Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene042141.t1 | XP_003610495.1 | 97.6 | 542 | 13 | 0 | 1 | 542 | 1 | 542 | 0.00E+00 | 1075.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene042141.t1 | Q94CF0 | 74.7 | 538 | 129 | 2 | 10 | 542 | 10 | 545 | 5.3e-242 | 838.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene042141.t1 | G7JKG5 | 97.6 | 542 | 13 | 0 | 1 | 542 | 1 | 542 | 0.0e+00 | 1075.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene042141 | MS.gene63806 | PPI |
| MS.gene93693 | MS.gene042141 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene042141.t1 | MTR_4g132840 | 97.601 | 542 | 13 | 0 | 1 | 542 | 1 | 542 | 0.0 | 1099 |
| MS.gene042141.t1 | MTR_2g025180 | 80.524 | 534 | 101 | 1 | 12 | 542 | 7 | 540 | 0.0 | 910 |
| MS.gene042141.t1 | MTR_5g093720 | 75.651 | 538 | 126 | 2 | 8 | 542 | 8 | 543 | 0.0 | 845 |
| MS.gene042141.t1 | MTR_3g054130 | 72.523 | 535 | 139 | 3 | 10 | 541 | 13 | 542 | 0.0 | 799 |
| MS.gene042141.t1 | MTR_3g054210 | 80.000 | 385 | 75 | 1 | 155 | 539 | 54 | 436 | 0.0 | 659 |
| MS.gene042141.t1 | MTR_5g093720 | 75.194 | 387 | 91 | 2 | 8 | 391 | 8 | 392 | 0.0 | 597 |
| MS.gene042141.t1 | MTR_3g115640 | 42.857 | 84 | 48 | 0 | 15 | 98 | 6 | 89 | 3.96e-14 | 76.3 |
| MS.gene042141.t1 | MTR_5g099170 | 30.247 | 162 | 105 | 2 | 10 | 168 | 5 | 161 | 5.24e-13 | 72.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene042141.t1 | AT4G05520 | 73.978 | 538 | 136 | 2 | 8 | 542 | 9 | 545 | 0.0 | 846 |
| MS.gene042141.t1 | AT4G05520 | 73.743 | 537 | 138 | 2 | 8 | 542 | 9 | 544 | 0.0 | 845 |
| MS.gene042141.t1 | AT3G20290 | 73.481 | 543 | 127 | 2 | 10 | 542 | 10 | 545 | 0.0 | 837 |
| MS.gene042141.t1 | AT3G20290 | 73.481 | 543 | 127 | 2 | 10 | 542 | 10 | 545 | 0.0 | 837 |
| MS.gene042141.t1 | AT3G20290 | 73.481 | 543 | 127 | 2 | 10 | 542 | 10 | 545 | 0.0 | 837 |
| MS.gene042141.t1 | AT1G21630 | 45.000 | 80 | 44 | 0 | 19 | 98 | 13 | 92 | 1.53e-14 | 77.4 |
| MS.gene042141.t1 | AT1G21630 | 45.000 | 80 | 44 | 0 | 19 | 98 | 13 | 92 | 1.60e-14 | 77.4 |
| MS.gene042141.t1 | AT1G21630 | 45.000 | 80 | 44 | 0 | 19 | 98 | 13 | 92 | 1.60e-14 | 77.4 |
| MS.gene042141.t1 | AT1G21630 | 45.000 | 80 | 44 | 0 | 19 | 98 | 13 | 92 | 1.64e-14 | 77.4 |
| MS.gene042141.t1 | AT1G20760 | 30.573 | 157 | 97 | 4 | 13 | 157 | 5 | 161 | 3.48e-14 | 76.3 |
Find 108 sgRNAs with CRISPR-Local
Find 257 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGCAGCTCATGAGAGTTTA+TGG | 0.160965 | 8.3:+1199706 | MS.gene042141:intron |
| CCAACAAAGCCTTCATTTAT+AGG | 0.188899 | 8.3:-1200145 | None:intergenic |
| CGACCGTCACACGCCTTTCT+TGG | 0.227930 | 8.3:-1200232 | None:intergenic |
| TGGTTCATCTTAGCCGATTC+AGG | 0.263979 | 8.3:+1196369 | MS.gene042141:CDS |
| AATGCCCAACCTGATGTATT+TGG | 0.273045 | 8.3:+1197902 | MS.gene042141:CDS |
| ATATATACACGTACAACTTC+TGG | 0.293769 | 8.3:-1199766 | None:intergenic |
| GAAGTTGTACGTGTATATAT+TGG | 0.299728 | 8.3:+1199769 | MS.gene042141:CDS |
| CAAACATCACTTACCAATAA+TGG | 0.301165 | 8.3:-1198559 | None:intergenic |
| TGGAGCACTGATGTGGTCTT+TGG | 0.305099 | 8.3:+1199726 | MS.gene042141:CDS |
| TTTAGTGGCCTGACAACTTT+TGG | 0.307719 | 8.3:+1199204 | MS.gene042141:CDS |
| ACTGATGAGAGGAGCATTCC+TGG | 0.309209 | 8.3:+1199150 | MS.gene042141:CDS |
| TTACTTGTTGAGTATCAATT+TGG | 0.313457 | 8.3:-1199590 | None:intergenic |
| TCTCTGAAGTGATCAATATT+AGG | 0.314915 | 8.3:-1200666 | None:intergenic |
| TCTGGAAGATGAATTTAAAA+AGG | 0.325418 | 8.3:+1200528 | MS.gene042141:CDS |
| ATTTAGAAATCCTTATGATT+AGG | 0.327594 | 8.3:+1200794 | MS.gene042141:CDS |
| AAATGATCTCCTTTCAGATT+TGG | 0.327851 | 8.3:+1200201 | MS.gene042141:CDS |
| ACAAAGGCTTATAGATAATC+TGG | 0.328439 | 8.3:+1200510 | MS.gene042141:CDS |
| GAAGGCTTTGTTGGCCCATT+AGG | 0.330059 | 8.3:+1200154 | MS.gene042141:CDS |
| CCTATAAATGAAGGCTTTGT+TGG | 0.345953 | 8.3:+1200145 | MS.gene042141:CDS |
| TTAGCTTTGCCCATCATTGC+AGG | 0.348004 | 8.3:-1200481 | None:intergenic |
| CTAAATTTCTTTAAGAGCTC+TGG | 0.348355 | 8.3:-1200777 | None:intergenic |
| AAACCAATGATCATGCTTCT+TGG | 0.354900 | 8.3:+1198731 | MS.gene042141:CDS |
| CTTGACACAGGGGCACATAT+TGG | 0.369302 | 8.3:+1198923 | MS.gene042141:intron |
| TGTTTGTTTAATTAGAATAC+AGG | 0.374061 | 8.3:+1197866 | MS.gene042141:intron |
| AATACGCGTTGTGTTGAATA+AGG | 0.381834 | 8.3:+1199563 | MS.gene042141:CDS |
| AAAGTTGTCAGGCCACTAAA+AGG | 0.381997 | 8.3:-1199201 | None:intergenic |
| AATCTGTCGGTCGTGGGCTC+TGG | 0.382600 | 8.3:-1198947 | None:intergenic |
| GACACCCCTGGTGTCCTCTC+TGG | 0.384423 | 8.3:+1199381 | MS.gene042141:CDS |
| CTCATTTCTGTGGGACAGGC+GGG | 0.402719 | 8.3:+1196891 | MS.gene042141:CDS |
| CGGCTAAGATGAACCATTGC+TGG | 0.403204 | 8.3:-1196362 | None:intergenic |
