AlfalfaGEDB | MS.gene042279

M. sativa cultivar XinJiangDaYe / MS.gene042279

KEGG: -
GO: GO:0000166 GO:0003674 GO:0003824 GO:0005215 GO:0005488 GO:0005524 GO:0008144 GO:0008150 GO:0009987 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017004 GO:0017076 GO:0017111 GO:0022607 GO:0022857 GO:0030554 GO:0032553 GO:0032555 GO:0032559 GO:0034622 GO:0035639 GO:0036094 GO:0043167 GO:0043168 GO:0043933 GO:0065003 GO:0071840 GO:0097159 GO:0097367 GO:1901265 GO:1901363
PFAM: PF00005.30

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene042279.t1	XP_003610365.1	99.1	229	2	0	1	229	1	229	9.20E-123	449.5

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene042279.t1	Q9C8T1	83.4	229	38	0	1	229	1	229	8.2e-104	377.9

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene042279.t1	G7JHX5	99.1	229	2	0	1	229	1	229	6.7e-123	449.5

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene042279	MS.gene022937	PPI
MS.gene042279	MS.gene029856	PPI
MS.gene042279	MS.gene97486	PPI
MS.gene042279	MS.gene071145	PPI
MS.gene042279	MS.gene97484	PPI
MS.gene042279	MS.gene071146	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene042279.t1	MTR_4g131330	99.127	229	2	0	1	229	1	229	1.80e-168	463
MS.gene042279.t1	MTR_1567s0010	33.143	175	108	4	28	196	245	416	3.12e-19	85.9
MS.gene042279.t1	MTR_4g124050	29.592	196	111	4	20	197	1062	1248	6.03e-17	79.7
MS.gene042279.t1	MTR_4g124050	26.455	189	115	2	25	197	413	593	2.93e-12	65.9
MS.gene042279.t1	MTR_4g077930	30.233	172	95	2	24	178	941	1104	1.80e-15	75.5
MS.gene042279.t1	MTR_4g077930	30.233	172	95	2	24	178	1050	1213	1.98e-15	75.5
MS.gene042279.t1	MTR_3g107800	28.205	195	115	2	20	197	1038	1224	1.65e-14	72.8
MS.gene042279.t1	MTR_3g107800	27.835	194	116	3	20	197	408	593	1.26e-13	70.1
MS.gene042279.t1	MTR_1g086095	28.488	172	98	2	24	178	272	435	2.93e-14	71.6
MS.gene042279.t1	MTR_4g124000	27.907	172	99	2	24	178	1052	1215	6.06e-14	70.9
MS.gene042279.t1	MTR_4g124000	29.412	170	96	3	25	178	395	556	3.01e-13	68.9
MS.gene042279.t1	MTR_1g086150	28.488	172	98	2	24	178	1055	1218	6.52e-14	70.9
MS.gene042279.t1	MTR_6g465300	29.082	196	112	6	19	196	482	668	6.66e-14	70.9
