Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene043881.t1 | XP_003615219.1 | 96.9 | 322 | 10 | 0 | 1 | 322 | 43 | 364 | 1.00E-181 | 646 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene043881.t1 | Q07463 | 84.0 | 313 | 49 | 1 | 2 | 313 | 29 | 341 | 5.5e-155 | 548.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene043881.t1 | G7KBE2 | 96.9 | 322 | 10 | 0 | 1 | 322 | 43 | 364 | 7.5e-182 | 646.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene070896 | MS.gene043881 | PPI |
| MS.gene043881 | MS.gene069130 | PPI |
| MS.gene043881 | MS.gene027802 | PPI |
| MS.gene043881 | MS.gene068593 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene043881.t1 | MTR_5g065270 | 96.894 | 322 | 10 | 0 | 1 | 322 | 43 | 364 | 0.0 | 654 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene043881.t1 | AT3G21110 | 74.522 | 314 | 79 | 1 | 10 | 322 | 61 | 374 | 1.02e-177 | 499 |
| MS.gene043881.t1 | AT3G21110 | 74.522 | 314 | 79 | 1 | 10 | 322 | 61 | 374 | 1.02e-177 | 499 |
| MS.gene043881.t1 | AT3G21110 | 74.522 | 314 | 79 | 1 | 10 | 322 | 61 | 374 | 1.02e-177 | 499 |
Find 81 sgRNAs with CRISPR-Local
Find 396 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTTACTTTGCCGCGAATTT+TGG | 0.135114 | 5.3:+51395667 | None:intergenic |
| GTAGACACTAAATATGAATT+TGG | 0.160237 | 5.3:-51390786 | MS.gene043881:CDS |
| GGTGAAATTCAACCTTCTTT+TGG | 0.227916 | 5.3:-51395803 | MS.gene043881:CDS |
| CAAAGATCTTGTTTGTGAAT+TGG | 0.265968 | 5.3:-51390283 | MS.gene043881:CDS |
| CAATTCACAAACAAGATCTT+TGG | 0.290495 | 5.3:+51390284 | None:intergenic |
| CTCCTGATTCAAGTAGATAT+TGG | 0.295724 | 5.3:-51390618 | MS.gene043881:CDS |
| TCACAAACCTGGCCTTTAAA+AGG | 0.310522 | 5.3:+51395388 | None:intergenic |
| AAATATGTATGAAGTGTAAA+AGG | 0.346185 | 5.3:+51390231 | None:intergenic |
| GGTTGAATTTCACCTTGTTT+TGG | 0.355110 | 5.3:+51395812 | None:intergenic |
| TACTTGGACCGCTTTCAAAA+TGG | 0.359069 | 5.3:-51390583 | MS.gene043881:CDS |
| TAAATTACCTCGTCTTCATA+AGG | 0.360968 | 5.3:+51390397 | None:intergenic |
| ATCTACTTGAATCAGGAGTA+TGG | 0.368274 | 5.3:+51390623 | None:intergenic |
| AACTCACCAACAAACTCAAC+AGG | 0.389698 | 5.3:+51392709 | None:intergenic |
| ATTTAGTGTCTACCAATATA+AGG | 0.390282 | 5.3:+51390796 | None:intergenic |
| TTTAGGAGTTCTTGAGGTTG+TGG | 0.398832 | 5.3:-51390438 | MS.gene043881:intron |
| CAGCAAGTGGCCTCGGACCA+CGG | 0.399678 | 5.3:-51390819 | MS.gene043881:CDS |
| ACTAGGCATCATACCTCATC+TGG | 0.405677 | 5.3:+51391589 | None:intergenic |
| CTATGGACAGTGTACAATAA+AGG | 0.406741 | 5.3:-51391808 | MS.gene043881:CDS |
| ATCCAATATCTACTTGAATC+AGG | 0.407961 | 5.3:+51390616 | None:intergenic |
| GCTTTAAGGTTGTTTGAATA+CGG | 0.410229 | 5.3:-51390932 | MS.gene043881:CDS |
| TAGACACTAAATATGAATTT+GGG | 0.414632 | 5.3:-51390785 | MS.gene043881:CDS |
| TTTCTTGCAGATCATAGAAA+AGG | 0.417084 | 5.3:-51390996 | MS.gene043881:intron |
| TTGGATTGCCAATTCTTACT+TGG | 0.417145 | 5.3:-51390599 | MS.gene043881:CDS |
| AAAGCGGTCCAAGTAAGAAT+TGG | 0.417482 | 5.3:+51390591 | None:intergenic |
| GAAGTACGGATACTTCTCTA+TGG | 0.419796 | 5.3:-51391825 | MS.gene043881:CDS |
| GGCTTTGCAGCAAGTGGCCT+CGG | 0.419898 | 5.3:-51390826 | MS.gene043881:intron |
| CTCGGACCACGGCCTTATAT+TGG | 0.424336 | 5.3:-51390808 | MS.gene043881:CDS |
| AACGTCGTGATCTGCAGCTT+TGG | 0.425734 | 5.3:+51391621 | None:intergenic |
| ACAAGATCTTTGGGAGCATC+AGG | 0.426348 | 5.3:+51390294 | None:intergenic |
| TTCGAGATATTTATGACAGC+GGG | 0.431143 | 5.3:-51395474 | MS.gene043881:CDS |
| AATTCACAAACAAGATCTTT+GGG | 0.433274 | 5.3:+51390285 | None:intergenic |
| TGGCTTGGCGGTATGTCTAC+TGG | 0.448385 | 5.3:-51390263 | MS.gene043881:CDS |
| AAATTACCTCGTCTTCATAA+GGG | 0.456536 | 5.3:+51390398 | None:intergenic |
| CGTCATTGAAGCGCGAATCA+TGG | 0.465242 | 5.3:+51395835 | None:intergenic |
| AGGAAGAGTGAAATGAAGGT+TGG | 0.466497 | 5.3:+51395700 | None:intergenic |
| TGATCTGCAGCTTTGGTGGT+TGG | 0.469926 | 5.3:+51391628 | None:intergenic |
| ATTAGAGAGGGAAGAAGTGA+TGG | 0.487004 | 5.3:+51395736 | None:intergenic |
| TTCTTGCAGATCATAGAAAA+GGG | 0.493602 | 5.3:-51390995 | MS.gene043881:intron |
| GCGGTATGTCTACTGGCCCT+TGG | 0.494982 | 5.3:-51390256 | MS.gene043881:CDS |
| ATCTTGTTTGTGAATTGGCT+TGG | 0.497027 | 5.3:-51390278 | MS.gene043881:CDS |
| GTCGTGATCTGCAGCTTTGG+TGG | 0.510650 | 5.3:+51391624 | None:intergenic |
| AACCTGGCCTTTAAAAGGAA+TGG | 0.519246 | 5.3:+51395393 | None:intergenic |
| CATACCTCATCTGGAGTGAC+TGG | 0.522842 | 5.3:+51391598 | None:intergenic |
| AGGATTTGTCACTGGAAGTA+CGG | 0.522857 | 5.3:-51391839 | MS.gene043881:CDS |
| CAACTCAAATCCAAAATTCG+CGG | 0.523614 | 5.3:-51395677 | MS.gene043881:CDS |
| AAGGTTGTTTGAATACGGAC+AGG | 0.523918 | 5.3:-51390927 | MS.gene043881:intron |
| TTGTTTGTGAATTGGCTTGG+CGG | 0.524028 | 5.3:-51390275 | MS.gene043881:CDS |
| GTTGAGGAAGAGTGAAATGA+AGG | 0.529436 | 5.3:+51395696 | None:intergenic |
| TGAGCCTGAAAATGTTGATA+AGG | 0.531013 | 5.3:-51390557 | MS.gene043881:intron |
| ATCGTCAGAGTGCTTTCGAT+AGG | 0.538156 | 5.3:-51395426 | MS.gene043881:CDS |
| CATAACTAACCAAGTCCAAA+GGG | 0.538917 | 5.3:+51390156 | None:intergenic |
| TCGTCAGAGTGCTTTCGATA+GGG | 0.540013 | 5.3:-51395425 | MS.gene043881:CDS |
| GAATTTGGGAAGGCAAATGA+TGG | 0.541143 | 5.3:-51390771 | MS.gene043881:CDS |
| CTCGATTCTCACCATCAGGC+AGG | 0.556821 | 5.3:+51391761 | None:intergenic |
| ATGAGAGTATCTCCAAAAGA+AGG | 0.573305 | 5.3:+51395791 | None:intergenic |
| TTCAGAGAGACAATTAGAGA+GGG | 0.575946 | 5.3:+51395724 | None:intergenic |
| AGTTTCTAATGCAGTTGTGT+CGG | 0.576754 | 5.3:-51392776 | MS.gene043881:CDS |
| GCTTCAATGACGCCAAAACA+AGG | 0.580999 | 5.3:-51395824 | MS.gene043881:CDS |
| ACTTATATAGTGAAATGTGC+CGG | 0.581395 | 5.3:-51390195 | MS.gene043881:CDS |
| TTAGAGAGGGAAGAAGTGAT+GGG | 0.581751 | 5.3:+51395737 | None:intergenic |
| GTAGCTAGAGGATTTGTCAC+TGG | 0.586075 | 5.3:-51391847 | MS.gene043881:intron |