| TATAATTAGTCGTCTTAAGA+TGG | 0.405307 | 8.3:+1200453 | MS.gene042141:CDS |
| TTGTATAAACCTGCTTGAGC+TGG | 0.410116 | 8.3:-1196557 | None:intergenic |
| GCAGTGACATCAATAATAGA+TGG | 0.412207 | 8.3:+1198466 | MS.gene042141:CDS |
| TTTGAAGCAACTGGTGGAAA+AGG | 0.416156 | 8.3:-1198029 | None:intergenic |
| CGAGTTTGTGAGGATCAAAT+AGG | 0.427269 | 8.3:-1199485 | None:intergenic |
| TGACCAAGAAGCATGATCAT+TGG | 0.434822 | 8.3:-1198734 | None:intergenic |
| GGAGCACTGATGTGGTCTTT+GGG | 0.444899 | 8.3:+1199727 | MS.gene042141:CDS |
| CTTTGTTGGCCCATTAGGAC+AGG | 0.454491 | 8.3:+1200159 | MS.gene042141:CDS |
| AGCAACAAATCTGTCGGTCG+TGG | 0.463455 | 8.3:-1198954 | None:intergenic |
| AAGTTGTACGTGTATATATT+GGG | 0.465764 | 8.3:+1199770 | MS.gene042141:CDS |
| AAGAAAGGCGTGTGACGGTC+GGG | 0.466010 | 8.3:+1200234 | MS.gene042141:CDS |
| TTTGGTAGATATTCCAAGAA+AGG | 0.467486 | 8.3:+1200219 | MS.gene042141:CDS |
| TCGACAGCTACAGTATTTCC+AGG | 0.474626 | 8.3:-1199168 | None:intergenic |
| TGTATAAACCTGCTTGAGCT+GGG | 0.475887 | 8.3:-1196556 | None:intergenic |
| CGACAGATTTGTTGCTGTCA+TGG | 0.478189 | 8.3:+1198961 | MS.gene042141:CDS |
| GATGGAGATGCCTGCAATGA+TGG | 0.484172 | 8.3:+1200471 | MS.gene042141:CDS |
| AGATGAAAACAGTTTCGGAT+TGG | 0.485016 | 8.3:+1196304 | None:intergenic |
| GCTAGATGAAATAACATTTG+TGG | 0.485142 | 8.3:+1199359 | MS.gene042141:CDS |
| GCGTCGATTCCTTCCATGAC+TGG | 0.495974 | 8.3:-1197743 | None:intergenic |
| TGTGCTCATTCGAAGAAGAA+TGG | 0.500241 | 8.3:-1196329 | None:intergenic |
| TGCTTCAAAATCTGTAAAGA+AGG | 0.508344 | 8.3:+1198043 | MS.gene042141:CDS |
| AGAGTTTGTTACTGCAATGC+AGG | 0.509107 | 8.3:+1196764 | MS.gene042141:CDS |
| TGTGGAGCGGTTAAAACCAT+TGG | 0.509696 | 8.3:+1198504 | MS.gene042141:CDS |
| CATGTCTTACCAAATACATC+AGG | 0.511926 | 8.3:-1197911 | None:intergenic |
| AACGATAGGCCTATAAATGA+AGG | 0.512787 | 8.3:+1200136 | MS.gene042141:CDS |
| CTTACCAAATACATCAGGTT+GGG | 0.513555 | 8.3:-1197906 | None:intergenic |
| ATCTTGCAAAACAGGTTCAA+AGG | 0.513723 | 8.3:+1200616 | MS.gene042141:intron |
| TTGCTAAGATGTGAATATCC+AGG | 0.514496 | 8.3:+1198791 | MS.gene042141:CDS |
| TCTTGCAAAACAGGTTCAAA+GGG | 0.520886 | 8.3:+1200617 | MS.gene042141:intron |
| ACAGCTCATTTCTGTGGGAC+AGG | 0.521260 | 8.3:+1196887 | MS.gene042141:intron |
| CAACGAAGTTATGATTTCAC+TGG | 0.522621 | 8.3:+1199420 | MS.gene042141:CDS |
| ATCATAGGTTTGGGCTATTG+CGG | 0.524238 | 8.3:+1196710 | MS.gene042141:intron |
| TAGCATCATTTCCACTGATA+CGG | 0.530170 | 8.3:-1196500 | None:intergenic |
| CAAGAAAGGCGTGTGACGGT+CGG | 0.530982 | 8.3:+1200233 | MS.gene042141:CDS |
| ACGAACTACCAAAAGTTGTC+AGG | 0.533920 | 8.3:-1199212 | None:intergenic |
| AATCGATAAGTGACCTCCAA+TGG | 0.536634 | 8.3:-1198520 | None:intergenic |
| AACATACAGCTCATTTCTGT+GGG | 0.538922 | 8.3:+1196882 | MS.gene042141:intron |
| TAACATACAGCTCATTTCTG+TGG | 0.543650 | 8.3:+1196881 | MS.gene042141:intron |
| AGGGAGTTTCATCTGCCAGC+TGG | 0.548527 | 8.3:+1200636 | MS.gene042141:CDS |
| CTTCTTGGTCAATATTCCAC+AGG | 0.551134 | 8.3:+1198746 | MS.gene042141:CDS |
| AAAGATCAAACTTCCAGTCA+TGG | 0.553680 | 8.3:+1197730 | MS.gene042141:CDS |
| CAAGCTGTAGATGACATGCT+TGG | 0.556132 | 8.3:+1200744 | MS.gene042141:CDS |
| TGCAATGATGGGCAAAGCTA+AGG | 0.558316 | 8.3:+1200483 | MS.gene042141:CDS |
| GATGGAGATGGCCGTATCAG+TGG | 0.562870 | 8.3:+1196489 | MS.gene042141:intron |
| GCTCATTTCTGTGGGACAGG+CGG | 0.569244 | 8.3:+1196890 | MS.gene042141:intron |
| ATTTCACTGGTGTTATATCG+TGG | 0.572590 | 8.3:+1199433 | MS.gene042141:CDS |
| ATGGAGATGCCTGCAATGAT+GGG | 0.573266 | 8.3:+1200472 | MS.gene042141:CDS |
| ATCAAACTTCCAGTCATGGA+AGG | 0.574841 | 8.3:+1197734 | MS.gene042141:CDS |
| GGAGCGGTTAAAACCATTGG+AGG | 0.579905 | 8.3:+1198507 | MS.gene042141:CDS |
| CAGTGACATCAATAATAGAT+GGG | 0.583352 | 8.3:+1198467 | MS.gene042141:CDS |
| TCTTACCAAATACATCAGGT+TGG | 0.584546 | 8.3:-1197907 | None:intergenic |
| GTTTGTTTAATTAGAATACA+GGG | 0.584681 | 8.3:+1197867 | MS.gene042141:intron |
| GCAACTGGTGGAAAAGGCCG+AGG | 0.585876 | 8.3:-1198023 | None:intergenic |
| TATAAACCTGCTTGAGCTGG+GGG | 0.587511 | 8.3:-1196554 | None:intergenic |
| ACTTAGGTACTGGTCAGCCT+CGG | 0.589702 | 8.3:+1198006 | MS.gene042141:intron |
| ATTCCAAGAAAGGCGTGTGA+CGG | 0.590078 | 8.3:+1200229 | MS.gene042141:CDS |
| GTATAAACCTGCTTGAGCTG+GGG | 0.592484 | 8.3:-1196555 | None:intergenic |
| ATATTAGGAAAATCACCAGC+TGG | 0.597150 | 8.3:-1200651 | None:intergenic |
| ACATTGAAACGTACCAGCAA+TGG | 0.600140 | 8.3:+1196349 | MS.gene042141:CDS |
| ATAACATTTGTGGACACCCC+TGG | 0.602613 | 8.3:+1199369 | MS.gene042141:CDS |
| TCATTTCTGTGGGACAGGCG+GGG | 0.609400 | 8.3:+1196892 | MS.gene042141:CDS |