MS.gene042279.t1	MTR_6g465300	29.082	196	112	6	19	196	482	668	7.26e-14	70.5
MS.gene042279.t1	MTR_1g086080	28.488	172	98	2	24	178	1060	1223	7.60e-14	70.9
MS.gene042279.t1	MTR_1g086080	27.647	170	99	3	25	178	406	567	7.02e-11	62.0
MS.gene042279.t1	MTR_4g124000	28.042	189	112	3	25	197	395	575	1.64e-13	69.7
MS.gene042279.t1	MTR_4g123990	29.412	170	96	3	25	178	395	556	2.87e-13	68.9
MS.gene042279.t1	MTR_4g123990	26.744	172	101	2	24	178	1052	1215	6.69e-13	67.8
MS.gene042279.t1	MTR_1g063170	28.655	171	98	2	24	178	415	577	2.93e-13	68.9
MS.gene042279.t1	MTR_2g018320	27.895	190	113	3	24	197	375	556	7.40e-13	67.8
MS.gene042279.t1	MTR_4g124040	27.907	172	99	3	24	178	1105	1268	1.67e-12	66.6
MS.gene042279.t1	MTR_4g124040	28.235	170	98	3	25	178	445	606	1.96e-12	66.6
MS.gene042279.t1	MTR_4g124040	27.907	172	99	3	24	178	873	1036	1.69e-12	66.6
MS.gene042279.t1	MTR_4g124040	28.235	170	98	3	25	178	213	374	2.02e-12	66.6
MS.gene042279.t1	MTR_4g124040	27.907	172	99	3	24	178	1050	1213	2.07e-12	66.6
MS.gene042279.t1	MTR_4g124040	28.235	170	98	3	25	178	390	551	2.27e-12	66.2
MS.gene042279.t1	MTR_4g124050	26.455	189	115	2	25	197	413	593	2.85e-12	65.9
MS.gene042279.t1	MTR_2g018530	28.070	171	99	3	24	178	385	547	3.59e-12	65.9
MS.gene042279.t1	MTR_7g102070	27.647	170	99	3	25	178	443	604	5.73e-12	65.1
MS.gene042279.t1	MTR_6g078080	28.409	176	98	4	24	183	381	544	5.96e-12	65.1
MS.gene042279.t1	MTR_4g081190	29.082	196	111	3	20	197	355	540	1.62e-11	63.9
MS.gene042279.t1	MTR_3g080220	28.488	172	98	2	24	178	1069	1232	2.35e-11	63.5
MS.gene042279.t1	MTR_2g018350	25.773	194	120	3	20	197	371	556	2.80e-11	63.2
MS.gene042279.t1	MTR_2g018350	25.131	191	118	2	24	197	1032	1214	9.09e-11	61.6
MS.gene042279.t1	MTR_0019s0020	31.915	188	99	8	21	196	583	753	4.17e-11	62.8
MS.gene042279.t1	MTR_4g077930	26.455	189	115	3	25	197	393	573	4.50e-11	62.4
MS.gene042279.t1	MTR_0019s0020	31.915	188	99	8	21	196	583	753	4.97e-11	62.4
MS.gene042279.t1	MTR_0019s0020	31.915	188	99	8	21	196	583	753	5.40e-11	62.4
MS.gene042279.t1	MTR_0019s0020	31.915	188	99	8	21	196	583	753	8.20e-11	61.6
MS.gene042279.t1	MTR_0019s0020	31.915	188	99	8	21	196	583	753	8.23e-11	61.6

