AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene041688

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene041688.t1 MTR_5g007630 86.755 755 83 3 1 754 1 739 0.0 1325
MS.gene041688.t1 MTR_6g075440 76.416 759 159 3 1 754 1 744 0.0 1192
MS.gene041688.t1 MTR_6g075440 76.416 759 159 3 1 754 1 744 0.0 1192
MS.gene041688.t1 MTR_6g075290 65.245 774 243 5 1 754 1 768 0.0 977
MS.gene041688.t1 MTR_6g477760 69.322 678 184 3 91 746 20 695 0.0 922
MS.gene041688.t1 MTR_6g075290 61.757 774 229 7 1 754 1 727 0.0 901
MS.gene041688.t1 MTR_6g075390 63.624 723 184 7 1 717 1 650 0.0 867
MS.gene041688.t1 MTR_6g075410 57.067 757 225 9 1 749 1 665 0.0 804
MS.gene041688.t1 MTR_6g075290 68.991 545 152 4 221 754 28 566 0.0 713
MS.gene041688.t1 MTR_6g076060 73.856 459 115 1 301 754 14 472 0.0 669
MS.gene041688.t1 MTR_3g109030 39.196 597 328 13 180 755 69 651 8.71e-135 416
MS.gene041688.t1 MTR_2g460590 39.353 587 317 15 180 743 39 609 1.27e-134 414
MS.gene041688.t1 MTR_3g091080 39.238 604 326 14 167 745 55 642 3.44e-134 414
MS.gene041688.t1 MTR_4g130820 39.182 587 323 11 184 751 99 670 1.20e-130 405
MS.gene041688.t1 MTR_4g058730 39.330 567 315 11 184 736 59 610 2.02e-130 401
MS.gene041688.t1 MTR_2g094860 38.648 577 325 12 184 746 77 638 9.80e-130 402
MS.gene041688.t1 MTR_1g028370 37.088 577 333 14 184 745 83 644 2.60e-127 396
MS.gene041688.t1 MTR_7g117310 37.866 581 327 12 184 745 29 594 9.38e-127 393
MS.gene041688.t1 MTR_7g117310 37.866 581 327 12 184 745 83 648 4.70e-126 393
MS.gene041688.t1 MTR_7g034605 37.393 583 329 12 180 741 40 607 5.72e-126 391
MS.gene041688.t1 MTR_7g117310 37.866 581 327 12 184 745 95 660 6.11e-126 393
MS.gene041688.t1 MTR_8g027755 36.116 587 331 11 183 744 84 651 6.15e-122 382
MS.gene041688.t1 MTR_1g064240 37.801 582 330 12 184 750 71 635 1.08e-120 379
MS.gene041688.t1 MTR_3g088875 37.094 585 328 14 180 741 32 599 2.80e-117 369
MS.gene041688.t1 MTR_8g464570 36.007 586 333 16 183 743 61 629 1.16e-109 348
MS.gene041688.t1 MTR_2g081110 34.364 582 341 13 184 743 63 625 5.25e-104 333
MS.gene041688.t1 MTR_7g012260 35.473 592 343 13 184 751 109 685 9.29e-96 313
MS.gene041688.t1 MTR_6g075320 51.376 327 72 7 1 301 1 266 1.55e-84 270
MS.gene041688.t1 MTR_6g075460 78.788 99 21 0 656 754 26 124 1.82e-44 158
MS.gene041688.t1 MTR_2g094810 43.925 107 58 2 266 371 15 120 7.66e-20 86.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene041688.t1 AT3G17700 58.031 772 291 9 2 752 3 762 0.0 859
MS.gene041688.t1 AT3G17690 56.421 732 292 10 33 751 9 726 0.0 816
MS.gene041688.t1 AT3G17700 57.879 679 253 9 2 659 3 669 0.0 759
MS.gene041688.t1 AT3G17690 55.660 636 257 9 33 655 9 632 0.0 700
MS.gene041688.t1 AT3G17690 52.601 519 229 7 29 537 5 516 0.0 531
MS.gene041688.t1 AT1G19780 41.796 579 302 13 184 741 97 661 4.28e-137 422
MS.gene041688.t1 AT5G53130 40.000 570 306 11 184 736 84 634 9.45e-136 418
MS.gene041688.t1 AT2G24610 40.034 592 321 15 184 755 72 649 1.54e-132 410
MS.gene041688.t1 AT4G30360 38.842 587 325 13 180 746 67 639 4.26e-132 409
MS.gene041688.t1 AT1G15990 40.986 588 307 14 184 749 90 659 5.26e-132 409
MS.gene041688.t1 AT1G01340 38.176 592 322 15 183 751 62 632 5.40e-132 408
MS.gene041688.t1 AT2G24610 39.865 592 322 14 184 755 87 664 5.71e-132 409
MS.gene041688.t1 AT1G01340 38.176 592 322 15 183 751 67 637 7.14e-132 408
MS.gene041688.t1 AT2G28260 39.024 574 317 12 184 741 28 584 5.91e-131 403
MS.gene041688.t1 AT2G28260 39.024 574 317 12 184 741 68 624 2.40e-130 403
MS.gene041688.t1 AT4G01010 37.543 586 335 11 183 751 67 638 2.48e-130 403
MS.gene041688.t1 AT4G01010 37.543 586 335 11 183 751 67 638 2.48e-130 403
MS.gene041688.t1 AT4G30560 40.301 598 305 13 184 751 77 652 8.33e-129 400
MS.gene041688.t1 AT4G30560 40.301 598 305 13 184 751 77 652 8.33e-129 400
MS.gene041688.t1 AT4G30560 40.301 598 305 13 184 751 77 652 8.33e-129 400
MS.gene041688.t1 AT4G30560 40.301 598 305 13 184 751 103 678 1.84e-128 399
MS.gene041688.t1 AT4G30560 40.301 598 305 13 184 751 103 678 1.84e-128 399
MS.gene041688.t1 AT2G23980 39.931 581 310 12 184 741 76 640 1.50e-126 394
MS.gene041688.t1 AT2G23980 39.931 581 310 12 184 741 103 667 1.97e-126 395
MS.gene041688.t1 AT2G23980 39.931 581 310 12 184 741 103 667 1.97e-126 395
MS.gene041688.t1 AT2G23980 39.931 581 310 12 184 741 103 667 1.97e-126 395
MS.gene041688.t1 AT2G23980 39.931 581 310 12 184 741 103 667 1.97e-126 395
MS.gene041688.t1 AT2G23980 39.931 581 310 12 184 741 103 667 1.97e-126 395
MS.gene041688.t1 AT5G57940 39.483 580 313 13 184 741 81 644 1.70e-125 391
MS.gene041688.t1 AT5G57940 39.483 580 313 13 184 741 88 651 2.60e-125 391
MS.gene041688.t1 AT5G57940 39.483 580 313 13 184 741 88 651 2.60e-125 391
MS.gene041688.t1 AT5G14870 36.218 624 352 15 147 744 3 606 1.97e-121 380
MS.gene041688.t1 AT2G23980 38.576 604 309 13 184 741 103 690 3.65e-121 382
MS.gene041688.t1 AT2G23980 38.576 604 309 13 184 741 103 690 3.65e-121 382
MS.gene041688.t1 AT2G23980 38.576 604 309 13 184 741 103 690 3.65e-121 382
MS.gene041688.t1 AT2G23980 38.576 604 309 13 184 741 103 690 3.65e-121 382
MS.gene041688.t1 AT3G48010 36.570 618 347 16 151 743 16 613 1.21e-119 375
MS.gene041688.t1 AT2G46430 37.605 593 329 15 184 751 72 648 6.98e-119 374
MS.gene041688.t1 AT2G46430 37.605 593 329 15 184 751 72 648 6.98e-119 374
MS.gene041688.t1 AT5G54250 34.014 588 344 15 184 743 79 650 3.54e-102 330
MS.gene041688.t1 AT5G54250 34.014 588 344 15 184 743 79 650 3.54e-102 330
MS.gene041688.t1 AT5G54250 34.014 588 344 15 184 743 79 650 3.54e-102 330
MS.gene041688.t1 AT5G15410 36.851 578 326 10 184 735 113 677 8.69e-102 329
MS.gene041688.t1 AT5G15410 36.851 578 326 10 184 735 112 676 1.22e-101 329
MS.gene041688.t1 AT5G54250 33.901 587 341 16 184 743 79 645 1.73e-99 322
MS.gene041688.t1 AT1G19780 40.821 463 239 13 300 741 2 450 1.57e-96 310
MS.gene041688.t1 AT2G46450 31.803 588 344 14 190 750 35 592 9.79e-90 295
MS.gene041688.t1 AT2G46450 31.803 588 344 14 190 750 35 592 9.79e-90 295
MS.gene041688.t1 AT2G46440 33.110 598 338 16 190 751 35 606 1.69e-89 294
MS.gene041688.t1 AT2G46450 31.463 588 323 16 190 750 22 556 5.07e-82 274
MS.gene041688.t1 AT2G46450 31.293 588 324 15 190 750 35 569 1.28e-81 273
MS.gene041688.t1 AT2G46440 35.845 438 224 14 349 751 13 428 1.51e-62 216

Find 169 sgRNAs with CRISPR-Local

Find 395 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTGCTCTTCATGGATTCC+TGG 0.225119 6.3:+69913256 MS.gene041688:CDS
CAGTTCCACAATTCTCTTTA+CGG 0.255278 6.3:+69913199 MS.gene041688:intron
AATATGTGTATGCACTCTTT+TGG 0.256005 6.3:+69915164 MS.gene041688:CDS
GTTTATTGTGCGTGGAAAAT+TGG 0.274539 6.3:+69917227 MS.gene041688:CDS
TTCCATTCCTATGGCTTCTC+TGG 0.284126 6.3:+69912561 MS.gene041688:CDS
GGTTCATGCTGGTACCTCTT+TGG 0.298958 6.3:+69914367 MS.gene041688:CDS
GAGTCAAGGGTTGTTGGTGC+TGG 0.301405 6.3:+69913849 MS.gene041688:CDS
TACGGCGACGCCAAAGGTTA+TGG 0.319150 6.3:+69913217 MS.gene041688:CDS
ATGTCTGTCTGGAGATCTTC+TGG 0.319596 6.3:-69916767 None:intergenic
TGAAAAGGATTTCCAGTTGC+AGG 0.328009 6.3:-69912685 None:intergenic
TGAACAATCTGGGAATATAT+TGG 0.331276 6.3:-69914234 None:intergenic
GCTTACCAGAAGAACTTAAA+AGG 0.333543 6.3:+69916555 MS.gene041688:CDS
AAGGGGTGTTCCTGAGAAAA+TGG 0.334550 6.3:+69916730 MS.gene041688:CDS
