Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene04136.t1 | XP_003600425.1 | 99.2 | 476 | 4 | 0 | 1 | 476 | 1 | 476 | 1.60E-273 | 951.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene04136.t1 | O65583 | 84.2 | 467 | 72 | 2 | 4 | 468 | 3 | 469 | 1.1e-230 | 800.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene04136.t1 | G7IY62 | 99.2 | 476 | 4 | 0 | 1 | 476 | 1 | 476 | 1.1e-273 | 951.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene04136 | MS.gene79193 | PPI |
| MS.gene040387 | MS.gene04136 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene04136.t1 | MTR_3g061030 | 99.160 | 476 | 4 | 0 | 1 | 476 | 1 | 476 | 0.0 | 970 |
| MS.gene04136.t1 | MTR_5g096660 | 85.381 | 472 | 66 | 2 | 3 | 471 | 2 | 473 | 0.0 | 840 |
| MS.gene04136.t1 | MTR_3g061030 | 99.512 | 410 | 2 | 0 | 67 | 476 | 1 | 410 | 0.0 | 835 |
| MS.gene04136.t1 | MTR_7g029450 | 74.895 | 474 | 112 | 3 | 1 | 467 | 1 | 474 | 0.0 | 731 |
| MS.gene04136.t1 | MTR_4g103620 | 73.742 | 457 | 105 | 3 | 13 | 467 | 10 | 453 | 0.0 | 692 |
| MS.gene04136.t1 | MTR_6g021580 | 41.622 | 185 | 99 | 4 | 32 | 215 | 21 | 197 | 3.72e-39 | 142 |
| MS.gene04136.t1 | MTR_8g069865 | 30.168 | 179 | 114 | 4 | 50 | 226 | 67 | 236 | 2.36e-16 | 82.4 |
| MS.gene04136.t1 | MTR_4g020090 | 26.733 | 202 | 144 | 4 | 268 | 465 | 80 | 281 | 7.53e-15 | 75.1 |
| MS.gene04136.t1 | MTR_4g073890 | 29.050 | 179 | 116 | 4 | 50 | 226 | 91 | 260 | 1.20e-14 | 77.0 |
| MS.gene04136.t1 | MTR_4g073890 | 29.050 | 179 | 116 | 4 | 50 | 226 | 91 | 260 | 1.42e-14 | 76.3 |
| MS.gene04136.t1 | MTR_4g112790 | 29.609 | 179 | 115 | 4 | 50 | 226 | 72 | 241 | 2.85e-14 | 75.9 |
| MS.gene04136.t1 | MTR_4g112790 | 29.609 | 179 | 115 | 4 | 50 | 226 | 72 | 241 | 4.02e-14 | 75.1 |
| MS.gene04136.t1 | MTR_5g027530 | 26.582 | 158 | 115 | 1 | 105 | 262 | 137 | 293 | 5.93e-12 | 67.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene04136.t1 | AT4G26510 | 84.154 | 467 | 72 | 2 | 4 | 468 | 3 | 469 | 0.0 | 814 |
| MS.gene04136.t1 | AT4G26510 | 84.154 | 467 | 72 | 2 | 4 | 468 | 3 | 469 | 0.0 | 814 |
| MS.gene04136.t1 | AT4G26510 | 84.154 | 467 | 72 | 2 | 4 | 468 | 3 | 469 | 0.0 | 814 |
| MS.gene04136.t1 | AT4G26510 | 84.154 | 467 | 72 | 2 | 4 | 468 | 3 | 469 | 0.0 | 814 |
| MS.gene04136.t1 | AT1G55810 | 81.876 | 469 | 78 | 3 | 3 | 468 | 2 | 466 | 0.0 | 795 |
| MS.gene04136.t1 | AT1G55810 | 81.876 | 469 | 78 | 3 | 3 | 468 | 2 | 466 | 0.0 | 795 |
| MS.gene04136.t1 | AT1G55810 | 81.876 | 469 | 78 | 3 | 3 | 468 | 2 | 466 | 0.0 | 795 |
| MS.gene04136.t1 | AT1G55810 | 78.208 | 491 | 78 | 4 | 3 | 468 | 2 | 488 | 0.0 | 782 |
| MS.gene04136.t1 | AT1G55810 | 78.208 | 491 | 78 | 4 | 3 | 468 | 2 | 488 | 0.0 | 782 |
| MS.gene04136.t1 | AT1G55810 | 80.810 | 469 | 78 | 4 | 3 | 468 | 2 | 461 | 0.0 | 778 |
| MS.gene04136.t1 | AT1G55810 | 81.659 | 458 | 72 | 4 | 14 | 468 | 3 | 451 | 0.0 | 769 |
| MS.gene04136.t1 | AT3G27190 | 74.120 | 483 | 109 | 4 | 1 | 467 | 1 | 483 | 0.0 | 729 |
| MS.gene04136.t1 | AT5G40870 | 73.045 | 486 | 115 | 3 | 1 | 470 | 1 | 486 | 0.0 | 724 |
| MS.gene04136.t1 | AT3G27440 | 74.246 | 431 | 110 | 1 | 38 | 467 | 19 | 449 | 0.0 | 678 |
| MS.gene04136.t1 | AT3G27440 | 74.876 | 402 | 100 | 1 | 67 | 467 | 1 | 402 | 0.0 | 641 |
| MS.gene04136.t1 | AT3G27440 | 74.611 | 386 | 97 | 1 | 38 | 422 | 19 | 404 | 0.0 | 602 |
| MS.gene04136.t1 | AT1G26190 | 30.168 | 179 | 114 | 4 | 50 | 226 | 67 | 236 | 9.80e-17 | 83.6 |
| MS.gene04136.t1 | AT1G26190 | 30.726 | 179 | 113 | 4 | 50 | 226 | 67 | 236 | 1.01e-16 | 82.8 |
| MS.gene04136.t1 | AT1G26190 | 30.168 | 179 | 114 | 4 | 50 | 226 | 67 | 236 | 1.14e-16 | 83.2 |
| MS.gene04136.t1 | AT1G26190 | 30.168 | 179 | 114 | 4 | 50 | 226 | 67 | 236 | 1.28e-16 | 82.8 |
| MS.gene04136.t1 | AT1G26190 | 30.168 | 179 | 114 | 4 | 50 | 226 | 67 | 236 | 1.57e-16 | 82.4 |
| MS.gene04136.t1 | AT1G73980 | 31.844 | 179 | 111 | 5 | 50 | 226 | 67 | 236 | 7.09e-15 | 77.8 |
| MS.gene04136.t1 | AT1G73980 | 31.844 | 179 | 111 | 5 | 50 | 226 | 67 | 236 | 7.09e-15 | 77.8 |
| MS.gene04136.t1 | AT1G73980 | 31.844 | 179 | 111 | 5 | 50 | 226 | 67 | 236 | 7.09e-15 | 77.8 |
| MS.gene04136.t1 | AT3G53900 | 26.108 | 203 | 146 | 4 | 268 | 466 | 24 | 226 | 9.11e-14 | 71.2 |
| MS.gene04136.t1 | AT1G26190 | 32.836 | 134 | 87 | 2 | 95 | 226 | 8 | 140 | 1.37e-13 | 73.6 |
| MS.gene04136.t1 | AT3G53900 | 26.108 | 203 | 146 | 4 | 268 | 466 | 89 | 291 | 3.30e-13 | 70.5 |
| MS.gene04136.t1 | AT1G32060 | 29.944 | 177 | 120 | 3 | 50 | 226 | 70 | 242 | 4.94e-13 | 71.2 |
Find 88 sgRNAs with CRISPR-Local
Find 276 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCTTCAGATGTTATAATTT+TGG | 0.148585 | 3.1:+45390709 | MS.gene04136:CDS |
| TAAGTCAGCTGTTGATTTAA+TGG | 0.276355 | 3.1:+45388461 | MS.gene04136:CDS |
| GAATGAATGACATATAAATT+TGG | 0.284658 | 3.1:-45391737 | None:intergenic |
| CATACCACATGTACACCTTT+AGG | 0.293979 | 3.1:-45393351 | None:intergenic |
| GCGAGTTGTGCTTGTTAATC+AGG | 0.300317 | 3.1:+45389620 | MS.gene04136:CDS |
