gene041346:CDS |
ATTTATCATCTTCACGTAAG+CGG | 0.608677 | 1.2:+47117134 | None:intergenic |
TCCCTGACCCATAATGACAT+CGG | 0.610285 | 1.2:+47117248 | None:intergenic |
CCTCATTCTGAATATCAGGT+CGG | 0.611117 | 1.2:+47114730 | None:intergenic |
TGATTGTGGAGTAAGTGCTA+TGG | 0.611156 | 1.2:-47118544 | MS.gene041346:CDS |
CAAATACAGATATAGTTCCA+AGG | 0.611281 | 1.2:-47115404 | MS.gene041346:CDS |
TCCACCTGGTTACGTTGGAG+CGG | 0.612380 | 1.2:-47118598 | MS.gene041346:CDS |
GTAACTGAACTTGCTAATGT+CGG | 0.613762 | 1.2:-47115608 | MS.gene041346:CDS |
CCATCATATTATAAGCTCCA+CGG | 0.615666 | 1.2:+47117764 | None:intergenic |
CATCTGCAAATCCTCCAACC+TGG | 0.616040 | 1.2:+47116918 | None:intergenic |
GAAAGATCATTTGCGTCACA+TGG | 0.617461 | 1.2:-47115050 | MS.gene041346:intron |
TGCAAATTCTAACCTGTGCA+CGG | 0.621586 | 1.2:+47114613 | None:intergenic |
TCGATGCACAAATTGCATCA+CGG | 0.623238 | 1.2:+47116819 | None:intergenic |
TTTACCTTTCCAGAAAGACC+TGG | 0.624311 | 1.2:-47114696 | MS.gene041346:CDS |
ATGAGACCACCACCTCCCAC+AGG | 0.625201 | 1.2:+47117168 | None:intergenic |
GATTCACTTCAGTATCCACC+TGG | 0.627666 | 1.2:-47118612 | MS.gene041346:CDS |
AGATGGTGTGGCTGTAAAAG+AGG | 0.629062 | 1.2:-47116900 | MS.gene041346:CDS |
CGTGAAGATGATAAATCCAG+AGG | 0.630349 | 1.2:-47117127 | MS.gene041346:intron |
TAGACTCCTTTAGTCCACGA+TGG | 0.634604 | 1.2:-47114656 | MS.gene041346:CDS |
GGCTGTAAAAGAGGTTGGCG+AGG | 0.636934 | 1.2:-47116891 | MS.gene041346:CDS |
GGTGTGGCTGTAAAAGAGGT+TGG | 0.638381 | 1.2:-47116896 | MS.gene041346:CDS |
AACAGGTTTGGAGACTGCGG+CGG | 0.640333 | 1.2:+47118701 | None:intergenic |
TGGAAATCTGTGGAGAGGTG+GGG | 0.641456 | 1.2:-47117375 | MS.gene041346:CDS |
GAATACCTTGATGTCAGGAG+TGG | 0.645242 | 1.2:+47117618 | None:intergenic |
AAGAAGCGTGCTATAGAGGA+CGG | 0.645449 | 1.2:-47117300 | MS.gene041346:CDS |
TGGTTACGGAGGAGGAGATG+AGG | 0.648876 | 1.2:+47118792 | None:intergenic |
GCGGTTCCTGACAGGACACG+TGG | 0.649476 | 1.2:-47118579 | MS.gene041346:CDS |
GCTGTTAACTGTCATGCCGG+AGG | 0.655840 | 1.2:-47115567 | MS.gene041346:CDS |
ACAGGTGAAGATAATTGGGG+TGG | 0.664304 | 1.2:-47117002 | MS.gene041346:intron |
TAGTGTGGTGCATTCTGTGA+CGG | 0.664443 | 1.2:+47118769 | None:intergenic |
TGCAGTGGAAATCTGTGGAG+AGG | 0.669367 | 1.2:-47117380 | MS.gene041346:intron |
ACATCGGGATGATCAAAAGG+AGG | 0.679406 | 1.2:+47117264 | None:intergenic |
GGCGAAACCTTCAACCTCGG+AGG | 0.692911 | 1.2:+47118636 | None:intergenic |
ACCGCTCCAACGTAACCAGG+TGG | 0.696827 | 1.2:+47118597 | None:intergenic |
TTCACAGGTGAAGATAATTG+GGG | 0.702347 | 1.2:-47117005 | MS.gene041346:intron |
ATAGTCATACCCAAGTCCGG+TGG | 0.715971 | 1.2:+47114415 | None:intergenic |
GGTTAGGGTGAAGAGTAGTG+TGG | 0.726653 | 1.2:+47118754 | None:intergenic |
GTTCCTGACAGGACACGTGG+TGG | 0.729331 | 1.2:-47118576 | MS.gene041346:CDS |
AATAAAGAGATATTCCATCG+TGG | 0.751711 | 1.2:+47114642 | None:intergenic |
CAAGTATTATGGGCTCAAGG+GGG | 0.760406 | 1.2:-47115687 | MS.gene041346:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTATAAAAATTCAAAATGAA+GGG | + | chr1.2:47118202-47118221 | None:intergenic | 10.0% |
!! | TTTATAAAAATTCAAAATGA+AGG | + | chr1.2:47118203-47118222 | None:intergenic | 10.0% |
!!! | ATCAAAAATTGATAATAAAC+AGG | + | chr1.2:47117887-47117906 | None:intergenic | 15.0% |
!!! | GTTAATTTTTTGTTTTGTTT+TGG | - | chr1.2:47114899-47114918 | MS.gene041346:intron | 15.0% |
!!! | TATTTTATTATTCATTGTGT+TGG | - | chr1.2:47118031-47118050 | MS.gene041346:intron | 15.0% |
!!! | TGAGTTTTCAAAAAAAAAAA+AGG | - | chr1.2:47117158-47117177 | MS.gene041346:CDS | 15.0% |
!! | AATTCATAAGTTCTTACTAA+AGG | - | chr1.2:47115051-47115070 | MS.gene041346:CDS | 20.0% |
!! | AGAATTATTTAATGCTTCAT+TGG | - | chr1.2:47116823-47116842 | MS.gene041346:CDS | 20.0% |
!! | ATTTAGTACTTAACTTTGTT+TGG | + | chr1.2:47118255-47118274 | None:intergenic | 20.0% |
!! | CCAGATAAAAAAAAAAAATC+TGG | + | chr1.2:47116979-47116998 | None:intergenic | 20.0% |
!! | TATTATTCATAAACTTGTCA+AGG | + | chr1.2:47115113-47115132 | None:intergenic | 20.0% |
!! | TGGTACAATTATATGAATTT+GGG | - | chr1.2:47117188-47117207 | MS.gene041346:CDS | 20.0% |
!! | TTACACAACAAAAAAAAGTT+CGG | + | chr1.2:47116799-47116818 | None:intergenic | 20.0% |
!! | TTTCAAAACAAAGTTAAACT+TGG | + | chr1.2:47118438-47118457 | None:intergenic | 20.0% |
!! | TTTGTACATTAAATGGAAAT+TGG | - | chr1.2:47117374-47117393 | MS.gene041346:CDS | 20.0% |
!!! | AAAAAAAAATCTGGAGTTAA+CGG | + | chr1.2:47116970-47116989 | None:intergenic | 20.0% |
!!! | ATACTGCATGTTTTTTTTTT+TGG | - | chr1.2:47118641-47118660 | MS.gene041346:CDS | 20.0% |
!!! | ATATGTTGTTTATGAAATTG+TGG | - | chr1.2:47115359-47115378 | MS.gene041346:intron | 20.0% |