ATACAGACGACATACATTAA+AGG 0.335319 6.3:+69917162 MS.gene041688:CDS
TCCTAGACGTAGAAGATTCT+TGG 0.335613 6.3:-69914203 None:intergenic
GGACCACTCATTTGGCTAAC+AGG 0.342078 6.3:-69912649 None:intergenic
CAGAACTTTCTTCAGGCTCT+TGG 0.347851 6.3:+69916239 MS.gene041688:CDS
GGCAGGCTGAACGGTATAGC+TGG 0.348290 6.3:+69916699 MS.gene041688:CDS
AATTGCGACCAAGCAAAATA+TGG 0.348527 6.3:-69913329 None:intergenic
CTAGGTATGAATCACCTTAC+TGG 0.350130 6.3:+69918140 MS.gene041688:intron
CTGGTACCTCTTTGGCCTAC+AGG 0.356505 6.3:+69914375 MS.gene041688:CDS
ATGCTATCCGGCCATGTTGT+TGG 0.360446 6.3:+69914346 MS.gene041688:CDS
TCACGAATGGCGTCTAAGAT+AGG 0.365376 6.3:-69917132 None:intergenic
TTATATGTTTCTCCTGCAAC+TGG 0.380870 6.3:+69912673 MS.gene041688:CDS
TTTATCCTACCAAGTTCCTT+GGG 0.382855 6.3:+69914160 MS.gene041688:CDS
CCAAGTTCCTTGGGGTCATC+AGG 0.385649 6.3:+69914169 MS.gene041688:CDS
AAACATACAGAACTTTCTTC+AGG 0.386919 6.3:+69916232 MS.gene041688:CDS
CATATAATGGACCACTCATT+TGG 0.387452 6.3:-69912657 None:intergenic
CGATGCATGGATCCAGGATC+AGG 0.389399 6.3:+69915045 MS.gene041688:CDS
CTCTTTACAATGTCCATCAT+AGG 0.393451 6.3:+69916176 MS.gene041688:CDS
TGAAGAATTCAAACAATCAT+TGG 0.398668 6.3:-69915071 None:intergenic
CGTGGGAGAGGATGGAATTC+CGG 0.399315 6.3:+69917254 MS.gene041688:CDS
AGTCAAGGGTTGTTGGTGCT+GGG 0.402836 6.3:+69913850 MS.gene041688:CDS
ATTTATCCTACCAAGTTCCT+TGG 0.403214 6.3:+69914159 MS.gene041688:CDS
TGCTTCAATTTCCATTCCTA+TGG 0.403389 6.3:+69912552 MS.gene041688:CDS
GAGGGTTAACCAATGTTTGC+GGG 0.406787 6.3:+69914964 MS.gene041688:intron
TTCAGGTTGCATGGAGATAC+AGG 0.409660 6.3:+69918185 MS.gene041688:CDS
TGTTCCTGAGAAAATGGTTC+TGG 0.409988 6.3:+69916736 MS.gene041688:CDS
TTGGAGAGCGTGGGAGAGGA+TGG 0.414887 6.3:+69917246 MS.gene041688:CDS
CCAGTATGTCCGACAAGATT+CGG 0.420399 6.3:-69912601 None:intergenic
TACAATGTCCATCATAGGAT+TGG 0.422433 6.3:+69916181 MS.gene041688:CDS
TGTTGTATCACCTCTTCCTC+AGG 0.425740 6.3:+69913941 MS.gene041688:CDS
ATCTGGGAATATATTGGATA+AGG 0.426709 6.3:-69914228 None:intergenic
AGGAAGTAAAATTCTCAGTC+AGG 0.426764 6.3:+69917182 MS.gene041688:CDS
GATTGTTTGAATTCTTCATC+TGG 0.430611 6.3:+69915076 MS.gene041688:CDS
TTGCGGAGCCCTCGTGTTCA+AGG 0.432055 6.3:+69917584 MS.gene041688:CDS
ACCATTATATTATTCTGAAA+AGG 0.432782 6.3:-69912700 None:intergenic
AATCATTGGAGCCCTGATCC+TGG 0.432839 6.3:-69915057 None:intergenic
TCTCCTGAGTCAAGGGTTGT+TGG 0.433479 6.3:+69913843 MS.gene041688:CDS
TAGGGTCATCCTCAGCCATA+TGG 0.436659 6.3:-69917113 None:intergenic
CCGAATCTTGTCGGACATAC+TGG 0.438252 6.3:+69912601 MS.gene041688:CDS
GATTCATATTCGAGTCAGCC+TGG 0.449287 6.3:+69914293 MS.gene041688:CDS
TCCCACTATATTTGATCCTA+AGG 0.449902 6.3:+69912891 MS.gene041688:CDS
GTTGCAGGAGAAACATATAA+TGG 0.451561 6.3:-69912670 None:intergenic
CCTGATGACCCCAAGGAACT+TGG 0.451927 6.3:-69914169 None:intergenic
TACCTTAGGATCAAATATAG+TGG 0.452744 6.3:-69912893 None:intergenic
TCAAATATAGTGGGAGCTCT+TGG 0.453330 6.3:-69912883 None:intergenic
CAGAATAATATAATGGTGGC+AGG 0.458139 6.3:+69912706 MS.gene041688:CDS
ACAATGTCCATCATAGGATT+GGG 0.458826 6.3:+69916182 MS.gene041688:CDS
TCCCCTTCTGATAACGGAAC+CGG 0.459445 6.3:-69917273 None:intergenic
AATGAACACTTGTTAAGGTC+TGG 0.463846 6.3:+69912787 MS.gene041688:CDS
CTTATGTTTCTCCTGAGTCA+AGG 0.468126 6.3:+69913835 MS.gene041688:CDS
TGGTTAAGCATCTTACTGTT+CGG 0.472124 6.3:-69917496 None:intergenic
CTTCTTACTCTATGTGGAGA+AGG 0.474707 6.3:+69913372 MS.gene041688:CDS
TTATGTTTCTCCTGAGTCAA+GGG 0.478763 6.3:+69913836 MS.gene041688:CDS
CCACGTGTTTCTGACAGAAT+CGG 0.483690 6.3:-69912469 None:intergenic
GTCATGCAGGAGAGTGCGGC+AGG 0.485642 6.3:+69916682 MS.gene041688:intron
AAAATTGGAGAGCGTGGGAG+AGG 0.488933 6.3:+69917242 MS.gene041688:CDS
TCTCTTGAACATTCTTCTCC+AGG 0.489405 6.3:+69913586 MS.gene041688:CDS
GTATAGCTGGGCTGCAACAA+GGG 0.492460 6.3:+69916712 MS.gene041688:CDS
GTAGGGCAAGTAGTACAATA+AGG 0.498528 6.3:-69912832 None:intergenic
CTAATTGGTCAGTCTCCAAC+CGG 0.500012 6.3:+69914271 MS.gene041688:CDS
TATTAACAAATTTGAAGAGA+TGG 0.501093 6.3:-69916796 None:intergenic
GCCATGTTGTTGGTTCATGC+TGG 0.504222 6.3:+69914356 MS.gene041688:CDS
CCTTCAGAAGAAACATTTCG+AGG 0.504344 6.3:+69912521 MS.gene041688:CDS
CAAGCATCCCCTTCTGATAA+CGG 0.505912 6.3:-69917279 None:intergenic
CCTCGAAATGTTTCTTCTGA+AGG 0.507653 6.3:-69912521 None:intergenic
ATTTATAATGAAATTTGCCC+AGG 0.509046 6.3:-69914311 None:intergenic
AAGATATATACCTGAGGAAG+AGG 0.510516 6.3:-69913951 None:intergenic
GCGTGAGGATTCATAACTCC+AGG 0.511604 6.3:-69913274 None:intergenic
AAAATAAAGCTTCACGGCCA+GGG 0.512104 6.3:+69917461 MS.gene041688:CDS
GGCTGACTCGAATATGAATC+CGG 0.516192 6.3:-69914290 None:intergenic
TTATAACGATGCATGGATCC+AGG 0.520942 6.3:+69915039 MS.gene041688:CDS
GATGGCGTCTTATGTCTGTC+TGG 0.521052 6.3:-69916778 None:intergenic
TGAGCAACTTTGAAGTAAGT+AGG 0.522470 6.3:-69912850 None:intergenic
GTCAAGGGTTGTTGGTGCTG+GGG 0.527130 6.3:+69913851 MS.gene041688:CDS
ATTGTCATTATAACGATGCA+TGG 0.527459 6.3:+69915032 MS.gene041688:CDS
TTGTTAAGGTCTGGACAACT+AGG 0.527946 6.3:+69912796 MS.gene041688:CDS
GCAGCGTTATAAATTCCATA+AGG 0.528890 6.3:-69915106 None:intergenic
ACCCTAGTTTCTATCGTAAG+TGG 0.530830 6.3:-69915133 None:intergenic
GGTATAGCTGGGCTGCAACA+AGG 0.531544 6.3:+69916711 MS.gene041688:CDS
CACGAATGGCGTCTAAGATA+GGG 0.533961 6.3:-69917131 None:intergenic
CTCGTGTTCAAGGAGTTATA+AGG 0.533997 6.3:+69917594 MS.gene041688:CDS
TCTCTTTACGGCGACGCCAA+AGG 0.534502 6.3:+69913211 MS.gene041688:CDS
GAGAGACAACCGAATCTTGT+CGG 0.535932 6.3:+69912592 MS.gene041688:CDS
GCAGGCTGAACGGTATAGCT+GGG 0.536872 6.3:+69916700 MS.gene041688:CDS
AGAGGGTTAACCAATGTTTG+CGG 0.537367 6.3:+69914963 MS.gene041688:intron
CAAGAGTCCCAATCCTATGA+TGG 0.538094 6.3:-69916189 None:intergenic
ATGGTGGCAGGAAACAAAGT+AGG 0.538949 6.3:+69912718 MS.gene041688:CDS
CAGCAAATCAGTACTCTGGC+TGG 0.539258 6.3:+69916119 MS.gene041688:intron
GGGTGGTCTTGTACAGAAGA+TGG 0.547676 6.3:+69917203 MS.gene041688:CDS
GGCAGGCATCCCGCAAACAT+TGG 0.547918 6.3:-69914973 None:intergenic
TACTCACCTGTAGGCCAAAG+AGG 0.550263 6.3:-69914381 None:intergenic
GACTCGAATATGAATCCGGT+TGG 0.550956 6.3:-69914286 None:intergenic
GAGCAACTTTGAAGTAAGTA+GGG 0.552043 6.3:-69912849 None:intergenic
TACCACTTACGATAGAAACT+AGG 0.552629 6.3:+69915131 MS.gene041688:CDS
ACCTTAGGATCAAATATAGT+GGG 0.553778 6.3:-69912892 None:intergenic
AGGGTCATCCTCAGCCATAT+GGG 0.559056 6.3:-69917112 None:intergenic
CAAACAGAATTCAGGTTGCA+TGG 0.560432 6.3:+69918176 MS.gene041688:CDS
TCCGGTTCCGTTATCAGAAG+GGG 0.560727 6.3:+69917272 MS.gene041688:CDS
GGAGAGTGCGGCAGGCTGAA+CGG 0.561282 6.3:+69916690 MS.gene041688:intron
AGATTCGGTTGTCTCTCGTA+TGG 0.562667 6.3:-69912586 None:intergenic
ATTCCGGTTCCGTTATCAGA+AGG 0.567052 6.3:+69917270 MS.gene041688:CDS
ACTTCCCACACAAAATAGCT+TGG 0.569266 6.3:-69916152 None:intergenic
GCCAAGAATCTTCTACGTCT+AGG 0.570401 6.3:+69914202 MS.gene041688:CDS
ACTTTCTTCAGGCTCTTGGA+CGG 0.570515 6.3:+69916243 MS.gene041688:CDS
GGAAGTAAAATTCTCAGTCA+GGG 0.572657 6.3:+69917183 MS.gene041688:CDS
CTTCTGAAGGTAGAATCTTG+AGG 0.578165 6.3:-69912508 None:intergenic
GCACCAACAACCCTTGACTC+AGG 0.578857 6.3:-69913846 None:intergenic
CTTCTTCAATGTCTTTAGCA+CGG 0.579605 6.3:-69917538 None:intergenic
CTGTATTAGTCTCTCACGAA+TGG 0.579807 6.3:-69917145 None:intergenic