| TGAGGAATTGCTTCGTGTTA+TGG | 0.306352 | 3.1:+45390407 | MS.gene04136:CDS |
| ACCTTTACAGCATGCTCTTA+AGG | 0.337060 | 3.1:-45392808 | None:intergenic |
| TAATTTCAGTGGGGAGAGTA+TGG | 0.342371 | 3.1:+45392779 | MS.gene04136:intron |
| GTTGCTGGTGGTGCAGCATC+TGG | 0.360439 | 3.1:+45389552 | MS.gene04136:CDS |
| AAGTCAGCTGTTGATTTAAT+GGG | 0.361494 | 3.1:+45388462 | MS.gene04136:CDS |
| TTTCCACGATCCTCGTGTTC+GGG | 0.372455 | 3.1:+45390745 | MS.gene04136:CDS |
| TGCTGTAAAGGTATTAAGAT+TGG | 0.386732 | 3.1:+45392819 | MS.gene04136:CDS |
| TGCCTTTCTGAGATATCGTT+TGG | 0.387639 | 3.1:-45392987 | None:intergenic |
| ATACCGGGCATGGGCGAATT+CGG | 0.393264 | 3.1:+45393444 | MS.gene04136:CDS |
| CAGGTTGTAGAACATGGTTT+GGG | 0.398829 | 3.1:+45392018 | MS.gene04136:intron |
| ATATCGGCATATTTCTTTGT+TGG | 0.406744 | 3.1:-45391617 | None:intergenic |
| ATATCAGTTGCTGATGTTGT+TGG | 0.410405 | 3.1:-45388558 | None:intergenic |
| GTGACATCTGAGATAGAGAT+TGG | 0.413275 | 3.1:+45393399 | MS.gene04136:CDS |
| TCAGGTTGTAGAACATGGTT+TGG | 0.415714 | 3.1:+45392017 | MS.gene04136:intron |
| TCCACGAGGTATGATGATAT+CGG | 0.428819 | 3.1:-45391633 | None:intergenic |
| TAACTCTTGAAGTCATACTT+TGG | 0.432602 | 3.1:-45390462 | None:intergenic |
| TTCTGATCGTTTGATTCGAT+TGG | 0.434269 | 3.1:+45391922 | MS.gene04136:CDS |
| TCCAAAATTATAACATCTGA+AGG | 0.442172 | 3.1:-45390710 | None:intergenic |
| TACAACCAACCTTTCGTCAT+AGG | 0.445494 | 3.1:+45388582 | MS.gene04136:CDS |
| GATTTCTTTACTTATACAAA+AGG | 0.447550 | 3.1:+45393146 | MS.gene04136:CDS |
| TTCGTTTGGCAAGAAGGATC+AGG | 0.449737 | 3.1:+45391180 | MS.gene04136:CDS |
| GCTGTAAAGGTATTAAGATT+GGG | 0.459445 | 3.1:+45392820 | MS.gene04136:CDS |
| AGAAGGTGACAATGGTCAAC+AGG | 0.460710 | 3.1:+45392860 | MS.gene04136:CDS |
| TGCAGATGCTGATGTTCGTT+TGG | 0.464075 | 3.1:+45391166 | MS.gene04136:intron |
| TTACTGTTGGACCCTATCCT+TGG | 0.467327 | 3.1:+45393014 | MS.gene04136:CDS |
| CACGAGGATCGTGGAAAACA+AGG | 0.475686 | 3.1:-45390739 | None:intergenic |
| ACAAAAGTGATGCGTTAAGA+AGG | 0.484391 | 3.1:+45390484 | MS.gene04136:CDS |
| TGAAGATTACCGTGTCATAC+CGG | 0.485581 | 3.1:+45393428 | MS.gene04136:CDS |
| CTGATGTTCGTTTGGCAAGA+AGG | 0.491742 | 3.1:+45391174 | MS.gene04136:CDS |
| CTTGATCAGGTTGTAGAACA+TGG | 0.496475 | 3.1:+45392012 | MS.gene04136:intron |
| CATGAACCTGTGCCAAGGAT+AGG | 0.496913 | 3.1:-45393026 | None:intergenic |
| GAATTCGGAGATCGGTACTT+TGG | 0.502037 | 3.1:+45393459 | MS.gene04136:CDS |
| AGCGAGAAGGATCGGGACAT+TGG | 0.503321 | 3.1:+45391212 | MS.gene04136:CDS |
| GCCTTAAGAGCATGCTGTAA+AGG | 0.510977 | 3.1:+45392807 | MS.gene04136:CDS |
| CAGCACATCCGCACAAAGCT+TGG | 0.511983 | 3.1:+45391689 | MS.gene04136:CDS |
| TCTCCGAATTCGCCCATGCC+CGG | 0.514493 | 3.1:-45393447 | None:intergenic |
| GATTACAACTTTGATCATCC+TGG | 0.515812 | 3.1:+45390003 | MS.gene04136:CDS |
| TGATACCAGCGAGAAGGATC+GGG | 0.516168 | 3.1:+45391205 | MS.gene04136:CDS |
| GAGATTAAGAAATATGATGT+TGG | 0.522890 | 3.1:-45393181 | None:intergenic |
| ATGAACCTGTGCCAAGGATA+GGG | 0.525822 | 3.1:-45393025 | None:intergenic |
| TTACCGTGTCATACCGGGCA+TGG | 0.525947 | 3.1:+45393434 | MS.gene04136:CDS |
| GTGATACCAGCGAGAAGGAT+CGG | 0.526363 | 3.1:+45391204 | MS.gene04136:CDS |
| GCATGGGCGAATTCGGAGAT+CGG | 0.534838 | 3.1:+45393451 | MS.gene04136:CDS |
| ATTTCTTTACTTATACAAAA+GGG | 0.541370 | 3.1:+45393147 | MS.gene04136:CDS |
| GTAGTGGTTGCTTCACAGTA+AGG | 0.547142 | 3.1:+45393501 | MS.gene04136:CDS |
| GAAGATTACCGTGTCATACC+GGG | 0.551295 | 3.1:+45393429 | MS.gene04136:CDS |
| TACCGTGTCATACCGGGCAT+GGG | 0.555700 | 3.1:+45393435 | MS.gene04136:CDS |
| AGAAATATGATGTTGGACTC+TGG | 0.555877 | 3.1:-45393174 | None:intergenic |
| TTGGACCCTATCCTTGGCAC+AGG | 0.556021 | 3.1:+45393020 | MS.gene04136:CDS |
| AGAATGAAGTCATCAAAAGC+TGG | 0.564855 | 3.1:-45391593 | None:intergenic |
| TGACATCTGAGATAGAGATT+GGG | 0.569124 | 3.1:+45393400 | MS.gene04136:CDS |
| TTACAATAACTTGACTGAGG+AGG | 0.569168 | 3.1:+45389963 | MS.gene04136:CDS |
| AGAAAGGCACGTGTTACTGT+TGG | 0.578877 | 3.1:+45393001 | MS.gene04136:CDS |
| CGCCCATGCCCGGTATGACA+CGG | 0.579280 | 3.1:-45393437 | None:intergenic |
| GACCATTGTCACCTTCTCTG+TGG | 0.583645 | 3.1:-45392854 | None:intergenic |
| CAAAAGTGATGCGTTAAGAA+GGG | 0.584050 | 3.1:+45390485 | MS.gene04136:CDS |
| GATTAACAAGCACAACTCGC+TGG | 0.584484 | 3.1:-45389617 | None:intergenic |
| ATGAAGATATTTGTTGACAC+AGG | 0.586048 | 3.1:+45390779 | MS.gene04136:CDS |
| AGGTTCTGTATACACGGGTG+TGG | 0.593614 | 3.1:+45392221 | MS.gene04136:intron |
| AATGTCCCGATCCTTCTCGC+TGG | 0.600283 | 3.1:-45391210 | None:intergenic |
| AAGCAAGTGATCACTCCCAC+TGG | 0.600893 | 3.1:+45392060 | MS.gene04136:CDS |
| ACACACCTATGACGAAAGGT+TGG | 0.603399 | 3.1:-45388587 | None:intergenic |
| CCAAAATTATAACATCTGAA+GGG | 0.611028 | 3.1:-45390709 | None:intergenic |
| ACTGTCATGAACCTGTGCCA+AGG | 0.615431 | 3.1:-45393031 | None:intergenic |
| ACTCCCGAACACGAGGATCG+TGG | 0.615840 | 3.1:-45390748 | None:intergenic |