!!! | ATTTTACTCTGTACTTTTAA+AGG | - | chr1.2:47117216-47117235 | MS.gene041346:CDS | 20.0% |
!!! | CCAGATTTTTTTTTTTTATC+TGG | - | chr1.2:47116976-47116995 | MS.gene041346:CDS | 20.0% |
!!! | TAATAAAATATTATTGGCCT+TGG | + | chr1.2:47118021-47118040 | None:intergenic | 20.0% |
!!! | TTCATTGGTTTATATATACT+TGG | - | chr1.2:47116838-47116857 | MS.gene041346:CDS | 20.0% |
!!! | TTTGAAAACATTTTTCAGAT+GGG | - | chr1.2:47118451-47118470 | MS.gene041346:CDS | 20.0% |
!!! | TTTTGAAAACATTTTTCAGA+TGG | - | chr1.2:47118450-47118469 | MS.gene041346:CDS | 20.0% |
! | AAAAAAAAAAAGGATGCATG+TGG | - | chr1.2:47117168-47117187 | MS.gene041346:CDS | 25.0% |
! | AAAATAATTCCCAATTCTCA+CGG | + | chr1.2:47117334-47117353 | None:intergenic | 25.0% |
! | AAATGTATTAGTTGGAATTC+AGG | - | chr1.2:47118733-47118752 | MS.gene041346:CDS | 25.0% |
! | AACAAAAAAAAGTTCGGATT+TGG | + | chr1.2:47116793-47116812 | None:intergenic | 25.0% |
! | AATTCAAAAGTTGTGTGTAT+TGG | + | chr1.2:47115188-47115207 | None:intergenic | 25.0% |
! | ACATGAATTTCGATAAACTT+AGG | - | chr1.2:47117573-47117592 | MS.gene041346:intron | 25.0% |
! | ACGTGTTTAGTAAACATTAT+CGG | + | chr1.2:47118385-47118404 | None:intergenic | 25.0% |
! | CAAAAATAAGTCAATCCAAA+CGG | + | chr1.2:47114987-47115006 | None:intergenic | 25.0% |
! | GTGGTACAATTATATGAATT+TGG | - | chr1.2:47117187-47117206 | MS.gene041346:CDS | 25.0% |
! | TCTGCAAACAATAACAAATT+TGG | - | chr1.2:47116715-47116734 | MS.gene041346:intron | 25.0% |
! | TTAATGTACAAAACATTCGA+AGG | + | chr1.2:47117366-47117385 | None:intergenic | 25.0% |
!! | AAAAAAAATCTGGAGTTAAC+GGG | + | chr1.2:47116969-47116988 | None:intergenic | 25.0% |
!! | ACAAATTTGGAATTGATTGA+TGG | - | chr1.2:47116728-47116747 | MS.gene041346:intron | 25.0% |
!! | CGAATGTTTTGTACATTAAA+TGG | - | chr1.2:47117367-47117386 | MS.gene041346:CDS | 25.0% |
!! | GAAATTGTGAATTTTGTGAT+AGG | - | chr1.2:47115404-47115423 | MS.gene041346:CDS | 25.0% |
!! | TTGACATTTTTAATGTTCAC+AGG | - | chr1.2:47116187-47116206 | MS.gene041346:intron | 25.0% |
!!! | ACTGTTATTTTTTCCAAAAC+AGG | - | chr1.2:47117715-47117734 | MS.gene041346:CDS | 25.0% |
!!! | CTGTTATTTTTTCCAAAACA+GGG | - | chr1.2:47117716-47117735 | MS.gene041346:CDS | 25.0% |
!!! | TGCATTTCTTTTAGTTCTAA+GGG | + | chr1.2:47118080-47118099 | None:intergenic | 25.0% |
!!! | TTTCAAACAGTTTTGTGAAT+TGG | - | chr1.2:47117673-47117692 | MS.gene041346:CDS | 25.0% |
!!! | TTTTTTACCTCTCTGTATTA+TGG | - | chr1.2:47116873-47116892 | MS.gene041346:CDS | 25.0% |
AAACTGTCAAGAAAGATAGA+TGG | + | chr1.2:47116622-47116641 | None:intergenic | 30.0% | |
AAGCATACTGCAAGTATTAT+GGG | - | chr1.2:47117510-47117529 | MS.gene041346:intron | 30.0% | |
AATAAAGAGATATTCCATCG+TGG | + | chr1.2:47118568-47118587 | None:intergenic | 30.0% | |
AATCACAACAGGATGATTAT+AGG | - | chr1.2:47117007-47117026 | MS.gene041346:intron | 30.0% | |
AATGTTATAGCAATAACCTC+CGG | - | chr1.2:47117545-47117564 | MS.gene041346:intron | 30.0% | |
ACTTGGTCAAATACAAAAAC+AGG | + | chr1.2:47118421-47118440 | None:intergenic | 30.0% | |
ATAAAGCCCATAATATGAGA+CGG | - | chr1.2:47118293-47118312 | MS.gene041346:intron | 30.0% | |
ATCATCCTGTTGTGATTTAA+TGG | + | chr1.2:47117004-47117023 | None:intergenic | 30.0% | |
ATTCAATATGTCTCTCATGT+CGG | - | chr1.2:47114930-47114949 | MS.gene041346:intron | 30.0% | |
ATTTATCATCTTCACGTAAG+CGG | + | chr1.2:47116076-47116095 | None:intergenic | 30.0% | |
CAAATACAGATATAGTTCCA+AGG | - | chr1.2:47117803-47117822 | MS.gene041346:intron | 30.0% | |
CAAGACCATTAAATCAAATG+GGG | + | chr1.2:47118350-47118369 | None:intergenic | 30.0% | |
CTAAATGCAAACTTTCACAA+GGG | + | chr1.2:47116433-47116452 | None:intergenic | 30.0% | |
CTTAGAACTAAAAGAAATGC+AGG | - | chr1.2:47118079-47118098 | MS.gene041346:intron | 30.0% | |
GACTAGTATACTTACTTCTA+AGG | - | chr1.2:47114693-47114712 | MS.gene041346:CDS | 30.0% | |
GATAATAAACAGGAAAGACA+CGG | + | chr1.2:47117877-47117896 | None:intergenic | 30.0% | |
GCATTAAAAGCTTGAAGAAA+AGG | + | chr1.2:47118835-47118854 | None:intergenic | 30.0% | |
GGGTTAAATAGCAATGTAAT+TGG | + | chr1.2:47116949-47116968 | None:intergenic | 30.0% | |
TAAATGAATACCTTGATGTC+AGG | + | chr1.2:47115597-47115616 | None:intergenic | 30.0% | |
TAACTAAAACTCATCAAACG+TGG | + | chr1.2:47115650-47115669 | None:intergenic | 30.0% | |
TAAGTGCAGAGTAATCAAAT+TGG | - | chr1.2:47116659-47116678 | MS.gene041346:intron | 30.0% | |
TCTAAATGCAAACTTTCACA+AGG | + | chr1.2:47116434-47116453 | None:intergenic | 30.0% | |
! | AAAAATTTCATCAAAGCACC+AGG | + | chr1.2:47118532-47118551 | None:intergenic | 30.0% |