| ATGAAGTGTAAAAGGAGCCA+AGG | 0.587699 | 5.3:+51390239 | None:intergenic |
| GCATAACTAACCAAGTCCAA+AGG | 0.589776 | 5.3:+51390155 | None:intergenic |
| TTTCAGAGAGACAATTAGAG+AGG | 0.590732 | 5.3:+51395723 | None:intergenic |
| TTAATGAGACAAGTCTGTGG+TGG | 0.599591 | 5.3:-51392819 | MS.gene043881:CDS |
| ATCAATATTGTTGATTGATG+AGG | 0.603783 | 5.3:-51390748 | MS.gene043881:intron |
| TGTGGAAATGTCCTGCCTGA+TGG | 0.610426 | 5.3:-51391772 | MS.gene043881:intron |
| TGTCTACCAATATAAGGCCG+TGG | 0.612512 | 5.3:+51390802 | None:intergenic |
| CAATATAAGGCCGTGGTCCG+AGG | 0.612937 | 5.3:+51390809 | None:intergenic |
| CGTTCCAGTCACTCCAGATG+AGG | 0.615240 | 5.3:-51391602 | MS.gene043881:intron |
| CAACTGCATTAGAAACTATG+TGG | 0.624118 | 5.3:+51392782 | None:intergenic |
| CACTAAATATGAATTTGGGA+AGG | 0.627067 | 5.3:-51390781 | MS.gene043881:CDS |
| TGAAGTGTAAAAGGAGCCAA+GGG | 0.638024 | 5.3:+51390240 | None:intergenic |
| AAAGGCAATCGTAACTACTG+TGG | 0.638094 | 5.3:-51391790 | MS.gene043881:CDS |
| GATCTTTGGGAGCATCAGGA+AGG | 0.642412 | 5.3:+51390298 | None:intergenic |
| GTTCGAGATATTTATGACAG+CGG | 0.669366 | 5.3:-51395475 | MS.gene043881:CDS |
| TAGAGAGGGAAGAAGTGATG+GGG | 0.705269 | 5.3:+51395738 | None:intergenic |
| TTGCAACCCTTATGAAGACG+AGG | 0.711363 | 5.3:-51390404 | MS.gene043881:intron |
| TTCTTAATGAGACAAGTCTG+TGG | 0.716151 | 5.3:-51392822 | MS.gene043881:CDS |
| TCGAGATATTTATGACAGCG+GGG | 0.731522 | 5.3:-51395473 | MS.gene043881:CDS |
| ACTCACCAACAAACTCAACA+GGG | 0.734307 | 5.3:+51392710 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTGATTGATAAATTTAT+AGG | - | chr5.3:51394575-51394594 | MS.gene043881:intron | 10.0% |
| !! | AATTGATTGATAAATTTATA+GGG | - | chr5.3:51394576-51394595 | MS.gene043881:intron | 10.0% |
| !! | CAATGTAAATAAAAATTAAT+GGG | + | chr5.3:51393047-51393066 | None:intergenic | 10.0% |
| !!! | AATATCATCTAAAATAAAAT+TGG | - | chr5.3:51393413-51393432 | MS.gene043881:intron | 10.0% |
| !!! | AATTTTATGATAATAATCAT+GGG | + | chr5.3:51394869-51394888 | None:intergenic | 10.0% |
| !! | AAAAAAATAAAAGGAATAGA+GGG | + | chr5.3:51390977-51390996 | None:intergenic | 15.0% |
| !! | AACAATTAATGATTAAATGA+AGG | + | chr5.3:51391069-51391088 | None:intergenic | 15.0% |
| !! | AATGAACAATATTATGATAA+TGG | - | chr5.3:51394766-51394785 | MS.gene043881:intron | 15.0% |
| !! | ACTACAAACAAAAAAATAAA+AGG | + | chr5.3:51390986-51391005 | None:intergenic | 15.0% |
| !! | ATATATTATCTTATTATCCA+AGG | + | chr5.3:51393649-51393668 | None:intergenic | 15.0% |
| !! | CCAATGTAAATAAAAATTAA+TGG | + | chr5.3:51393048-51393067 | None:intergenic | 15.0% |
| !! | GAAATTATGTTAAAAACTAT+AGG | + | chr5.3:51393381-51393400 | None:intergenic | 15.0% |
| !! | TAAATTCAGATAATTATGAA+TGG | + | chr5.3:51393786-51393805 | None:intergenic | 15.0% |
| !! | TAAGTATATAAATGTGATAA+TGG | - | chr5.3:51395326-51395345 | MS.gene043881:intron | 15.0% |
| !! | TTGGATAATAAGATAATATA+TGG | - | chr5.3:51393648-51393667 | MS.gene043881:intron | 15.0% |
| !! | TTTGTTTAAATTTGATAGAT+TGG | - | chr5.3:51391972-51391991 | MS.gene043881:intron | 15.0% |
| !!! | ATGTTAATGTCTTTTAATAT+TGG | - | chr5.3:51393588-51393607 | MS.gene043881:intron | 15.0% |
| !!! | ATTTATCAAACTTTTTATCA+CGG | - | chr5.3:51392923-51392942 | MS.gene043881:intron | 15.0% |
| !!! | CCATTAATTTTTATTTACAT+TGG | - | chr5.3:51393045-51393064 | MS.gene043881:intron | 15.0% |
| !!! | GAATTTTATGATAATAATCA+TGG | + | chr5.3:51394870-51394889 | None:intergenic | 15.0% |
| !!! | TATTAATGTTATGCTTTTTT+AGG | - | chr5.3:51395539-51395558 | MS.gene043881:intron | 15.0% |
| !!! | TATTTGAATTGTTTTAAAAG+TGG | - | chr5.3:51394076-51394095 | MS.gene043881:intron | 15.0% |
| !!! | TTATGTATTGACAATTATTA+GGG | - | chr5.3:51391210-51391229 | MS.gene043881:intron | 15.0% |
| !!! | TTGTTTTATATTTAGTAGTT+TGG | - | chr5.3:51392967-51392986 | MS.gene043881:intron | 15.0% |
| !!! | TTTATGTATTGACAATTATT+AGG | - | chr5.3:51391209-51391228 | MS.gene043881:intron | 15.0% |
| !! | AAATATGTATGAAGTGTAAA+AGG | + | chr5.3:51395766-51395785 | None:intergenic | 20.0% |
| !! | AAATTATGTTAAACTGCAAT+AGG | - | chr5.3:51391805-51391824 | MS.gene043881:CDS | 20.0% |
| !! | AACAAATCTGAATAGAAAAA+TGG | - | chr5.3:51391842-51391861 | MS.gene043881:CDS | 20.0% |
| !! | AACGTAATTGAATTTCTTAT+TGG | - | chr5.3:51393524-51393543 | MS.gene043881:intron | 20.0% |
| !! | AATAAAATTGGAATTTGAAG+AGG | - | chr5.3:51393425-51393444 | MS.gene043881:intron | 20.0% |
| !! | AATGATCAAAAAGAAAATGT+TGG | - | chr5.3:51394485-51394504 | MS.gene043881:intron | 20.0% |
| !! | AATTTCAAGATAAAACAATC+AGG | + | chr5.3:51393147-51393166 | None:intergenic | 20.0% |
| !! | ACATAGAGGAAATTAAAATT+TGG | + | chr5.3:51394973-51394992 | None:intergenic | 20.0% |
| !! | ACGTAATTGAATTTCTTATT+GGG | - | chr5.3:51393525-51393544 | MS.gene043881:intron | 20.0% |
| !! | CAAAAAAATAAAAGGAATAG+AGG | + | chr5.3:51390978-51390997 | None:intergenic | 20.0% |
| !! | GTGATAAAAAGTTTGATAAA+TGG | + | chr5.3:51392924-51392943 | None:intergenic | 20.0% |
| !! | TAGACACTAAATATGAATTT+GGG | - | chr5.3:51395209-51395228 | MS.gene043881:intron | 20.0% |
| !! | TGTTTATTTACAGAGTTAAA+GGG | - | chr5.3:51390646-51390665 | MS.gene043881:intron | 20.0% |
| !!! | AAAAGCATAACATTAATAGA+TGG | + | chr5.3:51395537-51395556 | None:intergenic | 20.0% |
| !!! | AGTGAGTTTTTATTAAATGT+CGG | + | chr5.3:51390720-51390739 | None:intergenic | 20.0% |
| !!! | ATATGAGTTGATTTTTCTTT+AGG | - | chr5.3:51395672-51395691 | MS.gene043881:intron | 20.0% |
| ! | AACCACTAAACCAATATTTA+GGG | + | chr5.3:51393725-51393744 | None:intergenic | 25.0% |
| ! | AATAATGTTGAGAAACGTTT+GGG | - | chr5.3:51391539-51391558 | MS.gene043881:intron | 25.0% |
| ! | AATTCACAAACAAGATCTTT+GGG | + | chr5.3:51395712-51395731 | None:intergenic | 25.0% |
| ! | ACAAGTAGAAAAGTAAAACT+AGG | + | chr5.3:51394425-51394444 | None:intergenic | 25.0% |