AATACAGCAAATCAGTACTC+TGG 0.582109 6.3:+69916115 MS.gene041688:intron
GTTCTTCTGGTAAGCGACGA+TGG 0.583542 6.3:-69916547 None:intergenic
TGGTGGCAGGAAACAAAGTA+GGG 0.584856 6.3:+69912719 MS.gene041688:CDS
ATCTGTCATGCAGGAGAGTG+CGG 0.585800 6.3:+69916678 MS.gene041688:intron
AGTTAGATTAGTACGATGGC+AGG 0.586447 6.3:-69914990 None:intergenic
TTCTTCAGGCTCTTGGACGG+AGG 0.589094 6.3:+69916246 MS.gene041688:CDS
TGTTGTACAACTTTCGCGTG+AGG 0.589116 6.3:-69913289 None:intergenic
ATTCATATTCGAGTCAGCCT+GGG 0.590159 6.3:+69914294 MS.gene041688:CDS
GCATGAACCAACAACATGGC+CGG 0.590290 6.3:-69914353 None:intergenic
GTGGTGAAGAACTTCTAAGA+TGG 0.591370 6.3:+69917301 MS.gene041688:CDS
GCTGCAAAAGATCTCCAGTA+AGG 0.593899 6.3:-69918154 None:intergenic
ATCCAGAGAAGCCATAGGAA+TGG 0.596327 6.3:-69912563 None:intergenic
ACCACTTACGATAGAAACTA+GGG 0.602596 6.3:+69915132 MS.gene041688:CDS
TTCCGGTTCCGTTATCAGAA+GGG 0.604864 6.3:+69917271 MS.gene041688:CDS
GAAGAAACATTTCGAGGACA+CGG 0.606041 6.3:+69912527 MS.gene041688:CDS
AAGATGGTGTTTATTGTGCG+TGG 0.607353 6.3:+69917219 MS.gene041688:CDS
CAAGTGTTGTTGCCATTGCG+TGG 0.607532 6.3:-69913532 None:intergenic
AGGGTAGAAATGCAACTTAG+AGG 0.611605 6.3:+69916500 MS.gene041688:CDS
TATAGCTGGGCTGCAACAAG+GGG 0.614780 6.3:+69916713 MS.gene041688:CDS
ACGCGAAAGTTGTACAACAA+TGG 0.616709 6.3:+69913293 MS.gene041688:CDS
GATGCATGGATCCAGGATCA+GGG 0.616800 6.3:+69915046 MS.gene041688:CDS
CTTATAACTCCTTGAACACG+AGG 0.618090 6.3:-69917593 None:intergenic
TTCGGTCGCTAGTCAAACCC+TGG 0.621807 6.3:-69917478 None:intergenic
TATTCGAATCAACCACGCAA+TGG 0.622474 6.3:+69913520 MS.gene041688:CDS
CGTCGCCGTAAAGAGAATTG+TGG 0.623740 6.3:-69913204 None:intergenic
GCGTGGAAAATTGGAGAGCG+TGG 0.627011 6.3:+69917236 MS.gene041688:CDS
GAACAGTCTTCTGAAAGCAA+AGG 0.627118 6.3:+69917330 MS.gene041688:CDS
TTATCAGAAGGGGATGCTTG+TGG 0.631551 6.3:+69917282 MS.gene041688:CDS
ATGACCCCAAGGAACTTGGT+AGG 0.631622 6.3:-69914165 None:intergenic
TATGGATCCAGAGAAGCCAT+AGG 0.636832 6.3:-69912568 None:intergenic
TTATCCTACCAAGTTCCTTG+GGG 0.643481 6.3:+69914161 MS.gene041688:CDS
AGTTGTACAACAATGGAACA+AGG 0.646393 6.3:+69913300 MS.gene041688:CDS
AGTAAGATGCTTAACCAATG+TGG 0.646548 6.3:+69917502 MS.gene041688:CDS
ACCAGCATGAACCAACAACA+TGG 0.650102 6.3:-69914357 None:intergenic
ATTTGCTCCTGATGACCCCA+AGG 0.652468 6.3:-69914176 None:intergenic
CGTGGAAAATTGGAGAGCGT+GGG 0.654770 6.3:+69917237 MS.gene041688:CDS
GAGTGAAAATGCCTCCACAT+TGG 0.657412 6.3:-69917516 None:intergenic
AAGATGCTTAACCAATGTGG+AGG 0.669911 6.3:+69917505 MS.gene041688:CDS
ATGCAGTTAGATTAGTACGA+TGG 0.682323 6.3:-69914994 None:intergenic
GGAGACTGACCAATTAGCAG+AGG 0.684915 6.3:-69914265 None:intergenic
CCGATTCTGTCAGAAACACG+TGG 0.688656 6.3:+69912469 MS.gene041688:CDS
ACTCCTGTTAGCCAAATGAG+TGG 0.689485 6.3:+69912646 MS.gene041688:CDS
AGTAAAATTCTCAGTCAGGG+TGG 0.692049 6.3:+69917186 MS.gene041688:CDS
GAGGTCGTGATGTTGAGCAG+TGG 0.707063 6.3:+69916519 MS.gene041688:CDS
CTGGTCCGCTTCGTACCACG+AGG 0.714352 6.3:+69912620 MS.gene041688:CDS
GGTGGCAGGAAACAAAGTAG+GGG 0.730305 6.3:+69912720 MS.gene041688:CDS
ACTTACGATAGAAACTAGGG+TGG 0.738390 6.3:+69915135 MS.gene041688:CDS
TTATAACTCCTTGAACACGA+GGG 0.753036 6.3:-69917592 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAAATTATATTTTTAAAAAA+AGG - chr6.3:69913014-69913033 None:intergenic 0.0%
!! CATTTAATATTATAAAAAAG+GGG + chr6.3:69915960-69915979 MS.gene041688:intron 10.0%
!! AAAACAAATCTATCAAATAA+TGG + chr6.3:69916622-69916641 MS.gene041688:intron 15.0%
!! ACAAGAAAATTCAAATAATT+TGG + chr6.3:69915500-69915519 MS.gene041688:intron 15.0%
!! ATATAAAAGTCTATTACTTT+AGG - chr6.3:69912927-69912946 None:intergenic 15.0%
!! ATGTCTATTTGAAAATAATT+TGG + chr6.3:69915697-69915716 MS.gene041688:intron 15.0%
!! ATTAAGCATACTATTTATTA+AGG - chr6.3:69914027-69914046 None:intergenic 15.0%
!! TTTATGTTTATGTTAATTGT+TGG + chr6.3:69916288-69916307 MS.gene041688:intron 15.0%
!!! AAAATCAATTTTTGTTATCA+CGG - chr6.3:69916346-69916365 None:intergenic 15.0%
!!! AAATAATGGATTACTTATTA+TGG + chr6.3:69916636-69916655 MS.gene041688:intron 15.0%
!!! ATTATTTGATAGATTTGTTT+TGG - chr6.3:69916623-69916642 None:intergenic 15.0%
!!! GTTTAAAATAGTAGTTAATA+AGG + chr6.3:69915782-69915801 MS.gene041688:intron 15.0%
!!! TATCAAGATTTTAAAATGAA+AGG - chr6.3:69916455-69916474 None:intergenic 15.0%
!!! TCAAACTTGTTTAATATAAT+TGG - chr6.3:69917026-69917045 None:intergenic 15.0%
!!! TTTGAAAATAATTTGGATTT+TGG + chr6.3:69915704-69915723 MS.gene041688:intron 15.0%
!! AAACATGAAAAATGTATGAT+TGG - chr6.3:69913169-69913188 None:intergenic 20.0%
!! AAAGTAATGTAAAATGATGT+TGG - chr6.3:69913434-69913453 None:intergenic 20.0%
!! AAATGCAATTGAATCATAAA+AGG - chr6.3:69917686-69917705 None:intergenic 20.0%
!! AATGCAATTGAATCATAAAA+GGG - chr6.3:69917685-69917704 None:intergenic 20.0%
!! AATTGTTATGAGTTCAATAT+TGG - chr6.3:69918020-69918039 None:intergenic 20.0%
!! AATTTGTATAATTACAACTG+AGG - chr6.3:69915226-69915245 None:intergenic 20.0%
!! ATTCTATCAATAGATGTTTA+AGG - chr6.3:69913619-69913638 None:intergenic 20.0%
!! ATTTCAACATTTGAAAATCA+TGG + chr6.3:69915751-69915770 MS.gene041688:intron 20.0%
!! ATTTGTATAATTACAACTGA+GGG - chr6.3:69915225-69915244 None:intergenic 20.0%
!! GTATATTTGAACAAAAATTG+TGG + chr6.3:69915662-69915681 MS.gene041688:intron 20.0%
!! TAAACAGAAGTTAATTTAGA+AGG - chr6.3:69916427-69916446 None:intergenic 20.0%
!! TAATTCAGTAAATGAATGTT+GGG + chr6.3:69914895-69914914 MS.gene041688:intron 20.0%
!! TAGAAACATTTACATTCAAA+TGG - chr6.3:69913648-69913667 None:intergenic 20.0%
!! TAGAGTAAGAAGAAAAATAA+CGG - chr6.3:69913364-69913383 None:intergenic 20.0%
!! TATTAACAAATTTGAAGAGA+TGG - chr6.3:69916799-69916818 None:intergenic 20.0%
!! TGAAGATAAACAATGTAAAT+TGG + chr6.3:69915360-69915379 MS.gene041688:intron 20.0%
!! TTAATTCAGTAAATGAATGT+TGG + chr6.3:69914894-69914913 MS.gene041688:intron 20.0%
!! TTGAATAAACAACTTGATTA+GGG - chr6.3:69914767-69914786 None:intergenic 20.0%
!! TTTAATGCTTCTGATTAATA+AGG + chr6.3:69914540-69914559 MS.gene041688:intron 20.0%
!! TTTATGATTCAATTGCATTT+CGG + chr6.3:69917686-69917705 MS.gene041688:intron 20.0%
!! TTTGAATAAACAACTTGATT+AGG - chr6.3:69914768-69914787 None:intergenic 20.0%
!!! AAAATAATTTGGATTTTGGA+TGG + chr6.3:69915708-69915727 MS.gene041688:intron 20.0%
!!! AAAATGGTATAAATGTGTTT+TGG - chr6.3:69915938-69915957 None:intergenic 20.0%
!!! ACCATTATATTATTCTGAAA+AGG - chr6.3:69912703-69912722 None:intergenic 20.0%
!!! ATAAAAATGAACACTTGTTA+AGG + chr6.3:69912782-69912801 MS.gene041688:CDS 20.0%
!!! GATTTTGAACAAATCTTTTT+TGG + chr6.3:69916360-69916379 MS.gene041688:intron 20.0%
!!! TAATTAACAGCTATTTTCTT+GGG - chr6.3:69913891-69913910 None:intergenic 20.0%
!!! TCCTTTTCAGAATAATATAA+TGG + chr6.3:69912699-69912718 MS.gene041688:CDS 20.0%
!!! TGGTTTTGATAATAGATATT+AGG - chr6.3:69918083-69918102 None:intergenic 20.0%
!!! TTAAGTCGATTTTATTTATC+TGG + chr6.3:69916854-69916873 MS.gene041688:intron 20.0%
!!! TTGAATGCTTTAAATAAGAA+TGG + chr6.3:69914852-69914871 MS.gene041688:intron 20.0%
!!! TTGAATGTAAATGTTTCTAA+TGG + chr6.3:69913649-69913668 MS.gene041688:intron 20.0%
!!! TTTTCAGAATAATATAATGG+TGG + chr6.3:69912702-69912721 MS.gene041688:CDS 20.0%
! AAATATACATCTGAAAATCG+TGG - chr6.3:69915650-69915669 None:intergenic 25.0%