! | AACTATGAAAAACCCTGTTT+TGG | + | chr1.2:47117731-47117750 | None:intergenic | 30.0% |
! | AAGTTTGCATTTAGAATCTC+TGG | - | chr1.2:47116439-47116458 | MS.gene041346:intron | 30.0% |
! | AATTTGGAATTGATTGATGG+AGG | - | chr1.2:47116731-47116750 | MS.gene041346:intron | 30.0% |
! | CACACAACTTTTGAATTTTC+TGG | - | chr1.2:47115191-47115210 | MS.gene041346:intron | 30.0% |
! | GAAGCAAACAAAGTATTATC+TGG | + | chr1.2:47115742-47115761 | None:intergenic | 30.0% |
! | TAAACTTCCAAAGGATGTTT+TGG | - | chr1.2:47115467-47115486 | MS.gene041346:intron | 30.0% |
! | TAGTACTTAACTTTGTTTGG+CGG | + | chr1.2:47118252-47118271 | None:intergenic | 30.0% |
! | TATGGGCTTTATAAATAGCA+TGG | + | chr1.2:47118285-47118304 | None:intergenic | 30.0% |
! | TATGTTCTTGTTCTTGTTGT+TGG | - | chr1.2:47114842-47114861 | MS.gene041346:intron | 30.0% |
! | TTATGAATGGTTTGAAACGA+GGG | + | chr1.2:47114477-47114496 | None:intergenic | 30.0% |
!!! | CTGCATTTCTTTTAGTTCTA+AGG | + | chr1.2:47118081-47118100 | None:intergenic | 30.0% |
!!! | GTTATTTTTTACCTTTGCAG+TGG | - | chr1.2:47115812-47115831 | MS.gene041346:intron | 30.0% |
!!! | TATACTCATTGTTTTGATGC+TGG | - | chr1.2:47116581-47116600 | MS.gene041346:intron | 30.0% |
AAAAGAAATGCAGGAGAGAA+TGG | - | chr1.2:47118088-47118107 | MS.gene041346:intron | 35.0% | |
AATCTAGCCATAATACAGAG+AGG | + | chr1.2:47116883-47116902 | None:intergenic | 35.0% | |
ACAAACAAAACAGCTCCATT+CGG | + | chr1.2:47117309-47117328 | None:intergenic | 35.0% | |
ACAAAGAATGCTGTAATTGC+AGG | - | chr1.2:47115250-47115269 | MS.gene041346:intron | 35.0% | |
AGAAACCATTTCAACAGGTT+TGG | + | chr1.2:47114521-47114540 | None:intergenic | 35.0% | |
AGAAAGCTGTTGTTCTTTAC+AGG | - | chr1.2:47117826-47117845 | MS.gene041346:intron | 35.0% | |
AGAACCTCATTCTGAATATC+AGG | + | chr1.2:47118484-47118503 | None:intergenic | 35.0% | |
AGGACATGTTTGAGGAAAAA+AGG | - | chr1.2:47117444-47117463 | MS.gene041346:intron | 35.0% | |
ATATGCTTGTGCTTCATCAT+AGG | + | chr1.2:47115884-47115903 | None:intergenic | 35.0% | |
ATCGAAATTCATGTTTGCTC+CGG | + | chr1.2:47117567-47117586 | None:intergenic | 35.0% | |
ATTATAGTCATACCCAAGTC+CGG | + | chr1.2:47118798-47118817 | None:intergenic | 35.0% | |
CAAAGAATGCTGTAATTGCA+GGG | - | chr1.2:47115251-47115270 | MS.gene041346:intron | 35.0% | |
CATCATAGGAATCTCCAATA+AGG | + | chr1.2:47115870-47115889 | None:intergenic | 35.0% | |
CCATCATATTATAAGCTCCA+CGG | + | chr1.2:47115446-47115465 | None:intergenic | 35.0% | |
CTCAAATAGAGCTTCTACAA+TGG | + | chr1.2:47117251-47117270 | None:intergenic | 35.0% | |
GAAGCATACTGCAAGTATTA+TGG | - | chr1.2:47117509-47117528 | MS.gene041346:intron | 35.0% | |
GAAGTAGTTGCCATAGATAA+TGG | + | chr1.2:47116498-47116517 | None:intergenic | 35.0% | |
GTTCACAGGTGAAGATAATT+GGG | - | chr1.2:47116201-47116220 | MS.gene041346:intron | 35.0% | |
TACAAGCCATTAGATTGCAT+TGG | + | chr1.2:47118682-47118701 | None:intergenic | 35.0% | |
TACTCTCCGTCTCATATTAT+GGG | + | chr1.2:47118302-47118321 | None:intergenic | 35.0% | |
TATGATGGCTAAACTTCCAA+AGG | - | chr1.2:47115458-47115477 | MS.gene041346:intron | 35.0% | |
TATGGCTAGATTTAGTGAAG+CGG | - | chr1.2:47116891-47116910 | MS.gene041346:CDS | 35.0% | |
TGTTCACAGGTGAAGATAAT+TGG | - | chr1.2:47116200-47116219 | MS.gene041346:intron | 35.0% | |
TGTTGAATCACCTCTTGAAT+TGG | - | chr1.2:47114729-47114748 | MS.gene041346:CDS | 35.0% | |
TGTTTGTATCCGTGAGAATT+GGG | - | chr1.2:47117322-47117341 | MS.gene041346:CDS | 35.0% | |
TTACTCTCCGTCTCATATTA+TGG | + | chr1.2:47118303-47118322 | None:intergenic | 35.0% | |
TTCACAGGTGAAGATAATTG+GGG | - | chr1.2:47116202-47116221 | MS.gene041346:intron | 35.0% | |
TTGTTTGTATCCGTGAGAAT+TGG | - | chr1.2:47117321-47117340 | MS.gene041346:CDS | 35.0% | |
! | GATTATCTAGGACTTGACAT+TGG | - | chr1.2:47117408-47117427 | MS.gene041346:intron | 35.0% |
! | GTATTCTCATTTAAGATCCG+TGG | - | chr1.2:47115426-47115445 | MS.gene041346:CDS | 35.0% |
! | GTTATGAATGGTTTGAAACG+AGG | + | chr1.2:47114478-47114497 | None:intergenic | 35.0% |
! | TGAGGAAAAAAGGAGCATAT+TGG | - | chr1.2:47117454-47117473 | MS.gene041346:intron | 35.0% |
! | TGCAATTTGTGCATCGATAA+AGG | - | chr1.2:47116394-47116413 | MS.gene041346:intron | 35.0% |
!! | AACATGCAGTATTTGACTTG+AGG | + | chr1.2:47118633-47118652 | None:intergenic | 35.0% |
!! | ACAGACTTGGTGTTAATGTT+TGG | - | chr1.2:47114767-47114786 | MS.gene041346:intron | 35.0% |
!! | ACTTTTGAATTTTCTGGCAC+TGG | - | chr1.2:47115197-47115216 | MS.gene041346:intron | 35.0% |
!! | GAGTTGATGATAGTACTTAC+AGG | + | chr1.2:47114814-47114833 | None:intergenic | 35.0% |
!! | GTAACTGAACTTGCTAATGT+CGG | - | chr1.2:47117599-47117618 | MS.gene041346:intron | 35.0% |