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene042279.t1	AT1G63270	83.406	229	38	0	1	229	1	229	5.17e-140	391
MS.gene042279.t1	AT1G67940	29.534	193	123	4	9	193	27	214	8.08e-15	72.0
MS.gene042279.t1	AT3G62150	28.431	204	119	4	13	197	405	600	2.80e-14	72.0
MS.gene042279.t1	AT3G62150	27.273	176	103	2	20	178	1064	1231	1.66e-13	69.7
MS.gene042279.t1	AT3G62150	28.431	204	119	4	13	197	405	600	2.80e-14	72.0
MS.gene042279.t1	AT3G62150	27.273	176	103	2	20	178	1064	1231	1.66e-13	69.7
MS.gene042279.t1	AT3G62150	28.431	204	119	4	13	197	405	600	2.80e-14	72.0
MS.gene042279.t1	AT3G62150	27.273	176	103	2	20	178	1064	1231	1.66e-13	69.7
MS.gene042279.t1	AT1G02530	28.652	178	100	3	20	178	1039	1208	1.02e-13	70.5
MS.gene042279.t1	AT1G02530	26.804	194	118	3	20	197	380	565	1.47e-13	70.1
MS.gene042279.t1	AT1G02530	26.804	194	118	3	20	197	380	565	1.41e-13	70.1
MS.gene042279.t1	AT4G18050	27.895	190	113	3	24	197	371	552	1.78e-13	69.7
MS.gene042279.t1	AT4G18050	25.989	177	106	2	19	178	1004	1172	4.62e-11	62.4
MS.gene042279.t1	AT4G18050	27.895	190	113	3	24	197	381	562	2.03e-13	69.3
MS.gene042279.t1	AT4G18050	25.989	177	106	2	19	178	1014	1182	5.18e-11	62.4
MS.gene042279.t1	AT5G46540	28.070	171	99	3	24	178	373	535	4.88e-13	68.6
MS.gene042279.t1	AT5G46540	26.923	208	126	3	19	209	1016	1214	5.22e-13	68.2
MS.gene042279.t1	AT2G47000	28.655	171	98	3	24	178	400	562	7.20e-13	67.8
MS.gene042279.t1	AT2G47000	28.655	171	98	3	24	178	400	562	7.21e-13	67.8
MS.gene042279.t1	AT2G47000	26.744	172	101	2	24	178	1058	1221	3.09e-12	65.9
MS.gene042279.t1	AT2G47000	28.655	171	98	3	24	178	400	562	7.21e-13	67.8
MS.gene042279.t1	AT2G47000	26.744	172	101	2	24	178	1058	1221	3.09e-12	65.9
MS.gene042279.t1	AT2G47000	28.655	171	98	3	24	178	400	562	7.21e-13	67.8
MS.gene042279.t1	AT2G47000	26.744	172	101	2	24	178	1058	1221	3.09e-12	65.9
MS.gene042279.t1	AT2G47000	28.655	171	98	3	24	178	400	562	8.07e-13	67.8
MS.gene042279.t1	AT2G47000	28.655	171	98	3	24	178	400	562	8.07e-13	67.8
MS.gene042279.t1	AT2G47000	28.655	171	98	3	24	178	400	562	8.44e-13	67.8
MS.gene042279.t1	AT1G28010	25.926	189	116	3	25	197	389	569	1.45e-12	67.0
MS.gene042279.t1	AT4G01830	28.571	175	101	3	20	178	131	297	1.47e-12	67.0
MS.gene042279.t1	AT4G01830	28.324	173	98	3	24	178	767	931	4.87e-11	62.4
MS.gene042279.t1	AT4G01830	28.571	175	101	3	20	178	365	531	1.70e-12	66.6
MS.gene042279.t1	AT4G01830	28.324	173	98	3	24	178	1001	1165	6.12e-11	62.0
MS.gene042279.t1	AT1G02520	28.070	171	99	3	24	178	397	559	2.20e-12	66.6
MS.gene042279.t1	AT1G02520	27.011	174	100	2	24	178	1048	1213	8.21e-12	64.7
MS.gene042279.t1	AT1G02520	28.070	171	99	3	24	178	397	559	2.20e-12	66.6
MS.gene042279.t1	AT1G02520	27.011	174	100	2	24	178	1048	1213	8.21e-12	64.7
MS.gene042279.t1	AT1G02520	28.070	171	99	3	24	178	397	559	2.20e-12	66.6
MS.gene042279.t1	AT1G02520	27.011	174	100	2	24	178	1048	1213	8.21e-12	64.7
MS.gene042279.t1	AT1G27940	28.804	184	117	5	25	197	174	354	4.20e-12	65.5
MS.gene042279.t1	AT1G27940	28.042	189	112	3	25	197	807	987	7.39e-11	62.0
MS.gene042279.t1	AT1G27940	28.649	185	118	5	25	198	388	569	5.67e-12	65.1
MS.gene042279.t1	AT1G27940	27.895	190	113	3	25	198	1021	1202	9.33e-11	61.6
MS.gene042279.t1	AT4G01820	27.684	177	100	3	20	178	360	526	1.21e-11	64.3
MS.gene042279.t1	AT4G01820	27.684	177	100	3	20	178	360	526	1.34e-11	64.3
MS.gene042279.t1	AT2G36910	27.485	171	100	2	24	178	384	546	1.58e-11	63.9
MS.gene042279.t1	AT3G28380	28.000	175	102	3	20	178	371	537	3.43e-11	62.8
MS.gene042279.t1	AT3G28860	27.513	189	110	4	25	196	1027	1205	4.67e-11	62.4