! AAATTATTATGTCAGAGACA+TGG - chr6.3:69918103-69918122 None:intergenic 25.0%
! ACTTATTATGGTACAAATGA+TGG + chr6.3:69916648-69916667 MS.gene041688:intron 25.0%
! AGAATGTGTTTATAAGTGAT+GGG - chr6.3:69917772-69917791 None:intergenic 25.0%
! ATGTCTCTGACATAATAATT+TGG + chr6.3:69918102-69918121 MS.gene041688:intron 25.0%
! ATTTATAATGAAATTTGCCC+AGG - chr6.3:69914314-69914333 None:intergenic 25.0%
! GATGGTTAATGAATTTAACA+AGG - chr6.3:69915832-69915851 None:intergenic 25.0%
! TAAACTGCAAAAAAGGAAAT+TGG - chr6.3:69913809-69913828 None:intergenic 25.0%
! TAATGTAAAATGATGTTGGA+AGG - chr6.3:69913430-69913449 None:intergenic 25.0%
! TATGACAATATGTATTCAAG+TGG - chr6.3:69917986-69918005 None:intergenic 25.0%
! TGAAGAATTCAAACAATCAT+TGG - chr6.3:69915074-69915093 None:intergenic 25.0%
! TGCAACATATTATCATACTA+TGG - chr6.3:69914796-69914815 None:intergenic 25.0%
! TGCATATGAAAATTAAAACG+AGG - chr6.3:69915909-69915928 None:intergenic 25.0%
! TTAACGATATGTATTTGACA+TGG + chr6.3:69914058-69914077 MS.gene041688:intron 25.0%
! TTTAAGCTGTTTATCTTCAT+TGG - chr6.3:69915302-69915321 None:intergenic 25.0%
!! ATCAAGTTGTTTATTCAAAC+AGG + chr6.3:69914769-69914788 MS.gene041688:intron 25.0%
!! ATTTTTCTTCTTACTCTATG+TGG + chr6.3:69913366-69913385 MS.gene041688:CDS 25.0%
!! TCAAGTTGTTTATTCAAACA+GGG + chr6.3:69914770-69914789 MS.gene041688:intron 25.0%
!! TTTTCTCATTCAACTCTTTA+AGG - chr6.3:69916940-69916959 None:intergenic 25.0%
!!! AATTTCCTTTTTTGCAGTTT+AGG + chr6.3:69913808-69913827 MS.gene041688:intron 25.0%
!!! ACCTTATCTCTTTTTTAAGT+GGG + chr6.3:69917795-69917814 MS.gene041688:intron 25.0%
!!! AGCTTTACTTTTGTTTTCAA+TGG + chr6.3:69913065-69913084 MS.gene041688:intron 25.0%
!!! GTAATTAACAGCTATTTTCT+TGG - chr6.3:69913892-69913911 None:intergenic 25.0%
!!! TAATCTTGTAGTCTTTTTCA+CGG - chr6.3:69914102-69914121 None:intergenic 25.0%
!!! TGTTTGATAATCATTTTGTG+CGG - chr6.3:69918236-69918255 None:intergenic 25.0%
AAACAAGGTTTAGAAGTAAG+AGG + chr6.3:69915455-69915474 MS.gene041688:intron 30.0%
AAACATACAGAACTTTCTTC+AGG + chr6.3:69916232-69916251 MS.gene041688:CDS 30.0%
AAAGATCACATGCGTATAAT+TGG - chr6.3:69916095-69916114 None:intergenic 30.0%
AACGACACAACATAACAAAA+GGG + chr6.3:69915332-69915351 MS.gene041688:intron 30.0%
AACGAGGAAAACAATATGAT+TGG - chr6.3:69915893-69915912 None:intergenic 30.0%
ACAATATGTATTCAAGTGGT+GGG - chr6.3:69917982-69918001 None:intergenic 30.0%
ACCTTAGGATCAAATATAGT+GGG - chr6.3:69912895-69912914 None:intergenic 30.0%
ATACAGACGACATACATTAA+AGG + chr6.3:69917162-69917181 MS.gene041688:CDS 30.0%
ATCTGGGAATATATTGGATA+AGG - chr6.3:69914231-69914250 None:intergenic 30.0%
ATGTATGTAATTACGTTCAG+TGG - chr6.3:69915854-69915873 None:intergenic 30.0%
ATTGTCATTATAACGATGCA+TGG + chr6.3:69915032-69915051 MS.gene041688:CDS 30.0%
CGTTAATTGTATTATGTGCA+TGG - chr6.3:69915607-69915626 None:intergenic 30.0%
CTGATTAATAAGGTTACATC+AGG + chr6.3:69914550-69914569 MS.gene041688:intron 30.0%
GAGAATGTGTTTATAAGTGA+TGG - chr6.3:69917773-69917792 None:intergenic 30.0%
GATGTTTAAGGAAAATTACC+TGG - chr6.3:69913607-69913626 None:intergenic 30.0%
GATTGTTTGAATTCTTCATC+TGG + chr6.3:69915076-69915095 MS.gene041688:CDS 30.0%
GCACAACTATATGACAAAAA+AGG - chr6.3:69913111-69913130 None:intergenic 30.0%
GCATGTAAATAGCATACTTA+TGG - chr6.3:69918061-69918080 None:intergenic 30.0%
GGGAAAAAAATAAAGCTTCA+CGG + chr6.3:69917455-69917474 MS.gene041688:CDS 30.0%
GTATTTGACATGGAAGAAAA+GGG + chr6.3:69914068-69914087 MS.gene041688:intron 30.0%
GTGTTCTTAACCTTATAAGA+CGG - chr6.3:69917750-69917769 None:intergenic 30.0%
GTTCTTTGTATTTGAATGCA+AGG - chr6.3:69914473-69914492 None:intergenic 30.0%
GTTGTCTAATATCATGTCAA+GGG + chr6.3:69916020-69916039 MS.gene041688:intron 30.0%
TAAATTGCAAAATGCATACC+TGG - chr6.3:69915195-69915214 None:intergenic 30.0%
TAACGACACAACATAACAAA+AGG + chr6.3:69915331-69915350 MS.gene041688:intron 30.0%
TAACTCAACCATTAAAACAC+TGG + chr6.3:69917931-69917950 MS.gene041688:intron 30.0%
TAACTTGAATCAACCCTAAA+AGG + chr6.3:69916044-69916063 MS.gene041688:intron 30.0%
TACCTTAGGATCAAATATAG+TGG - chr6.3:69912896-69912915 None:intergenic 30.0%
TAGTAGTTAATAAGGTTGAG+TGG + chr6.3:69915790-69915809 MS.gene041688:intron 30.0%
TATTCGCAGCTCAATATTAT+AGG - chr6.3:69915253-69915272 None:intergenic 30.0%
TCAAATAAGTCTAACCAAAC+AGG - chr6.3:69914576-69914595 None:intergenic 30.0%
TCATAAGTCATAACCAGTTA+TGG + chr6.3:69915419-69915438 MS.gene041688:intron 30.0%
TCCCACTTAAAAAAGAGATA+AGG - chr6.3:69917799-69917818 None:intergenic 30.0%
TGAACAATCTGGGAATATAT+TGG - chr6.3:69914237-69914256 None:intergenic 30.0%
TGATGATCTAACATTTCTAC+AGG + chr6.3:69917077-69917096 MS.gene041688:intron 30.0%
TGCAGAAAACGAATAAGAAA+AGG - chr6.3:69913488-69913507 None:intergenic 30.0%
TGTATTTGACATGGAAGAAA+AGG + chr6.3:69914067-69914086 MS.gene041688:intron 30.0%
TGTGTCTTGAATCTTAAACA+TGG + chr6.3:69913725-69913744 MS.gene041688:intron 30.0%
TGTTGTCTAATATCATGTCA+AGG + chr6.3:69916019-69916038 MS.gene041688:intron 30.0%
TTATAAAAAAGGGGAAGACA+AGG + chr6.3:69915969-69915988 MS.gene041688:intron 30.0%
TTTAACACAGTTCAAGTACA+TGG + chr6.3:69915526-69915545 MS.gene041688:intron 30.0%
TTTAGGAAGAAAGATACCTT+AGG - chr6.3:69912910-69912929 None:intergenic 30.0%
TTTCTTCCTATAAGCAAAGA+GGG - chr6.3:69913698-69913717 None:intergenic 30.0%
! AAACCATTCATTTGCCTTTT+AGG - chr6.3:69916061-69916080 None:intergenic 30.0%
! AACCATTCATTTGCCTTTTA+GGG - chr6.3:69916060-69916079 None:intergenic 30.0%
! AAGTTTTCTTCCATAACCTT+TGG - chr6.3:69913230-69913249 None:intergenic 30.0%
! AATATGTGTATGCACTCTTT+TGG + chr6.3:69915164-69915183 MS.gene041688:CDS 30.0%
! ACCATCTTAGAATTTGAGTT+AGG + chr6.3:69917906-69917925 MS.gene041688:intron 30.0%
! ATATGTGTATGCACTCTTTT+GGG + chr6.3:69915165-69915184 MS.gene041688:CDS 30.0%
! CATTTTTATTACTCACCTGT+AGG - chr6.3:69914393-69914412 None:intergenic 30.0%
! CTTCTGATTTTTATGCTATC+CGG + chr6.3:69914334-69914353 MS.gene041688:CDS 30.0%
! GAAAACTAGTTTCAAGACAA+AGG + chr6.3:69916955-69916974 MS.gene041688:intron 30.0%
! GAGAAGTTTTCTACATTTGA+TGG + chr6.3:69912754-69912773 MS.gene041688:CDS 30.0%
! GGTTAAATACGTTTTGTAGA+TGG + chr6.3:69915547-69915566 MS.gene041688:intron 30.0%
! TTTATTTCTCTTCTTCCAGA+GGG + chr6.3:69914946-69914965 MS.gene041688:intron 30.0%
! TTTTCTTCCTATAAGCAAAG+AGG - chr6.3:69913699-69913718 None:intergenic 30.0%
!! CTCAAATTCTAAGATGGTAT+CGG - chr6.3:69917904-69917923 None:intergenic 30.0%
!! TTTTATTTCTCTTCTTCCAG+AGG + chr6.3:69914945-69914964 MS.gene041688:intron 30.0%
!!! AGTGTTTTAATGGTTGAGTT+AGG - chr6.3:69917932-69917951 None:intergenic 30.0%
!!! GACCTTATCTCTTTTTTAAG+TGG + chr6.3:69917794-69917813 MS.gene041688:intron 30.0%
!!! GGTGTTATTTTGACACAAAA+TGG + chr6.3:69915476-69915495 MS.gene041688:intron 30.0%
!!! TCATACCTTTTAAGTTCTTC+TGG - chr6.3:69916563-69916582 None:intergenic 30.0%
!!! TTTTTTCTTTCTGCTCTTCA+TGG + chr6.3:69913248-69913267 MS.gene041688:CDS 30.0%
AACAAACAACATGGAGAGAT+AGG - chr6.3:69913977-69913996 None:intergenic 35.0%
AACCCTAAAAGGCAAATGAA+TGG + chr6.3:69916055-69916074 MS.gene041688:intron 35.0%
AAGATATATACCTGAGGAAG+AGG - chr6.3:69913954-69913973 None:intergenic 35.0%
AAGCTGTTTATCTTCATTGG+AGG - chr6.3:69915299-69915318 None:intergenic 35.0%
AATACAGCAAATCAGTACTC+TGG + chr6.3:69916115-69916134 MS.gene041688:intron 35.0%