!! | TGTGTTGATCATTTTGCTTG+AGG | - | chr1.2:47115336-47115355 | MS.gene041346:intron | 35.0% |
!!! | AAAGGATGTTTTGGAGAAAG+GGG | - | chr1.2:47115476-47115495 | MS.gene041346:intron | 35.0% |
!!! | CAAAGGATGTTTTGGAGAAA+GGG | - | chr1.2:47115475-47115494 | MS.gene041346:intron | 35.0% |
AAGAACAACAGCTTTCTCCT+TGG | + | chr1.2:47117823-47117842 | None:intergenic | 40.0% | |
AATCACTCAAGTTTGAACCC+CGG | - | chr1.2:47115686-47115705 | MS.gene041346:CDS | 40.0% | |
ACACACACCACCATTATCTA+TGG | - | chr1.2:47116485-47116504 | MS.gene041346:intron | 40.0% | |
ACATTGGTAAACCTTGTTGC+AGG | - | chr1.2:47117424-47117443 | MS.gene041346:intron | 40.0% | |
AGTCCATACAGAGAAAACTC+TGG | - | chr1.2:47117063-47117082 | MS.gene041346:intron | 40.0% | |
AGTCTCCAAACCTGTTGAAA+TGG | - | chr1.2:47114513-47114532 | MS.gene041346:intron | 40.0% | |
ATGACATCGGGATGATCAAA+AGG | + | chr1.2:47115949-47115968 | None:intergenic | 40.0% | |
ATGGCTAGATTTAGTGAAGC+GGG | - | chr1.2:47116892-47116911 | MS.gene041346:CDS | 40.0% | |
ATTATAGGTTCGATTCCCCA+CGG | - | chr1.2:47117022-47117041 | MS.gene041346:intron | 40.0% | |
ATTCAATCTCTTGGCAGACA+TGG | + | chr1.2:47115541-47115560 | None:intergenic | 40.0% | |
CAACTCTTCCAAGTGAACAA+AGG | + | chr1.2:47116151-47116170 | None:intergenic | 40.0% | |
CCGTGGAGCTTATAATATGA+TGG | - | chr1.2:47115443-47115462 | MS.gene041346:intron | 40.0% | |
CCTCATTCTGAATATCAGGT+CGG | + | chr1.2:47118480-47118499 | None:intergenic | 40.0% | |
CCTTTCTCCAAAACATCCTT+TGG | + | chr1.2:47115477-47115496 | None:intergenic | 40.0% | |
CGTGAAGATGATAAATCCAG+AGG | - | chr1.2:47116080-47116099 | MS.gene041346:intron | 40.0% | |
CGTTGACCAATGCAATCTAA+TGG | - | chr1.2:47118673-47118692 | MS.gene041346:CDS | 40.0% | |
CTCATTCTGAATATCAGGTC+GGG | + | chr1.2:47118479-47118498 | None:intergenic | 40.0% | |
GAAAGATCATTTGCGTCACA+TGG | - | chr1.2:47118157-47118176 | MS.gene041346:intron | 40.0% | |
GAACTGAATTTCTTCTGACC+TGG | - | chr1.2:47117751-47117770 | MS.gene041346:CDS | 40.0% | |
GACAACTAAGTGTTATGCCA+AGG | - | chr1.2:47118001-47118020 | MS.gene041346:intron | 40.0% | |
GATCATCCCGATGTCATTAT+GGG | - | chr1.2:47115952-47115971 | MS.gene041346:intron | 40.0% | |
GATGTCAATATTCTGAGCAG+TGG | + | chr1.2:47117923-47117942 | None:intergenic | 40.0% | |
GATTGTGGAGTAAGTGCTAT+GGG | - | chr1.2:47114664-47114683 | MS.gene041346:CDS | 40.0% | |
GCAAACTTTCACAAGGGAAA+GGG | + | chr1.2:47116427-47116446 | None:intergenic | 40.0% | |
GCTGGAGCAAATGTATTAGT+TGG | - | chr1.2:47118725-47118744 | MS.gene041346:CDS | 40.0% | |
GGTAACTGGCATTGCAATAA+CGG | + | chr1.2:47115571-47115590 | None:intergenic | 40.0% | |
GTGCAATGGAAAAACCTATC+AGG | + | chr1.2:47116125-47116144 | None:intergenic | 40.0% | |
TAGCTAATGTTTGTCTCAGC+CGG | + | chr1.2:47115708-47115727 | None:intergenic | 40.0% | |
TCGATGCACAAATTGCATCA+CGG | + | chr1.2:47116391-47116410 | None:intergenic | 40.0% | |
TGATCATCCCGATGTCATTA+TGG | - | chr1.2:47115951-47115970 | MS.gene041346:intron | 40.0% | |
TGATTGTGGAGTAAGTGCTA+TGG | - | chr1.2:47114663-47114682 | MS.gene041346:CDS | 40.0% | |
TGCAAACTTTCACAAGGGAA+AGG | + | chr1.2:47116428-47116447 | None:intergenic | 40.0% | |
TGCAAATTCTAACCTGTGCA+CGG | + | chr1.2:47118597-47118616 | None:intergenic | 40.0% | |
TGCAAGTATTATGGGCTCAA+GGG | - | chr1.2:47117518-47117537 | MS.gene041346:intron | 40.0% | |
TTTACCTTTCCAGAAAGACC+TGG | - | chr1.2:47118511-47118530 | MS.gene041346:CDS | 40.0% | |
TTTATTCCATTACCGTGCAC+AGG | - | chr1.2:47118582-47118601 | MS.gene041346:CDS | 40.0% | |
! | AAGCCAGAGTTTTCTCTGTA+TGG | + | chr1.2:47117069-47117088 | None:intergenic | 40.0% |
! | AATCCAGAGGTTTGTTTGCA+TGG | - | chr1.2:47116093-47116112 | MS.gene041346:intron | 40.0% |
! | AATGGTTTGAAACGAGGGTT+AGG | + | chr1.2:47114472-47114491 | None:intergenic | 40.0% |
! | ACTTAACTTTGTTTGGCGGT+TGG | + | chr1.2:47118248-47118267 | None:intergenic | 40.0% |
! | AGCTGCCCCATTTGATTTAA+TGG | - | chr1.2:47118342-47118361 | MS.gene041346:intron | 40.0% |
! | ATGGTTTGAAACGAGGGTTA+GGG | + | chr1.2:47114471-47114490 | None:intergenic | 40.0% |
! | CAAAACTGTTTGAAACTGCC+AGG | + | chr1.2:47117668-47117687 | None:intergenic | 40.0% |
! | CTTAACTTTGTTTGGCGGTT+GGG | + | chr1.2:47118247-47118266 | None:intergenic | 40.0% |
! | GATATTCCATCGTGGACTAA+AGG | + | chr1.2:47118560-47118579 | None:intergenic | 40.0% |
! | GTAGTTGCCATAGATAATGG+TGG | + | chr1.2:47116495-47116514 | None:intergenic | 40.0% |
!! | GAAAGCACTGCAGATTATCT+AGG | - | chr1.2:47117396-47117415 | MS.gene041346:intron | 40.0% |
!! | TGGTGCCATTAAATCACAAC+AGG | - | chr1.2:47116996-47117015 | MS.gene041346:CDS | 40.0% |