| TGCCAAACGATATCTCAGAA+AGG | 0.623532 | 3.1:+45392985 | MS.gene04136:CDS |
| GAAAACACACCTATGACGAA+AGG | 0.624653 | 3.1:-45388591 | None:intergenic |
| AATGGCAGGTTCTGTATACA+CGG | 0.626497 | 3.1:+45392215 | MS.gene04136:intron |
| CAGGCGTGATACCAGCGAGA+AGG | 0.627099 | 3.1:+45391199 | MS.gene04136:CDS |
| GTTATGGACAAGTTGAAGCA+TGG | 0.627582 | 3.1:+45390423 | MS.gene04136:CDS |
| GGCTCCTAAAGGTGTACATG+TGG | 0.628140 | 3.1:+45393347 | MS.gene04136:intron |
| CATGTTGACCAAGCTTTGTG+CGG | 0.634982 | 3.1:-45391697 | None:intergenic |
| ATCCACAGAGAAGGTGACAA+TGG | 0.641587 | 3.1:+45392852 | MS.gene04136:CDS |
| GCCGATATCATCATACCTCG+TGG | 0.642641 | 3.1:+45391632 | MS.gene04136:CDS |
| GTGGTGTCTCTGTCATCAGA+AGG | 0.646781 | 3.1:+45392262 | MS.gene04136:CDS |
| TTCATCAACTCCCGAACACG+AGG | 0.650470 | 3.1:-45390755 | None:intergenic |
| AGATGATGATGAACAAGTAG+TGG | 0.657572 | 3.1:+45393485 | MS.gene04136:CDS |
| ATGGCAGGTTCTGTATACAC+GGG | 0.676045 | 3.1:+45392216 | MS.gene04136:intron |
| AGGTTGTAGAACATGGTTTG+GGG | 0.676716 | 3.1:+45392019 | MS.gene04136:intron |
| GATATCATCATACCTCGTGG+AGG | 0.736631 | 3.1:+45391635 | MS.gene04136:CDS |
| TCGTGGAGGAGATAATCATG+TGG | 0.738810 | 3.1:+45391649 | MS.gene04136:CDS |
| TTTGCTGCTATGCAGATACG+GGG | 0.754712 | 3.1:+45391845 | MS.gene04136:intron |
| ACATGATTATCTCCTCCACG+AGG | 0.810543 | 3.1:-45391647 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAGTTGTAAAAATTTAAAA+CGG | - | chr3.1:45389485-45389504 | None:intergenic | 10.0% |
| !! | ATGAAAATATTTAATCAAAA+TGG | - | chr3.1:45392320-45392339 | None:intergenic | 10.0% |
| !! | AAAAATTGAAAAATAAAGCA+TGG | - | chr3.1:45391423-45391442 | None:intergenic | 15.0% |
| !! | AAAATTGAAAAATAAAGCAT+GGG | - | chr3.1:45391422-45391441 | None:intergenic | 15.0% |
| !! | AAGAAATGATATAATCAATA+TGG | - | chr3.1:45391325-45391344 | None:intergenic | 15.0% |
| !! | AGAAATGATATAATCAATAT+GGG | - | chr3.1:45391324-45391343 | None:intergenic | 15.0% |
| !! | ATTTCTTTACTTATACAAAA+GGG | + | chr3.1:45393147-45393166 | MS.gene04136:CDS | 15.0% |
| !! | CAATAAAAAATATGAACTAA+AGG | - | chr3.1:45390816-45390835 | None:intergenic | 15.0% |
| !! | CATAAAAAAAATTCATTTCT+AGG | + | chr3.1:45393105-45393124 | MS.gene04136:intron | 15.0% |
| !! | TTAAAACAGCTAAAAAAAAA+AGG | - | chr3.1:45390526-45390545 | None:intergenic | 15.0% |
| !! | TTATTTGTAAATAGATACTT+AGG | + | chr3.1:45388857-45388876 | MS.gene04136:intron | 15.0% |
| !! | TTTACTTATTGAACTATTTA+AGG | - | chr3.1:45392639-45392658 | None:intergenic | 15.0% |
| !!! | ATGCTTTATTTTTCAATTTT+TGG | + | chr3.1:45391422-45391441 | MS.gene04136:intron | 15.0% |
| !!! | ATTTATTTATCTATTTTTGC+AGG | + | chr3.1:45389528-45389547 | MS.gene04136:intron | 15.0% |
| !!! | CTAGAAATGAATTTTTTTTA+TGG | - | chr3.1:45393107-45393126 | None:intergenic | 15.0% |
| !!! | TAGCATATGTTAATTTTATA+TGG | + | chr3.1:45390970-45390989 | MS.gene04136:intron | 15.0% |
| !!! | TGCTTTATTTTTCAATTTTT+GGG | + | chr3.1:45391423-45391442 | MS.gene04136:intron | 15.0% |
| !!! | TGTTTTTATAAACTTTCAAA+TGG | - | chr3.1:45392418-45392437 | None:intergenic | 15.0% |
| !!! | TTTCTCTTTTTTTTTTTGTT+TGG | + | chr3.1:45390141-45390160 | MS.gene04136:intron | 15.0% |
| !! | AAACGAAAAATAAGACAAAA+AGG | - | chr3.1:45389843-45389862 | None:intergenic | 20.0% |
| !! | AAATGATATAATCAATATGG+GGG | - | chr3.1:45391322-45391341 | None:intergenic | 20.0% |
| !! | AAATTAACATATGCTATGTA+TGG | - | chr3.1:45390966-45390985 | None:intergenic | 20.0% |
| !! | CACGTTAAAACAAAATAAAA+TGG | - | chr3.1:45390677-45390696 | None:intergenic | 20.0% |
| !! | GAAATGATATAATCAATATG+GGG | - | chr3.1:45391323-45391342 | None:intergenic | 20.0% |
| !! | GAATGAATGACATATAAATT+TGG | - | chr3.1:45391740-45391759 | None:intergenic | 20.0% |
| !! | GATTTCTTTACTTATACAAA+AGG | + | chr3.1:45393146-45393165 | MS.gene04136:CDS | 20.0% |
| !! | TATGAACTAAAGGAAATAAA+AGG | - | chr3.1:45390806-45390825 | None:intergenic | 20.0% |
| !! | TCAATGAATAAGAAATAAAG+AGG | - | chr3.1:45390182-45390201 | None:intergenic | 20.0% |
| !! | TGTACTTATATTGATACTTT+AGG | + | chr3.1:45389903-45389922 | MS.gene04136:intron | 20.0% |
| !!! | AATTTGGATATATTTTACAC+AGG | - | chr3.1:45391724-45391743 | None:intergenic | 20.0% |
| !!! | ATTAATTTTATTTCATCTCG+CGG | + | chr3.1:45390884-45390903 | MS.gene04136:intron | 20.0% |
| !!! | CTAAAAACCTAATATTTTGT+AGG | + | chr3.1:45388773-45388792 | MS.gene04136:intron | 20.0% |
| !!! | CTTTTACTTATTTTATAAGC+CGG | + | chr3.1:45391078-45391097 | MS.gene04136:intron | 20.0% |
| !!! | GAGATTTTATTACAAAGAAT+TGG | - | chr3.1:45389038-45389057 | None:intergenic | 20.0% |
| !!! | GCTTTATTTTTCAATTTTTG+GGG | + | chr3.1:45391424-45391443 | MS.gene04136:intron | 20.0% |
| !!! | TATGATTTTCTCATATTTTC+AGG | + | chr3.1:45393326-45393345 | MS.gene04136:intron | 20.0% |
| !!! | TTAATTTCATAATGCTGATT+TGG | + | chr3.1:45391368-45391387 | MS.gene04136:intron | 20.0% |
| !!! | TTTGTCTTATTTTTCGTTTT+TGG | + | chr3.1:45389844-45389863 | MS.gene04136:intron | 20.0% |