AATAGGCTCAAAACAACTGA+TGG - chr6.3:69914658-69914677 None:intergenic 35.0%
AATTGCGACCAAGCAAAATA+TGG - chr6.3:69913332-69913351 None:intergenic 35.0%
ACAATGTCCATCATAGGATT+GGG + chr6.3:69916182-69916201 MS.gene041688:CDS 35.0%
ACCACTTACGATAGAAACTA+GGG + chr6.3:69915132-69915151 MS.gene041688:CDS 35.0%
ACGACACAACATAACAAAAG+GGG + chr6.3:69915333-69915352 MS.gene041688:intron 35.0%
AGGAAGTAAAATTCTCAGTC+AGG + chr6.3:69917182-69917201 MS.gene041688:CDS 35.0%
AGGCAAAAATCTGAACAATC+TGG - chr6.3:69914248-69914267 None:intergenic 35.0%
AGTAAGATGCTTAACCAATG+TGG + chr6.3:69917502-69917521 MS.gene041688:CDS 35.0%
AGTTAATAAGGTTGAGTGGA+TGG + chr6.3:69915794-69915813 MS.gene041688:intron 35.0%
AGTTGTACAACAATGGAACA+AGG + chr6.3:69913300-69913319 MS.gene041688:CDS 35.0%
ATGCAGTTAGATTAGTACGA+TGG - chr6.3:69914997-69915016 None:intergenic 35.0%
ATGTAATTACGTTCAGTGGA+TGG - chr6.3:69915850-69915869 None:intergenic 35.0%
ATTTATCCTACCAAGTTCCT+TGG + chr6.3:69914159-69914178 MS.gene041688:CDS 35.0%
CAAACCATGTTTAATCGATG+TGG + chr6.3:69917418-69917437 MS.gene041688:intron 35.0%
CAGAATAATATAATGGTGGC+AGG + chr6.3:69912706-69912725 MS.gene041688:CDS 35.0%
CAGTTCCACAATTCTCTTTA+CGG + chr6.3:69913199-69913218 MS.gene041688:intron 35.0%
CATTCATTATGTGAAGATGC+GGG - chr6.3:69914495-69914514 None:intergenic 35.0%
CCATTCATTATGTGAAGATG+CGG - chr6.3:69914496-69914515 None:intergenic 35.0%
CTCTTTACAATGTCCATCAT+AGG + chr6.3:69916176-69916195 MS.gene041688:CDS 35.0%
CTTCTTCAATGTCTTTAGCA+CGG - chr6.3:69917541-69917560 None:intergenic 35.0%
GACAATATGTATTCAAGTGG+TGG - chr6.3:69917983-69918002 None:intergenic 35.0%
GATAGGAAGATATATACCTG+AGG - chr6.3:69913960-69913979 None:intergenic 35.0%
GCAGCGTTATAAATTCCATA+AGG - chr6.3:69915109-69915128 None:intergenic 35.0%
GCTTACCAGAAGAACTTAAA+AGG + chr6.3:69916555-69916574 MS.gene041688:CDS 35.0%
GGAAGTAAAATTCTCAGTCA+GGG + chr6.3:69917183-69917202 MS.gene041688:CDS 35.0%
GGCAAAAATCTGAACAATCT+GGG - chr6.3:69914247-69914266 None:intergenic 35.0%
GGCGCATGAATATAAATGAT+GGG + chr6.3:69917857-69917876 MS.gene041688:intron 35.0%
GTTGCAGGAGAAACATATAA+TGG - chr6.3:69912673-69912692 None:intergenic 35.0%
GTTTATTGTGCGTGGAAAAT+TGG + chr6.3:69917227-69917246 MS.gene041688:CDS 35.0%
TACAATGTCCATCATAGGAT+TGG + chr6.3:69916181-69916200 MS.gene041688:CDS 35.0%
TACCACTTACGATAGAAACT+AGG + chr6.3:69915131-69915150 MS.gene041688:CDS 35.0%
TATTGACACAAAGACAGAAG+GGG - chr6.3:69917646-69917665 None:intergenic 35.0%
TCCCACTATATTTGATCCTA+AGG + chr6.3:69912891-69912910 MS.gene041688:CDS 35.0%
TGCTTCAATTTCCATTCCTA+TGG + chr6.3:69912552-69912571 MS.gene041688:CDS 35.0%
TGGTTAAGCATCTTACTGTT+CGG - chr6.3:69917499-69917518 None:intergenic 35.0%
TTATAACTCCTTGAACACGA+GGG - chr6.3:69917595-69917614 None:intergenic 35.0%
TTATATGTTTCTCCTGCAAC+TGG + chr6.3:69912673-69912692 MS.gene041688:CDS 35.0%
TTATGTTTCTCCTGAGTCAA+GGG + chr6.3:69913836-69913855 MS.gene041688:CDS 35.0%
TTTATCCTACCAAGTTCCTT+GGG + chr6.3:69914160-69914179 MS.gene041688:CDS 35.0%
! AAGAGAATGACTTGTGTGTT+TGG - chr6.3:69916403-69916422 None:intergenic 35.0%
! AATGAACACTTGTTAAGGTC+TGG + chr6.3:69912787-69912806 MS.gene041688:CDS 35.0%
! AGATTTTTGCCTCTGCTAAT+TGG + chr6.3:69914256-69914275 MS.gene041688:CDS 35.0%
! CATCGATTAAACATGGTTTG+AGG - chr6.3:69917418-69917437 None:intergenic 35.0%
! CTCTTTTCGCAAGATATTTG+CGG + chr6.3:69917567-69917586 MS.gene041688:CDS 35.0%
! GAAACCACATCGATTAAACA+TGG - chr6.3:69917425-69917444 None:intergenic 35.0%
! GATGGTTAGTGGATATAACA+AGG + chr6.3:69915565-69915584 MS.gene041688:intron 35.0%
! GATTGTGACAACTTCTTTTG+AGG - chr6.3:69917386-69917405 None:intergenic 35.0%
! GCATGAATATAAATGATGGG+TGG + chr6.3:69917860-69917879 MS.gene041688:intron 35.0%
! GCCTAACTCAAATTCTAAGA+TGG - chr6.3:69917910-69917929 None:intergenic 35.0%
! GTATTGACACAAAGACAGAA+GGG - chr6.3:69917647-69917666 None:intergenic 35.0%
! TACGTTTTGTAGATGGTTAG+TGG + chr6.3:69915554-69915573 MS.gene041688:intron 35.0%
! TATGTGTATGCACTCTTTTG+GGG + chr6.3:69915166-69915185 MS.gene041688:CDS 35.0%
! TGGATTTTGGATGGTTATAG+TGG + chr6.3:69915717-69915736 MS.gene041688:intron 35.0%
! TTTTGCAGCAAACAGAATTC+AGG + chr6.3:69918168-69918187 MS.gene041688:CDS 35.0%
! TTTTGTTCCATCCTACTTAC+AGG + chr6.3:69916477-69916496 MS.gene041688:intron 35.0%
!! AACAACCAAGCTATTTTGTG+TGG + chr6.3:69916147-69916166 MS.gene041688:CDS 35.0%
!! ACAACCAAGCTATTTTGTGT+GGG + chr6.3:69916148-69916167 MS.gene041688:CDS 35.0%
!! AGTATTGACACAAAGACAGA+AGG - chr6.3:69917648-69917667 None:intergenic 35.0%
!! CATATAATGGACCACTCATT+TGG - chr6.3:69912660-69912679 None:intergenic 35.0%
!! CATTAAAACACTGGCTTGAT+AGG + chr6.3:69917940-69917959 MS.gene041688:intron 35.0%
!! CTATCAAGCCAGTGTTTTAA+TGG - chr6.3:69917942-69917961 None:intergenic 35.0%
!! GAGCAACTTTGAAGTAAGTA+GGG - chr6.3:69912852-69912871 None:intergenic 35.0%
!! GGTTTTAGCCATATTTTGCT+TGG + chr6.3:69913321-69913340 MS.gene041688:CDS 35.0%
!! GTTTTCTACATTTGATGGCA+CGG + chr6.3:69912759-69912778 MS.gene041688:CDS 35.0%
!! TAACAGCTATTTTCTTGGGA+TGG - chr6.3:69913887-69913906 None:intergenic 35.0%
!! TATTGACTTGTGAGACTGTT+TGG + chr6.3:69914603-69914622 MS.gene041688:intron 35.0%
!! TGAGCAACTTTGAAGTAAGT+AGG - chr6.3:69912853-69912872 None:intergenic 35.0%
!! TGGTTGTTTTGTCTTATGCT+AGG + chr6.3:69918122-69918141 MS.gene041688:intron 35.0%
!!! AATTTTTTCCCATATGGCTG+AGG + chr6.3:69917104-69917123 MS.gene041688:CDS 35.0%
!!! GGTTCGAATTTTTTCCCATA+TGG + chr6.3:69917098-69917117 MS.gene041688:intron 35.0%
!!! TCTCTTTTTTAAGTGGGACT+TGG + chr6.3:69917801-69917820 MS.gene041688:intron 35.0%
AAAAATAAAGCTTCACGGCC+AGG + chr6.3:69917460-69917479 MS.gene041688:CDS 40.0%
AAAATAAAGCTTCACGGCCA+GGG + chr6.3:69917461-69917480 MS.gene041688:CDS 40.0%
AACCAGTTATGGTTGACGAT+AGG + chr6.3:69915430-69915449 MS.gene041688:intron 40.0%
AAGATGCTTAACCAATGTGG+AGG + chr6.3:69917505-69917524 MS.gene041688:CDS 40.0%
AAGATGGTGTTTATTGTGCG+TGG + chr6.3:69917219-69917238 MS.gene041688:CDS 40.0%
ACAATAGATTCGGGCGTATT+AGG - chr6.3:69917833-69917852 None:intergenic 40.0%
ACCCTAGTTTCTATCGTAAG+TGG - chr6.3:69915136-69915155 None:intergenic 40.0%
ACGCGAAAGTTGTACAACAA+TGG + chr6.3:69913293-69913312 MS.gene041688:CDS 40.0%
ACTTACGATAGAAACTAGGG+TGG + chr6.3:69915135-69915154 MS.gene041688:CDS 40.0%
ACTTCCCACACAAAATAGCT+TGG - chr6.3:69916155-69916174 None:intergenic 40.0%
ACTTGTGAGACTGTTTGGAA+CGG + chr6.3:69914608-69914627 MS.gene041688:intron 40.0%
AGAGGGTTAACCAATGTTTG+CGG + chr6.3:69914963-69914982 MS.gene041688:intron 40.0%
AGGGTAGAAATGCAACTTAG+AGG + chr6.3:69916500-69916519 MS.gene041688:CDS 40.0%
AGTAAAATTCTCAGTCAGGG+TGG + chr6.3:69917186-69917205 MS.gene041688:CDS 40.0%
AGTTAGATTAGTACGATGGC+AGG - chr6.3:69914993-69915012 None:intergenic 40.0%
ATGTGGTTTCTCTTGCAGAA+GGG + chr6.3:69917435-69917454 MS.gene041688:intron 40.0%
ATTCATATTCGAGTCAGCCT+GGG + chr6.3:69914294-69914313 MS.gene041688:CDS 40.0%
ATTTCTACCCTCCTGTAAGT+AGG - chr6.3:69916491-69916510 None:intergenic 40.0%
CCGCATCTTCACATAATGAA+TGG + chr6.3:69914493-69914512 MS.gene041688:intron 40.0%
CCTCGAAATGTTTCTTCTGA+AGG - chr6.3:69912524-69912543 None:intergenic 40.0%
CCTTCAGAAGAAACATTTCG+AGG + chr6.3:69912521-69912540 MS.gene041688:CDS 40.0%
CGGCGCATGAATATAAATGA+TGG + chr6.3:69917856-69917875 MS.gene041688:intron 40.0%