!! | TTGGCTTTGTCACTTCATCA+TGG | - | chr1.2:47116248-47116267 | MS.gene041346:intron | 40.0% |
!!! | CCAAAGGATGTTTTGGAGAA+AGG | - | chr1.2:47115474-47115493 | MS.gene041346:intron | 40.0% |
AAGCTGACGTCAGAGACTAA+GGG | - | chr1.2:47114954-47114973 | MS.gene041346:intron | 45.0% | |
ACACCATGCAAACAAACCTC+TGG | + | chr1.2:47116099-47116118 | None:intergenic | 45.0% | |
ACAGGTGAAGATAATTGGGG+TGG | - | chr1.2:47116205-47116224 | MS.gene041346:intron | 45.0% | |
ACATCGGGATGATCAAAAGG+AGG | + | chr1.2:47115946-47115965 | None:intergenic | 45.0% | |
ACCCACTGATGCAAATGCAT+TGG | - | chr1.2:47116229-47116248 | MS.gene041346:intron | 45.0% | |
ACCTTTGCAGTGGAAATCTG+TGG | - | chr1.2:47115822-47115841 | MS.gene041346:intron | 45.0% | |
ACGTCAGAGACTAAGGGTAA+GGG | - | chr1.2:47114960-47114979 | MS.gene041346:intron | 45.0% | |
ACTTCATCATGGCCAAAGAG+TGG | - | chr1.2:47116259-47116278 | MS.gene041346:intron | 45.0% | |
AGATGGTGTGGCTGTAAAAG+AGG | - | chr1.2:47116307-47116326 | MS.gene041346:intron | 45.0% | |
AGCCAATGCATTTGCATCAG+TGG | + | chr1.2:47116234-47116253 | None:intergenic | 45.0% | |
AGCTAATGTTTGTCTCAGCC+GGG | + | chr1.2:47115707-47115726 | None:intergenic | 45.0% | |
AGTTACCACTCCTGACATCA+AGG | - | chr1.2:47115584-47115603 | MS.gene041346:CDS | 45.0% | |
ATTATGGGTCAGGGAACTGT+CGG | - | chr1.2:47115967-47115986 | MS.gene041346:intron | 45.0% | |
CAAGTATTATGGGCTCAAGG+GGG | - | chr1.2:47117520-47117539 | MS.gene041346:intron | 45.0% | |
CATGCAATCTTTGTGCCTGT+GGG | - | chr1.2:47116024-47116043 | MS.gene041346:intron | 45.0% | |
CCAAAGCTTTCTGACAGACT+TGG | - | chr1.2:47114754-47114773 | MS.gene041346:intron | 45.0% | |
CCAAGTCTGTCAGAAAGCTT+TGG | + | chr1.2:47114757-47114776 | None:intergenic | 45.0% | |
CCGACCTGATATTCAGAATG+AGG | - | chr1.2:47118477-47118496 | MS.gene041346:CDS | 45.0% | |
CTAGATTTAGTGAAGCGGGT+TGG | - | chr1.2:47116896-47116915 | MS.gene041346:CDS | 45.0% | |
CTCAAACATGTCCTGCAACA+AGG | + | chr1.2:47117438-47117457 | None:intergenic | 45.0% | |
CTGCAAGTATTATGGGCTCA+AGG | - | chr1.2:47117517-47117536 | MS.gene041346:intron | 45.0% | |
CTTGTTGCAGGACATGTTTG+AGG | - | chr1.2:47117436-47117455 | MS.gene041346:intron | 45.0% | |
GAAATTCATGTTTGCTCCGG+AGG | + | chr1.2:47117564-47117583 | None:intergenic | 45.0% | |
GAATACCTTGATGTCAGGAG+TGG | + | chr1.2:47115592-47115611 | None:intergenic | 45.0% | |
GATTCACTTCAGTATCCACC+TGG | - | chr1.2:47114595-47114614 | MS.gene041346:intron | 45.0% | |
GCAAGTATTATGGGCTCAAG+GGG | - | chr1.2:47117519-47117538 | MS.gene041346:intron | 45.0% | |
GCCAATGCATTTGCATCAGT+GGG | + | chr1.2:47116233-47116252 | None:intergenic | 45.0% | |
GGAGCAGAAACCATTTCAAC+AGG | + | chr1.2:47114526-47114545 | None:intergenic | 45.0% | |
GGCACAAAGATTGCATGAAC+CGG | + | chr1.2:47116021-47116040 | None:intergenic | 45.0% | |
GGCGTTGCAATTCAATCTCT+TGG | + | chr1.2:47115550-47115569 | None:intergenic | 45.0% | |
GGTGGATACTGAAGTGAATC+CGG | + | chr1.2:47114595-47114614 | None:intergenic | 45.0% | |
TAAGCTGACGTCAGAGACTA+AGG | - | chr1.2:47114953-47114972 | MS.gene041346:intron | 45.0% | |
TAAGCTGTCATTCGTCCGAA+TGG | - | chr1.2:47117291-47117310 | MS.gene041346:CDS | 45.0% | |
TAGACTCCTTTAGTCCACGA+TGG | - | chr1.2:47118551-47118570 | MS.gene041346:CDS | 45.0% | |
TAGTGTGGTGCATTCTGTGA+CGG | + | chr1.2:47114441-47114460 | None:intergenic | 45.0% | |
TCAGCTGGAAATCATGCTCA+AGG | - | chr1.2:47115510-47115529 | MS.gene041346:intron | 45.0% | |
TCATGCAATCTTTGTGCCTG+TGG | - | chr1.2:47116023-47116042 | MS.gene041346:intron | 45.0% | |
TCCACAGATTTCCACTGCAA+AGG | + | chr1.2:47115826-47115845 | None:intergenic | 45.0% | |
TCCCTGACCCATAATGACAT+CGG | + | chr1.2:47115962-47115981 | None:intergenic | 45.0% | |
TCTGCTGTTAACTGTCATGC+CGG | - | chr1.2:47117637-47117656 | MS.gene041346:CDS | 45.0% | |
TGAATTTCTTCTGACCTGGC+AGG | - | chr1.2:47117755-47117774 | MS.gene041346:CDS | 45.0% | |
TTCAACAGGTTTGGAGACTG+CGG | + | chr1.2:47114512-47114531 | None:intergenic | 45.0% | |
TTCTAACCTGTGCACGGTAA+TGG | + | chr1.2:47118591-47118610 | None:intergenic | 45.0% | |
TTGATGTCAGGAGTGGTAAC+TGG | + | chr1.2:47115585-47115604 | None:intergenic | 45.0% | |
! | AAGAAGCGTGCTATAGAGGA+CGG | - | chr1.2:47115907-47115926 | MS.gene041346:intron | 45.0% |
! | ATCAAAGCACCAGGTCTTTC+TGG | + | chr1.2:47118523-47118542 | None:intergenic | 45.0% |
! | ATGGCTTGTACTTGCTGCTT+CGG | - | chr1.2:47118692-47118711 | MS.gene041346:CDS | 45.0% |
! | ATTGTGTTGGTGTGCAGTGT+TGG | - | chr1.2:47118044-47118063 | MS.gene041346:intron | 45.0% |
! | CAATCTCTCAGACGTTGACT+TGG | - | chr1.2:47118133-47118152 | MS.gene041346:intron | 45.0% |