Find 66 sgRNAs with CRISPR-Local

Find 70 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AGTATAAGCTTCAGCTTAAC+TGG	0.248424	8.2:-3711700	MS.gene042279:CDS
ACTTTCATGCGCATGTTAGC+TGG	0.296912	8.2:-3711794	MS.gene042279:CDS
TGGCCCATTGAAAGCATCTT+AGG	0.319230	8.2:+3711539	None:intergenic
TAATGAGAAGTCTACTGTTC+TGG	0.350793	8.2:-3711657	MS.gene042279:CDS
TATTGCAGAACACAGGAAAC+AGG	0.372464	8.2:-3711405	MS.gene042279:CDS
TAAGCTTGCACTTGAGTTGA+TGG	0.405805	8.2:-3711588	MS.gene042279:CDS
CGTCTGCAGGAGAAATCCTT+TGG	0.429605	8.2:-3711760	MS.gene042279:CDS
CTTGTGCTAACAGGTGCAAA+TGG	0.445397	8.2:-3711830	MS.gene042279:CDS
TGCACTTGAGTTGATGGGAC+TGG	0.458658	8.2:-3711582	MS.gene042279:CDS
GGCTCGTCTAGCAACCATAT+GGG	0.461520	8.2:+3711473	None:intergenic
CATGGAATCTTCTATCTCAA+TGG	0.462552	8.2:+3711352	None:intergenic
GCACTTGAGTTGATGGGACT+GGG	0.464272	8.2:-3711581	MS.gene042279:CDS
GGAGGGGCACTTGTGCTAAC+AGG	0.470048	8.2:-3711839	MS.gene042279:CDS
GCGATCAATTGCGAGCAATC+TGG	0.470226	8.2:+3711496	None:intergenic
ATCCTCCTTGGAAACCTTGG+TGG	0.473105	8.2:+3711317	None:intergenic
TCTATAAGTGTCATCCTCCT+TGG	0.473498	8.2:+3711305	None:intergenic
TCGCAATTGATCGCCCCATA+TGG	0.474072	8.2:-3711487	MS.gene042279:CDS
AGCTAACATGCGCATGAAAG+TGG	0.475025	8.2:+3711796	None:intergenic
AGGCTCGTCTAGCAACCATA+TGG	0.475048	8.2:+3711472	None:intergenic
CTTTCATGCGCATGTTAGCT+GGG	0.479202	8.2:-3711793	MS.gene042279:CDS
CACTTATAGATATGCTTGAC+CGG	0.480974	8.2:-3711292	MS.gene042279:CDS
ATGGAATCTTCTATCTCAAT+GGG	0.487729	8.2:+3711353	None:intergenic
GTTGATGGGACTGGGAAGAT+TGG	0.488958	8.2:-3711573	MS.gene042279:CDS
AAAGCCTAAGATGCTTTCAA+TGG	0.493892	8.2:-3711543	MS.gene042279:CDS
TCATGCAAGAGACATTGTTA+AGG	0.501277	8.2:+3711909	None:intergenic
GTCATCCTCCTTGGAAACCT+TGG	0.511121	8.2:+3711314	None:intergenic
TGCTCTTGAGGCTGCCACCA+AGG	0.526833	8.2:-3711331	MS.gene042279:CDS
GGCTGCCACCAAGGTTTCCA+AGG	0.535052	8.2:-3711322	MS.gene042279:CDS
GAATGTCATGGCCATTCCAA+AGG	0.538492	8.2:+3711744	None:intergenic
AATGTCTCTCTTCATGATGG+AGG	0.538799	8.2:-3711857	MS.gene042279:CDS
AAGCCTAAGATGCTTTCAAT+GGG	0.539281	8.2:-3711542	MS.gene042279:CDS
TCAGTTGCATTAGATGATGA+AGG	0.540951	8.2:-3711449	MS.gene042279:CDS
GCTAACAGGTGCAAATGGCT+CGG	0.541340	8.2:-3711825	MS.gene042279:CDS
CTAACAGGTGCAAATGGCTC+GGG	0.543916	8.2:-3711824	MS.gene042279:CDS
ACATTGTTAAGGAGGAGACG+AGG	0.550534	8.2:+3711920	None:intergenic
TAAGCTGAAGCTTATACTGA+TGG	0.554659	8.2:+3711705	None:intergenic
AAGCTTGCACTTGAGTTGAT+GGG	0.556728	8.2:-3711587	MS.gene042279:CDS