| ! | ATAGGATATTATCATATGAC+AGG | - | chr5.3:51394303-51394322 | MS.gene043881:intron | 25.0% |
| ! | ATATGATAGATTGAATATGG+TGG | - | chr5.3:51392330-51392349 | MS.gene043881:intron | 25.0% |
| ! | ATATTATCATATGACAGGAA+TGG | - | chr5.3:51394308-51394327 | MS.gene043881:intron | 25.0% |
| ! | ATGATAATATCCTATTACAC+AGG | + | chr5.3:51394298-51394317 | None:intergenic | 25.0% |
| ! | ATTTAGTGTCTACCAATATA+AGG | + | chr5.3:51395201-51395220 | None:intergenic | 25.0% |
| ! | CAAAAAGAAAATGTTGGATT+TGG | - | chr5.3:51394491-51394510 | MS.gene043881:intron | 25.0% |
| ! | CTAAAATTGATTACACGAAT+TGG | + | chr5.3:51390749-51390768 | None:intergenic | 25.0% |
| ! | CTGTTTATTTACAGAGTTAA+AGG | - | chr5.3:51390645-51390664 | MS.gene043881:intron | 25.0% |
| ! | GGTAATAAGCTTATTTGTAT+AGG | - | chr5.3:51395088-51395107 | MS.gene043881:intron | 25.0% |
| ! | GGTATATGATAGATTGAATA+TGG | - | chr5.3:51392327-51392346 | MS.gene043881:intron | 25.0% |
| ! | GGTTTATTTACAGAGTTAAA+GGG | - | chr5.3:51390667-51390686 | MS.gene043881:intron | 25.0% |
| ! | GTAAAGCCATTATAAATACA+AGG | + | chr5.3:51393887-51393906 | None:intergenic | 25.0% |
| ! | GTAGACACTAAATATGAATT+TGG | - | chr5.3:51395208-51395227 | MS.gene043881:intron | 25.0% |
| ! | GTTTATTTACAGAGTTAAAG+GGG | - | chr5.3:51390647-51390666 | MS.gene043881:intron | 25.0% |
| ! | TAACCACTAAACCAATATTT+AGG | + | chr5.3:51393726-51393745 | None:intergenic | 25.0% |
| ! | TAATAAGATAATATATGGCG+TGG | - | chr5.3:51393653-51393672 | MS.gene043881:intron | 25.0% |
| ! | TAGGAAGTTGTACAATTAAA+GGG | - | chr5.3:51393982-51394001 | MS.gene043881:intron | 25.0% |
| ! | TCATTCAGTATCATTCTATT+AGG | - | chr5.3:51392786-51392805 | MS.gene043881:CDS | 25.0% |
| ! | TGATAAATCAACTAGCTAAA+TGG | + | chr5.3:51394548-51394567 | None:intergenic | 25.0% |
| ! | TGATAATATCCTATTACACA+GGG | + | chr5.3:51394297-51394316 | None:intergenic | 25.0% |
| ! | TTATGTTGGTATATGATAGA+GGG | - | chr5.3:51392320-51392339 | MS.gene043881:intron | 25.0% |
| ! | TTTAAACTCTTGTTAGGAAA+TGG | - | chr5.3:51390859-51390878 | MS.gene043881:intron | 25.0% |
| ! | TTTGTTCAAAATGATATCCT+TGG | - | chr5.3:51393629-51393648 | MS.gene043881:intron | 25.0% |
| !! | AGGATATCATTTTGAACAAA+AGG | + | chr5.3:51393629-51393648 | None:intergenic | 25.0% |
| !! | ATCAATATTGTTGATTGATG+AGG | - | chr5.3:51395246-51395265 | MS.gene043881:intron | 25.0% |
| !! | ATCGAGATTTCAAATTCTTT+TGG | - | chr5.3:51394250-51394269 | MS.gene043881:intron | 25.0% |
| !! | ATGTTGTTTAAACTCTTGTT+AGG | - | chr5.3:51390853-51390872 | MS.gene043881:intron | 25.0% |
| !! | ATTAAGTTGTTTATCCAAAC+AGG | - | chr5.3:51390449-51390468 | MS.gene043881:intron | 25.0% |
| !! | TACATCAATCAAATGCTTTT+TGG | + | chr5.3:51391029-51391048 | None:intergenic | 25.0% |
| !! | TACGTATTTTACAGAAGAAA+AGG | + | chr5.3:51393833-51393852 | None:intergenic | 25.0% |
| !! | TTAAGTTGTTTATCCAAACA+GGG | - | chr5.3:51390450-51390469 | MS.gene043881:intron | 25.0% |
| !!! | AAATTTGGTTCAAAAGCATT+TGG | - | chr5.3:51392290-51392309 | MS.gene043881:intron | 25.0% |
| !!! | AACGACCAAAAATTTTAAAG+AGG | - | chr5.3:51391169-51391188 | MS.gene043881:intron | 25.0% |
| !!! | AATTTGGGTTTTTATCATCA+CGG | + | chr5.3:51392675-51392694 | None:intergenic | 25.0% |
| !!! | AATTTGGTTCAAAAGCATTT+GGG | - | chr5.3:51392291-51392310 | MS.gene043881:intron | 25.0% |
| !!! | ACGACCAAAAATTTTAAAGA+GGG | - | chr5.3:51391170-51391189 | MS.gene043881:intron | 25.0% |
| !!! | AGTAGTCATATTTTAAGCAT+TGG | + | chr5.3:51391109-51391128 | None:intergenic | 25.0% |
| !!! | TACTCCCTCTTTAAAATTTT+TGG | + | chr5.3:51391177-51391196 | None:intergenic | 25.0% |
| !!! | TCAACAGTTTTTTTTGGATT+GGG | - | chr5.3:51393451-51393470 | MS.gene043881:intron | 25.0% |
| !!! | TGTTTTAAAAGTGGATGTTT+AGG | - | chr5.3:51394085-51394104 | MS.gene043881:intron | 25.0% |
| !!! | TTACTTTTCTACTTGTCATT+GGG | - | chr5.3:51394429-51394448 | MS.gene043881:intron | 25.0% |
| !!! | TTGTTTTATCTTGAAATTGC+AGG | - | chr5.3:51393149-51393168 | MS.gene043881:intron | 25.0% |
| !!! | TTTACTTTTCTACTTGTCAT+TGG | - | chr5.3:51394428-51394447 | MS.gene043881:intron | 25.0% |
| !!! | TTTTTATTTTAACCAATCCC+CGG | + | chr5.3:51393568-51393587 | None:intergenic | 25.0% |
| AAATTACCTCGTCTTCATAA+GGG | + | chr5.3:51395599-51395618 | None:intergenic | 30.0% | |
| AACTTATGCGGTTATTATCA+GGG | - | chr5.3:51391251-51391270 | MS.gene043881:intron | 30.0% | |
| AAGCAAGTGAAAAAGCTTTA+AGG | - | chr5.3:51395048-51395067 | MS.gene043881:intron | 30.0% | |
| AATAATCATGGGATCATCAT+AGG | + | chr5.3:51394858-51394877 | None:intergenic | 30.0% | |
| AATGATATCCTTGTACTCAT+CGG | - | chr5.3:51392137-51392156 | MS.gene043881:intron | 30.0% | |
| ACAATAAAGCAAGCAAAATG+TGG | + | chr5.3:51395125-51395144 | None:intergenic | 30.0% | |
| ACGATGATAAAATCCCAAAT+TGG | - | chr5.3:51391329-51391348 | MS.gene043881:intron | 30.0% | |
| ACTTATATAGTGAAATGTGC+CGG | - | chr5.3:51395799-51395818 | MS.gene043881:CDS | 30.0% | |
| AGAAATCTGCTTTCAATCTA+TGG | - | chr5.3:51392231-51392250 | MS.gene043881:intron | 30.0% | |
| AGATTAGAAGGTAACTTATG+CGG | - | chr5.3:51391239-51391258 | MS.gene043881:intron | 30.0% | |
| AGGAGTTATACAATCAATCT+AGG | - | chr5.3:51393963-51393982 | MS.gene043881:intron | 30.0% | |
| AGTTTCCAATACTATCTAAC+TGG | + | chr5.3:51390926-51390945 | None:intergenic | 30.0% | |
| ATACACTTATAAGAGTGAGA+TGG | - | chr5.3:51390769-51390788 | MS.gene043881:CDS | 30.0% | |
| ATATCAAATATGACCCTGTT+TGG | + | chr5.3:51390466-51390485 | None:intergenic | 30.0% | |
| ATCCAATATCTACTTGAATC+AGG | + | chr5.3:51395381-51395400 | None:intergenic | 30.0% | |
| ATGCAATCTTTGATACACAT+TGG | - | chr5.3:51395273-51395292 | MS.gene043881:intron | 30.0% | |
| CAAATAACAACTCTCTGTAT+TGG | + | chr5.3:51393316-51393335 | None:intergenic | 30.0% | |
| CAATTCACAAACAAGATCTT+TGG | + | chr5.3:51395713-51395732 | None:intergenic | 30.0% | |