| TCACTGATGTCGAGTTTGTG+AGG | 0.613213 | 8.3:-1199495 | None:intergenic |
| TGGGTTGAAGAAATTGTATG+TGG | 0.618187 | 8.3:+1198486 | MS.gene042141:CDS |
| GAATATCTACCAAATCTGAA+AGG | 0.620381 | 8.3:-1200210 | None:intergenic |
| GCAACAAATCTGTCGGTCGT+GGG | 0.626494 | 8.3:-1198953 | None:intergenic |
| TTTAGCATCAAAATCACTGT+CGG | 0.628300 | 8.3:-1198711 | None:intergenic |
| TGAAGAAATTGTATGTGGAG+CGG | 0.633851 | 8.3:+1198491 | MS.gene042141:CDS |
| GCAAAGCTAAGGTGCAACAA+AGG | 0.634595 | 8.3:+1200494 | MS.gene042141:CDS |
| TTCTCCAGAGAGGACACCAG+GGG | 0.637406 | 8.3:-1199385 | None:intergenic |
| TGTAGTCTGGAACTGATGAG+AGG | 0.669559 | 8.3:+1199139 | MS.gene042141:intron |
| CATGACAGCAACAAATCTGT+CGG | 0.672357 | 8.3:-1198960 | None:intergenic |
| TGATTGATGGTAGATGGAGA+TGG | 0.672828 | 8.3:+1196477 | MS.gene042141:intron |
| TTTCTCCAGAGAGGACACCA+GGG | 0.678570 | 8.3:-1199386 | None:intergenic |
| ATTGATGTCACTGCACTGAG+AGG | 0.682164 | 8.3:-1198457 | None:intergenic |
| ATTGCGGATACTAAGAGACA+AGG | 0.684993 | 8.3:+1196726 | MS.gene042141:CDS |
| TAATATTGATCACTTCAGAG+AGG | 0.691370 | 8.3:+1200668 | MS.gene042141:CDS |
| GAGTTTATGGAGCACTGATG+TGG | 0.700795 | 8.3:+1199719 | MS.gene042141:CDS |
| CGAGTGATTTACTCTCTACG+CGG | 0.776293 | 8.3:+1199528 | MS.gene042141:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATTTAATTGATATTACTT+AGG | + | chr8.3:1197990-1198009 | MS.gene042141:intron | 10.0% |
| !! | ATGAAAATACAAACAAATAA+AGG | - | chr8.3:1200347-1200366 | None:intergenic | 15.0% |
| !! | TCTTAAATAATTGTTGAAAT+GGG | + | chr8.3:1197490-1197509 | MS.gene042141:intron | 15.0% |
| !!! | AATTTTTTATTTGCTTTCAT+AGG | - | chr8.3:1198113-1198132 | None:intergenic | 15.0% |
| !!! | TTATTTCTTTATTAATGACA+TGG | + | chr8.3:1197941-1197960 | MS.gene042141:intron | 15.0% |
| !!! | TTTTATATTATTTTTAGACC+TGG | + | chr8.3:1200267-1200286 | MS.gene042141:intron | 15.0% |
| !! | AAAATTGAAGTTAAACTGAA+GGG | - | chr8.3:1197629-1197648 | None:intergenic | 20.0% |
| !! | AAATTAGAAAAACAAGTTGT+CGG | - | chr8.3:1199656-1199675 | None:intergenic | 20.0% |
| !! | AAGATATAAAAAAAACTCAC+TGG | - | chr8.3:1199273-1199292 | None:intergenic | 20.0% |
| !! | AGGTAATACAAGATTAATAA+AGG | - | chr8.3:1198899-1198918 | None:intergenic | 20.0% |
| !! | AGTTATACATCTATATTTCA+AGG | + | chr8.3:1197400-1197419 | MS.gene042141:intron | 20.0% |
| !! | CAACTGAAATTAATAGAAAT+GGG | - | chr8.3:1197703-1197722 | None:intergenic | 20.0% |
| !! | GAAAAAGAAAAAGTGATAAT+TGG | - | chr8.3:1196449-1196468 | None:intergenic | 20.0% |
| !! | GTATATAATGTATTATCTGT+TGG | + | chr8.3:1197584-1197603 | MS.gene042141:intron | 20.0% |
| !! | GTCTTAAATAATTGTTGAAA+TGG | + | chr8.3:1197489-1197508 | MS.gene042141:intron | 20.0% |
| !! | GTTTGTTTAATTAGAATACA+GGG | + | chr8.3:1197867-1197886 | MS.gene042141:intron | 20.0% |
| !! | TAGATTTGATTAACATCTAA+CGG | - | chr8.3:1199020-1199039 | None:intergenic | 20.0% |
| !! | TCAACTGAAATTAATAGAAA+TGG | - | chr8.3:1197704-1197723 | None:intergenic | 20.0% |
| !! | TGTTTGTTTAATTAGAATAC+AGG | + | chr8.3:1197866-1197885 | MS.gene042141:intron | 20.0% |
| !!! | AAAACTTCATTTTGTCAAAA+TGG | - | chr8.3:1198089-1198108 | None:intergenic | 20.0% |
| !!! | AAACTTCATTTTGTCAAAAT+GGG | - | chr8.3:1198088-1198107 | None:intergenic | 20.0% |
| !!! | ACAACTTGTTTTTCTAATTT+TGG | + | chr8.3:1199656-1199675 | MS.gene042141:intron | 20.0% |
| !!! | ATCTTTTTTTATTTGTAGTC+TGG | + | chr8.3:1199126-1199145 | MS.gene042141:intron | 20.0% |
| !!! | ATTACTATGCATAAACATTT+TGG | + | chr8.3:1198324-1198343 | MS.gene042141:intron | 20.0% |
| !!! | TCTTTATGCTTTCATAATTT+TGG | + | chr8.3:1199893-1199912 | MS.gene042141:intron | 20.0% |
| !!! | TTGTACTAGATAATTTTTCA+TGG | - | chr8.3:1197091-1197110 | None:intergenic | 20.0% |
| !!! | TTGTTTGTATTTTCATTTTC+CGG | + | chr8.3:1200351-1200370 | MS.gene042141:intron | 20.0% |
| ! | AAGTTGTACGTGTATATATT+GGG | + | chr8.3:1199770-1199789 | MS.gene042141:CDS | 25.0% |
| ! | AATATGTAACGAAGAAACTA+AGG | - | chr8.3:1200586-1200605 | None:intergenic | 25.0% |
| ! | AATTGATATTACTTAGGTAC+TGG | + | chr8.3:1197996-1198015 | MS.gene042141:intron | 25.0% |
| ! | ACTTAATTGTAACTGAAATG+AGG | - | chr8.3:1196611-1196630 | None:intergenic | 25.0% |
| ! | ATTTATGAACTTTCTCTTGT+TGG | - | chr8.3:1197359-1197378 | None:intergenic | 25.0% |
| ! | CTGCTGAATGTAAATAATTT+GGG | + | chr8.3:1197285-1197304 | MS.gene042141:intron | 25.0% |
| ! | GAAAACAAACCAATAAGAAA+AGG | - | chr8.3:1197846-1197865 | None:intergenic | 25.0% |
| ! | GAAAATTGAAGTTAAACTGA+AGG | - | chr8.3:1197630-1197649 | None:intergenic | 25.0% |
| ! | GCAAAATAAGGAAACAAAAA+TGG | - | chr8.3:1200564-1200583 | None:intergenic | 25.0% |