ATGTCTCTCTTCATGATGGA+GGG	0.559238	8.2:-3711856	MS.gene042279:CDS
AACTGGGTCTGCCTCAAGCA+TGG	0.564032	8.2:-3711683	MS.gene042279:CDS
ACAGGGAGGAATTGTGATTG+TGG	0.566283	8.2:-3711387	MS.gene042279:CDS
TGGTGGCAGCCTCAAGAGCA+TGG	0.568725	8.2:+3711334	None:intergenic
TCTCATTAATTCCATGCTTG+AGG	0.569583	8.2:+3711672	None:intergenic
TGTCTCTCTTCATGATGGAG+GGG	0.571601	8.2:-3711855	MS.gene042279:CDS
TCTTGATTACAAACGAGGGA+AGG	0.572184	8.2:-3711612	MS.gene042279:CDS
GTGAATGTCTCTCTTCATGA+TGG	0.575226	8.2:-3711860	MS.gene042279:CDS
TAGAAGATTCCATGCTCTTG+AGG	0.587588	8.2:-3711343	MS.gene042279:CDS
AAAGTTAACTAATATCTGCC+CGG	0.588067	8.2:+3711273	None:intergenic
CACATTAGACAGAACTTGCG+AGG	0.590033	8.2:+3711880	None:intergenic
GCAGGAGAAATCCTTTGGAA+TGG	0.592243	8.2:-3711755	MS.gene042279:CDS
TGCAAGAGACATTGTTAAGG+AGG	0.593226	8.2:+3711912	None:intergenic
GGGACTGGGAAGATTGGCTA+AGG	0.595370	8.2:-3711567	MS.gene042279:CDS
CAAAGGATTTCTCCTGCAGA+CGG	0.597971	8.2:+3711761	None:intergenic
CATTGTTAAGGAGGAGACGA+GGG	0.610651	8.2:+3711921	None:intergenic
GTATAAGCTTCAGCTTAACT+GGG	0.615494	8.2:-3711699	MS.gene042279:CDS
TCATCATCTAATGCAACTGA+AGG	0.627900	8.2:+3711452	None:intergenic
AACTTCTTGATTACAAACGA+GGG	0.639263	8.2:-3711616	MS.gene042279:CDS
GCTCGTCTAGCAACCATATG+GGG	0.642137	8.2:+3711474	None:intergenic
GAACTTCTTGATTACAAACG+AGG	0.642628	8.2:-3711617	MS.gene042279:CDS
ACTTATAGATATGCTTGACC+GGG	0.653298	8.2:-3711291	MS.gene042279:CDS
ATTGCAGAACACAGGAAACA+GGG	0.655611	8.2:-3711404	MS.gene042279:CDS
AGTACATTATTGCAGAACAC+AGG	0.673742	8.2:-3711412	MS.gene042279:CDS
ATTGTTAAGGAGGAGACGAG+GGG	0.674115	8.2:+3711922	None:intergenic
AGATGCTTTCAATGGGCCAG+CGG	0.680942	8.2:-3711535	MS.gene042279:CDS
TGCCACCAAGGTTTCCAAGG+AGG	0.687258	8.2:-3711319	MS.gene042279:CDS
TTGTTAAGGAGGAGACGAGG+GGG	0.688535	8.2:+3711923	None:intergenic
GCAGAACACAGGAAACAGGG+AGG	0.788797	8.2:-3711401	MS.gene042279:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TTGTAGATTTTTGAATGTCA+TGG	+	chr8.2:3711492-3711511	None:intergenic	25.0%
	AACTTCTTGATTACAAACGA+GGG	-	chr8.2:3711605-3711624	MS.gene042279:CDS	30.0%
	ATGGAATCTTCTATCTCAAT+GGG	+	chr8.2:3711871-3711890	None:intergenic	30.0%
	AAAGCCTAAGATGCTTTCAA+TGG	-	chr8.2:3711678-3711697	MS.gene042279:CDS	35.0%
	AAGCCTAAGATGCTTTCAAT+GGG	-	chr8.2:3711679-3711698	MS.gene042279:CDS	35.0%
	ACTTATAGATATGCTTGACC+GGG	-	chr8.2:3711930-3711949	MS.gene042279:CDS	35.0%
	AGTACATTATTGCAGAACAC+AGG	-	chr8.2:3711809-3711828	MS.gene042279:CDS	35.0%
	AGTATAAGCTTCAGCTTAAC+TGG	-	chr8.2:3711521-3711540	MS.gene042279:CDS	35.0%