| ! | AAAGAAAATATTGTGCCTTA+AGG | + | chr3.1:45392656-45392675 | MS.gene04136:intron | 25.0% |
| ! | AAATAAGACAAAAAGGAAGA+AGG | - | chr3.1:45389836-45389855 | None:intergenic | 25.0% |
| ! | AATAAGACAAAAAGGAAGAA+GGG | - | chr3.1:45389835-45389854 | None:intergenic | 25.0% |
| ! | AATATTCCTCTAATTTCAGT+GGG | + | chr3.1:45392769-45392788 | MS.gene04136:intron | 25.0% |
| ! | AATGACTAAAGAACGAAAAA+AGG | - | chr3.1:45390217-45390236 | None:intergenic | 25.0% |
| ! | AATTATGAACGTATTAGTTG+AGG | + | chr3.1:45390247-45390266 | MS.gene04136:intron | 25.0% |
| ! | ACAAAATCAAAATGAACTCA+TGG | - | chr3.1:45391288-45391307 | None:intergenic | 25.0% |
| ! | ACAACAATATAAAACCTAGA+AGG | - | chr3.1:45388994-45389013 | None:intergenic | 25.0% |
| ! | AGTGACATAATCTCATAAAT+AGG | + | chr3.1:45389220-45389239 | MS.gene04136:intron | 25.0% |
| ! | ATAATATCCTGAAAATTGAC+AGG | + | chr3.1:45390284-45390303 | MS.gene04136:intron | 25.0% |
| ! | ATCATAATGTAACCAATCAA+AGG | - | chr3.1:45393312-45393331 | None:intergenic | 25.0% |
| ! | CAATATAAGTACAATAAGAC+AGG | - | chr3.1:45389896-45389915 | None:intergenic | 25.0% |
| ! | CATATCTATGCTTCATTTAT+TGG | + | chr3.1:45392915-45392934 | MS.gene04136:intron | 25.0% |
| ! | CCAAAATTATAACATCTGAA+GGG | - | chr3.1:45390712-45390731 | None:intergenic | 25.0% |
| ! | CGGCTTATAAAATAAGTAAA+AGG | - | chr3.1:45391080-45391099 | None:intergenic | 25.0% |
| ! | CTTAGTTCCTACAAAATATT+AGG | - | chr3.1:45388783-45388802 | None:intergenic | 25.0% |
| ! | GAGATTAAGAAATATGATGT+TGG | - | chr3.1:45393184-45393203 | None:intergenic | 25.0% |
| ! | TAATATTCCTCTAATTTCAG+TGG | + | chr3.1:45392768-45392787 | MS.gene04136:intron | 25.0% |
| ! | TATAATTTCACATCTTAGCA+AGG | - | chr3.1:45392701-45392720 | None:intergenic | 25.0% |
| ! | TCAAATAAGTCCAATTCAAA+CGG | - | chr3.1:45392363-45392382 | None:intergenic | 25.0% |
| ! | TCCAAAATTATAACATCTGA+AGG | - | chr3.1:45390713-45390732 | None:intergenic | 25.0% |
| ! | TGATATGCACTAAAAAAGAA+AGG | - | chr3.1:45390573-45390592 | None:intergenic | 25.0% |
| ! | TGTTTCTCAAAATGATCATT+GGG | + | chr3.1:45389706-45389725 | MS.gene04136:intron | 25.0% |
| ! | TTACTTAGCATTTAATATGC+AGG | + | chr3.1:45389312-45389331 | MS.gene04136:intron | 25.0% |
| ! | TTAGTATTTCAACAATGACA+CGG | - | chr3.1:45391112-45391131 | None:intergenic | 25.0% |
| !! | AAAATAAGTAAAAGGTACAC+AGG | - | chr3.1:45391072-45391091 | None:intergenic | 25.0% |
| !! | AATATTTTGTAGGAACTAAG+AGG | + | chr3.1:45388783-45388802 | MS.gene04136:intron | 25.0% |
| !! | CATTCTTTATCAGATTTTGA+CGG | + | chr3.1:45391503-45391522 | MS.gene04136:intron | 25.0% |
| !! | TCAGATGTTATAATTTTGGA+AGG | + | chr3.1:45390713-45390732 | MS.gene04136:CDS | 25.0% |
| !! | TTAAGAAGGGTATATATCTT+TGG | + | chr3.1:45390498-45390517 | MS.gene04136:intron | 25.0% |
| !! | TTAAGTTGTTTATCCAAACA+AGG | + | chr3.1:45392590-45392609 | MS.gene04136:intron | 25.0% |
| !! | TTGTTTCTCAAAATGATCAT+TGG | + | chr3.1:45389705-45389724 | MS.gene04136:intron | 25.0% |
| !! | TTGTTTTCATAAGCTATTCT+GGG | - | chr3.1:45392487-45392506 | None:intergenic | 25.0% |
| !! | TTTTTACAATAACTTGACTG+AGG | + | chr3.1:45389960-45389979 | MS.gene04136:CDS | 25.0% |
| !!! | ATCATTTCTTTTCAAGACTT+GGG | + | chr3.1:45391335-45391354 | MS.gene04136:intron | 25.0% |
| !!! | GATGTCACTATTTTAATTCT+TGG | - | chr3.1:45393387-45393406 | None:intergenic | 25.0% |
| !!! | TATCATTTCTTTTCAAGACT+TGG | + | chr3.1:45391334-45391353 | MS.gene04136:intron | 25.0% |
| !!! | TCTTTCGAGTAAATGAATTT+TGG | + | chr3.1:45391531-45391550 | MS.gene04136:intron | 25.0% |
| AAAAACAATCACATTGCAGA+GGG | - | chr3.1:45393258-45393277 | None:intergenic | 30.0% | |
| AAAGTTACCATGTTGAAACA+TGG | - | chr3.1:45392181-45392200 | None:intergenic | 30.0% | |
| AAGCATGGGTTTCATTATTA+AGG | - | chr3.1:45391408-45391427 | None:intergenic | 30.0% | |
| AATAAGCTGAAAACAGCATA+TGG | - | chr3.1:45392454-45392473 | None:intergenic | 30.0% | |
| AATCAAGTACGAAAAGGAAA+TGG | - | chr3.1:45392089-45392108 | None:intergenic | 30.0% | |
| AATGAAAGCTTGCAAGAAAA+TGG | - | chr3.1:45391776-45391795 | None:intergenic | 30.0% | |
| AATGACTTCATTACTACTTG+GGG | - | chr3.1:45388629-45388648 | None:intergenic | 30.0% | |
| AGCATATGATATTGTTGAAG+AGG | - | chr3.1:45389795-45389814 | None:intergenic | 30.0% | |
| AGTTAACTACTTAACATGAC+AGG | + | chr3.1:45389933-45389952 | MS.gene04136:intron | 30.0% | |
| ATAAATACAGAAGAGCGAAA+CGG | + | chr3.1:45388913-45388932 | MS.gene04136:intron | 30.0% | |
| ATATCGGCATATTTCTTTGT+TGG | - | chr3.1:45391620-45391639 | None:intergenic | 30.0% | |
| ATATTCCTCTAATTTCAGTG+GGG | + | chr3.1:45392770-45392789 | MS.gene04136:intron | 30.0% | |
| ATCATACATGATAAGATCCT+AGG | + | chr3.1:45389440-45389459 | MS.gene04136:intron | 30.0% | |
| ATGAAGAAGACAAAATCACA+TGG | - | chr3.1:45392143-45392162 | None:intergenic | 30.0% | |
| CAAATAAGTCCAATTCAAAC+GGG | - | chr3.1:45392362-45392381 | None:intergenic | 30.0% | |
| CAATGACTTCATTACTACTT+GGG | - | chr3.1:45388630-45388649 | None:intergenic | 30.0% | |