| ! | TAGCTATTAGGCTTAATTAA+TGG | + | chr8.3:1197330-1197349 | MS.gene042141:intron | 25.0% |
| ! | TATAATTAGTCGTCTTAAGA+TGG | + | chr8.3:1200453-1200472 | MS.gene042141:CDS | 25.0% |
| ! | TATTTCTTCATCATAGGTTT+GGG | + | chr8.3:1196701-1196720 | MS.gene042141:intron | 25.0% |
| ! | TCTGCTGAATGTAAATAATT+TGG | + | chr8.3:1197284-1197303 | MS.gene042141:intron | 25.0% |
| ! | TCTGGAAGATGAATTTAAAA+AGG | + | chr8.3:1200528-1200547 | MS.gene042141:CDS | 25.0% |
| ! | TGAATGTAAATAATTTGGGA+TGG | + | chr8.3:1197289-1197308 | MS.gene042141:intron | 25.0% |
| !! | AATTTTTCATGGAACAATAG+TGG | - | chr8.3:1197080-1197099 | None:intergenic | 25.0% |
| !! | ATTTCCTATTTCTTCATCAT+AGG | + | chr8.3:1196695-1196714 | MS.gene042141:intron | 25.0% |
| !! | TAAACAAAACTGTTCCTTTT+GGG | + | chr8.3:1199038-1199057 | MS.gene042141:intron | 25.0% |
| !! | TGAACTTACTTTCTGTTTTA+AGG | - | chr8.3:1196938-1196957 | None:intergenic | 25.0% |
| !! | TGATTTTGTATCTCCATTAT+TGG | + | chr8.3:1198546-1198565 | MS.gene042141:CDS | 25.0% |
| !! | TTACTTGTTGAGTATCAATT+TGG | - | chr8.3:1199593-1199612 | None:intergenic | 25.0% |
| !!! | ATGACATCATATTTTAGAAC+CGG | - | chr8.3:1200373-1200392 | None:intergenic | 25.0% |
| !!! | CTTTCATAATTTTGGTGAAA+AGG | + | chr8.3:1199901-1199920 | MS.gene042141:intron | 25.0% |
| !!! | GTTCTAAAATATGATGTCAT+TGG | + | chr8.3:1200373-1200392 | MS.gene042141:intron | 25.0% |
| !!! | TTGTTGATTCCTTTTCTTAT+TGG | + | chr8.3:1197834-1197853 | MS.gene042141:intron | 25.0% |
| !!! | TTTTCGTTTTCATTGATTGA+TGG | + | chr8.3:1196464-1196483 | MS.gene042141:intron | 25.0% |
| AAATGATCTCCTTTCAGATT+TGG | + | chr8.3:1200201-1200220 | MS.gene042141:CDS | 30.0% | |
| AAGGAAACAAAAATGGAAGT+AGG | - | chr8.3:1200557-1200576 | None:intergenic | 30.0% | |
| AATATGATGTCATTGGAATG+AGG | + | chr8.3:1200380-1200399 | MS.gene042141:intron | 30.0% | |
| ACAAAGGCTTATAGATAATC+TGG | + | chr8.3:1200510-1200529 | MS.gene042141:CDS | 30.0% | |
| ACAAGTTGTCGGAAATATTT+AGG | - | chr8.3:1199645-1199664 | None:intergenic | 30.0% | |
| AGTCCATTAGAAATACAAAC+TGG | - | chr8.3:1198196-1198215 | None:intergenic | 30.0% | |
| ATATATACACGTACAACTTC+TGG | - | chr8.3:1199769-1199788 | None:intergenic | 30.0% | |
| CAAACATCACTTACCAATAA+TGG | - | chr8.3:1198562-1198581 | None:intergenic | 30.0% | |
| CAAACCTATGATGAAGAAAT+AGG | - | chr8.3:1196702-1196721 | None:intergenic | 30.0% | |
| CAGTGACATCAATAATAGAT+GGG | + | chr8.3:1198467-1198486 | MS.gene042141:CDS | 30.0% | |
| CTGAAGAATGTCAAATTAAC+TGG | - | chr8.3:1200075-1200094 | None:intergenic | 30.0% | |
| GAAGAAACTAAGGCAAAATA+AGG | - | chr8.3:1200576-1200595 | None:intergenic | 30.0% | |
| GAAGTAGAAAAAACCTGAAT+CGG | - | chr8.3:1196385-1196404 | None:intergenic | 30.0% | |
| GAAGTTGTACGTGTATATAT+TGG | + | chr8.3:1199769-1199788 | MS.gene042141:CDS | 30.0% | |
| GAATATCTACCAAATCTGAA+AGG | - | chr8.3:1200213-1200232 | None:intergenic | 30.0% | |
| GCTAGATGAAATAACATTTG+TGG | + | chr8.3:1199359-1199378 | MS.gene042141:CDS | 30.0% | |
| GTCATTATGACTAACAAGTT+AGG | + | chr8.3:1198663-1198682 | MS.gene042141:intron | 30.0% | |
| TAAAAAAAACTCACTGGATG+TGG | - | chr8.3:1199267-1199286 | None:intergenic | 30.0% | |
| TAACATCTAACGGAAATACA+AGG | - | chr8.3:1199010-1199029 | None:intergenic | 30.0% | |
| TAATATTGATCACTTCAGAG+AGG | + | chr8.3:1200668-1200687 | MS.gene042141:CDS | 30.0% | |
| TACAAAATGTTGTCAAGTAG+CGG | + | chr8.3:1197106-1197125 | MS.gene042141:intron | 30.0% | |
| TATATACTGCTTTGACATAG+TGG | + | chr8.3:1197042-1197061 | MS.gene042141:intron | 30.0% | |
| TCATCAAGATATACACATGA+AGG | - | chr8.3:1198860-1198879 | None:intergenic | 30.0% | |
| TGCTTCAAAATCTGTAAAGA+AGG | + | chr8.3:1198043-1198062 | MS.gene042141:CDS | 30.0% | |
| TTACTATCATCTTGCAAAAC+AGG | + | chr8.3:1200608-1200627 | MS.gene042141:intron | 30.0% | |
| TTATGATGTTCAATTGCAAC+AGG | - | chr8.3:1199871-1199890 | None:intergenic | 30.0% | |
| TTTACATTCAGCAGATAAAG+AGG | - | chr8.3:1197279-1197298 | None:intergenic | 30.0% | |
| TTTAGCATCAAAATCACTGT+CGG | - | chr8.3:1198714-1198733 | None:intergenic | 30.0% | |
| TTTGGTAGATATTCCAAGAA+AGG | + | chr8.3:1200219-1200238 | MS.gene042141:CDS | 30.0% | |
| ! | AAACAAAACTGTTCCTTTTG+GGG | + | chr8.3:1199039-1199058 | MS.gene042141:intron | 30.0% |
| ! | CTAAACAAAACTGTTCCTTT+TGG | + | chr8.3:1199037-1199056 | MS.gene042141:intron | 30.0% |
| ! | CTAAATTTCTTTAAGAGCTC+TGG | - | chr8.3:1200780-1200799 | None:intergenic | 30.0% |
| ! | CTATTTCTTCATCATAGGTT+TGG | + | chr8.3:1196700-1196719 | MS.gene042141:intron | 30.0% |
| ! | GTACCAGTTTGTATTTCTAA+TGG | + | chr8.3:1198190-1198209 | MS.gene042141:intron | 30.0% |
| ! | GTGTATATCTTGATGATAGA+GGG | + | chr8.3:1198864-1198883 | MS.gene042141:intron | 30.0% |