	CACTTATAGATATGCTTGAC+CGG	-	chr8.2:3711929-3711948	MS.gene042279:CDS	35.0%
	CATGGAATCTTCTATCTCAA+TGG	+	chr8.2:3711872-3711891	None:intergenic	35.0%
	GAACTTCTTGATTACAAACG+AGG	-	chr8.2:3711604-3711623	MS.gene042279:CDS	35.0%
	GTATAAGCTTCAGCTTAACT+GGG	-	chr8.2:3711522-3711541	MS.gene042279:CDS	35.0%
	TAAGCTGAAGCTTATACTGA+TGG	+	chr8.2:3711519-3711538	None:intergenic	35.0%
	TAATGAGAAGTCTACTGTTC+TGG	-	chr8.2:3711564-3711583	MS.gene042279:CDS	35.0%
	TCAGTTGCATTAGATGATGA+AGG	-	chr8.2:3711772-3711791	MS.gene042279:CDS	35.0%
	TCATCATCTAATGCAACTGA+AGG	+	chr8.2:3711772-3711791	None:intergenic	35.0%
	TCATGCAAGAGACATTGTTA+AGG	+	chr8.2:3711315-3711334	None:intergenic	35.0%
	TCTCATTAATTCCATGCTTG+AGG	+	chr8.2:3711552-3711571	None:intergenic	35.0%
	AATGTCTCTCTTCATGATGG+AGG	-	chr8.2:3711364-3711383	MS.gene042279:CDS	40.0%
	ATTGCAGAACACAGGAAACA+GGG	-	chr8.2:3711817-3711836	MS.gene042279:CDS	40.0%
	GTGAATGTCTCTCTTCATGA+TGG	-	chr8.2:3711361-3711380	MS.gene042279:CDS	40.0%
	TAGAAGATTCCATGCTCTTG+AGG	-	chr8.2:3711878-3711897	MS.gene042279:CDS	40.0%
	TATTGCAGAACACAGGAAAC+AGG	-	chr8.2:3711816-3711835	MS.gene042279:CDS	40.0%
	TCTATAAGTGTCATCCTCCT+TGG	+	chr8.2:3711919-3711938	None:intergenic	40.0%
	TCTTGATTACAAACGAGGGA+AGG	-	chr8.2:3711609-3711628	MS.gene042279:CDS	40.0%
	TGCAAGAGACATTGTTAAGG+AGG	+	chr8.2:3711312-3711331	None:intergenic	40.0%
!	ATGTCTCTCTTCATGATGGA+GGG	-	chr8.2:3711365-3711384	MS.gene042279:CDS	40.0%
!!	AAGCTTGCACTTGAGTTGAT+GGG	-	chr8.2:3711634-3711653	MS.gene042279:CDS	40.0%
!!	TAAGCTTGCACTTGAGTTGA+TGG	-	chr8.2:3711633-3711652	MS.gene042279:CDS	40.0%
	ACAGGGAGGAATTGTGATTG+TGG	-	chr8.2:3711834-3711853	MS.gene042279:CDS	45.0%
	ACATTGTTAAGGAGGAGACG+AGG	+	chr8.2:3711304-3711323	None:intergenic	45.0%
	ACTTTCATGCGCATGTTAGC+TGG	-	chr8.2:3711427-3711446	MS.gene042279:CDS	45.0%
	AGCTAACATGCGCATGAAAG+TGG	+	chr8.2:3711428-3711447	None:intergenic	45.0%
	ATTGTTAAGGAGGAGACGAG+GGG	+	chr8.2:3711302-3711321	None:intergenic	45.0%
	CAAAGGATTTCTCCTGCAGA+CGG	+	chr8.2:3711463-3711482	None:intergenic	45.0%
	CACATTAGACAGAACTTGCG+AGG	+	chr8.2:3711344-3711363	None:intergenic	45.0%
	CATTGTTAAGGAGGAGACGA+GGG	+	chr8.2:3711303-3711322	None:intergenic	45.0%
	CTTGTGCTAACAGGTGCAAA+TGG	-	chr8.2:3711391-3711410	MS.gene042279:CDS	45.0%
	CTTTCATGCGCATGTTAGCT+GGG	-	chr8.2:3711428-3711447	MS.gene042279:CDS	45.0%
	GAATGTCATGGCCATTCCAA+AGG	+	chr8.2:3711480-3711499	None:intergenic	45.0%
!	CAAGTTGCAATCTTTTCCGC+TGG	+	chr8.2:3711705-3711724	None:intergenic	45.0%