| CTATCACTTTCTAAATTGTG+TGG | + | chr3.1:45391962-45391981 | MS.gene04136:intron | 30.0% | |
| CTCAAAAATCAAGTACGAAA+AGG | - | chr3.1:45392095-45392114 | None:intergenic | 30.0% | |
| CTTAAATTATGCACTTGATC+AGG | + | chr3.1:45391999-45392018 | MS.gene04136:intron | 30.0% | |
| CTTATTCATTGACCAAAATG+TGG | + | chr3.1:45390190-45390209 | MS.gene04136:intron | 30.0% | |
| GCTTAAAATAATCGCTTAAC+AGG | - | chr3.1:45389358-45389377 | None:intergenic | 30.0% | |
| GTTTCTCAAAATGATCATTG+GGG | + | chr3.1:45389707-45389726 | MS.gene04136:intron | 30.0% | |
| TAACTCTTGAAGTCATACTT+TGG | - | chr3.1:45390465-45390484 | None:intergenic | 30.0% | |
| TCAATGACTTCATTACTACT+TGG | - | chr3.1:45388631-45388650 | None:intergenic | 30.0% | |
| TTTCTCAAAATGATCATTGG+GGG | + | chr3.1:45389708-45389727 | MS.gene04136:intron | 30.0% | |
| ! | AATTTTCCTACATCACATTG+TGG | - | chr3.1:45390935-45390954 | None:intergenic | 30.0% |
| ! | ATACGTTCATAATTTGTCTG+TGG | - | chr3.1:45390241-45390260 | None:intergenic | 30.0% |
| ! | ATGAAGATATTTGTTGACAC+AGG | + | chr3.1:45390779-45390798 | MS.gene04136:CDS | 30.0% |
| ! | CCCTTCAGATGTTATAATTT+TGG | + | chr3.1:45390709-45390728 | MS.gene04136:CDS | 30.0% |
| ! | TGTTTCAACATGGTAACTTT+TGG | + | chr3.1:45392181-45392200 | MS.gene04136:intron | 30.0% |
| !! | AAAATTTTGATCCACAGAGA+AGG | + | chr3.1:45392843-45392862 | MS.gene04136:CDS | 30.0% |
| !! | AAACTGACTTGTAAAGTAAC+TGG | - | chr3.1:45388741-45388760 | None:intergenic | 30.0% |
| !! | AAGTCAGCTGTTGATTTAAT+GGG | + | chr3.1:45388462-45388481 | MS.gene04136:CDS | 30.0% |
| !! | ATCACTTGCTTTTCTGTAAA+TGG | - | chr3.1:45392051-45392070 | None:intergenic | 30.0% |
| !! | CTTTACAAGTCAGTTTTGTA+AGG | + | chr3.1:45388745-45388764 | MS.gene04136:intron | 30.0% |
| !! | GCTGTAAAGGTATTAAGATT+GGG | + | chr3.1:45392820-45392839 | MS.gene04136:CDS | 30.0% |
| !! | GTTGTTTTCATAAGCTATTC+TGG | - | chr3.1:45392488-45392507 | None:intergenic | 30.0% |
| !! | TAAGTCAGCTGTTGATTTAA+TGG | + | chr3.1:45388461-45388480 | MS.gene04136:CDS | 30.0% |
| !! | TCATTTTTCTGGATTTCACA+TGG | + | chr3.1:45388500-45388519 | MS.gene04136:CDS | 30.0% |
| !! | TGCTGTAAAGGTATTAAGAT+TGG | + | chr3.1:45392819-45392838 | MS.gene04136:CDS | 30.0% |
| !!! | TCTTCTGAAGTTCATTTTTC+TGG | + | chr3.1:45388489-45388508 | MS.gene04136:CDS | 30.0% |
| !!! | TTTTGTTTTAACGTGTCTTC+AGG | + | chr3.1:45390682-45390701 | MS.gene04136:intron | 30.0% |
| AAAAGGAAATGGTTACCAGT+GGG | - | chr3.1:45392078-45392097 | None:intergenic | 35.0% | |
| AAAGAGACATCGAGGATTTA+AGG | - | chr3.1:45393227-45393246 | None:intergenic | 35.0% | |
| AATTCAAACGGGTCAATACT+TGG | - | chr3.1:45392351-45392370 | None:intergenic | 35.0% | |
| ACAAAAGTGATGCGTTAAGA+AGG | + | chr3.1:45390484-45390503 | MS.gene04136:CDS | 35.0% | |
| AGAAATATGATGTTGGACTC+TGG | - | chr3.1:45393177-45393196 | None:intergenic | 35.0% | |
| AGAATGAAGTCATCAAAAGC+TGG | - | chr3.1:45391596-45391615 | None:intergenic | 35.0% | |
| AGATACTTAGGTAGTTAGAG+AGG | + | chr3.1:45388869-45388888 | MS.gene04136:intron | 35.0% | |
| ATATCAGTTGCTGATGTTGT+TGG | - | chr3.1:45388561-45388580 | None:intergenic | 35.0% | |
| ATATGCATGCGAGCATATAA+AGG | - | chr3.1:45392900-45392919 | None:intergenic | 35.0% | |
| ATATGCTATGTATGGAGAGT+AGG | - | chr3.1:45390958-45390977 | None:intergenic | 35.0% | |
| CAAAAGTGATGCGTTAAGAA+GGG | + | chr3.1:45390485-45390504 | MS.gene04136:CDS | 35.0% | |
| CATAATCCACAATGTGATGT+AGG | + | chr3.1:45390926-45390945 | MS.gene04136:intron | 35.0% | |
| CTTTCTATTCATACACATCG+TGG | + | chr3.1:45389652-45389671 | MS.gene04136:intron | 35.0% | |
| CTTTGAATGTAGTTCACACA+GGG | + | chr3.1:45389069-45389088 | MS.gene04136:intron | 35.0% | |
| GAAAAACAATCACATTGCAG+AGG | - | chr3.1:45393259-45393278 | None:intergenic | 35.0% | |
| GAGGTGATAGAGATCATAAA+TGG | + | chr3.1:45388802-45388821 | MS.gene04136:intron | 35.0% | |
| GATTACAACTTTGATCATCC+TGG | + | chr3.1:45390003-45390022 | MS.gene04136:CDS | 35.0% | |
| GGAGATATGTTTCAGAGTTA+GGG | + | chr3.1:45389865-45389884 | MS.gene04136:intron | 35.0% | |
| GTTTGTACCATGTTTCAACA+TGG | + | chr3.1:45392171-45392190 | MS.gene04136:intron | 35.0% | |
| TCAATTTAGCAAAGCCACTT+CGG | - | chr3.1:45392616-45392635 | None:intergenic | 35.0% | |
| TCTTTGAATGTAGTTCACAC+AGG | + | chr3.1:45389068-45389087 | MS.gene04136:intron | 35.0% | |
| TGGAGATATGTTTCAGAGTT+AGG | + | chr3.1:45389864-45389883 | MS.gene04136:intron | 35.0% | |
| TTACAATAACTTGACTGAGG+AGG | + | chr3.1:45389963-45389982 | MS.gene04136:CDS | 35.0% | |
| TTTATTTCATCTCGCGGAAT+TGG | + | chr3.1:45390890-45390909 | MS.gene04136:intron | 35.0% | |
| TTTGGGGAATTATACCAGAA+GGG | + | chr3.1:45391440-45391459 | MS.gene04136:intron | 35.0% | |
| ! | ACATCACATTGTGGATTATG+AGG | - | chr3.1:45390926-45390945 | None:intergenic | 35.0% |
| ! | ACGAAAAAAGGTCCACATTT+TGG | - | chr3.1:45390205-45390224 | None:intergenic | 35.0% |
| ! | AGATGATGATGAACAAGTAG+TGG | + | chr3.1:45393485-45393504 | MS.gene04136:CDS | 35.0% |