| CACACACCTTGTATTTATAA+TGG | - | chr5.3:51393878-51393897 | MS.gene043881:intron | 30.0% | |
| CACTAAATATGAATTTGGGA+AGG | - | chr5.3:51395213-51395232 | MS.gene043881:intron | 30.0% | |
| CTAGGAAGTTGTACAATTAA+AGG | - | chr5.3:51393981-51394000 | MS.gene043881:intron | 30.0% | |
| CTGAGATGTATATGAAACAT+GGG | - | chr5.3:51392028-51392047 | MS.gene043881:intron | 30.0% | |
| CTTATGTTGGTATATGATAG+AGG | - | chr5.3:51392319-51392338 | MS.gene043881:intron | 30.0% | |
| GAAAACCAGTTAGATAGTAT+TGG | - | chr5.3:51390918-51390937 | MS.gene043881:intron | 30.0% | |
| GAATAATGTTGAGAAACGTT+TGG | - | chr5.3:51391538-51391557 | MS.gene043881:intron | 30.0% | |
| GGGTTTATTTACAGAGTTAA+AGG | - | chr5.3:51390666-51390685 | MS.gene043881:intron | 30.0% | |
| GTGATGATAAAAACCCAAAT+TGG | - | chr5.3:51392674-51392693 | MS.gene043881:intron | 30.0% | |
| TAAATTACCTCGTCTTCATA+AGG | + | chr5.3:51395600-51395619 | None:intergenic | 30.0% | |
| TAACTTATGCGGTTATTATC+AGG | - | chr5.3:51391250-51391269 | MS.gene043881:intron | 30.0% | |
| TAGCTTAGTCAATGTAATGT+TGG | - | chr5.3:51390493-51390512 | MS.gene043881:intron | 30.0% | |
| TATATGACAGAGGGAAAATT+TGG | - | chr5.3:51392275-51392294 | MS.gene043881:intron | 30.0% | |
| TATTAGGAACCTTATGGTTT+AGG | - | chr5.3:51392802-51392821 | MS.gene043881:CDS | 30.0% | |
| TCATTCTATTAGGAACCTTA+TGG | - | chr5.3:51392796-51392815 | MS.gene043881:CDS | 30.0% | |
| TTAGGGAAGTTAAGATTAGA+AGG | - | chr5.3:51391227-51391246 | MS.gene043881:intron | 30.0% | |
| TTCAGATCGCATTACAAAAT+GGG | - | chr5.3:51391744-51391763 | MS.gene043881:intron | 30.0% | |
| TTCATTTGGTATATGACAGA+GGG | - | chr5.3:51392411-51392430 | MS.gene043881:intron | 30.0% | |
| TTCCTAGTGTGAATGTTTAT+CGG | - | chr5.3:51391707-51391726 | MS.gene043881:intron | 30.0% | |
| TTCGTTCAGTATCAATCTAT+TGG | - | chr5.3:51391444-51391463 | MS.gene043881:intron | 30.0% | |
| TTCTTGCAGATCATAGAAAA+GGG | - | chr5.3:51394999-51395018 | MS.gene043881:intron | 30.0% | |
| TTTCTTGCAGATCATAGAAA+AGG | - | chr5.3:51394998-51395017 | MS.gene043881:intron | 30.0% | |
| ! | AACACCTTATCAACATTTTC+AGG | + | chr5.3:51395444-51395463 | None:intergenic | 30.0% |
| ! | AATCTATGGATTGCTTCATT+TGG | - | chr5.3:51392245-51392264 | MS.gene043881:intron | 30.0% |
| ! | AGTGTAAAACTGGTTTACTT+TGG | - | chr5.3:51390824-51390843 | MS.gene043881:intron | 30.0% |
| ! | CAAAGATCTTGTTTGTGAAT+TGG | - | chr5.3:51395711-51395730 | MS.gene043881:CDS | 30.0% |
| ! | GCTATTGTCACATTTTTATC+TGG | + | chr5.3:51393246-51393265 | None:intergenic | 30.0% |
| ! | GTTGGAGTGAGTATATTTTT+CGG | + | chr5.3:51394351-51394370 | None:intergenic | 30.0% |
| ! | TAGAGATTTAGTGGATACAT+TGG | - | chr5.3:51395508-51395527 | MS.gene043881:intron | 30.0% |
| ! | TATATGATAGAGGGAAGTTT+TGG | - | chr5.3:51392474-51392493 | MS.gene043881:intron | 30.0% |
| ! | TTTACATTTTCTACCGCTAA+TGG | - | chr5.3:51395616-51395635 | MS.gene043881:intron | 30.0% |
| !! | ATCCCTAAATATTGGTTTAG+TGG | - | chr5.3:51393720-51393739 | MS.gene043881:intron | 30.0% |
| !! | ATTTGGGTTTTTATCATCAC+GGG | + | chr5.3:51392674-51392693 | None:intergenic | 30.0% |
| !! | GCTTTAAGGTTGTTTGAATA+CGG | - | chr5.3:51395062-51395081 | MS.gene043881:intron | 30.0% |
| !! | TTTTTAGCAACTTATGAGGT+AGG | + | chr5.3:51394812-51394831 | None:intergenic | 30.0% |
| !!! | AAAGTGCATTTTTTTCCCTT+TGG | - | chr5.3:51395823-51395842 | MS.gene043881:CDS | 30.0% |
| !!! | AAGGATCCGTTTTTTAAAAG+GGG | + | chr5.3:51394632-51394651 | None:intergenic | 30.0% |
| !!! | ACAAGGATCCGTTTTTTAAA+AGG | + | chr5.3:51394634-51394653 | None:intergenic | 30.0% |
| !!! | CAAGGATCCGTTTTTTAAAA+GGG | + | chr5.3:51394633-51394652 | None:intergenic | 30.0% |
| !!! | CTACTTTTTAGCAACTTATG+AGG | + | chr5.3:51394816-51394835 | None:intergenic | 30.0% |
| !!! | GTCAACAGTTTTTTTTGGAT+TGG | - | chr5.3:51393450-51393469 | MS.gene043881:intron | 30.0% |
| AAATTACAGCCCTGTGTAAT+AGG | - | chr5.3:51394285-51394304 | MS.gene043881:intron | 35.0% | |
| AAGCGCTTATGTATGATAAG+CGG | - | chr5.3:51390408-51390427 | MS.gene043881:CDS | 35.0% | |
| ACAAAATGGGACAAAACTCT+TGG | - | chr5.3:51391757-51391776 | MS.gene043881:intron | 35.0% | |
| ACATTTCTCAAGCAAACTGA+AGG | - | chr5.3:51392565-51392584 | MS.gene043881:intron | 35.0% | |
| AGTTTCTAATGCAGTTGTGT+CGG | - | chr5.3:51393218-51393237 | MS.gene043881:intron | 35.0% | |
| ATACCAAATGAAGCAATCCA+TGG | + | chr5.3:51392251-51392270 | None:intergenic | 35.0% | |
| ATCGGATGTTAGTGTAAAAC+TGG | - | chr5.3:51390814-51390833 | MS.gene043881:CDS | 35.0% | |
| ATCTACTTGAATCAGGAGTA+TGG | + | chr5.3:51395374-51395393 | None:intergenic | 35.0% | |
| CAAAATATGTGTCAAGGTGA+TGG | + | chr5.3:51394120-51394139 | None:intergenic | 35.0% | |
| CAAAATGGGACAAAACTCTT+GGG | - | chr5.3:51391758-51391777 | MS.gene043881:intron | 35.0% | |
| CAACTCAAATCCAAAATTCG+CGG | - | chr5.3:51390317-51390336 | MS.gene043881:intron | 35.0% | |
| CAACTGCATTAGAAACTATG+TGG | + | chr5.3:51393215-51393234 | None:intergenic | 35.0% | |
| CACAAGCAAAATATGTGTCA+AGG | + | chr5.3:51394126-51394145 | None:intergenic | 35.0% | |
| CACACTAGGAAGAGTAAAAT+TGG | + | chr5.3:51391698-51391717 | None:intergenic | 35.0% | |
| CATTTCTCAAGCAAACTGAA+GGG | - | chr5.3:51392566-51392585 | MS.gene043881:intron | 35.0% | |
| CTATGGACAGTGTACAATAA+AGG | - | chr5.3:51394186-51394205 | MS.gene043881:intron | 35.0% | |
| CTATTACTCTTCTTTCTGCT+AGG | + | chr5.3:51392595-51392614 | None:intergenic | 35.0% | |
| CTCCTGATTCAAGTAGATAT+TGG | - | chr5.3:51395376-51395395 | MS.gene043881:intron | 35.0% | |
| CTTCAGATCGCATTACAAAA+TGG | - | chr5.3:51391743-51391762 | MS.gene043881:intron | 35.0% | |
| CTTCATTTGGTATATGACAG+AGG | - | chr5.3:51392410-51392429 | MS.gene043881:intron | 35.0% | |
| GAATCCATTAGAAGAACTCA+TGG | - | chr5.3:51391629-51391648 | MS.gene043881:CDS | 35.0% | |
| GAGCAGGAAACTAATAGATA+AGG | + | chr5.3:51394610-51394629 | None:intergenic | 35.0% | |