! | TCATGGCCAAAGAGTGGTTT+TGG | - | chr1.2:47116265-47116284 | MS.gene041346:intron | 45.0% |
! | TGCTAAGAAGCGTGCTATAG+AGG | - | chr1.2:47115903-47115922 | MS.gene041346:intron | 45.0% |
! | TGCTCCTTTTGTTGAGTCAC+CGG | - | chr1.2:47114540-47114559 | MS.gene041346:intron | 45.0% |
!! | TTGCATGGTGTTGTCCTGAT+AGG | - | chr1.2:47116108-47116127 | MS.gene041346:intron | 45.0% |
!! | TTGTGCAAGGAGTTGGTAGA+TGG | - | chr1.2:47116350-47116369 | MS.gene041346:intron | 45.0% |
!! | AATGAATAATAAAATATTAT+TGG | + | chr1.2:47118027-47118046 | None:intergenic | 5.0% |
!!! | ATTAATTGATTTTTTTTTTT+GGG | - | chr1.2:47115304-47115323 | MS.gene041346:intron | 5.0% |
!!! | TATTAATTGATTTTTTTTTT+TGG | - | chr1.2:47115303-47115322 | MS.gene041346:intron | 5.0% |
AATTCCTCCATCTCGCTGCT+TGG | + | chr1.2:47118761-47118780 | None:intergenic | 50.0% | |
ACTAAGGGTAAGGGTCCGTT+TGG | - | chr1.2:47114969-47114988 | MS.gene041346:intron | 50.0% | |
AGTGGAAATCTGTGGAGAGG+TGG | - | chr1.2:47115830-47115849 | MS.gene041346:intron | 50.0% | |
ATAGTCATACCCAAGTCCGG+TGG | + | chr1.2:47118795-47118814 | None:intergenic | 50.0% | |
ATTTCTTCTGACCTGGCAGG+TGG | - | chr1.2:47117758-47117777 | MS.gene041346:CDS | 50.0% | |
CAAGAACCGACTAATCCGAG+GGG | + | chr1.2:47117128-47117147 | None:intergenic | 50.0% | |
CAGTATCCACCTGGTTACGT+TGG | - | chr1.2:47114604-47114623 | MS.gene041346:intron | 50.0% | |
CATCTGCAAATCCTCCAACC+TGG | + | chr1.2:47116292-47116311 | None:intergenic | 50.0% | |
CCCGATGTCATTATGGGTCA+GGG | - | chr1.2:47115958-47115977 | MS.gene041346:intron | 50.0% | |
CCCTGACCCATAATGACATC+GGG | + | chr1.2:47115961-47115980 | None:intergenic | 50.0% | |
CCTGGTCCAAAACCACTCTT+TGG | + | chr1.2:47116274-47116293 | None:intergenic | 50.0% | |
CTACCAACTCCTTGCACAAG+CGG | + | chr1.2:47116349-47116368 | None:intergenic | 50.0% | |
GAATTCAACGATCGTGCCAC+CGG | - | chr1.2:47118776-47118795 | MS.gene041346:CDS | 50.0% | |
GACGTCAGAGACTAAGGGTA+AGG | - | chr1.2:47114959-47114978 | MS.gene041346:intron | 50.0% | |
GCAAGAACCGACTAATCCGA+GGG | + | chr1.2:47117129-47117148 | None:intergenic | 50.0% | |
GCATTCTGTGACGGTGGTTA+CGG | + | chr1.2:47114432-47114451 | None:intergenic | 50.0% | |
GCTAATGTTTGTCTCAGCCG+GGG | + | chr1.2:47115706-47115725 | None:intergenic | 50.0% | |
GGAAACTTTCCGCTTGTGCA+AGG | - | chr1.2:47116337-47116356 | MS.gene041346:intron | 50.0% | |
GGGGTTATATGCTCTTCAGC+TGG | - | chr1.2:47115495-47115514 | MS.gene041346:intron | 50.0% | |
GGTGTGGCTGTAAAAGAGGT+TGG | - | chr1.2:47116311-47116330 | MS.gene041346:intron | 50.0% | |
GGTTAGGGTGAAGAGTAGTG+TGG | + | chr1.2:47114456-47114475 | None:intergenic | 50.0% | |
GTGGAAATCTGTGGAGAGGT+GGG | - | chr1.2:47115831-47115850 | MS.gene041346:intron | 50.0% | |
TCCCGATGTCATTATGGGTC+AGG | - | chr1.2:47115957-47115976 | MS.gene041346:intron | 50.0% | |
TGCACGTGCCTTTGTTCACT+TGG | - | chr1.2:47116140-47116159 | MS.gene041346:intron | 50.0% | |
TGCAGTGGAAATCTGTGGAG+AGG | - | chr1.2:47115827-47115846 | MS.gene041346:intron | 50.0% | |
TGGAAATCTGTGGAGAGGTG+GGG | - | chr1.2:47115832-47115851 | MS.gene041346:intron | 50.0% | |
TGGAGGATTTGCAGATGGTG+TGG | - | chr1.2:47116295-47116314 | MS.gene041346:intron | 50.0% | |
TGGCGGTTGGGAATAGTGAA+GGG | + | chr1.2:47118235-47118254 | None:intergenic | 50.0% | |
TTATGGGTCAGGGAACTGTC+GGG | - | chr1.2:47115968-47115987 | MS.gene041346:intron | 50.0% | |
TTGGCGGTTGGGAATAGTGA+AGG | + | chr1.2:47118236-47118255 | None:intergenic | 50.0% | |
TTTAACCAACCCTCGCAAGG+TGG | - | chr1.2:47117088-47117107 | MS.gene041346:intron | 50.0% | |
TTTCCGCTTGTGCAAGGAGT+TGG | - | chr1.2:47116343-47116362 | MS.gene041346:intron | 50.0% | |
TTTCTTCTGACCTGGCAGGT+GGG | - | chr1.2:47117759-47117778 | MS.gene041346:CDS | 50.0% | |
! | AGCACCAGGTCTTTCTGGAA+AGG | + | chr1.2:47118518-47118537 | None:intergenic | 50.0% |
! | AGCTTTGGCGCCAATTCAAG+AGG | + | chr1.2:47114742-47114761 | None:intergenic | 50.0% |
! | AGGAGCATATTGGAACCAGC+AGG | - | chr1.2:47117464-47117483 | MS.gene041346:intron | 50.0% |
! | CAGGTTGGAGGATTTGCAGA+TGG | - | chr1.2:47116290-47116309 | MS.gene041346:intron | 50.0% |
! | GCTTTTAACCAACCCTCGCA+AGG | - | chr1.2:47117085-47117104 | MS.gene041346:intron | 50.0% |
! | GGTGGTGATGAAGGTGATTG+TGG | - | chr1.2:47114649-47114668 | MS.gene041346:CDS | 50.0% |
! | GTGAACAAAGGCACGTGCAA+TGG | + | chr1.2:47116139-47116158 | None:intergenic | 50.0% |
! | TCCTTTTGTTGAGTCACCGG+CGG | - | chr1.2:47114543-47114562 | MS.gene041346:intron | 50.0% |
! | TGTACTTGCTGCTTCGGACA+GGG | - | chr1.2:47118698-47118717 | MS.gene041346:CDS | 50.0% |