| ! | TAAGACCAGATGATTTTCTT+AGG | - | chr8.3:1197475-1197494 | None:intergenic | 30.0% |
| ! | TCTACAGCTTGAATCATTTT+AGG | - | chr8.3:1200735-1200754 | None:intergenic | 30.0% |
| ! | TGTATATCTTGATGATAGAG+GGG | + | chr8.3:1198865-1198884 | MS.gene042141:intron | 30.0% |
| ! | TGTGTATATCTTGATGATAG+AGG | + | chr8.3:1198863-1198882 | MS.gene042141:intron | 30.0% |
| ! | TTGTTTTCGCATTACGTTAA+TGG | + | chr8.3:1200040-1200059 | MS.gene042141:intron | 30.0% |
| ! | TTTCATTGATTGATGGTAGA+TGG | + | chr8.3:1196471-1196490 | MS.gene042141:intron | 30.0% |
| !! | ATAATTTTGGTGAAAAGGCT+TGG | + | chr8.3:1199906-1199925 | MS.gene042141:intron | 30.0% |
| !! | ATGTATGCTGAGTTTTAACA+TGG | + | chr8.3:1196810-1196829 | MS.gene042141:intron | 30.0% |
| !! | TCTCTGAAGTGATCAATATT+AGG | - | chr8.3:1200669-1200688 | None:intergenic | 30.0% |
| !!! | ACTAAGAGACAAGGTTTTTT+AGG | + | chr8.3:1196735-1196754 | MS.gene042141:CDS | 30.0% |
| !!! | TATAAATGTTGTTTTGCCTG+TGG | - | chr8.3:1198765-1198784 | None:intergenic | 30.0% |
| !!! | TTTACAGATTTTGAAGCAAC+TGG | - | chr8.3:1198041-1198060 | None:intergenic | 30.0% |
| AAACCAATGATCATGCTTCT+TGG | + | chr8.3:1198731-1198750 | MS.gene042141:CDS | 35.0% | |
| AAAGATCAAACTTCCAGTCA+TGG | + | chr8.3:1197730-1197749 | MS.gene042141:CDS | 35.0% | |
| AACATACAGCTCATTTCTGT+GGG | + | chr8.3:1196882-1196901 | MS.gene042141:intron | 35.0% | |
| AACGATAGGCCTATAAATGA+AGG | + | chr8.3:1200136-1200155 | MS.gene042141:CDS | 35.0% | |
| AATACGCGTTGTGTTGAATA+AGG | + | chr8.3:1199563-1199582 | MS.gene042141:CDS | 35.0% | |
| ACAGACCTAAGAAAATCATC+TGG | + | chr8.3:1197467-1197486 | MS.gene042141:intron | 35.0% | |
| ATATTAGGAAAATCACCAGC+TGG | - | chr8.3:1200654-1200673 | None:intergenic | 35.0% | |
| ATCTTGCAAAACAGGTTCAA+AGG | + | chr8.3:1200616-1200635 | MS.gene042141:intron | 35.0% | |
| ATTACCTTACTCTTGACACA+GGG | + | chr8.3:1198912-1198931 | MS.gene042141:intron | 35.0% | |
| CAAAAAGTTCCTGTCCTAAT+GGG | - | chr8.3:1200171-1200190 | None:intergenic | 35.0% | |
| CAAAACAATGTTGTCAATCG+TGG | - | chr8.3:1197194-1197213 | None:intergenic | 35.0% | |
| CAACGAAGTTATGATTTCAC+TGG | + | chr8.3:1199420-1199439 | MS.gene042141:CDS | 35.0% | |
| CAAGGTAGTATCATGATTCA+TGG | + | chr8.3:1198633-1198652 | MS.gene042141:intron | 35.0% | |
| CATGTCTTACCAAATACATC+AGG | - | chr8.3:1197914-1197933 | None:intergenic | 35.0% | |
| CCAACAAAGCCTTCATTTAT+AGG | - | chr8.3:1200148-1200167 | None:intergenic | 35.0% | |
| CTTACCAAATACATCAGGTT+GGG | - | chr8.3:1197909-1197928 | None:intergenic | 35.0% | |
| GCAGTGACATCAATAATAGA+TGG | + | chr8.3:1198466-1198485 | MS.gene042141:CDS | 35.0% | |
| GTACACTTCATATGTGAACA+AGG | + | chr8.3:1198615-1198634 | MS.gene042141:intron | 35.0% | |
| GTACTCATTGTGTAGCTATT+AGG | + | chr8.3:1197318-1197337 | MS.gene042141:intron | 35.0% | |
| GTCATGATAAGGATGATGAA+GGG | + | chr8.3:1197233-1197252 | MS.gene042141:intron | 35.0% | |
| GTTGTCGGAAATATTTAGGT+CGG | - | chr8.3:1199641-1199660 | None:intergenic | 35.0% | |
| TAACATACAGCTCATTTCTG+TGG | + | chr8.3:1196881-1196900 | MS.gene042141:intron | 35.0% | |
| TAGCATCATTTCCACTGATA+CGG | - | chr8.3:1196503-1196522 | None:intergenic | 35.0% | |
| TATTACCTTACTCTTGACAC+AGG | + | chr8.3:1198911-1198930 | MS.gene042141:intron | 35.0% | |
| TCAAAAAGTTCCTGTCCTAA+TGG | - | chr8.3:1200172-1200191 | None:intergenic | 35.0% | |
| TCTTACCAAATACATCAGGT+TGG | - | chr8.3:1197910-1197929 | None:intergenic | 35.0% | |
| TCTTGCAAAACAGGTTCAAA+GGG | + | chr8.3:1200617-1200636 | MS.gene042141:intron | 35.0% | |
| TGAAGAAATTGTATGTGGAG+CGG | + | chr8.3:1198491-1198510 | MS.gene042141:CDS | 35.0% | |
| TGTCAAAATGGGCACAAATT+TGG | - | chr8.3:1198077-1198096 | None:intergenic | 35.0% | |
| TTGAATGAGCTGAAAAGTCA+AGG | - | chr8.3:1200118-1200137 | None:intergenic | 35.0% | |
| TTGCTAAGATGTGAATATCC+AGG | + | chr8.3:1198791-1198810 | MS.gene042141:CDS | 35.0% | |
| TTTATAGTATGCTCTTGTGG+CGG | + | chr8.3:1196971-1196990 | MS.gene042141:intron | 35.0% | |
| ! | CACGATTGACAACATTGTTT+TGG | + | chr8.3:1197192-1197211 | MS.gene042141:intron | 35.0% |
| ! | CCTATAAATGAAGGCTTTGT+TGG | + | chr8.3:1200145-1200164 | MS.gene042141:CDS | 35.0% |
| ! | CGTTTTATAGTATGCTCTTG+TGG | + | chr8.3:1196968-1196987 | MS.gene042141:intron | 35.0% |
| ! | CTCTTTCTTAGCATTTTTGC+AGG | + | chr8.3:1199975-1199994 | MS.gene042141:intron | 35.0% |
| ! | GATATCTAATTTTCCGATGC+TGG | + | chr8.3:1198219-1198238 | MS.gene042141:intron | 35.0% |
| ! | TATCCAGGTTAGTTATGTTG+TGG | + | chr8.3:1198806-1198825 | MS.gene042141:intron | 35.0% |
| ! | TGGGTTGAAGAAATTGTATG+TGG | + | chr8.3:1198486-1198505 | MS.gene042141:CDS | 35.0% |