| GATAAAAACCCAAATTGGAG+AGG | - | chr5.3:51392679-51392698 | MS.gene043881:intron | 35.0% | |
| GATAAAATCCCAAATTGGAG+AGG | - | chr5.3:51391334-51391353 | MS.gene043881:intron | 35.0% | |
| GATGAAAAGAATCACAAACC+TGG | + | chr5.3:51390620-51390639 | None:intergenic | 35.0% | |
| GCTACACAATAATCCATTAG+CGG | + | chr5.3:51395632-51395651 | None:intergenic | 35.0% | |
| GCTGAGATGTATATGAAACA+TGG | - | chr5.3:51392027-51392046 | MS.gene043881:intron | 35.0% | |
| GCTTGACTTTACAATTTGAC+TGG | - | chr5.3:51395147-51395166 | MS.gene043881:intron | 35.0% | |
| GGATTGCTTCATTTGGTATA+TGG | - | chr5.3:51392252-51392271 | MS.gene043881:intron | 35.0% | |
| GGTATATGGTATATGACAGA+GGG | - | chr5.3:51392266-51392285 | MS.gene043881:intron | 35.0% | |
| GTGGTTACTGAATATGAACA+TGG | - | chr5.3:51392204-51392223 | MS.gene043881:intron | 35.0% | |
| GTGTAGAAGCAAATCTCAAA+GGG | - | chr5.3:51391564-51391583 | MS.gene043881:intron | 35.0% | |
| GTTCGAGATATTTATGACAG+CGG | - | chr5.3:51390519-51390538 | MS.gene043881:intron | 35.0% | |
| TAAAAACAACCTTGTCCTCA+AGG | + | chr5.3:51392631-51392650 | None:intergenic | 35.0% | |
| TATCTATGATCAGTGATGCT+GGG | - | chr5.3:51394727-51394746 | MS.gene043881:intron | 35.0% | |
| TCAAATAGAGGTTGTAGCAA+TGG | - | chr5.3:51391890-51391909 | MS.gene043881:intron | 35.0% | |
| TGAGCCTGAAAATGTTGATA+AGG | - | chr5.3:51395437-51395456 | MS.gene043881:CDS | 35.0% | |
| TGCAAGAAAATGCAACATAG+AGG | + | chr5.3:51394987-51395006 | None:intergenic | 35.0% | |
| TGCGAAAAGTTATCCATTTC+TGG | + | chr5.3:51394938-51394957 | None:intergenic | 35.0% | |
| TGGACAGAAAAGTAGACAAT+AGG | - | chr5.3:51394511-51394530 | MS.gene043881:intron | 35.0% | |
| TGGTATATGGTATATGACAG+AGG | - | chr5.3:51392265-51392284 | MS.gene043881:intron | 35.0% | |
| TGTTGCTGTATTATCTGTAG+GGG | - | chr5.3:51391292-51391311 | MS.gene043881:intron | 35.0% | |
| TTACTGAATATGAACATGGC+TGG | - | chr5.3:51392208-51392227 | MS.gene043881:intron | 35.0% | |
| TTAGTCAATGTAATGTTGGC+AGG | - | chr5.3:51390497-51390516 | MS.gene043881:intron | 35.0% | |
| TTATCTATGATCAGTGATGC+TGG | - | chr5.3:51394726-51394745 | MS.gene043881:intron | 35.0% | |
| TTCAGAGAGACAATTAGAGA+GGG | + | chr5.3:51390273-51390292 | None:intergenic | 35.0% | |
| TTCGAGATATTTATGACAGC+GGG | - | chr5.3:51390520-51390539 | MS.gene043881:intron | 35.0% | |
| TTCTTAATGAGACAAGTCTG+TGG | - | chr5.3:51393172-51393191 | MS.gene043881:intron | 35.0% | |
| TTGGATTGCCAATTCTTACT+TGG | - | chr5.3:51395395-51395414 | MS.gene043881:intron | 35.0% | |
| TTTCAGAGAGACAATTAGAG+AGG | + | chr5.3:51390274-51390293 | None:intergenic | 35.0% | |
| TTTCATATACATCTCAGCCA+AGG | + | chr5.3:51392025-51392044 | None:intergenic | 35.0% | |
| ! | AATCCATGGATTGCTTCATT+TGG | - | chr5.3:51392397-51392416 | MS.gene043881:intron | 35.0% |
| ! | ATCTTGTTTGTGAATTGGCT+TGG | - | chr5.3:51395716-51395735 | MS.gene043881:CDS | 35.0% |
| ! | CTTCTTAGATTGAGTATTGC+TGG | - | chr5.3:51395483-51395502 | MS.gene043881:intron | 35.0% |
| ! | CTTGCTTCCATTCCTTTTAA+AGG | - | chr5.3:51390594-51390613 | MS.gene043881:CDS | 35.0% |
| ! | GGGAAAAAAATGCACTTTTC+CGG | + | chr5.3:51395821-51395840 | None:intergenic | 35.0% |
| ! | GGTGAAATTCAACCTTCTTT+TGG | - | chr5.3:51390191-51390210 | MS.gene043881:CDS | 35.0% |
| ! | GTAAAACAATGGACTCTCAT+CGG | - | chr5.3:51390796-51390815 | MS.gene043881:CDS | 35.0% |
| ! | GTGTTGCTGTATTATCTGTA+GGG | - | chr5.3:51391291-51391310 | MS.gene043881:intron | 35.0% |
| ! | TATTTAGTAAGCACTAGCCT+AGG | - | chr5.3:51393926-51393945 | MS.gene043881:intron | 35.0% |
| ! | TGTGTTGCTGTATTATCTGT+AGG | - | chr5.3:51391290-51391309 | MS.gene043881:intron | 35.0% |
| !! | AAGGCATTGAGAGGAATTTA+TGG | - | chr5.3:51392084-51392103 | MS.gene043881:intron | 35.0% |
| !! | AGGCATTGAGAGGAATTTAT+GGG | - | chr5.3:51392085-51392104 | MS.gene043881:intron | 35.0% |
| !! | ATGAGAGTATCTCCAAAAGA+AGG | + | chr5.3:51390206-51390225 | None:intergenic | 35.0% |
| !! | ATGCCTTCTTTTAGTTAGTG+AGG | - | chr5.3:51394897-51394916 | MS.gene043881:intron | 35.0% |
| !! | GATGTCTGCTTTTCAAATAG+AGG | - | chr5.3:51391878-51391897 | MS.gene043881:intron | 35.0% |
| !! | GGAAGAGTATCCCTAAATAT+TGG | - | chr5.3:51393712-51393731 | MS.gene043881:intron | 35.0% |
| !! | GGTTGAATTTCACCTTGTTT+TGG | + | chr5.3:51390185-51390204 | None:intergenic | 35.0% |
| !! | TTGCTGGTTTAGAGATTTAG+TGG | - | chr5.3:51395499-51395518 | MS.gene043881:intron | 35.0% |
| !!! | ACAGTTTTTTTTGGATTGGG+TGG | - | chr5.3:51393454-51393473 | MS.gene043881:intron | 35.0% |
| !!! | AGGCAGTCAACAGTTTTTTT+TGG | - | chr5.3:51393445-51393464 | MS.gene043881:intron | 35.0% |
| !!! | AGTTTTTTTTGGATTGGGTG+GGG | - | chr5.3:51393456-51393475 | MS.gene043881:intron | 35.0% |
| !!! | CAGTTTTTTTTGGATTGGGT+GGG | - | chr5.3:51393455-51393474 | MS.gene043881:intron | 35.0% |
| !!! | CATTTTTTTCCCTTTGGACT+TGG | - | chr5.3:51395829-51395848 | MS.gene043881:CDS | 35.0% |
| !!! | CGAATTTTGGATTTGAGTTG+AGG | + | chr5.3:51390317-51390336 | None:intergenic | 35.0% |
| !!! | TGAGGACAAGGTTGTTTTTA+AGG | - | chr5.3:51392631-51392650 | MS.gene043881:intron | 35.0% |
| !!! | TGCTTTTTTAGGAGTTCTTG+AGG | - | chr5.3:51395550-51395569 | MS.gene043881:intron | 35.0% |
| AAACTGTAGCAGTAACTGCT+TGG | - | chr5.3:51390941-51390960 | MS.gene043881:CDS | 40.0% | |
| AAAGCGGTCCAAGTAAGAAT+TGG | + | chr5.3:51395406-51395425 | None:intergenic | 40.0% | |
| AAAGGCAATCGTAACTACTG+TGG | - | chr5.3:51394204-51394223 | MS.gene043881:intron | 40.0% | |
| AAATCTCGATTCTCACCATC+AGG | + | chr5.3:51394240-51394259 | None:intergenic | 40.0% | |
| AACCCAAATTGGAGAGGAAA+TGG | - | chr5.3:51392685-51392704 | MS.gene043881:intron | 40.0% | |
| AACTCACCAACAAACTCAAC+AGG | + | chr5.3:51393288-51393307 | None:intergenic | 40.0% | |
| AAGGTTGTTTGAATACGGAC+AGG | - | chr5.3:51395067-51395086 | MS.gene043881:intron | 40.0% | |