! | TTGTACTTGCTGCTTCGGAC+AGG | - | chr1.2:47118697-47118716 | MS.gene041346:CDS | 50.0% |
!! | ATTCCCCACGGTGCTGATTT+CGG | - | chr1.2:47117034-47117053 | MS.gene041346:intron | 50.0% |
!! | ATTGGACCCCTCGGATTAGT+CGG | - | chr1.2:47117119-47117138 | MS.gene041346:intron | 50.0% |
!! | GGTGCTACTGTGGTCCTTAT+TGG | - | chr1.2:47115853-47115872 | MS.gene041346:intron | 50.0% |
!!! | AGAGTGGTTTTGGACCAGGT+TGG | - | chr1.2:47116275-47116294 | MS.gene041346:intron | 50.0% |
!!! | CCAAAGAGTGGTTTTGGACC+AGG | - | chr1.2:47116271-47116290 | MS.gene041346:intron | 50.0% |
AACAGGTTTGGAGACTGCGG+CGG | + | chr1.2:47114509-47114528 | None:intergenic | 55.0% | |
ATCTTTGTGCCTGTGGGAGG+TGG | - | chr1.2:47116030-47116049 | MS.gene041346:intron | 55.0% | |
ATGAGGTTGTGGCTGTGAGG+TGG | + | chr1.2:47114401-47114420 | None:intergenic | 55.0% | |
CATGAACCGGACGCTTCATC+TGG | + | chr1.2:47116008-47116027 | None:intergenic | 55.0% | |
CGCAAGAACCGACTAATCCG+AGG | + | chr1.2:47117130-47117149 | None:intergenic | 55.0% | |
GAGATGAGGTTGTGGCTGTG+AGG | + | chr1.2:47114404-47114423 | None:intergenic | 55.0% | |
GCAATCTTTGTGCCTGTGGG+AGG | - | chr1.2:47116027-47116046 | MS.gene041346:intron | 55.0% | |
GCGGCGGTGGTTGTTATGAA+TGG | + | chr1.2:47114490-47114509 | None:intergenic | 55.0% | |
GCTGTTAACTGTCATGCCGG+AGG | - | chr1.2:47117640-47117659 | MS.gene041346:CDS | 55.0% | |
GGCTGTAAAAGAGGTTGGCG+AGG | - | chr1.2:47116316-47116335 | MS.gene041346:intron | 55.0% | |
TCAGGTTCCAAGCAGCGAGA+TGG | - | chr1.2:47118751-47118770 | MS.gene041346:CDS | 55.0% | |
TCCACCTGGTTACGTTGGAG+CGG | - | chr1.2:47114609-47114628 | MS.gene041346:intron | 55.0% | |
TCCGAGGTTGAAGGTTTCGC+CGG | - | chr1.2:47114573-47114592 | MS.gene041346:intron | 55.0% | |
TCCGGCGAAACCTTCAACCT+CGG | + | chr1.2:47114577-47114596 | None:intergenic | 55.0% | |
TGGTTACGGAGGAGGAGATG+AGG | + | chr1.2:47114418-47114437 | None:intergenic | 55.0% | |
TGTGGTGCATTCTGTGACGG+TGG | + | chr1.2:47114438-47114457 | None:intergenic | 55.0% | |
TTCTGTGACGGTGGTTACGG+AGG | + | chr1.2:47114429-47114448 | None:intergenic | 55.0% | |
TTCTTCTGACCTGGCAGGTG+GGG | - | chr1.2:47117760-47117779 | MS.gene041346:CDS | 55.0% | |
TTGAAACTGCCAGGCTCCTC+CGG | + | chr1.2:47117659-47117678 | None:intergenic | 55.0% | |
! | AATGGTGGTGTGTGTGCGTG+TGG | + | chr1.2:47116480-47116499 | None:intergenic | 55.0% |
! | AGGACACGTGGTGGTGATGA+AGG | - | chr1.2:47114640-47114659 | MS.gene041346:CDS | 55.0% |
! | TTTTGTTGAGTCACCGGCGG+CGG | - | chr1.2:47114546-47114565 | MS.gene041346:intron | 55.0% |
!!! | GTGGTTTTGGACCAGGTTGG+AGG | - | chr1.2:47116278-47116297 | MS.gene041346:intron | 55.0% |
AACGATCGTGCCACCGGACT+TGG | - | chr1.2:47118782-47118801 | MS.gene041346:CDS | 60.0% | |
ACCCACCGAAATCAGCACCG+TGG | + | chr1.2:47117042-47117061 | None:intergenic | 60.0% | |
ACCGCTCCAACGTAACCAGG+TGG | + | chr1.2:47114613-47114632 | None:intergenic | 60.0% | |
ACGATCGTGCCACCGGACTT+GGG | - | chr1.2:47118783-47118802 | MS.gene041346:CDS | 60.0% | |
ACGTTGGAGCGGTTCCTGAC+AGG | - | chr1.2:47114620-47114639 | MS.gene041346:intron | 60.0% | |
AGGTTGTGGCTGTGAGGTGG+TGG | + | chr1.2:47114398-47114417 | None:intergenic | 60.0% | |
ATGAGACCACCACCTCCCAC+AGG | + | chr1.2:47116042-47116061 | None:intergenic | 60.0% | |
ATTCATCTGCCCCACCTGCC+AGG | + | chr1.2:47117772-47117791 | None:intergenic | 60.0% | |
CCACCGAAATCAGCACCGTG+GGG | + | chr1.2:47117040-47117059 | None:intergenic | 60.0% | |
CCCACCGAAATCAGCACCGT+GGG | + | chr1.2:47117041-47117060 | None:intergenic | 60.0% | |
CGGAGGAGGAGATGAGGTTG+TGG | + | chr1.2:47114412-47114431 | None:intergenic | 60.0% | |
GAGAGAGAGCTGGGAGTGGT+AGG | - | chr1.2:47116918-47116937 | MS.gene041346:CDS | 60.0% | |
GCCGCCGGTGACTCAACAAA+AGG | + | chr1.2:47114547-47114566 | None:intergenic | 60.0% | |
GGAACCGCTCCAACGTAACC+AGG | + | chr1.2:47114616-47114635 | None:intergenic | 60.0% | |
GGCGAAACCTTCAACCTCGG+AGG | + | chr1.2:47114574-47114593 | None:intergenic | 60.0% | |
GGTTCCAAGCAGCGAGATGG+AGG | - | chr1.2:47118754-47118773 | MS.gene041346:CDS | 60.0% | |
GTTCCTGACAGGACACGTGG+TGG | - | chr1.2:47114631-47114650 | MS.gene041346:CDS | 60.0% | |
GTTGGAGAGAGAGCTGGGAG+TGG | - | chr1.2:47116914-47116933 | MS.gene041346:CDS | 60.0% | |
TCACCACCACGTGTCCTGTC+AGG | + | chr1.2:47114637-47114656 | None:intergenic | 60.0% | |
TGCTTCGGACAGGGTGAAGC+TGG | - | chr1.2:47118707-47118726 | MS.gene041346:CDS | 60.0% | |
TGTGACGGTGGTTACGGAGG+AGG | + | chr1.2:47114426-47114445 | None:intergenic | 60.0% | |
TTTGTGCCTGTGGGAGGTGG+TGG | - | chr1.2:47116033-47116052 | MS.gene041346:intron | 60.0% | |