!	GCAGGAGAAATCCTTTGGAA+TGG	-	chr8.2:3711466-3711485	MS.gene042279:CDS	45.0%
!	TGTCTCTCTTCATGATGGAG+GGG	-	chr8.2:3711366-3711385	MS.gene042279:CDS	45.0%
!!	TGGCCCATTGAAAGCATCTT+AGG	+	chr8.2:3711685-3711704	None:intergenic	45.0%
	AGATGCTTTCAATGGGCCAG+CGG	-	chr8.2:3711686-3711705	MS.gene042279:CDS	50.0%
	AGGCTCGTCTAGCAACCATA+TGG	+	chr8.2:3711752-3711771	None:intergenic	50.0%
	ATCCTCCTTGGAAACCTTGG+TGG	+	chr8.2:3711907-3711926	None:intergenic	50.0%
	CGTCTGCAGGAGAAATCCTT+TGG	-	chr8.2:3711461-3711480	MS.gene042279:CDS	50.0%
	CTAACAGGTGCAAATGGCTC+GGG	-	chr8.2:3711397-3711416	MS.gene042279:CDS	50.0%
	GCGATCAATTGCGAGCAATC+TGG	+	chr8.2:3711728-3711747	None:intergenic	50.0%
	GCTAACAGGTGCAAATGGCT+CGG	-	chr8.2:3711396-3711415	MS.gene042279:CDS	50.0%
	GCTCGTCTAGCAACCATATG+GGG	+	chr8.2:3711750-3711769	None:intergenic	50.0%
	GGCTCGTCTAGCAACCATAT+GGG	+	chr8.2:3711751-3711770	None:intergenic	50.0%
	GTCATCCTCCTTGGAAACCT+TGG	+	chr8.2:3711910-3711929	None:intergenic	50.0%
	TCGCAATTGATCGCCCCATA+TGG	-	chr8.2:3711734-3711753	MS.gene042279:CDS	50.0%
	TTGTTAAGGAGGAGACGAGG+GGG	+	chr8.2:3711301-3711320	None:intergenic	50.0%
!	GTTGATGGGACTGGGAAGAT+TGG	-	chr8.2:3711648-3711667	MS.gene042279:CDS	50.0%
!!	GCACTTGAGTTGATGGGACT+GGG	-	chr8.2:3711640-3711659	MS.gene042279:CDS	50.0%
!!	TGCACTTGAGTTGATGGGAC+TGG	-	chr8.2:3711639-3711658	MS.gene042279:CDS	50.0%
	AACTGGGTCTGCCTCAAGCA+TGG	-	chr8.2:3711538-3711557	MS.gene042279:CDS	55.0%
	GCAGAACACAGGAAACAGGG+AGG	-	chr8.2:3711820-3711839	MS.gene042279:CDS	55.0%
	TGCCACCAAGGTTTCCAAGG+AGG	-	chr8.2:3711902-3711921	MS.gene042279:CDS	55.0%
!	GGGACTGGGAAGATTGGCTA+AGG	-	chr8.2:3711654-3711673	MS.gene042279:CDS	55.0%
	GGCTGCCACCAAGGTTTCCA+AGG	-	chr8.2:3711899-3711918	MS.gene042279:CDS	60.0%
	TGCTCTTGAGGCTGCCACCA+AGG	-	chr8.2:3711890-3711909	MS.gene042279:CDS	60.0%
	TGGTGGCAGCCTCAAGAGCA+TGG	+	chr8.2:3711890-3711909	None:intergenic	60.0%
	TTAAGGAGGAGACGAGGGGG+TGG	+	chr8.2:3711298-3711317	None:intergenic	60.0%
!	GGGTTTTCTCGTCCGTCTGC+AGG	-	chr8.2:3711448-3711467	MS.gene042279:CDS	60.0%
!!	GGAGGGGCACTTGTGCTAAC+AGG	-	chr8.2:3711382-3711401	MS.gene042279:CDS	60.0%
	AGGAGGAGACGAGGGGGTGG+AGG	+	chr8.2:3711295-3711314	None:intergenic	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr8.2	gene	3711277	3711966	3711277	ID=MS.gene042279
chr8.2	mRNA	3711277	3711966	3711277	ID=MS.gene042279.t1;Parent=MS.gene042279
chr8.2	exon	3711277	3711966	3711277	ID=MS.gene042279.t1.exon1;Parent=MS.gene042279.t1
chr8.2	CDS	3711277	3711966	3711277	ID=cds.MS.gene042279.t1;Parent=MS.gene042279.t1