| AATAGAGGTTGTAGCAATGG+AGG | - | chr5.3:51391893-51391912 | MS.gene043881:intron | 40.0% | |
| ACAAGTGGTTGTTGTATGGA+AGG | - | chr5.3:51392065-51392084 | MS.gene043881:intron | 40.0% | |
| ACGCCTCACTAACTAAAAGA+AGG | + | chr5.3:51394903-51394922 | None:intergenic | 40.0% | |
| ACTCACCAACAAACTCAACA+GGG | + | chr5.3:51393287-51393306 | None:intergenic | 40.0% | |
| AGAAACCATTTCCAACCTTG+AGG | - | chr5.3:51392613-51392632 | MS.gene043881:intron | 40.0% | |
| AGAGAAATGTCTCTTCTCTG+AGG | - | chr5.3:51391472-51391491 | MS.gene043881:intron | 40.0% | |
| AGCACCATGAGTTCTTCTAA+TGG | + | chr5.3:51391636-51391655 | None:intergenic | 40.0% | |
| AGGAAGAGTGAAATGAAGGT+TGG | + | chr5.3:51390297-51390316 | None:intergenic | 40.0% | |
| AGGATTTGTCACTGGAAGTA+CGG | - | chr5.3:51394155-51394174 | MS.gene043881:intron | 40.0% | |
| AGGGAAGAACAATACTCTTG+TGG | - | chr5.3:51392182-51392201 | MS.gene043881:intron | 40.0% | |
| ATGAAGTGTAAAAGGAGCCA+AGG | + | chr5.3:51395758-51395777 | None:intergenic | 40.0% | |
| ATTAGAGAGGGAAGAAGTGA+TGG | + | chr5.3:51390261-51390280 | None:intergenic | 40.0% | |
| ATTCAATCGCTCAGCCATTT+GGG | + | chr5.3:51391522-51391541 | None:intergenic | 40.0% | |
| CACCATTTCCTCTCCAATTT+GGG | + | chr5.3:51392690-51392709 | None:intergenic | 40.0% | |
| CCTAGAGTTATCAACTTCCT+AGG | + | chr5.3:51393946-51393965 | None:intergenic | 40.0% | |
| CGTGTAGAAGCAAATCTCAA+AGG | - | chr5.3:51391563-51391582 | MS.gene043881:intron | 40.0% | |
| CTCCGATAAACATTCACACT+AGG | + | chr5.3:51391712-51391731 | None:intergenic | 40.0% | |
| CTCTCTCTACCTAAACCATA+AGG | + | chr5.3:51392814-51392833 | None:intergenic | 40.0% | |
| CTTATAAGAGTGAGATGGTG+TGG | - | chr5.3:51390774-51390793 | MS.gene043881:CDS | 40.0% | |
| CTTTGCATGATTCACTGTGA+TGG | - | chr5.3:51390896-51390915 | MS.gene043881:intron | 40.0% | |
| GAAGAACAATACTCTTGTGG+TGG | - | chr5.3:51392185-51392204 | MS.gene043881:intron | 40.0% | |
| GAAGTACGGATACTTCTCTA+TGG | - | chr5.3:51394169-51394188 | MS.gene043881:intron | 40.0% | |
| GAATTTGGGAAGGCAAATGA+TGG | - | chr5.3:51395223-51395242 | MS.gene043881:intron | 40.0% | |
| GACGTTGAAGATTTAGCACA+AGG | + | chr5.3:51394651-51394670 | None:intergenic | 40.0% | |
| GAGATGGTGTGGTAAAACAA+TGG | - | chr5.3:51390785-51390804 | MS.gene043881:CDS | 40.0% | |
| GATGTATATGAAACATGGGC+TGG | - | chr5.3:51392032-51392051 | MS.gene043881:intron | 40.0% | |
| GGTTCTATGTTCCTAACTAC+AGG | - | chr5.3:51395347-51395366 | MS.gene043881:intron | 40.0% | |
| GTCTTCTTTCAAAACCTGTG+TGG | - | chr5.3:51393067-51393086 | MS.gene043881:intron | 40.0% | |
| GTTGAGGAAGAGTGAAATGA+AGG | + | chr5.3:51390301-51390320 | None:intergenic | 40.0% | |
| GTTGCTGTATTATCTGTAGG+GGG | - | chr5.3:51391293-51391312 | MS.gene043881:intron | 40.0% | |
| TACTTGGACCGCTTTCAAAA+TGG | - | chr5.3:51395411-51395430 | MS.gene043881:CDS | 40.0% | |
| TATTCAATCGCTCAGCCATT+TGG | + | chr5.3:51391523-51391542 | None:intergenic | 40.0% | |
| TCACCATTTCCTCTCCAATT+TGG | + | chr5.3:51392691-51392710 | None:intergenic | 40.0% | |
| TCGAGATATTTATGACAGCG+GGG | - | chr5.3:51390521-51390540 | MS.gene043881:intron | 40.0% | |
| TGAAGTGTAAAAGGAGCCAA+GGG | + | chr5.3:51395757-51395776 | None:intergenic | 40.0% | |
| TGAGACTTTGTGAACTACCT+TGG | - | chr5.3:51392005-51392024 | MS.gene043881:intron | 40.0% | |
| TGGGGATTAGAGCTTTCTTA+AGG | - | chr5.3:51393474-51393493 | MS.gene043881:intron | 40.0% | |
| TTAAGGCGGTGACAATGATA+AGG | - | chr5.3:51392648-51392667 | MS.gene043881:intron | 40.0% | |
| TTAATGAGACAAGTCTGTGG+TGG | - | chr5.3:51393175-51393194 | MS.gene043881:intron | 40.0% | |
| TTAGAGAGGGAAGAAGTGAT+GGG | + | chr5.3:51390260-51390279 | None:intergenic | 40.0% | |
| TTGCTGTATTATCTGTAGGG+GGG | - | chr5.3:51391294-51391313 | MS.gene043881:intron | 40.0% | |
| TTTAGGAGTTCTTGAGGTTG+TGG | - | chr5.3:51395556-51395575 | MS.gene043881:intron | 40.0% | |
| ! | AACCTGGCCTTTAAAAGGAA+TGG | + | chr5.3:51390604-51390623 | None:intergenic | 40.0% |
| ! | ACTTACTTTGCCGCGAATTT+TGG | + | chr5.3:51390330-51390349 | None:intergenic | 40.0% |
| ! | AGTATAAGAGGTGTGTACGA+GGG | - | chr5.3:51391412-51391431 | MS.gene043881:intron | 40.0% |
| ! | AGTATAAGAGGTGTGTAGGA+GGG | - | chr5.3:51392753-51392772 | MS.gene043881:CDS | 40.0% |
| ! | CATGGATTGAAAGCAGAAAG+CGG | + | chr5.3:51392385-51392404 | None:intergenic | 40.0% |
| ! | CATTTGGTTGCTGCTTATGT+TGG | - | chr5.3:51392451-51392470 | MS.gene043881:intron | 40.0% |
| ! | GTTTTCCCTGTTGAGTTTGT+TGG | - | chr5.3:51393279-51393298 | MS.gene043881:intron | 40.0% |
| ! | TCACAAACCTGGCCTTTAAA+AGG | + | chr5.3:51390609-51390628 | None:intergenic | 40.0% |
| ! | TTTTGCTTGTGTGTAGCTAG+AGG | - | chr5.3:51394135-51394154 | MS.gene043881:intron | 40.0% |
| !! | ACAAGAGTATTGTTCTTCCC+TGG | + | chr5.3:51392183-51392202 | None:intergenic | 40.0% |
| !! | AGTTTTGGTCCTCAAGCATT+TGG | - | chr5.3:51392489-51392508 | MS.gene043881:intron | 40.0% |
| !! | ATGTGTCAAGGTGATGGTTT+TGG | + | chr5.3:51394114-51394133 | None:intergenic | 40.0% |
| !! | CAAATGCTTTTTGGTCTGTG+TGG | + | chr5.3:51391020-51391039 | None:intergenic | 40.0% |
| !! | CCTAGGAAGTTGATAACTCT+AGG | - | chr5.3:51393943-51393962 | MS.gene043881:intron | 40.0% |
| !! | CCTGCTCCCCTTTTAAAAAA+CGG | - | chr5.3:51394623-51394642 | MS.gene043881:intron | 40.0% |
| !! | GCTCAAGACCATTTTGAAAG+CGG | + | chr5.3:51395422-51395441 | None:intergenic | 40.0% |
| !! | GTTCATTATTTCTGCTGACC+AGG | + | chr5.3:51394753-51394772 | None:intergenic | 40.0% |
| !! | GTTTTGGTCCTCAAGCATTT+GGG | - | chr5.3:51392490-51392509 | MS.gene043881:intron | 40.0% |
| !! | TTCCATTCCTTTTAAAGGCC+AGG | - | chr5.3:51390599-51390618 | MS.gene043881:CDS | 40.0% |
| !! | TTCTTTTAGTTAGTGAGGCG+TGG | - | chr5.3:51394902-51394921 | MS.gene043881:intron | 40.0% |
| !! | TTGTTTGTGAATTGGCTTGG+CGG | - | chr5.3:51395719-51395738 | MS.gene043881:CDS | 40.0% |