| ! | TGGTACGCATTTTTACAGAT+TGG | - | chr8.3:1198176-1198195 | None:intergenic | 35.0% |
| ! | TTTTCAGCTCATTCAACGAT+AGG | + | chr8.3:1200122-1200141 | MS.gene042141:intron | 35.0% |
| !! | AGGACAGGAACTTTTTGAAA+AGG | + | chr8.3:1200174-1200193 | MS.gene042141:CDS | 35.0% |
| !! | ATGCTGAGTTTTAACATGGA+TGG | + | chr8.3:1196814-1196833 | MS.gene042141:intron | 35.0% |
| !! | ATTTCACTGGTGTTATATCG+TGG | + | chr8.3:1199433-1199452 | MS.gene042141:CDS | 35.0% |
| !! | CTTGGTTGTTGTTGTAGTTT+TGG | + | chr8.3:1199924-1199943 | MS.gene042141:intron | 35.0% |
| !! | TTGCTGTTTCAGTATTCCTT+AGG | - | chr8.3:1197447-1197466 | None:intergenic | 35.0% |
| AAAATCACTGTCGGTCTGAA+AGG | - | chr8.3:1198705-1198724 | None:intergenic | 40.0% | |
| AAAGTTGTCAGGCCACTAAA+AGG | - | chr8.3:1199204-1199223 | None:intergenic | 40.0% | |
| AAATCACTGTCGGTCTGAAA+GGG | - | chr8.3:1198704-1198723 | None:intergenic | 40.0% | |
| AATCGATAAGTGACCTCCAA+TGG | - | chr8.3:1198523-1198542 | None:intergenic | 40.0% | |
| AATGCCCAACCTGATGTATT+TGG | + | chr8.3:1197902-1197921 | MS.gene042141:CDS | 40.0% | |
| ACACCAAACACGTCATGATA+AGG | + | chr8.3:1197222-1197241 | MS.gene042141:intron | 40.0% | |
| ACATTGAAACGTACCAGCAA+TGG | + | chr8.3:1196349-1196368 | MS.gene042141:CDS | 40.0% | |
| ACGAACTACCAAAAGTTGTC+AGG | - | chr8.3:1199215-1199234 | None:intergenic | 40.0% | |
| ACTTCATGAACCACCTAAAG+AGG | + | chr8.3:1197524-1197543 | MS.gene042141:intron | 40.0% | |
| AGCTGCAGTATTACAGTACA+GGG | - | chr8.3:1199694-1199713 | None:intergenic | 40.0% | |
| ATCAAACTTCCAGTCATGGA+AGG | + | chr8.3:1197734-1197753 | MS.gene042141:CDS | 40.0% | |
| ATCATAGGTTTGGGCTATTG+CGG | + | chr8.3:1196710-1196729 | MS.gene042141:intron | 40.0% | |
| ATGATAAGGATGATGAAGGG+AGG | + | chr8.3:1197236-1197255 | MS.gene042141:intron | 40.0% | |
| ATGATCTCTAATGCCCCAAA+AGG | - | chr8.3:1199055-1199074 | None:intergenic | 40.0% | |
| ATTGCGGATACTAAGAGACA+AGG | + | chr8.3:1196726-1196745 | MS.gene042141:CDS | 40.0% | |
| CAACCACAACATAACTAACC+TGG | - | chr8.3:1198812-1198831 | None:intergenic | 40.0% | |
| CATCCTTATCATGACGTGTT+TGG | - | chr8.3:1197228-1197247 | None:intergenic | 40.0% | |
| CATGACAGCAACAAATCTGT+CGG | - | chr8.3:1198963-1198982 | None:intergenic | 40.0% | |
| CGAGTTTGTGAGGATCAAAT+AGG | - | chr8.3:1199488-1199507 | None:intergenic | 40.0% | |
| CGTCATGATAAGGATGATGA+AGG | + | chr8.3:1197232-1197251 | MS.gene042141:intron | 40.0% | |
| CTTCATGAACCACCTAAAGA+GGG | + | chr8.3:1197525-1197544 | MS.gene042141:intron | 40.0% | |
| CTTCTTGGTCAATATTCCAC+AGG | + | chr8.3:1198746-1198765 | MS.gene042141:CDS | 40.0% | |
| CTTGCAAATCGCAATTAAGC+TGG | + | chr8.3:1196648-1196667 | MS.gene042141:intron | 40.0% | |
| GAATGTTAGCAAGAAAGCCA+AGG | - | chr8.3:1198254-1198273 | None:intergenic | 40.0% | |
| GGTGGTTCATGAAGTTTACT+AGG | - | chr8.3:1197519-1197538 | None:intergenic | 40.0% | |
| GTTGCTCGACTATAAAAGCA+AGG | - | chr8.3:1198154-1198173 | None:intergenic | 40.0% | |
| TCAGTATTCCTTAGGTCTGT+TGG | - | chr8.3:1197439-1197458 | None:intergenic | 40.0% | |
| TGAATCAGATGATGTACGCA+AGG | + | chr8.3:1198283-1198302 | MS.gene042141:intron | 40.0% | |
| TGTATAAACCTGCTTGAGCT+GGG | - | chr8.3:1196559-1196578 | None:intergenic | 40.0% | |
| TGTGCTCATTCGAAGAAGAA+TGG | - | chr8.3:1196332-1196351 | None:intergenic | 40.0% | |
| TTACCTTACTCTTGACACAG+GGG | + | chr8.3:1198913-1198932 | MS.gene042141:intron | 40.0% | |
| TTGAACCTTAGTGAACACTG+TGG | - | chr8.3:1199098-1199117 | None:intergenic | 40.0% | |
| TTGTATAAACCTGCTTGAGC+TGG | - | chr8.3:1196560-1196579 | None:intergenic | 40.0% | |
| TTGTTCCACAGTGTTCACTA+AGG | + | chr8.3:1199090-1199109 | MS.gene042141:intron | 40.0% | |
| ! | TCCTCTCTGGAGAAAAACAA+AGG | + | chr8.3:1199394-1199413 | MS.gene042141:CDS | 40.0% |
| ! | TGACCAAGAAGCATGATCAT+TGG | - | chr8.3:1198737-1198756 | None:intergenic | 40.0% |
| ! | TGATTGATGGTAGATGGAGA+TGG | + | chr8.3:1196477-1196496 | MS.gene042141:intron | 40.0% |
| ! | TTTAGTGGCCTGACAACTTT+TGG | + | chr8.3:1199204-1199223 | MS.gene042141:CDS | 40.0% |
| ! | TTTGAAGCAACTGGTGGAAA+AGG | - | chr8.3:1198032-1198051 | None:intergenic | 40.0% |
| ! | TTTTCCGATGCTGGAATGAA+AGG | + | chr8.3:1198228-1198247 | MS.gene042141:intron | 40.0% |
| !! | AGAGTTTGTTACTGCAATGC+AGG | + | chr8.3:1196764-1196783 | MS.gene042141:CDS | 40.0% |
| !!! | ACAGATTTTGAAGCAACTGG+TGG | - | chr8.3:1198038-1198057 | None:intergenic | 40.0% |
| !!! | TCCTTTGTTTTTCTCCAGAG+AGG | - | chr8.3:1199398-1199417 | None:intergenic | 40.0% |
| AAGGCCTTTCATTCCAGCAT+CGG | - | chr8.3:1198235-1198254 | None:intergenic | 45.0% | |
| AATTGCCAACAGAGCAGAAG+TGG | - | chr8.3:1199303-1199322 | None:intergenic | 45.0% | |