Gene Sequence

>MS.gene042279

ATGTCTATTAGAAAACCTCCACCCCCTCGTCTCCTCCTTAACAATGTCTCTTGCATGAGAAATGCCTCGCAAGTTCTGTCTAATGTGAATGTCTCTCTTCATGATGGAGGGGCACTTGTGCTAACAGGTGCAAATGGCTCGGGAAAGTCCACTTTCATGCGCATGTTAGCTGGGTTTTCTCGTCCGTCTGCAGGAGAAATCCTTTGGAATGGCCATGACATTCAAAAATCTACAATCTTCCATCAGTATAAGCTTCAGCTTAACTGGGTCTGCCTCAAGCATGGAATTAATGAGAAGTCTACTGTTCTGGACAATGTTGAGTTGTTTGAACTTCTTGATTACAAACGAGGGAAGGCTAAGCTTGCACTTGAGTTGATGGGACTGGGAAGATTGGCTAAGGAAAAGCCTAAGATGCTTTCAATGGGCCAGCGGAAAAGATTGCAACTTGCCAGATTGCTCGCAATTGATCGCCCCATATGGTTGCTAGACGAGCCTTCAGTTGCATTAGATGATGAAGGTGTAAAGTTACTCGAGTACATTATTGCAGAACACAGGAAACAGGGAGGAATTGTGATTGTGGCGACTCATTTACCCATTGAGATAGAAGATTCCATGCTCTTGAGGCTGCCACCAAGGTTTCCAAGGAGGATGACACTTATAGATATGCTTGACCGGGCAGATATTAGTTAA

Protein sequence

>MS.gene042279.t1

MSIRKPPPPRLLLNNVSCMRNASQVLSNVNVSLHDGGALVLTGANGSGKSTFMRMLAGFSRPSAGEILWNGHDIQKSTIFHQYKLQLNWVCLKHGINEKSTVLDNVELFELLDYKRGKAKLALELMGLGRLAKEKPKMLSMGQRKRLQLARLLAIDRPIWLLDEPSVALDDEGVKLLEYIIAEHRKQGGIVIVATHLPIEIEDSMLLRLPPRFPRRMTLIDMLDRADIS