| !!! | GGACAAGGTTGTTTTTAAGG+CGG | - | chr5.3:51392634-51392653 | MS.gene043881:intron | 40.0% |
| AACAACCTTGTCCTCAAGGT+TGG | + | chr5.3:51392627-51392646 | None:intergenic | 45.0% | |
| AAGTTAGTTAGAGAGCGGAG+GGG | - | chr5.3:51391372-51391391 | MS.gene043881:intron | 45.0% | |
| AATGCAAATGCTAACGTCCG+GGG | - | chr5.3:51393548-51393567 | MS.gene043881:intron | 45.0% | |
| ACGCACAAGTGGTTGTTGTA+TGG | - | chr5.3:51392061-51392080 | MS.gene043881:intron | 45.0% | |
| ACTAGGCATCATACCTCATC+TGG | + | chr5.3:51394408-51394427 | None:intergenic | 45.0% | |
| ATAGTAACCATCGACCAACC+AGG | + | chr5.3:51393106-51393125 | None:intergenic | 45.0% | |
| ATATGGCGTGGATGTATGCT+TGG | - | chr5.3:51393665-51393684 | MS.gene043881:intron | 45.0% | |
| ATCCCAAATTGGAGAGGAAG+TGG | - | chr5.3:51391340-51391359 | MS.gene043881:intron | 45.0% | |
| CAAGTTAGTTAGAGAGCGGA+GGG | - | chr5.3:51391371-51391390 | MS.gene043881:intron | 45.0% | |
| CACCACTTCCTCTCCAATTT+GGG | + | chr5.3:51391345-51391364 | None:intergenic | 45.0% | |
| CATTTCCAACCTTGAGGACA+AGG | - | chr5.3:51392619-51392638 | MS.gene043881:intron | 45.0% | |
| CGCTTTCTGCTTTCAATCCA+TGG | - | chr5.3:51392383-51392402 | MS.gene043881:intron | 45.0% | |
| CTGGCAAGTTAGTTAGAGAG+CGG | - | chr5.3:51391367-51391386 | MS.gene043881:intron | 45.0% | |
| CTTGTCCTCAAGGTTGGAAA+TGG | + | chr5.3:51392621-51392640 | None:intergenic | 45.0% | |
| GAAAATCCCTTCTACCTGGT+TGG | - | chr5.3:51393089-51393108 | MS.gene043881:intron | 45.0% | |
| GAATGCAAATGCTAACGTCC+GGG | - | chr5.3:51393547-51393566 | MS.gene043881:intron | 45.0% | |
| GCTTCAATGACGCCAAAACA+AGG | - | chr5.3:51390170-51390189 | MS.gene043881:CDS | 45.0% | |
| GGAATGCAAATGCTAACGTC+CGG | - | chr5.3:51393546-51393565 | MS.gene043881:intron | 45.0% | |
| GTAGCTAGAGGATTTGTCAC+TGG | - | chr5.3:51394147-51394166 | MS.gene043881:intron | 45.0% | |
| TAGAGAGGGAAGAAGTGATG+GGG | + | chr5.3:51390259-51390278 | None:intergenic | 45.0% | |
| TCAAGCCATTGAAGACACTC+AGG | + | chr5.3:51392538-51392557 | None:intergenic | 45.0% | |
| TCACCACTTCCTCTCCAATT+TGG | + | chr5.3:51391346-51391365 | None:intergenic | 45.0% | |
| TCCAACCTGAGTGTCTTCAA+TGG | - | chr5.3:51392530-51392549 | MS.gene043881:intron | 45.0% | |
| TGACCAGACAATGTGATCCA+GGG | - | chr5.3:51392163-51392182 | MS.gene043881:intron | 45.0% | |
| TGCTGTATTATCTGTAGGGG+GGG | - | chr5.3:51391295-51391314 | MS.gene043881:intron | 45.0% | |
| TGTCTACCAATATAAGGCCG+TGG | + | chr5.3:51395195-51395214 | None:intergenic | 45.0% | |
| TGTGGAAAATCCCTTCTACC+TGG | - | chr5.3:51393085-51393104 | MS.gene043881:intron | 45.0% | |
| TGTTTATCGGAGTCGAGTCA+TGG | - | chr5.3:51391720-51391739 | MS.gene043881:intron | 45.0% | |
| TTGCAACCCTTATGAAGACG+AGG | - | chr5.3:51395590-51395609 | MS.gene043881:intron | 45.0% | |
| ! | AGGAGTATGGACCTGTAGTT+AGG | + | chr5.3:51395361-51395380 | None:intergenic | 45.0% |
| ! | AGGGAGTATAAGAGGTGTGT+AGG | - | chr5.3:51391408-51391427 | MS.gene043881:intron | 45.0% |
| ! | ATCGTCAGAGTGCTTTCGAT+AGG | - | chr5.3:51390568-51390587 | MS.gene043881:CDS | 45.0% |
| ! | CTCTGAGGATCTTATGCTCT+GGG | - | chr5.3:51392845-51392864 | MS.gene043881:intron | 45.0% |
| ! | GAGTATAAGAGGTGTGTACG+AGG | - | chr5.3:51391411-51391430 | MS.gene043881:intron | 45.0% |
| ! | GAGTATAAGAGGTGTGTAGG+AGG | - | chr5.3:51392752-51392771 | MS.gene043881:CDS | 45.0% |
| ! | GTAGAAGGGATTTTCCACAC+AGG | + | chr5.3:51393084-51393103 | None:intergenic | 45.0% |
| ! | TCGTCAGAGTGCTTTCGATA+GGG | - | chr5.3:51390569-51390588 | MS.gene043881:CDS | 45.0% |
| ! | TCTCTGAGGATCTTATGCTC+TGG | - | chr5.3:51392844-51392863 | MS.gene043881:intron | 45.0% |
| ! | TGAGGAGATTCAGCTTGCTT+TGG | - | chr5.3:51391605-51391624 | MS.gene043881:CDS | 45.0% |
| !! | ACAAGATCTTTGGGAGCATC+AGG | + | chr5.3:51395703-51395722 | None:intergenic | 45.0% |
| !! | CATTTGGGTGCTGCTTATGT+TGG | - | chr5.3:51392306-51392325 | MS.gene043881:intron | 45.0% |
| !! | GTTGTATGGAAGGCATTGAG+AGG | - | chr5.3:51392075-51392094 | MS.gene043881:intron | 45.0% |
| !! | TGGTACTGGTCTTCCAGAAA+TGG | - | chr5.3:51394922-51394941 | MS.gene043881:intron | 45.0% |
| !!! | CCGTTTTTTAAAAGGGGAGC+AGG | + | chr5.3:51394626-51394645 | None:intergenic | 45.0% |
| !!! | ATTTTTTTGTTTAATTATTT+TGG | - | chr5.3:51393691-51393710 | MS.gene043881:intron | 5.0% |
| AAATGCTAACGTCCGGGGAT+TGG | - | chr5.3:51393553-51393572 | MS.gene043881:intron | 50.0% | |
| AACGTCGTGATCTGCAGCTT+TGG | + | chr5.3:51394376-51394395 | None:intergenic | 50.0% | |
| AGGTGTGTACGAGGGAAAGA+GGG | - | chr5.3:51391420-51391439 | MS.gene043881:intron | 50.0% | |
| AGGTGTGTAGGAGGGAAAGA+GGG | - | chr5.3:51392761-51392780 | MS.gene043881:CDS | 50.0% | |
| CACTTGCACCCAAATGCTTG+AGG | + | chr5.3:51392501-51392520 | None:intergenic | 50.0% | |
| CATCGACCAACCAGGTAGAA+GGG | + | chr5.3:51393098-51393117 | None:intergenic | 50.0% | |
| CTGGCAAGTTAGAGAGTGGA+GGG | - | chr5.3:51392712-51392731 | MS.gene043881:intron | 50.0% | |
| CTGGGCTGCAAAAACCCAAA+TGG | - | chr5.3:51391505-51391524 | MS.gene043881:intron | 50.0% | |
| CTTCCCTGGATCACATTGTC+TGG | + | chr5.3:51392169-51392188 | None:intergenic | 50.0% | |
| GAGGGGATATACACGTGAGA+GGG | - | chr5.3:51391389-51391408 | MS.gene043881:intron | 50.0% | |
| GCAAGTTAGTTAGAGAGCGG+AGG | - | chr5.3:51391370-51391389 | MS.gene043881:intron | 50.0% | |
| GCCATTGAAGACACTCAGGT+TGG | + | chr5.3:51392534-51392553 | None:intergenic | 50.0% | |
| GGTCACAACCGATGAGTACA+AGG | + | chr5.3:51392148-51392167 | None:intergenic | 50.0% | |
| GTGACCAGACAATGTGATCC+AGG | - | chr5.3:51392162-51392181 | MS.gene043881:intron | 50.0% | |
| TAGTTAGTGAGGCGTGGTAC+TGG | - | chr5.3:51394908-51394927 | MS.gene043881:intron | 50.0% | |
| TGAGCTGGCAAGTTAGAGAG+TGG | - | chr5.3:51392708-51392727 | MS.gene043881:intron | 50.0% | |
| TGGCAAGTTAGAGAGTGGAG+GGG | - | chr5.3:51392713-51392732 | MS.gene043881:intron | 50.0% | |