| ! | AGGTGTGTTTTCTTATGACA+AGG | + | chr3.1:45388602-45388621 | MS.gene04136:intron | 35.0% |
| ! | ATCAGATGCTTTTGATACTG+AGG | + | chr3.1:45390389-45390408 | MS.gene04136:intron | 35.0% |
| ! | GAAGAATAATTGTACTGACC+AGG | - | chr3.1:45390024-45390043 | None:intergenic | 35.0% |
| ! | GATTTTTGTAAGAGGTTGTG+TGG | + | chr3.1:45392243-45392262 | MS.gene04136:CDS | 35.0% |
| ! | GTATTAGTCTAGCTCAATTC+TGG | + | chr3.1:45392284-45392303 | MS.gene04136:intron | 35.0% |
| ! | TGACATCTGAGATAGAGATT+GGG | + | chr3.1:45393400-45393419 | MS.gene04136:CDS | 35.0% |
| ! | TGTCATTCATTCGACTTTTC+AGG | + | chr3.1:45391748-45391767 | MS.gene04136:CDS | 35.0% |
| ! | TTCTGATCGTTTGATTCGAT+TGG | + | chr3.1:45391922-45391941 | MS.gene04136:CDS | 35.0% |
| ! | TTTAAAACGGTGCATCAAAG+CGG | - | chr3.1:45389472-45389491 | None:intergenic | 35.0% |
| ! | TTTTCTGGATTTCACATGGA+TGG | + | chr3.1:45388504-45388523 | MS.gene04136:CDS | 35.0% |
| !! | AAGTATTGACCCGTTTGAAT+TGG | + | chr3.1:45392350-45392369 | MS.gene04136:intron | 35.0% |
| !! | AATTTGCTGCTATGCAGATA+CGG | + | chr3.1:45391843-45391862 | MS.gene04136:intron | 35.0% |
| !! | TCATATTTTCAGGCTCCTAA+AGG | + | chr3.1:45393336-45393355 | MS.gene04136:intron | 35.0% |
| !! | TTTTGGGGAATTATACCAGA+AGG | + | chr3.1:45391439-45391458 | MS.gene04136:intron | 35.0% |
| !!! | CTTTTGGTGCTGTCTTTAAA+TGG | + | chr3.1:45392197-45392216 | MS.gene04136:intron | 35.0% |
| !!! | CTTTTTTGTGCTCCTTTGAT+TGG | + | chr3.1:45393297-45393316 | MS.gene04136:intron | 35.0% |
| AAAGTCGAAAAGAGACATCG+AGG | - | chr3.1:45393235-45393254 | None:intergenic | 40.0% | |
| AAGAACAAGCTTGACAGAAC+AGG | - | chr3.1:45389770-45389789 | None:intergenic | 40.0% | |
| AATGGCAGGTTCTGTATACA+CGG | + | chr3.1:45392215-45392234 | MS.gene04136:intron | 40.0% | |
| ACCTTTACAGCATGCTCTTA+AGG | - | chr3.1:45392811-45392830 | None:intergenic | 40.0% | |
| AGGTTGTAGAACATGGTTTG+GGG | + | chr3.1:45392019-45392038 | MS.gene04136:intron | 40.0% | |
| ATCATGTATGATAGCTGTGC+AGG | - | chr3.1:45389432-45389451 | None:intergenic | 40.0% | |
| CAATGACACGGAAAATCTAC+CGG | - | chr3.1:45391100-45391119 | None:intergenic | 40.0% | |
| CAGGTTGTAGAACATGGTTT+GGG | + | chr3.1:45392018-45392037 | MS.gene04136:intron | 40.0% | |
| CATACCACATGTACACCTTT+AGG | - | chr3.1:45393354-45393373 | None:intergenic | 40.0% | |
| CTTAGGTAGTTAGAGAGGAT+AGG | + | chr3.1:45388874-45388893 | MS.gene04136:intron | 40.0% | |
| GAAAACACACCTATGACGAA+AGG | - | chr3.1:45388594-45388613 | None:intergenic | 40.0% | |
| GAAAAGGAAATGGTTACCAG+TGG | - | chr3.1:45392079-45392098 | None:intergenic | 40.0% | |
| GCACAAAAATTCAACCCTTC+TGG | - | chr3.1:45391457-45391476 | None:intergenic | 40.0% | |
| GTAGTTAGAGAGGATAGGTA+CGG | + | chr3.1:45388879-45388898 | MS.gene04136:intron | 40.0% | |
| TAATTTCAGTGGGGAGAGTA+TGG | + | chr3.1:45392779-45392798 | MS.gene04136:intron | 40.0% | |
| TACAACCAACCTTTCGTCAT+AGG | + | chr3.1:45388582-45388601 | MS.gene04136:CDS | 40.0% | |
| TCCACGAGGTATGATGATAT+CGG | - | chr3.1:45391636-45391655 | None:intergenic | 40.0% | |
| TCTCACAAGTGCTTACATGT+CGG | - | chr3.1:45392395-45392414 | None:intergenic | 40.0% | |
| TGAAGATTACCGTGTCATAC+CGG | + | chr3.1:45393428-45393447 | MS.gene04136:CDS | 40.0% | |
| TGAGGAATTGCTTCGTGTTA+TGG | + | chr3.1:45390407-45390426 | MS.gene04136:CDS | 40.0% | |
| TGCCAAACGATATCTCAGAA+AGG | + | chr3.1:45392985-45393004 | MS.gene04136:CDS | 40.0% | |
| TTTCACATCTTAGCAAGGAG+AGG | - | chr3.1:45392696-45392715 | None:intergenic | 40.0% | |
| ! | ACATTGTGGATTATGAGGAG+CGG | - | chr3.1:45390921-45390940 | None:intergenic | 40.0% |
| ! | ATTTGCTGCTATGCAGATAC+GGG | + | chr3.1:45391844-45391863 | MS.gene04136:intron | 40.0% |
| ! | CGAGCATATAAAGGTACAGA+TGG | - | chr3.1:45392891-45392910 | None:intergenic | 40.0% |
| ! | CTTGATCAGGTTGTAGAACA+TGG | + | chr3.1:45392012-45392031 | MS.gene04136:intron | 40.0% |
| ! | GTGACATCTGAGATAGAGAT+TGG | + | chr3.1:45393399-45393418 | MS.gene04136:CDS | 40.0% |
| ! | GTTATGGACAAGTTGAAGCA+TGG | + | chr3.1:45390423-45390442 | MS.gene04136:CDS | 40.0% |
| ! | TCAGGTTGTAGAACATGGTT+TGG | + | chr3.1:45392017-45392036 | MS.gene04136:intron | 40.0% |
| !! | AGCTCAATTCTGGAGTTACA+TGG | + | chr3.1:45392294-45392313 | MS.gene04136:intron | 40.0% |
| !! | CTAGTCATTCGAGAGCATTA+GGG | + | chr3.1:45388945-45388964 | MS.gene04136:intron | 40.0% |
| !! | TGCCTTTCTGAGATATCGTT+TGG | - | chr3.1:45392990-45393009 | None:intergenic | 40.0% |
| !!! | GGATGGTTTTGAGAAAAGAG+AGG | + | chr3.1:45388521-45388540 | MS.gene04136:CDS | 40.0% |
| !!! | TCTATTTTTGCAGGTGTTGC+TGG | + | chr3.1:45389537-45389556 | MS.gene04136:intron | 40.0% |
| ACACACCTATGACGAAAGGT+TGG | - | chr3.1:45388590-45388609 | None:intergenic | 45.0% | |
| ACATCTTAGCAAGGAGAGGA+GGG | - | chr3.1:45392692-45392711 | None:intergenic | 45.0% | |
| ACATGATTATCTCCTCCACG+AGG | - | chr3.1:45391650-45391669 | None:intergenic | 45.0% | |
| ACTCTCCCCACTGAAATTAG+AGG | - | chr3.1:45392778-45392797 | None:intergenic | 45.0% | |