| ATAACATTTGTGGACACCCC+TGG | + | chr8.3:1199369-1199388 | MS.gene042141:CDS | 45.0% | |
| ATGGAGATGCCTGCAATGAT+GGG | + | chr8.3:1200472-1200491 | MS.gene042141:CDS | 45.0% | |
| ATGTTGTCAATCGTGGCTAG+CGG | - | chr8.3:1197187-1197206 | None:intergenic | 45.0% | |
| ATTGATGTCACTGCACTGAG+AGG | - | chr8.3:1198460-1198479 | None:intergenic | 45.0% | |
| CAACAGAGCAGAAGTGGAAT+TGG | - | chr8.3:1199297-1199316 | None:intergenic | 45.0% | |
| CAAGCTGTAGATGACATGCT+TGG | + | chr8.3:1200744-1200763 | MS.gene042141:CDS | 45.0% | |
| CAATACTCTCCCTCTTTAGG+TGG | - | chr8.3:1197537-1197556 | None:intergenic | 45.0% | |
| CAATTCCACTTCTGCTCTGT+TGG | + | chr8.3:1199295-1199314 | MS.gene042141:intron | 45.0% | |
| CGAGTGATTTACTCTCTACG+CGG | + | chr8.3:1199528-1199547 | MS.gene042141:CDS | 45.0% | |
| CTGCAGCTCATGAGAGTTTA+TGG | + | chr8.3:1199706-1199725 | MS.gene042141:intron | 45.0% | |
| GACCAATACTCTCCCTCTTT+AGG | - | chr8.3:1197540-1197559 | None:intergenic | 45.0% | |
| GACGCATTAGTAGCTGTAAG+TGG | + | chr8.3:1197761-1197780 | MS.gene042141:intron | 45.0% | |
| GAGCTGCAGTATTACAGTAC+AGG | - | chr8.3:1199695-1199714 | None:intergenic | 45.0% | |
| GCAAAGCTAAGGTGCAACAA+AGG | + | chr8.3:1200494-1200513 | MS.gene042141:CDS | 45.0% | |
| GCGAAAACAATGTGAAGCAC+AGG | - | chr8.3:1200030-1200049 | None:intergenic | 45.0% | |
| GCTCGACTATAAAAGCAAGG+CGG | - | chr8.3:1198151-1198170 | None:intergenic | 45.0% | |
| GTATAAACCTGCTTGAGCTG+GGG | - | chr8.3:1196558-1196577 | None:intergenic | 45.0% | |
| GTCTGAAAGGGACAAATCAG+AGG | - | chr8.3:1198692-1198711 | None:intergenic | 45.0% | |
| TATAAACCTGCTTGAGCTGG+GGG | - | chr8.3:1196557-1196576 | None:intergenic | 45.0% | |
| TCACTGATGTCGAGTTTGTG+AGG | - | chr8.3:1199498-1199517 | None:intergenic | 45.0% | |
| TCGACAGCTACAGTATTTCC+AGG | - | chr8.3:1199171-1199190 | None:intergenic | 45.0% | |
| TGAAACAGCCAACAGACCTA+AGG | + | chr8.3:1197428-1197447 | MS.gene042141:intron | 45.0% | |
| TGTGGAGCGGTTAAAACCAT+TGG | + | chr8.3:1198504-1198523 | MS.gene042141:CDS | 45.0% | |
| TTGTCAAGTAGCGGCTATAG+TGG | + | chr8.3:1197115-1197134 | MS.gene042141:intron | 45.0% | |
| ! | ATTCCAAGAAAGGCGTGTGA+CGG | + | chr8.3:1200229-1200248 | MS.gene042141:CDS | 45.0% |
| ! | CACCTAAAGAGGGAGAGTAT+TGG | + | chr8.3:1197535-1197554 | MS.gene042141:intron | 45.0% |
| ! | GATGCTAGCATGCCTTTTAG+TGG | + | chr8.3:1199189-1199208 | MS.gene042141:CDS | 45.0% |
| ! | TGGTTCATCTTAGCCGATTC+AGG | + | chr8.3:1196369-1196388 | MS.gene042141:CDS | 45.0% |
| ! | TGTAGTCTGGAACTGATGAG+AGG | + | chr8.3:1199139-1199158 | MS.gene042141:intron | 45.0% |
| !! | CGACAGATTTGTTGCTGTCA+TGG | + | chr8.3:1198961-1198980 | MS.gene042141:CDS | 45.0% |
| !! | GAGTTTATGGAGCACTGATG+TGG | + | chr8.3:1199719-1199738 | MS.gene042141:CDS | 45.0% |
| !! | TGCAATGATGGGCAAAGCTA+AGG | + | chr8.3:1200483-1200502 | MS.gene042141:CDS | 45.0% |
| !! | TTAGCTTTGCCCATCATTGC+AGG | - | chr8.3:1200484-1200503 | None:intergenic | 45.0% |
| ACAGCTCATTTCTGTGGGAC+AGG | + | chr8.3:1196887-1196906 | MS.gene042141:intron | 50.0% | |
| AGCAACAAATCTGTCGGTCG+TGG | - | chr8.3:1198957-1198976 | None:intergenic | 50.0% | |
| CGGCTAAGATGAACCATTGC+TGG | - | chr8.3:1196365-1196384 | None:intergenic | 50.0% | |
| CTTTGTTGGCCCATTAGGAC+AGG | + | chr8.3:1200159-1200178 | MS.gene042141:CDS | 50.0% | |
| GATGCTGGAATGAAAGGCCT+TGG | + | chr8.3:1198234-1198253 | MS.gene042141:intron | 50.0% | |
| GATGGAGATGCCTGCAATGA+TGG | + | chr8.3:1200471-1200490 | MS.gene042141:CDS | 50.0% | |
| GCAACAAATCTGTCGGTCGT+GGG | - | chr8.3:1198956-1198975 | None:intergenic | 50.0% | |
| GGAGCGGTTAAAACCATTGG+AGG | + | chr8.3:1198507-1198526 | MS.gene042141:CDS | 50.0% | |
| TCGTGGCTAGCGGAAAATAG+TGG | - | chr8.3:1197177-1197196 | None:intergenic | 50.0% | |
| TTTCTCCAGAGAGGACACCA+GGG | - | chr8.3:1199389-1199408 | None:intergenic | 50.0% | |
| ! | CTTGACACAGGGGCACATAT+TGG | + | chr8.3:1198923-1198942 | MS.gene042141:intron | 50.0% |
| ! | TTTTCTCCAGAGAGGACACC+AGG | - | chr8.3:1199390-1199409 | None:intergenic | 50.0% |
| !! | ACTGATGAGAGGAGCATTCC+TGG | + | chr8.3:1199150-1199169 | MS.gene042141:CDS | 50.0% |
| !! | ACTTAGGTACTGGTCAGCCT+CGG | + | chr8.3:1198006-1198025 | MS.gene042141:intron | 50.0% |
| !! | GAAGGCTTTGTTGGCCCATT+AGG | + | chr8.3:1200154-1200173 | MS.gene042141:CDS | 50.0% |
| !! | GGAGCACTGATGTGGTCTTT+GGG | + | chr8.3:1199727-1199746 | MS.gene042141:CDS | 50.0% |
| !! | TGGAGCACTGATGTGGTCTT+TGG | + | chr8.3:1199726-1199745 | MS.gene042141:CDS | 50.0% |
| AGGGAGTTTCATCTGCCAGC+TGG | + | chr8.3:1200636-1200655 | MS.gene042141:CDS | 55.0% | |
| CTCATTTCTGTGGGACAGGC+GGG | + | chr8.3:1196891-1196910 | MS.gene042141:CDS | 55.0% | |