| TGTGGAAATGTCCTGCCTGA+TGG | - | chr5.3:51394222-51394241 | MS.gene043881:intron | 50.0% | |
| TTGGAGAGGAAATGGTGAGC+TGG | - | chr5.3:51392693-51392712 | MS.gene043881:intron | 50.0% | |
| TTTGCGTGCTGTGATCACTG+AGG | - | chr5.3:51391587-51391606 | MS.gene043881:intron | 50.0% | |
| ! | CACGTGAGAGGGAGTATAAG+AGG | - | chr5.3:51391400-51391419 | MS.gene043881:intron | 50.0% |
| ! | CATACCTCATCTGGAGTGAC+TGG | + | chr5.3:51394399-51394418 | None:intergenic | 50.0% |
| ! | CTCATGGTGCTGAAACACAC+TGG | - | chr5.3:51391645-51391664 | MS.gene043881:CDS | 50.0% |
| ! | CTCTGAGGAGCTTATGCTCT+GGG | - | chr5.3:51391487-51391506 | MS.gene043881:intron | 50.0% |
| ! | GCTGGTTTCTTACGCACAAG+TGG | - | chr5.3:51392050-51392069 | MS.gene043881:intron | 50.0% |
| ! | TCTCTGAGGAGCTTATGCTC+TGG | - | chr5.3:51391486-51391505 | MS.gene043881:intron | 50.0% |
| ! | TGATCTGCAGCTTTGGTGGT+TGG | + | chr5.3:51394369-51394388 | None:intergenic | 50.0% |
| !! | GATCTTTGGGAGCATCAGGA+AGG | + | chr5.3:51395699-51395718 | None:intergenic | 50.0% |
| !! | TTGACTGGCTTTGCAGCAAG+TGG | - | chr5.3:51395162-51395181 | MS.gene043881:intron | 50.0% |
| ATGATCAGTGATGCTGGGCC+TGG | - | chr5.3:51394732-51394751 | MS.gene043881:intron | 55.0% | |
| CAAAACTCTTGGGCGCGTGA+CGG | - | chr5.3:51391768-51391787 | MS.gene043881:intron | 55.0% | |
| CAATATAAGGCCGTGGTCCG+AGG | + | chr5.3:51395188-51395207 | None:intergenic | 55.0% | |
| CCATCGACCAACCAGGTAGA+AGG | + | chr5.3:51393099-51393118 | None:intergenic | 55.0% | |
| CGTTCCAGTCACTCCAGATG+AGG | - | chr5.3:51394392-51394411 | MS.gene043881:intron | 55.0% | |
| CTCGATTCTCACCATCAGGC+AGG | + | chr5.3:51394236-51394255 | None:intergenic | 55.0% | |
| GAGGGGAAATACTCGCGAGA+GGG | - | chr5.3:51392730-51392749 | MS.gene043881:CDS | 55.0% | |
| GAGGTGTGTACGAGGGAAAG+AGG | - | chr5.3:51391419-51391438 | MS.gene043881:intron | 55.0% | |
| GAGGTGTGTAGGAGGGAAAG+AGG | - | chr5.3:51392760-51392779 | MS.gene043881:CDS | 55.0% | |
| GCTGGCAAGTTAGAGAGTGG+AGG | - | chr5.3:51392711-51392730 | MS.gene043881:intron | 55.0% | |
| GGAGGGGATATACACGTGAG+AGG | - | chr5.3:51391388-51391407 | MS.gene043881:intron | 55.0% | |
| TTGGAGAGGAAGTGGTGAGC+TGG | - | chr5.3:51391348-51391367 | MS.gene043881:intron | 55.0% | |
| ! | CCTTCTACCTGGTTGGTCGA+TGG | - | chr5.3:51393096-51393115 | MS.gene043881:intron | 55.0% |
| ! | CTCGCGAGAGGGAGTATAAG+AGG | - | chr5.3:51392741-51392760 | MS.gene043881:CDS | 55.0% |
| ! | CTCGGACCACGGCCTTATAT+TGG | - | chr5.3:51395186-51395205 | MS.gene043881:intron | 55.0% |
| ! | GGTGCTGAAACACACTGGCT+CGG | - | chr5.3:51391650-51391669 | MS.gene043881:CDS | 55.0% |
| ! | GTCGTGATCTGCAGCTTTGG+TGG | + | chr5.3:51394373-51394392 | None:intergenic | 55.0% |
| ! | TGGCTTGGCGGTATGTCTAC+TGG | - | chr5.3:51395731-51395750 | MS.gene043881:CDS | 55.0% |
| CTTGGGCGCGTGACGGTAAT+GGG | - | chr5.3:51391775-51391794 | MS.gene043881:CDS | 60.0% | |
| GCGGTATGTCTACTGGCCCT+TGG | - | chr5.3:51395738-51395757 | MS.gene043881:CDS | 60.0% | |
| GGAGGGGAAATACTCGCGAG+AGG | - | chr5.3:51392729-51392748 | MS.gene043881:CDS | 60.0% | |
| GGCTTTGCAGCAAGTGGCCT+CGG | - | chr5.3:51395168-51395187 | MS.gene043881:intron | 60.0% | |
| TCTTGGGCGCGTGACGGTAA+TGG | - | chr5.3:51391774-51391793 | MS.gene043881:CDS | 60.0% | |
| !! | GAAACACACTGGCTCGGTGG+AGG | - | chr5.3:51391656-51391675 | MS.gene043881:CDS | 60.0% |
| !! | GCTGAAACACACTGGCTCGG+TGG | - | chr5.3:51391653-51391672 | MS.gene043881:CDS | 60.0% |
| CAGCAAGTGGCCTCGGACCA+CGG | - | chr5.3:51395175-51395194 | MS.gene043881:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 51390161 | 51395855 | 51390161 | ID=MS.gene043881 |
| chr5.3 | mRNA | 51390161 | 51395855 | 51390161 | ID=MS.gene043881.t1;Parent=MS.gene043881 |
| chr5.3 | exon | 51395673 | 51395855 | 51395673 | ID=MS.gene043881.t1.exon1;Parent=MS.gene043881.t1 |
| chr5.3 | CDS | 51395673 | 51395855 | 51395673 | ID=cds.MS.gene043881.t1;Parent=MS.gene043881.t1 |
| chr5.3 | exon | 51395396 | 51395497 | 51395396 | ID=MS.gene043881.t1.exon2;Parent=MS.gene043881.t1 |
| chr5.3 | CDS | 51395396 | 51395497 | 51395396 | ID=cds.MS.gene043881.t1;Parent=MS.gene043881.t1 |
| chr5.3 | exon | 51392716 | 51392845 | 51392716 | ID=MS.gene043881.t1.exon3;Parent=MS.gene043881.t1 |
| chr5.3 | CDS | 51392716 | 51392845 | 51392716 | ID=cds.MS.gene043881.t1;Parent=MS.gene043881.t1 |
| chr5.3 | exon | 51391773 | 51391865 | 51391773 | ID=MS.gene043881.t1.exon4;Parent=MS.gene043881.t1 |
| chr5.3 | CDS | 51391773 | 51391865 | 51391773 | ID=cds.MS.gene043881.t1;Parent=MS.gene043881.t1 |
| chr5.3 | exon | 51391603 | 51391691 | 51391603 | ID=MS.gene043881.t1.exon5;Parent=MS.gene043881.t1 |
| chr5.3 | CDS | 51391603 | 51391691 | 51391603 | ID=cds.MS.gene043881.t1;Parent=MS.gene043881.t1 |
| chr5.3 | exon | 51390928 | 51391008 | 51390928 | ID=MS.gene043881.t1.exon6;Parent=MS.gene043881.t1 |
| chr5.3 | CDS | 51390928 | 51391008 | 51390928 | ID=cds.MS.gene043881.t1;Parent=MS.gene043881.t1 |
| chr5.3 | exon | 51390749 | 51390838 | 51390749 | ID=MS.gene043881.t1.exon7;Parent=MS.gene043881.t1 |
| chr5.3 | CDS | 51390749 | 51390838 | 51390749 | ID=cds.MS.gene043881.t1;Parent=MS.gene043881.t1 |
| chr5.3 | exon | 51390558 | 51390647 | 51390558 | ID=MS.gene043881.t1.exon8;Parent=MS.gene043881.t1 |
| chr5.3 | CDS | 51390558 | 51390647 | 51390558 | ID=cds.MS.gene043881.t1;Parent=MS.gene043881.t1 |
| chr5.3 | exon | 51390405 | 51390455 | 51390405 | ID=MS.gene043881.t1.exon9;Parent=MS.gene043881.t1 |
| chr5.3 | CDS | 51390405 | 51390455 | 51390405 | ID=cds.MS.gene043881.t1;Parent=MS.gene043881.t1 |
| chr5.3 | exon | 51390161 | 51390322 | 51390161 | ID=MS.gene043881.t1.exon10;Parent=MS.gene043881.t1 |
| chr5.3 | CDS | 51390161 | 51390322 | 51390161 | ID=cds.MS.gene043881.t1;Parent=MS.gene043881.t1 |
| Gene Sequence |
| Protein sequence |