| AGAAGGTGACAATGGTCAAC+AGG | + | chr3.1:45392860-45392879 | MS.gene04136:CDS | 45.0% | |
| ATCCACAGAGAAGGTGACAA+TGG | + | chr3.1:45392852-45392871 | MS.gene04136:CDS | 45.0% | |
| ATGAACCTGTGCCAAGGATA+GGG | - | chr3.1:45393028-45393047 | None:intergenic | 45.0% | |
| ATGGCAGGTTCTGTATACAC+GGG | + | chr3.1:45392216-45392235 | MS.gene04136:intron | 45.0% | |
| ATTGACAGGCTAGCAGGATA+AGG | + | chr3.1:45390298-45390317 | MS.gene04136:intron | 45.0% | |
| CATAGATTGTCCACCACCAA+AGG | - | chr3.1:45388668-45388687 | None:intergenic | 45.0% | |
| CTGAAAATTGACAGGCTAGC+AGG | + | chr3.1:45390292-45390311 | MS.gene04136:intron | 45.0% | |
| CTGATGTTCGTTTGGCAAGA+AGG | + | chr3.1:45391174-45391193 | MS.gene04136:CDS | 45.0% | |
| GAAGATTACCGTGTCATACC+GGG | + | chr3.1:45393429-45393448 | MS.gene04136:CDS | 45.0% | |
| GAATTCGGAGATCGGTACTT+TGG | + | chr3.1:45393459-45393478 | MS.gene04136:CDS | 45.0% | |
| GACTACCTATCTGTGTCCTT+TGG | + | chr3.1:45388649-45388668 | MS.gene04136:intron | 45.0% | |
| GATATCATCATACCTCGTGG+AGG | + | chr3.1:45391635-45391654 | MS.gene04136:CDS | 45.0% | |
| GATTAACAAGCACAACTCGC+TGG | - | chr3.1:45389620-45389639 | None:intergenic | 45.0% | |
| TACCTATCTGTGTCCTTTGG+TGG | + | chr3.1:45388652-45388671 | MS.gene04136:intron | 45.0% | |
| TCGTGGAGGAGATAATCATG+TGG | + | chr3.1:45391649-45391668 | MS.gene04136:CDS | 45.0% | |
| TGCAGATGCTGATGTTCGTT+TGG | + | chr3.1:45391166-45391185 | MS.gene04136:intron | 45.0% | |
| TTACTGTTGGACCCTATCCT+TGG | + | chr3.1:45393014-45393033 | MS.gene04136:CDS | 45.0% | |
| TTATCCAAACAAGGCCGAAG+TGG | + | chr3.1:45392599-45392618 | MS.gene04136:intron | 45.0% | |
| TTCGTTTGGCAAGAAGGATC+AGG | + | chr3.1:45391180-45391199 | MS.gene04136:CDS | 45.0% | |
| TTTGCTGCTATGCAGATACG+GGG | + | chr3.1:45391845-45391864 | MS.gene04136:intron | 45.0% | |
| ! | AGAAAGGCACGTGTTACTGT+TGG | + | chr3.1:45393001-45393020 | MS.gene04136:CDS | 45.0% |
| ! | ATTGTGGATTATGAGGAGCG+GGG | - | chr3.1:45390919-45390938 | None:intergenic | 45.0% |
| ! | CATGTTGACCAAGCTTTGTG+CGG | - | chr3.1:45391700-45391719 | None:intergenic | 45.0% |
| ! | CATTGTGGATTATGAGGAGC+GGG | - | chr3.1:45390920-45390939 | None:intergenic | 45.0% |
| ! | CGGGTGTGGATTTTTGTAAG+AGG | + | chr3.1:45392235-45392254 | MS.gene04136:CDS | 45.0% |
| ! | GCCTTAAGAGCATGCTGTAA+AGG | + | chr3.1:45392807-45392826 | MS.gene04136:CDS | 45.0% |
| ! | GCGAGTTGTGCTTGTTAATC+AGG | + | chr3.1:45389620-45389639 | MS.gene04136:CDS | 45.0% |
| ! | TTTTCCACGATCCTCGTGTT+CGG | + | chr3.1:45390744-45390763 | MS.gene04136:CDS | 45.0% |
| !! | CATCAAAGCGGACTAAACCT+AGG | - | chr3.1:45389460-45389479 | None:intergenic | 45.0% |
| !! | CTGCTAGCCTGTCAATTTTC+AGG | - | chr3.1:45390294-45390313 | None:intergenic | 45.0% |
| !! | GCTAGTCATTCGAGAGCATT+AGG | + | chr3.1:45388944-45388963 | MS.gene04136:intron | 45.0% |
| !! | TGGTGCTGTCTTTAAATGGC+AGG | + | chr3.1:45392201-45392220 | MS.gene04136:intron | 45.0% |
| !!! | ATTTTTGCAGGTGTTGCTGG+TGG | + | chr3.1:45389540-45389559 | MS.gene04136:intron | 45.0% |
| !! | ATTTACAAATAATTAATTAA+TGG | - | chr3.1:45388849-45388868 | None:intergenic | 5.0% |
| AAGCAAGTGATCACTCCCAC+TGG | + | chr3.1:45392060-45392079 | MS.gene04136:CDS | 50.0% | |
| ACTGTCATGAACCTGTGCCA+AGG | - | chr3.1:45393034-45393053 | None:intergenic | 50.0% | |
| AGGGCGGTTACTTACCTTCT+AGG | + | chr3.1:45388977-45388996 | MS.gene04136:intron | 50.0% | |
| AGGTTCTGTATACACGGGTG+TGG | + | chr3.1:45392221-45392240 | MS.gene04136:intron | 50.0% | |
| ATCTTAGCAAGGAGAGGAGG+GGG | - | chr3.1:45392690-45392709 | None:intergenic | 50.0% | |
| CACATCTTAGCAAGGAGAGG+AGG | - | chr3.1:45392693-45392712 | None:intergenic | 50.0% | |
| CACCACCAAAGGACACAGAT+AGG | - | chr3.1:45388657-45388676 | None:intergenic | 50.0% | |
| CACGAGGATCGTGGAAAACA+AGG | - | chr3.1:45390742-45390761 | None:intergenic | 50.0% | |
| CATCTTAGCAAGGAGAGGAG+GGG | - | chr3.1:45392691-45392710 | None:intergenic | 50.0% | |
| CATGAACCTGTGCCAAGGAT+AGG | - | chr3.1:45393029-45393048 | None:intergenic | 50.0% | |
| CGGGTCAATACTTGGAAGCA+AGG | - | chr3.1:45392343-45392362 | None:intergenic | 50.0% | |
| CTATCTGTGTCCTTTGGTGG+TGG | + | chr3.1:45388655-45388674 | MS.gene04136:intron | 50.0% | |
| GACCATTGTCACCTTCTCTG+TGG | - | chr3.1:45392857-45392876 | None:intergenic | 50.0% | |
| GAGGGGGAGTTAGTTCCTTA+AGG | - | chr3.1:45392674-45392693 | None:intergenic | 50.0% | |
| GCCGATATCATCATACCTCG+TGG | + | chr3.1:45391632-45391651 | MS.gene04136:CDS | 50.0% | |
| GGTGACAATGGTCAACAGGT+TGG | + | chr3.1:45392864-45392883 | MS.gene04136:intron | 50.0% | |
| GTGATACCAGCGAGAAGGAT+CGG | + | chr3.1:45391204-45391223 | MS.gene04136:CDS | 50.0% | |
| GTGGTGTCTCTGTCATCAGA+AGG | + | chr3.1:45392262-45392281 | MS.gene04136:CDS | 50.0% | |
| TGATACCAGCGAGAAGGATC+GGG | + | chr3.1:45391205-45391224 | MS.gene04136:CDS | 50.0% | |
| TTCATCAACTCCCGAACACG+AGG | - | chr3.1:45390758-45390777 | None:intergenic | 50.0% | |
| TTTCCACGATCCTCGTGTTC+GGG | + | chr3.1:45390745-45390764 | MS.gene04136:CDS | 50.0% | |