CTAGGTATGAATCACCTTAC+TGG + chr6.3:69918140-69918159 MS.gene041688:intron 40.0%
CTATAAGCAAAGAGGGACTA+AGG - chr6.3:69913691-69913710 None:intergenic 40.0%
CTCGTGTTCAAGGAGTTATA+AGG + chr6.3:69917594-69917613 MS.gene041688:CDS 40.0%
CTTAGTCCCTCTTTGCTTAT+AGG + chr6.3:69913689-69913708 MS.gene041688:intron 40.0%
CTTATAACTCCTTGAACACG+AGG - chr6.3:69917596-69917615 None:intergenic 40.0%
CTTATGTTTCTCCTGAGTCA+AGG + chr6.3:69913835-69913854 MS.gene041688:CDS 40.0%
CTTCTTACTCTATGTGGAGA+AGG + chr6.3:69913372-69913391 MS.gene041688:CDS 40.0%
GAAGAAACATTTCGAGGACA+CGG + chr6.3:69912527-69912546 MS.gene041688:CDS 40.0%
GATGGGTGGTTCAAATCAAT+AGG + chr6.3:69917874-69917893 MS.gene041688:intron 40.0%
GCTGTTTGCATAAGCTATCA+TGG - chr6.3:69914693-69914712 None:intergenic 40.0%
GGATACTATATCTGTCATGC+AGG + chr6.3:69916669-69916688 MS.gene041688:intron 40.0%
GGCTGTCGAATATTATGTCT+AGG + chr6.3:69913746-69913765 MS.gene041688:intron 40.0%
GGTTGACGATAGGAAAAACA+AGG + chr6.3:69915440-69915459 MS.gene041688:intron 40.0%
GTAGGGCAAGTAGTACAATA+AGG - chr6.3:69912835-69912854 None:intergenic 40.0%
TATTCGAATCAACCACGCAA+TGG + chr6.3:69913520-69913539 MS.gene041688:CDS 40.0%
TCCTAGACGTAGAAGATTCT+TGG - chr6.3:69914206-69914225 None:intergenic 40.0%
TCTCTTGAACATTCTTCTCC+AGG + chr6.3:69913586-69913605 MS.gene041688:CDS 40.0%
TGAAAAGGATTTCCAGTTGC+AGG - chr6.3:69912688-69912707 None:intergenic 40.0%
TTATAACGATGCATGGATCC+AGG + chr6.3:69915039-69915058 MS.gene041688:CDS 40.0%
TTATCCTACCAAGTTCCTTG+GGG + chr6.3:69914161-69914180 MS.gene041688:CDS 40.0%
TTCCTATCGTCAACCATAAC+TGG - chr6.3:69915435-69915454 None:intergenic 40.0%
TTGTTAAGGTCTGGACAACT+AGG + chr6.3:69912796-69912815 MS.gene041688:CDS 40.0%
! AACGGTGTCAACAAACAACA+TGG - chr6.3:69913986-69914005 None:intergenic 40.0%
! CTGTATTAGTCTCTCACGAA+TGG - chr6.3:69917148-69917167 None:intergenic 40.0%
! CTTCTGAAGGTAGAATCTTG+AGG - chr6.3:69912511-69912530 None:intergenic 40.0%
! GAACAGTCTTCTGAAAGCAA+AGG + chr6.3:69917330-69917349 MS.gene041688:CDS 40.0%
! GACTTGTGTGTTTGGTTTCA+CGG - chr6.3:69916395-69916414 None:intergenic 40.0%
! GTGGTGAAGAACTTCTAAGA+TGG + chr6.3:69917301-69917320 MS.gene041688:CDS 40.0%
! TCAAATATAGTGGGAGCTCT+TGG - chr6.3:69912886-69912905 None:intergenic 40.0%
! TCATCTGGTGCTTTTCCTTA+TGG + chr6.3:69915091-69915110 MS.gene041688:CDS 40.0%
!! AAAACACTGGCTTGATAGGT+GGG + chr6.3:69917944-69917963 MS.gene041688:intron 40.0%
!! CAAACAGAATTCAGGTTGCA+TGG + chr6.3:69918176-69918195 MS.gene041688:CDS 40.0%
!! CTCTCGTGCAAAAGTTGATA+TGG + chr6.3:69915391-69915410 MS.gene041688:intron 40.0%
!! TAAAACACTGGCTTGATAGG+TGG + chr6.3:69917943-69917962 MS.gene041688:intron 40.0%
!! TGCATTTCGGTGTTGTGTTT+GGG + chr6.3:69917699-69917718 MS.gene041688:intron 40.0%
!! TGGATATAACAAGGTGTTGC+AGG + chr6.3:69915574-69915593 MS.gene041688:intron 40.0%
!! TTGCATTTCGGTGTTGTGTT+TGG + chr6.3:69917698-69917717 MS.gene041688:intron 40.0%
!!! TCCTTTTTTGCAGTTTAGGC+TGG + chr6.3:69913812-69913831 MS.gene041688:intron 40.0%
!!! TTGCTTTTTGCGCTTCTCAT+TGG + chr6.3:69916209-69916228 MS.gene041688:CDS 40.0%
AAGCTATCATGGAGAGCTCA+TGG - chr6.3:69914682-69914701 None:intergenic 45.0%
AAGGTTACATCAGGCCTGTT+TGG + chr6.3:69914559-69914578 MS.gene041688:intron 45.0%
ACACAAAGACAGAAGGGGAA+TGG - chr6.3:69917641-69917660 None:intergenic 45.0%
ACCAGCATGAACCAACAACA+TGG - chr6.3:69914360-69914379 None:intergenic 45.0%
ACCTTATAAGACGGCTCTGT+AGG - chr6.3:69917741-69917760 None:intergenic 45.0%
ACGCCCGAATCTATTGTACT+CGG + chr6.3:69917836-69917855 MS.gene041688:intron 45.0%
ACTCCTGTTAGCCAAATGAG+TGG + chr6.3:69912646-69912665 MS.gene041688:CDS 45.0%
ACTTTCTTCAGGCTCTTGGA+CGG + chr6.3:69916243-69916262 MS.gene041688:CDS 45.0%
ATCCAGAGAAGCCATAGGAA+TGG - chr6.3:69912566-69912585 None:intergenic 45.0%
ATGGTGGCAGGAAACAAAGT+AGG + chr6.3:69912718-69912737 MS.gene041688:CDS 45.0%
ATGTCTGTCTGGAGATCTTC+TGG - chr6.3:69916770-69916789 None:intergenic 45.0%
ATTCCGGTTCCGTTATCAGA+AGG + chr6.3:69917270-69917289 MS.gene041688:CDS 45.0%
CAAGAGTCCCAATCCTATGA+TGG - chr6.3:69916192-69916211 None:intergenic 45.0%
CAAGCATCCCCTTCTGATAA+CGG - chr6.3:69917282-69917301 None:intergenic 45.0%
CACAAAGACAGAAGGGGAAT+GGG - chr6.3:69917640-69917659 None:intergenic 45.0%
CAGAACTTTCTTCAGGCTCT+TGG + chr6.3:69916239-69916258 MS.gene041688:CDS 45.0%
CATGGAGAGCTCATGGAAAT+AGG - chr6.3:69914675-69914694 None:intergenic 45.0%
CCAGTATGTCCGACAAGATT+CGG - chr6.3:69912604-69912623 None:intergenic 45.0%
CCTTATAAGACGGCTCTGTA+GGG - chr6.3:69917740-69917759 None:intergenic 45.0%
CTAATTGGTCAGTCTCCAAC+CGG + chr6.3:69914271-69914290 MS.gene041688:CDS 45.0%
GACTCGAATATGAATCCGGT+TGG - chr6.3:69914289-69914308 None:intergenic 45.0%
GAGAGACAACCGAATCTTGT+CGG + chr6.3:69912592-69912611 MS.gene041688:CDS 45.0%
GAGGGTTAACCAATGTTTGC+GGG + chr6.3:69914964-69914983 MS.gene041688:intron 45.0%
GAGTGAAAATGCCTCCACAT+TGG - chr6.3:69917519-69917538 None:intergenic 45.0%
GATGTGGTTTCTCTTGCAGA+AGG + chr6.3:69917434-69917453 MS.gene041688:intron 45.0%
GATTCATATTCGAGTCAGCC+TGG + chr6.3:69914293-69914312 MS.gene041688:CDS 45.0%
GCCAAGAATCTTCTACGTCT+AGG + chr6.3:69914202-69914221 MS.gene041688:CDS 45.0%
GCCAGCCTAAACTGCAAAAA+AGG - chr6.3:69913816-69913835 None:intergenic 45.0%
GCTGCAAAAGATCTCCAGTA+AGG - chr6.3:69918157-69918176 None:intergenic 45.0%
GTTCCATCCTACTTACAGGA+GGG + chr6.3:69916481-69916500 MS.gene041688:intron 45.0%
TATGGATCCAGAGAAGCCAT+AGG - chr6.3:69912571-69912590 None:intergenic 45.0%
TGCGCCGAGTACAATAGATT+CGG - chr6.3:69917843-69917862 None:intergenic 45.0%
TGGTGGCAGGAAACAAAGTA+GGG + chr6.3:69912719-69912738 MS.gene041688:CDS 45.0%
TGTTCCATCCTACTTACAGG+AGG + chr6.3:69916480-69916499 MS.gene041688:intron 45.0%
TGTTGTACAACTTTCGCGTG+AGG - chr6.3:69913292-69913311 None:intergenic 45.0%
TGTTGTATCACCTCTTCCTC+AGG + chr6.3:69913941-69913960 MS.gene041688:CDS 45.0%
TTATCAGAAGGGGATGCTTG+TGG + chr6.3:69917282-69917301 MS.gene041688:CDS 45.0%
TTCCATTCCTATGGCTTCTC+TGG + chr6.3:69912561-69912580 MS.gene041688:CDS 45.0%
TTCCGGTTCCGTTATCAGAA+GGG + chr6.3:69917271-69917290 MS.gene041688:CDS 45.0%
TTCTGCTCTTCATGGATTCC+TGG + chr6.3:69913256-69913275 MS.gene041688:CDS 45.0%
! AGACTGTTTGGAACGGCTTA+CGG + chr6.3:69914615-69914634 MS.gene041688:intron 45.0%
! AGATTCGGTTGTCTCTCGTA+TGG - chr6.3:69912589-69912608 None:intergenic 45.0%
! CACGAATGGCGTCTAAGATA+GGG - chr6.3:69917134-69917153 None:intergenic 45.0%
! CCACGTGTTTCTGACAGAAT+CGG - chr6.3:69912472-69912491 None:intergenic 45.0%
! GCAAACATTGGTTAACCCTC+TGG - chr6.3:69914964-69914983 None:intergenic 45.0%
! GTTTGTTGACACCGTTACCT+CGG + chr6.3:69913990-69914009 MS.gene041688:intron 45.0%
! TCACGAATGGCGTCTAAGAT+AGG - chr6.3:69917135-69917154 None:intergenic 45.0%
! TGTGTGTTTGGTTTCACGGT+AGG - chr6.3:69916391-69916410 None:intergenic 45.0%
!! GGCTGACTCGAATATGAATC+CGG - chr6.3:69914293-69914312 None:intergenic 45.0%
!! TTCAGGTTGCATGGAGATAC+AGG + chr6.3:69918185-69918204 MS.gene041688:CDS 45.0%
!! TTCGGTGTTGTGTTTGGGTT+GGG + chr6.3:69917704-69917723 MS.gene041688:intron 45.0%
!! TTTCGGTGTTGTGTTTGGGT+TGG + chr6.3:69917703-69917722 MS.gene041688:intron 45.0%
!! AACATTTAATATTATAAAAA+AGG + chr6.3:69915958-69915977 MS.gene041688:intron 5.0%