| GATGGAGATGGCCGTATCAG+TGG | + | chr8.3:1196489-1196508 | MS.gene042141:intron | 55.0% | |
| GCTCATTTCTGTGGGACAGG+CGG | + | chr8.3:1196890-1196909 | MS.gene042141:intron | 55.0% | |
| GTGCCCCTGTGTCAAGAGTA+AGG | - | chr8.3:1198919-1198938 | None:intergenic | 55.0% | |
| TCATTTCTGTGGGACAGGCG+GGG | + | chr8.3:1196892-1196911 | MS.gene042141:CDS | 55.0% | |
| TTCTCCAGAGAGGACACCAG+GGG | - | chr8.3:1199388-1199407 | None:intergenic | 55.0% | |
| ! | AAGAAAGGCGTGTGACGGTC+GGG | + | chr8.3:1200234-1200253 | MS.gene042141:CDS | 55.0% |
| ! | CAAGAAAGGCGTGTGACGGT+CGG | + | chr8.3:1200233-1200252 | MS.gene042141:CDS | 55.0% |
| !! | GCGTCGATTCCTTCCATGAC+TGG | - | chr8.3:1197746-1197765 | None:intergenic | 55.0% |
| AATCTGTCGGTCGTGGGCTC+TGG | - | chr8.3:1198950-1198969 | None:intergenic | 60.0% | |
| CGACCGTCACACGCCTTTCT+TGG | - | chr8.3:1200235-1200254 | None:intergenic | 60.0% | |
| GCAACTGGTGGAAAAGGCCG+AGG | - | chr8.3:1198026-1198045 | None:intergenic | 60.0% | |
| GACACCCCTGGTGTCCTCTC+TGG | + | chr8.3:1199381-1199400 | MS.gene042141:CDS | 65.0% | |
| GAGCTGGGGGCGAGACAAGT+TGG | - | chr8.3:1196544-1196563 | None:intergenic | 65.0% | |
| GTCTCGCCCCCAGCTCAAGC+AGG | + | chr8.3:1196548-1196567 | MS.gene042141:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 1196306 | 1200815 | 1196306 | ID=MS.gene042141 |
| chr8.3 | mRNA | 1196306 | 1200815 | 1196306 | ID=MS.gene042141.t1;Parent=MS.gene042141 |
| chr8.3 | exon | 1196306 | 1196390 | 1196306 | ID=MS.gene042141.t1.exon1;Parent=MS.gene042141.t1 |
| chr8.3 | CDS | 1196306 | 1196390 | 1196306 | ID=cds.MS.gene042141.t1;Parent=MS.gene042141.t1 |
| chr8.3 | exon | 1196490 | 1196569 | 1196490 | ID=MS.gene042141.t1.exon2;Parent=MS.gene042141.t1 |
| chr8.3 | CDS | 1196490 | 1196569 | 1196490 | ID=cds.MS.gene042141.t1;Parent=MS.gene042141.t1 |
| chr8.3 | exon | 1196717 | 1196785 | 1196717 | ID=MS.gene042141.t1.exon3;Parent=MS.gene042141.t1 |
| chr8.3 | CDS | 1196717 | 1196785 | 1196717 | ID=cds.MS.gene042141.t1;Parent=MS.gene042141.t1 |
| chr8.3 | exon | 1196891 | 1196948 | 1196891 | ID=MS.gene042141.t1.exon4;Parent=MS.gene042141.t1 |
| chr8.3 | CDS | 1196891 | 1196948 | 1196891 | ID=cds.MS.gene042141.t1;Parent=MS.gene042141.t1 |
| chr8.3 | exon | 1197720 | 1197775 | 1197720 | ID=MS.gene042141.t1.exon5;Parent=MS.gene042141.t1 |
| chr8.3 | CDS | 1197720 | 1197775 | 1197720 | ID=cds.MS.gene042141.t1;Parent=MS.gene042141.t1 |
| chr8.3 | exon | 1197881 | 1197923 | 1197881 | ID=MS.gene042141.t1.exon6;Parent=MS.gene042141.t1 |
| chr8.3 | CDS | 1197881 | 1197923 | 1197881 | ID=cds.MS.gene042141.t1;Parent=MS.gene042141.t1 |
| chr8.3 | exon | 1198012 | 1198064 | 1198012 | ID=MS.gene042141.t1.exon7;Parent=MS.gene042141.t1 |
| chr8.3 | CDS | 1198012 | 1198064 | 1198012 | ID=cds.MS.gene042141.t1;Parent=MS.gene042141.t1 |
| chr8.3 | exon | 1198454 | 1198567 | 1198454 | ID=MS.gene042141.t1.exon8;Parent=MS.gene042141.t1 |
| chr8.3 | CDS | 1198454 | 1198567 | 1198454 | ID=cds.MS.gene042141.t1;Parent=MS.gene042141.t1 |
| chr8.3 | exon | 1198710 | 1198812 | 1198710 | ID=MS.gene042141.t1.exon9;Parent=MS.gene042141.t1 |
| chr8.3 | CDS | 1198710 | 1198812 | 1198710 | ID=cds.MS.gene042141.t1;Parent=MS.gene042141.t1 |
| chr8.3 | exon | 1198933 | 1198982 | 1198933 | ID=MS.gene042141.t1.exon10;Parent=MS.gene042141.t1 |
| chr8.3 | CDS | 1198933 | 1198982 | 1198933 | ID=cds.MS.gene042141.t1;Parent=MS.gene042141.t1 |
| chr8.3 | exon | 1199144 | 1199272 | 1199144 | ID=MS.gene042141.t1.exon11;Parent=MS.gene042141.t1 |
| chr8.3 | CDS | 1199144 | 1199272 | 1199144 | ID=cds.MS.gene042141.t1;Parent=MS.gene042141.t1 |
| chr8.3 | exon | 1199357 | 1199608 | 1199357 | ID=MS.gene042141.t1.exon12;Parent=MS.gene042141.t1 |
| chr8.3 | CDS | 1199357 | 1199608 | 1199357 | ID=cds.MS.gene042141.t1;Parent=MS.gene042141.t1 |
| chr8.3 | exon | 1199712 | 1199791 | 1199712 | ID=MS.gene042141.t1.exon13;Parent=MS.gene042141.t1 |
| chr8.3 | CDS | 1199712 | 1199791 | 1199712 | ID=cds.MS.gene042141.t1;Parent=MS.gene042141.t1 |
| chr8.3 | exon | 1200129 | 1200255 | 1200129 | ID=MS.gene042141.t1.exon14;Parent=MS.gene042141.t1 |
| chr8.3 | CDS | 1200129 | 1200255 | 1200129 | ID=cds.MS.gene042141.t1;Parent=MS.gene042141.t1 |
| chr8.3 | exon | 1200406 | 1200549 | 1200406 | ID=MS.gene042141.t1.exon15;Parent=MS.gene042141.t1 |
| chr8.3 | CDS | 1200406 | 1200549 | 1200406 | ID=cds.MS.gene042141.t1;Parent=MS.gene042141.t1 |
| chr8.3 | exon | 1200630 | 1200815 | 1200630 | ID=MS.gene042141.t1.exon16;Parent=MS.gene042141.t1 |
| chr8.3 | CDS | 1200630 | 1200815 | 1200630 | ID=cds.MS.gene042141.t1;Parent=MS.gene042141.t1 |
| Gene Sequence |
| Protein sequence |