! | GGAGGTGGTGGTCTCATTGC+TGG | - | chr1.2:47116045-47116064 | MS.gene041346:intron | 60.0% |
! | TGTGCGCCAGATGAAGCGTC+CGG | - | chr1.2:47115999-47116018 | MS.gene041346:intron | 60.0% |
! | TTGTGGCTGTGAGGTGGTGG+AGG | + | chr1.2:47114395-47114414 | None:intergenic | 60.0% |
!! | AAGCGGGTTGGAGAGAGAGC+TGG | - | chr1.2:47116908-47116927 | MS.gene041346:CDS | 60.0% |
!! | AGCGGGTTGGAGAGAGAGCT+GGG | - | chr1.2:47116909-47116928 | MS.gene041346:CDS | 60.0% |
!! | CCCACGGTGCTGATTTCGGT+GGG | - | chr1.2:47117038-47117057 | MS.gene041346:intron | 60.0% |
ACCAACCCTCGCAAGGTGGC+CGG | - | chr1.2:47117092-47117111 | MS.gene041346:intron | 65.0% | |
ACTGTCATGCCGGAGGAGCC+TGG | - | chr1.2:47117647-47117666 | MS.gene041346:CDS | 65.0% | |
AGGTTTGGAGACTGCGGCGG+CGG | + | chr1.2:47114506-47114525 | None:intergenic | 65.0% | |
GCAGGCGCTCTTGCTCTTGC+TGG | - | chr1.2:47117482-47117501 | MS.gene041346:intron | 65.0% | |
GCGGTTCCTGACAGGACACG+TGG | - | chr1.2:47114628-47114647 | MS.gene041346:CDS | 65.0% | |
GGGTCAGGGAACTGTCGGGA+TGG | - | chr1.2:47115972-47115991 | MS.gene041346:intron | 65.0% | |
TCCGAGGGGTCCAATCCCAC+CGG | + | chr1.2:47117114-47117133 | None:intergenic | 65.0% | |
!! | CCCCACGGTGCTGATTTCGG+TGG | - | chr1.2:47117037-47117056 | MS.gene041346:intron | 65.0% |
!! | GCAAGAGCAAGAGCGCCTGC+TGG | + | chr1.2:47117482-47117501 | None:intergenic | 65.0% |
!! | GGAGAGGTGGGGTGCTACTG+TGG | - | chr1.2:47115843-47115862 | MS.gene041346:intron | 65.0% |
!! | TGGCTGTGAGGTGGTGGAGG+AGG | + | chr1.2:47114392-47114411 | None:intergenic | 65.0% |
AACCCTCGCAAGGTGGCCGG+TGG | - | chr1.2:47117095-47117114 | MS.gene041346:intron | 70.0% | |
ACCCTCGCAAGGTGGCCGGT+GGG | - | chr1.2:47117096-47117115 | MS.gene041346:intron | 70.0% | |
ACCGGCCACCTTGCGAGGGT+TGG | + | chr1.2:47117096-47117115 | None:intergenic | 70.0% | |
ATCCCACCGGCCACCTTGCG+AGG | + | chr1.2:47117101-47117120 | None:intergenic | 70.0% | |
CGCAAGGTGGCCGGTGGGAT+TGG | - | chr1.2:47117101-47117120 | MS.gene041346:intron | 70.0% | |
GCCGGTGGGATTGGACCCCT+CGG | - | chr1.2:47117110-47117129 | MS.gene041346:intron | 70.0% | |
GGCGGCTCCTCCGAGGTTGA+AGG | - | chr1.2:47114564-47114583 | MS.gene041346:intron | 70.0% | |
TCCCACCGGCCACCTTGCGA+GGG | + | chr1.2:47117100-47117119 | None:intergenic | 70.0% | |
TTTGGAGACTGCGGCGGCGG+TGG | + | chr1.2:47114503-47114522 | None:intergenic | 70.0% | |
AACCTCGGAGGAGCCGCCGC+CGG | + | chr1.2:47114562-47114581 | None:intergenic | 75.0% | |
! | CACCGGCGGCGGCTCCTCCG+AGG | - | chr1.2:47114557-47114576 | MS.gene041346:intron | 85.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.2 | gene | 47114370 | 47118859 | 47114370 | ID=MS.gene041346 |
chr1.2 | mRNA | 47114370 | 47118859 | 47114370 | ID=MS.gene041346.t1;Parent=MS.gene041346 |
chr1.2 | exon | 47118416 | 47118859 | 47118416 | ID=MS.gene041346.t1.exon1;Parent=MS.gene041346.t1 |
chr1.2 | CDS | 47118416 | 47118859 | 47118416 | ID=cds.MS.gene041346.t1;Parent=MS.gene041346.t1 |
chr1.2 | exon | 47117624 | 47117803 | 47117624 | ID=MS.gene041346.t1.exon2;Parent=MS.gene041346.t1 |
chr1.2 | CDS | 47117624 | 47117803 | 47117624 | ID=cds.MS.gene041346.t1;Parent=MS.gene041346.t1 |
chr1.2 | exon | 47117128 | 47117397 | 47117128 | ID=MS.gene041346.t1.exon3;Parent=MS.gene041346.t1 |
chr1.2 | CDS | 47117128 | 47117397 | 47117128 | ID=cds.MS.gene041346.t1;Parent=MS.gene041346.t1 |
chr1.2 | exon | 47116814 | 47117020 | 47116814 | ID=MS.gene041346.t1.exon4;Parent=MS.gene041346.t1 |
chr1.2 | CDS | 47116814 | 47117020 | 47116814 | ID=cds.MS.gene041346.t1;Parent=MS.gene041346.t1 |
chr1.2 | exon | 47115535 | 47115783 | 47115535 | ID=MS.gene041346.t1.exon5;Parent=MS.gene041346.t1 |
chr1.2 | CDS | 47115535 | 47115783 | 47115535 | ID=cds.MS.gene041346.t1;Parent=MS.gene041346.t1 |
chr1.2 | exon | 47115382 | 47115452 | 47115382 | ID=MS.gene041346.t1.exon6;Parent=MS.gene041346.t1 |
chr1.2 | CDS | 47115382 | 47115452 | 47115382 | ID=cds.MS.gene041346.t1;Parent=MS.gene041346.t1 |
chr1.2 | exon | 47115051 | 47115168 | 47115051 | ID=MS.gene041346.t1.exon7;Parent=MS.gene041346.t1 |
chr1.2 | CDS | 47115051 | 47115168 | 47115051 | ID=cds.MS.gene041346.t1;Parent=MS.gene041346.t1 |
chr1.2 | exon | 47114626 | 47114760 | 47114626 | ID=MS.gene041346.t1.exon8;Parent=MS.gene041346.t1 |
chr1.2 | CDS | 47114626 | 47114760 | 47114626 | ID=cds.MS.gene041346.t1;Parent=MS.gene041346.t1 |
chr1.2 | exon | 47114370 | 47114510 | 47114370 | ID=MS.gene041346.t1.exon9;Parent=MS.gene041346.t1 |
chr1.2 | CDS | 47114370 | 47114510 | 47114370 | ID=cds.MS.gene041346.t1;Parent=MS.gene041346.t1 |
Gene Sequence |
Protein sequence |