!! ACATTTAATATTATAAAAAA+GGG + chr6.3:69915959-69915978 MS.gene041688:intron 5.0%
!! TATAATATTAAATGTTAAAA+TGG - chr6.3:69915954-69915973 None:intergenic 5.0%
!!! AATTTTATTTAAAACATTAT+AGG - chr6.3:69916910-69916929 None:intergenic 5.0%
AAGACAGAAGGGGAATGGGA+TGG - chr6.3:69917636-69917655 None:intergenic 50.0%
AATCATTGGAGCCCTGATCC+TGG - chr6.3:69915060-69915079 None:intergenic 50.0%
AGGGTCATCCTCAGCCATAT+GGG - chr6.3:69917115-69917134 None:intergenic 50.0%
ATCTGTCATGCAGGAGAGTG+CGG + chr6.3:69916678-69916697 MS.gene041688:intron 50.0%
ATGACCCCAAGGAACTTGGT+AGG - chr6.3:69914168-69914187 None:intergenic 50.0%
ATGCTATCCGGCCATGTTGT+TGG + chr6.3:69914346-69914365 MS.gene041688:CDS 50.0%
ATTTGCTCCTGATGACCCCA+AGG - chr6.3:69914179-69914198 None:intergenic 50.0%
CAGCAAATCAGTACTCTGGC+TGG + chr6.3:69916119-69916138 MS.gene041688:intron 50.0%
CATCCACAACACCGAGGTAA+CGG - chr6.3:69914004-69914023 None:intergenic 50.0%
CCCTACAGAGCCGTCTTATA+AGG + chr6.3:69917737-69917756 MS.gene041688:intron 50.0%
CCGAATCTTGTCGGACATAC+TGG + chr6.3:69912601-69912620 MS.gene041688:CDS 50.0%
CCGATTCTGTCAGAAACACG+TGG + chr6.3:69912469-69912488 MS.gene041688:CDS 50.0%
CGTCGCCGTAAAGAGAATTG+TGG - chr6.3:69913207-69913226 None:intergenic 50.0%
CTACCCTCCTGTAAGTAGGA+TGG - chr6.3:69916487-69916506 None:intergenic 50.0%
GATGCATGGATCCAGGATCA+GGG + chr6.3:69915046-69915065 MS.gene041688:CDS 50.0%
GATGGCGTCTTATGTCTGTC+TGG - chr6.3:69916781-69916800 None:intergenic 50.0%
GCATGAACCAACAACATGGC+CGG - chr6.3:69914356-69914375 None:intergenic 50.0%
GCGCCGAGTACAATAGATTC+GGG - chr6.3:69917842-69917861 None:intergenic 50.0%
GCGTGAGGATTCATAACTCC+AGG - chr6.3:69913277-69913296 None:intergenic 50.0%
GGACCACTCATTTGGCTAAC+AGG - chr6.3:69912652-69912671 None:intergenic 50.0%
GGAGACTGACCAATTAGCAG+AGG - chr6.3:69914268-69914287 None:intergenic 50.0%
GGTGGCAGGAAACAAAGTAG+GGG + chr6.3:69912720-69912739 MS.gene041688:CDS 50.0%
GGTTCATGCTGGTACCTCTT+TGG + chr6.3:69914367-69914386 MS.gene041688:CDS 50.0%
GTATAGCTGGGCTGCAACAA+GGG + chr6.3:69916712-69916731 MS.gene041688:CDS 50.0%
GTTCTTCTGGTAAGCGACGA+TGG - chr6.3:69916550-69916569 None:intergenic 50.0%
TACTCACCTGTAGGCCAAAG+AGG - chr6.3:69914384-69914403 None:intergenic 50.0%
TAGGGTCATCCTCAGCCATA+TGG - chr6.3:69917116-69917135 None:intergenic 50.0%
TATAGCTGGGCTGCAACAAG+GGG + chr6.3:69916713-69916732 MS.gene041688:CDS 50.0%
TCCGGTTCCGTTATCAGAAG+GGG + chr6.3:69917272-69917291 MS.gene041688:CDS 50.0%
TCTCCTGAGTCAAGGGTTGT+TGG + chr6.3:69913843-69913862 MS.gene041688:CDS 50.0%
! AAAATTGGAGAGCGTGGGAG+AGG + chr6.3:69917242-69917261 MS.gene041688:CDS 50.0%
! AGTCAAGGGTTGTTGGTGCT+GGG + chr6.3:69913850-69913869 MS.gene041688:CDS 50.0%
! CAAGTGTTGTTGCCATTGCG+TGG - chr6.3:69913535-69913554 None:intergenic 50.0%
! CGTGGAAAATTGGAGAGCGT+GGG + chr6.3:69917237-69917256 MS.gene041688:CDS 50.0%
! GCTAACAGGAGTTTTCCTCG+TGG - chr6.3:69912638-69912657 None:intergenic 50.0%
! GTTTTCCTCGTGGTACGAAG+CGG - chr6.3:69912628-69912647 None:intergenic 50.0%
! TTAAGGCATCCACAACACCG+AGG - chr6.3:69914010-69914029 None:intergenic 50.0%
!! GCCATGTTGTTGGTTCATGC+TGG + chr6.3:69914356-69914375 MS.gene041688:CDS 50.0%
!! GGGTGGTCTTGTACAGAAGA+TGG + chr6.3:69917203-69917222 MS.gene041688:CDS 50.0%
!! TCCCCTTCTGATAACGGAAC+CGG - chr6.3:69917276-69917295 None:intergenic 50.0%
!! TGCACTCTTTTGGGGATTCC+AGG + chr6.3:69915174-69915193 MS.gene041688:CDS 50.0%
CCAAGTTCCTTGGGGTCATC+AGG + chr6.3:69914169-69914188 MS.gene041688:CDS 55.0%
CCTGATGACCCCAAGGAACT+TGG - chr6.3:69914172-69914191 None:intergenic 55.0%
CGATGCATGGATCCAGGATC+AGG + chr6.3:69915045-69915064 MS.gene041688:CDS 55.0%
CGTGGGAGAGGATGGAATTC+CGG + chr6.3:69917254-69917273 MS.gene041688:CDS 55.0%
CTGGTACCTCTTTGGCCTAC+AGG + chr6.3:69914375-69914394 MS.gene041688:CDS 55.0%
GAGGTCGTGATGTTGAGCAG+TGG + chr6.3:69916519-69916538 MS.gene041688:CDS 55.0%
GAGTCAAGGGTTGTTGGTGC+TGG + chr6.3:69913849-69913868 MS.gene041688:CDS 55.0%
GCACCAACAACCCTTGACTC+AGG - chr6.3:69913849-69913868 None:intergenic 55.0%
GCAGGCTGAACGGTATAGCT+GGG + chr6.3:69916700-69916719 MS.gene041688:CDS 55.0%
GCGTGGAAAATTGGAGAGCG+TGG + chr6.3:69917236-69917255 MS.gene041688:CDS 55.0%
GGTATAGCTGGGCTGCAACA+AGG + chr6.3:69916711-69916730 MS.gene041688:CDS 55.0%
TACGGCGACGCCAAAGGTTA+TGG + chr6.3:69913217-69913236 MS.gene041688:CDS 55.0%
TCTCTTTACGGCGACGCCAA+AGG + chr6.3:69913211-69913230 MS.gene041688:CDS 55.0%
TTCGGTCGCTAGTCAAACCC+TGG - chr6.3:69917481-69917500 None:intergenic 55.0%
TTCTTCAGGCTCTTGGACGG+AGG + chr6.3:69916246-69916265 MS.gene041688:CDS 55.0%
!! ACACCGTTACCTCGGTGTTG+TGG + chr6.3:69913998-69914017 MS.gene041688:intron 55.0%
!! GTCAAGGGTTGTTGGTGCTG+GGG + chr6.3:69913851-69913870 MS.gene041688:CDS 55.0%
GGCAGGCATCCCGCAAACAT+TGG - chr6.3:69914976-69914995 None:intergenic 60.0%
GGCAGGCTGAACGGTATAGC+TGG + chr6.3:69916699-69916718 MS.gene041688:CDS 60.0%
TCTTGGACGGAGGTAGAGCG+TGG + chr6.3:69916256-69916275 MS.gene041688:intron 60.0%
TTGCGGAGCCCTCGTGTTCA+AGG + chr6.3:69917584-69917603 MS.gene041688:CDS 60.0%
! TTGGAGAGCGTGGGAGAGGA+TGG + chr6.3:69917246-69917265 MS.gene041688:CDS 60.0%
CTGGTCCGCTTCGTACCACG+AGG + chr6.3:69912620-69912639 MS.gene041688:CDS 65.0%
! GGAGAGTGCGGCAGGCTGAA+CGG + chr6.3:69916690-69916709 MS.gene041688:intron 65.0%
! GTCATGCAGGAGAGTGCGGC+AGG + chr6.3:69916682-69916701 MS.gene041688:intron 65.0%


Chromosome Type Strat End Strand Name
chr6.3 gene 69912442 69918261 69912442 ID=MS.gene041688
chr6.3 mRNA 69912442 69918261 69912442 ID=MS.gene041688.t1;Parent=MS.gene041688
chr6.3 exon 69912442 69912912 69912442 ID=MS.gene041688.t1.exon1;Parent=MS.gene041688.t1
chr6.3 CDS 69912442 69912912 69912442 ID=cds.MS.gene041688.t1;Parent=MS.gene041688.t1
chr6.3 exon 69913202 69913393 69913202 ID=MS.gene041688.t1.exon2;Parent=MS.gene041688.t1
chr6.3 CDS 69913202 69913393 69913202 ID=cds.MS.gene041688.t1;Parent=MS.gene041688.t1
chr6.3 exon 69913509 69913607 69913509 ID=MS.gene041688.t1.exon3;Parent=MS.gene041688.t1
chr6.3 CDS 69913509 69913607 69913509 ID=cds.MS.gene041688.t1;Parent=MS.gene041688.t1
chr6.3 exon 69913825 69913962 69913825 ID=MS.gene041688.t1.exon4;Parent=MS.gene041688.t1
chr6.3 CDS 69913825 69913962 69913825 ID=cds.MS.gene041688.t1;Parent=MS.gene041688.t1
chr6.3 exon 69914148 69914396 69914148 ID=MS.gene041688.t1.exon5;Parent=MS.gene041688.t1
chr6.3 CDS 69914148 69914396 69914148 ID=cds.MS.gene041688.t1;Parent=MS.gene041688.t1
chr6.3 exon 69914965 69915195 69914965 ID=MS.gene041688.t1.exon6;Parent=MS.gene041688.t1
chr6.3 CDS 69914965 69915195 69914965 ID=cds.MS.gene041688.t1;Parent=MS.gene041688.t1
chr6.3 exon 69916122 69916267 69916122 ID=MS.gene041688.t1.exon7;Parent=MS.gene041688.t1
chr6.3 CDS 69916122 69916267 69916122 ID=cds.MS.gene041688.t1;Parent=MS.gene041688.t1
chr6.3 exon 69916499 69916576 69916499 ID=MS.gene041688.t1.exon8;Parent=MS.gene041688.t1
chr6.3 CDS 69916499 69916576 69916499 ID=cds.MS.gene041688.t1;Parent=MS.gene041688.t1
chr6.3 exon 69916691 69916820 69916691 ID=MS.gene041688.t1.exon9;Parent=MS.gene041688.t1
chr6.3 CDS 69916691 69916820 69916691 ID=cds.MS.gene041688.t1;Parent=MS.gene041688.t1
chr6.3 exon 69917099 69917351 69917099 ID=MS.gene041688.t1.exon10;Parent=MS.gene041688.t1