| ! | GGCTCCTAAAGGTGTACATG+TGG | + | chr3.1:45393347-45393366 | MS.gene04136:intron | 50.0% |
| !! | AAAGCCACTTCGGCCTTGTT+TGG | - | chr3.1:45392606-45392625 | None:intergenic | 50.0% |
| !! | TCGAGAGCATTAGGGCCTTA+GGG | + | chr3.1:45388953-45388972 | MS.gene04136:intron | 50.0% |
| !! | TTCGAGAGCATTAGGGCCTT+AGG | + | chr3.1:45388952-45388971 | MS.gene04136:intron | 50.0% |
| AATGTCCCGATCCTTCTCGC+TGG | - | chr3.1:45391213-45391232 | None:intergenic | 55.0% | |
| AGCATTAGGGCCTTAGGGCA+GGG | + | chr3.1:45388958-45388977 | MS.gene04136:intron | 55.0% | |
| AGCGAGAAGGATCGGGACAT+TGG | + | chr3.1:45391212-45391231 | MS.gene04136:CDS | 55.0% | |
| ATACCGGGCATGGGCGAATT+CGG | + | chr3.1:45393444-45393463 | MS.gene04136:CDS | 55.0% | |
| CAGCACATCCGCACAAAGCT+TGG | + | chr3.1:45391689-45391708 | MS.gene04136:CDS | 55.0% | |
| GCATGGGCGAATTCGGAGAT+CGG | + | chr3.1:45393451-45393470 | MS.gene04136:CDS | 55.0% | |
| TAAGTAACCGCCCTGCCCTA+AGG | - | chr3.1:45388971-45388990 | None:intergenic | 55.0% | |
| TACCGTGTCATACCGGGCAT+GGG | + | chr3.1:45393435-45393454 | MS.gene04136:CDS | 55.0% | |
| TTACCGTGTCATACCGGGCA+TGG | + | chr3.1:45393434-45393453 | MS.gene04136:CDS | 55.0% | |
| TTGGACCCTATCCTTGGCAC+AGG | + | chr3.1:45393020-45393039 | MS.gene04136:CDS | 55.0% | |
| ACTCCCGAACACGAGGATCG+TGG | - | chr3.1:45390751-45390770 | None:intergenic | 60.0% | |
| ATTAGGGCCTTAGGGCAGGG+CGG | + | chr3.1:45388961-45388980 | MS.gene04136:intron | 60.0% | |
| CAGGCGTGATACCAGCGAGA+AGG | + | chr3.1:45391199-45391218 | MS.gene04136:CDS | 60.0% | |
| GAGCATTAGGGCCTTAGGGC+AGG | + | chr3.1:45388957-45388976 | MS.gene04136:intron | 60.0% | |
| TCTCCGAATTCGCCCATGCC+CGG | - | chr3.1:45393450-45393469 | None:intergenic | 60.0% | |
| ! | GTTGCTGGTGGTGCAGCATC+TGG | + | chr3.1:45389552-45389571 | MS.gene04136:CDS | 60.0% |
| CGCCCATGCCCGGTATGACA+CGG | - | chr3.1:45393440-45393459 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 45388450 | 45393521 | 45388450 | ID=MS.gene04136 |
| chr3.1 | mRNA | 45388450 | 45393521 | 45388450 | ID=MS.gene04136.t1;Parent=MS.gene04136 |
| chr3.1 | exon | 45388450 | 45388603 | 45388450 | ID=MS.gene04136.t1.exon1;Parent=MS.gene04136.t1 |
| chr3.1 | CDS | 45388450 | 45388603 | 45388450 | ID=cds.MS.gene04136.t1;Parent=MS.gene04136.t1 |
| chr3.1 | exon | 45389550 | 45389641 | 45389550 | ID=MS.gene04136.t1.exon2;Parent=MS.gene04136.t1 |
| chr3.1 | CDS | 45389550 | 45389641 | 45389550 | ID=cds.MS.gene04136.t1;Parent=MS.gene04136.t1 |
| chr3.1 | exon | 45389955 | 45390024 | 45389955 | ID=MS.gene04136.t1.exon3;Parent=MS.gene04136.t1 |
| chr3.1 | CDS | 45389955 | 45390024 | 45389955 | ID=cds.MS.gene04136.t1;Parent=MS.gene04136.t1 |
| chr3.1 | exon | 45390394 | 45390506 | 45390394 | ID=MS.gene04136.t1.exon4;Parent=MS.gene04136.t1 |
| chr3.1 | CDS | 45390394 | 45390506 | 45390394 | ID=cds.MS.gene04136.t1;Parent=MS.gene04136.t1 |
| chr3.1 | exon | 45390704 | 45390800 | 45390704 | ID=MS.gene04136.t1.exon5;Parent=MS.gene04136.t1 |
| chr3.1 | CDS | 45390704 | 45390800 | 45390704 | ID=cds.MS.gene04136.t1;Parent=MS.gene04136.t1 |
| chr3.1 | exon | 45391171 | 45391250 | 45391171 | ID=MS.gene04136.t1.exon6;Parent=MS.gene04136.t1 |
| chr3.1 | CDS | 45391171 | 45391250 | 45391171 | ID=cds.MS.gene04136.t1;Parent=MS.gene04136.t1 |
| chr3.1 | exon | 45391575 | 45391769 | 45391575 | ID=MS.gene04136.t1.exon7;Parent=MS.gene04136.t1 |
| chr3.1 | CDS | 45391575 | 45391769 | 45391575 | ID=cds.MS.gene04136.t1;Parent=MS.gene04136.t1 |
| chr3.1 | exon | 45391860 | 45391943 | 45391860 | ID=MS.gene04136.t1.exon8;Parent=MS.gene04136.t1 |
| chr3.1 | CDS | 45391860 | 45391943 | 45391860 | ID=cds.MS.gene04136.t1;Parent=MS.gene04136.t1 |
| chr3.1 | exon | 45392021 | 45392081 | 45392021 | ID=MS.gene04136.t1.exon9;Parent=MS.gene04136.t1 |
| chr3.1 | CDS | 45392021 | 45392081 | 45392021 | ID=cds.MS.gene04136.t1;Parent=MS.gene04136.t1 |
| chr3.1 | exon | 45392223 | 45392283 | 45392223 | ID=MS.gene04136.t1.exon10;Parent=MS.gene04136.t1 |
| chr3.1 | CDS | 45392223 | 45392283 | 45392223 | ID=cds.MS.gene04136.t1;Parent=MS.gene04136.t1 |
| chr3.1 | exon | 45392788 | 45392881 | 45392788 | ID=MS.gene04136.t1.exon11;Parent=MS.gene04136.t1 |
| chr3.1 | CDS | 45392788 | 45392881 | 45392788 | ID=cds.MS.gene04136.t1;Parent=MS.gene04136.t1 |
| chr3.1 | exon | 45392969 | 45393041 | 45392969 | ID=MS.gene04136.t1.exon12;Parent=MS.gene04136.t1 |
| chr3.1 | CDS | 45392969 | 45393041 | 45392969 | ID=cds.MS.gene04136.t1;Parent=MS.gene04136.t1 |
| chr3.1 | exon | 45393127 | 45393209 | 45393127 | ID=MS.gene04136.t1.exon13;Parent=MS.gene04136.t1 |
| chr3.1 | CDS | 45393127 | 45393209 | 45393127 | ID=cds.MS.gene04136.t1;Parent=MS.gene04136.t1 |
| chr3.1 | exon | 45393348 | 45393521 | 45393348 | ID=MS.gene04136.t1.exon14;Parent=MS.gene04136.t1 |
| chr3.1 | CDS | 45393348 | 45393521 | 45393348 | ID=cds.MS.gene04136.t1;Parent=MS.gene04136.t1 |
| Gene Sequence |
| Protein sequence |