chr6.3 CDS 69917099 69917351 69917099 ID=cds.MS.gene041688.t1;Parent=MS.gene041688.t1
chr6.3 exon 69917453 69917615 69917453 ID=MS.gene041688.t1.exon11;Parent=MS.gene041688.t1
chr6.3 CDS 69917453 69917615 69917453 ID=cds.MS.gene041688.t1;Parent=MS.gene041688.t1
chr6.3 exon 69918144 69918261 69918144 ID=MS.gene041688.t1.exon12;Parent=MS.gene041688.t1
chr6.3 CDS 69918144 69918261 69918144 ID=cds.MS.gene041688.t1;Parent=MS.gene041688.t1
Gene Sequence

>MS.gene041688

ATGAATCATTTTGATAAAGATGAAATTCCGATTCTGTCAGAAACACGTGGACAACGATCTGATGAACCTCAAGATTCTACCTTCAGAAGAAACATTTCGAGGACACGGAGTGCTTCAATTTCCATTCCTATGGCTTCTCTGGATCCATACGAGAGACAACCGAATCTTGTCGGACATACTGGTCCGCTTCGTACCACGAGGAAAACTCCTGTTAGCCAAATGAGTGGTCCATTATATGTTTCTCCTGCAACTGGAAATCCTTTTCAGAATAATATAATGGTGGCAGGAAACAAAGTAGGGGAGAACAAGACAGAGAAGTTTTCTACATTTGATGGCACGGATAAAAATGAACACTTGTTAAGGTCTGGACAACTAGGAATGTGTAATGATCCTTATTGTACTACTTGCCCTACTTACTTCAAAGTTGCTCAGCAAAGAAAACCAAGAGCTCCCACTATATTTGATCCTAAGGTATCTTTCTTCCTAAAGTAATAGACTTTTATATCTTCATAAATTTAAGAAAAGACTGACTTCTATGTTTTGAAATTGACATCATGACGATGATTCTGCCTTTTTTTAAAAATATAATTTATAGATATCTGATGATTTTCATATTTATAGATAGCTTTACTTTTGTTTTCAATGGCAATCGCTATGATGAATGCGCCTTTTTTGTCATATAGTTGTGCACGTTTTGTTTGTGTTTGCTGTTATTTTCACATAACCAATCATACATTTTTCATGTTTTGAATGTTTACAGTTCCACAATTCTCTTTACGGCGACGCCAAAGGTTATGGAAGAAAACTTTTTTCTTTCTGCTCTTCATGGATTCCTGGAGTTATGAATCCTCACGCGAAAGTTGTACAACAATGGAACAAGGTTTTAGCCATATTTTGCTTGGTCGCAATTTTTGTTGATCCGTTATTTTTCTTCTTACTCTATGTGGAGAAGGTATGATTCTTTTCATTTTATTTAAGTTTAAAACCTTCCAACATCATTTTACATTACTTTTTTCTTTACTTACAAATAAAATAAAACTTCGCCTTTTCTTATTCGTTTTCTGCAGAAAAATAAATGTATTCGAATCAACCACGCAATGGCAACAACACTTGTTGTACTTAGAAGCATAACTGATGTTGTGTATCTCTTGAACATTCTTCTCCAGGTAATTTTCCTTAAACATCTATTGATAGAATGATAGACCATTTGAATGTAAATGTTTCTAATGGTTGATCTTATAATTTTCCTTAGTCCCTCTTTGCTTATAGGAAGAAAAAGTGCATGTGTCTTGAATCTTAAACATGGCTGTCGAATATTATGTCTAGGTTATTTTGTTTTCATCGTTTAAGATTATATAACTCTACCAATTTCCTTTTTTGCAGTTTAGGCTGGCTTATGTTTCTCCTGAGTCAAGGGTTGTTGGTGCTGGGGATTTAGTTGACCATCCCAAGAAAATAGCTGTTAATTACTTTAAGAGCTACTTTCTCTTCGACTTATTTGTTGTATCACCTCTTCCTCAGGTATATATCTTCCTATCTCTCCATGTTGTTTGTTGACACCGTTACCTCGGTGTTGTGGATGCCTTAATAAATAGTATGCTTAATTGAACAAGTGCTTAACGATATGTATTTGACATGGAAGAAAAGGGATTTTAATCCGTGAAAAAGACTACAAGATTATGATGTGTGTTATGAAATATTTGCAGATAATGATAATATTTATCCTACCAAGTTCCTTGGGGTCATCAGGAGCAAATTATGCCAAGAATCTTCTACGTCTAGGAATCCTTATCCAATATATTCCCAGATTGTTCAGATTTTTGCCTCTGCTAATTGGTCAGTCTCCAACCGGATTCATATTCGAGTCAGCCTGGGCAAATTTCATTATAAATCTTCTGATTTTTATGCTATCCGGCCATGTTGTTGGTTCATGCTGGTACCTCTTTGGCCTACAGGTGAGTAATAAAAATGACATTTGAAGCTTCATTCTCAAAAAATAAAAAATTCACATTTTGCTCTAAATTCTCACCTTGCATTCAAATACAAAGAACCCGCATCTTCACATAATGAATGGAAAAAACAATATTAATTGATTCACTTTAATGCTTCTGATTAATAAGGTTACATCAGGCCTGTTTGGTTAGACTTATTTGAGCTTATTTATTGACTTGTGAGACTGTTTGGAACGGCTTACGGAAACAACTTATACATGTCCATCAGTTGTTTTGAGCCTATTTCCATGAGCTCTCCATGATAGCTTATGCAAACAGCTTATAGCTTATACGAAAACAAATCTGCATTTATTTTATCTTTTATCATAAGCCCTAATCAAGTTGTTTATTCAAACAGGGCCATAGTATGATAATATGTTGCAAGAATTACAATCAAAATTAAGCTTTATTATGTTTTGTTGAATGCTTTAAATAAGAATGGTTCAATTAGAATCAAGAATTTAATTCAGTAAATGAATGTTGGGTAAATTTCAATTTACTAACTTCTCTCATTTTATTTCTCTTCTTCCAGAGGGTTAACCAATGTTTGCGGGATGCCTGCCATCGTACTAATCTAACTGCATGCATGAAATTGATTGATTGTCATTATAACGATGCATGGATCCAGGATCAGGGCTCCAATGATTGTTTGAATTCTTCATCTGGTGCTTTTCCTTATGGAATTTATAACGCTGCTGTACCACTTACGATAGAAACTAGGGTGGTCAACAAATATGTGTATGCACTCTTTTGGGGATTCCAGGTATGCATTTTGCAATTTATTTTCTTCCCTCAGTTGTAATTATACAAATTTTGTCCTATAATATTGAGCTGCGAATATTCGAATTTGCTTAATATATGAGCCTCCAATGAAGATAAACAGCTTAAAGTATCTTTTTAACGACACAACATAACAAAAGGGGACTATGAAGATAAACAATGTAAATTGGTATGAAAACTCTCGTGCAAAAGTTGATATGGATGTCTCATAAGTCATAACCAGTTATGGTTGACGATAGGAAAAACAAGGTTTAGAAGTAAGAGGTGTTATTTTGACACAAAATGGAACAAGAAAATTCAAATAATTTGGTAATTTAACACAGTTCAAGTACATGGTTAAATACGTTTTGTAGATGGTTAGTGGATATAACAAGGTGTTGCAGGTCATCAGCCATGCACATAATACAATTAACGACAATTTTTAATGTTATTGACCACGATTTTCAGATGTATATTTGAACAAAAATTGTGGTTAATAGATATTATGTCTATTTGAAAATAATTTGGATTTTGGATGGTTATAGTGGATATCATGTGTATTTCAACATTTGAAAATCATGGTTAATGACGTTTAAAATAGTAGTTAATAAGGTTGAGTGGATGGTGAGTTGTGACACCTTGTTAAATTCATTAACCATCCACTGAACGTAATTACATACATATTTGAATTATGTTAACCAATCATATTGTTTTCCTCGTTTTAATTTTCATATGCAGTTTCACCAAAACACATTTATACCATTTTAACATTTAATATTATAAAAAAGGGGAAGACAAGGATTTAACTTTGAAAAAAATGATCAAAATGTTGTCTAATATCATGTCAAGGGCTAACTTGAATCAACCCTAAAAGGCAAATGAATGGTTTGATATTACTTACCAATTATACGCATGTGATCTTTAATACAGCAAATCAGTACTCTGGCTGGTAATCAACAACCAAGCTATTTTGTGTGGGAAGTTCTCTTTACAATGTCCATCATAGGATTGGGACTCTTGCTTTTTGCGCTTCTCATTGGAAACATACAGAACTTTCTTCAGGCTCTTGGACGGAGGTAGAGCGTGGTTCTCTTACTTTATGTTTATGTTAATTGTTGGTGACATCGATGCTTTGTCGTGTGTGTTTCGTTCCGTGATAACAAAAATTGATTTTGAACAAATCTTTTTTGGCTCTTCCTACCGTGAAACCAAACACACAAGTCATTCTCTTTCCTTCTAAATTAACTTCTGTTTAAAGTTCCTTTCATTTTAAAATCTTGATACATTTTGTTCCATCCTACTTACAGGAGGGTAGAAATGCAACTTAGAGGTCGTGATGTTGAGCAGTGGATGAACCATCGTCGCTTACCAGAAGAACTTAAAAGGTATGACATGTTCTTATTCTTTTAATGAATCAAATCAACATTGCCAAAACAAATCTATCAAATAATGGATTACTTATTATGGTACAAATGATGGATACTATATCTGTCATGCAGGAGAGTGCGGCAGGCTGAACGGTATAGCTGGGCTGCAACAAGGGGTGTTCCTGAGAAAATGGTTCTGGAAAATTTGCCAGAAGATCTCCAGACAGACATAAGACGCCATCTCTTCAAATTTGTTAATAAAGTATGCATTTAAAAAGAGTTCATGATATACTCTTTAAGTCGATTTTATTTATCTGGTTCAGATGTTATGTGAACTTTAAAATCTCACCTATAATGTTTTAAATAAAATTTGTCTCACCTTAAAGAGTTGAATGAGAAAACTAGTTTCAAGACAAAGGTTTATGCAAATTCATAATGAAACTAAAACAATGACGCATTAAAAGCCAATTATATTAAACAAGTTTGAATGCGATTTATGATGATGATTTAATTTTCTATGATGATCTAACATTTCTACAGGTTCGAATTTTTTCCCATATGGCTGAGGATGACCCTATCTTAGACGCCATTCGTGAGAGACTAATACAGACGACATACATTAAAGGAAGTAAAATTCTCAGTCAGGGTGGTCTTGTACAGAAGATGGTGTTTATTGTGCGTGGAAAATTGGAGAGCGTGGGAGAGGATGGAATTCCGGTTCCGTTATCAGAAGGGGATGCTTGTGGTGAAGAACTTCTAAGATGGTATCTTGAACAGTCTTCTGAAAGCAAAGGTACAACTATACTTGATATAATGATAACATGCCTCAAAAGAAGTTGTCACAATCAGCAACTTGCCTCAAACCATGTTTAATCGATGTGGTTTCTCTTGCAGAAGGGAAAAAAATAAAGCTTCACGGCCAGGGTTTGACTAGCGACCGAACAGTAAGATGCTTAACCAATGTGGAGGCATTTTCACTCCGTGCTAAAGACATTGAAGAAGTCACAACTCTTTTCGCAAGATATTTGCGGAGCCCTCGTGTTCAAGGAGTTATAAGGTCATTTATTTATTCATCCATCCCATTCCCCTTCTGTCTTTGTGTCAATACTTCAATATATCTTCACCCTTTTATGATTCAATTGCATTTCGGTGTTGTGTTTGGGTTGGGCTTAACTCAACCCTACAGAGCCGTCTTATAAGGTTAAGAACACCCATCACTTATAAACACATTCTCAGACCTTATCTCTTTTTTAAGTGGGACTTGGATTTTTCCTAATACGCCCGAATCTATTGTACTCGGCGCATGAATATAAATGATGGGTGGTTCAAATCAATAGGCTCTCCGATACCATCTTAGAATTTGAGTTAGGCCTAACTCAACCATTAAAACACTGGCTTGATAGGTGGGAAGTAAGAGCTACCCACCACTTGAATACATATTGTCATATCTTATCTCATCCAATATTGAACTCATAACAATTTGCATATCTGATACAAATCCATAAGTATGCTATTTACATGCCTAATATCTATTATCAAAACCATGTCTCTGACATAATAATTTGGTTGTTTTGTCTTATGCTAGGTATGAATCACCTTACTGGAGATCTTTTGCAGCAAACAGAATTCAGGTTGCATGGAGATACAGGAAGAAACGTCTAAGTCGAGCTAATACCGCACAAAATGATTATCAAACATATTGA
Protein sequence

>MS.gene041688.t1

MNHFDKDEIPILSETRGQRSDEPQDSTFRRNISRTRSASISIPMASLDPYERQPNLVGHTGPLRTTRKTPVSQMSGPLYVSPATGNPFQNNIMVAGNKVGENKTEKFSTFDGTDKNEHLLRSGQLGMCNDPYCTTCPTYFKVAQQRKPRAPTIFDPKFHNSLYGDAKGYGRKLFSFCSSWIPGVMNPHAKVVQQWNKVLAIFCLVAIFVDPLFFFLLYVEKKNKCIRINHAMATTLVVLRSITDVVYLLNILLQFRLAYVSPESRVVGAGDLVDHPKKIAVNYFKSYFLFDLFVVSPLPQIMIIFILPSSLGSSGANYAKNLLRLGILIQYIPRLFRFLPLLIGQSPTGFIFESAWANFIINLLIFMLSGHVVGSCWYLFGLQRVNQCLRDACHRTNLTACMKLIDCHYNDAWIQDQGSNDCLNSSSGAFPYGIYNAAVPLTIETRVVNKYVYALFWGFQQISTLAGNQQPSYFVWEVLFTMSIIGLGLLLFALLIGNIQNFLQALGRRRVEMQLRGRDVEQWMNHRRLPEELKRRVRQAERYSWAATRGVPEKMVLENLPEDLQTDIRRHLFKFVNKVRIFSHMAEDDPILDAIRERLIQTTYIKGSKILSQGGLVQKMVFIVRGKLESVGEDGIPVPLSEGDACGEELLRWYLEQSSESKEGKKIKLHGQGLTSDRTVRCLTNVEAFSLRAKDIEEVTTLFARYLRSPRVQGVIRYESPYWRSFAANRIQVAWRYRKKRLSRANTAQNDYQTY