AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene044048

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene044048.t1 MTR_1g019410 97.634 465 11 0 1 465 1 465 0.0 941
MS.gene044048.t1 MTR_4g086130 67.857 448 139 3 22 466 20 465 0.0 640
MS.gene044048.t1 MTR_4g086040 67.261 449 142 4 21 466 23 469 0.0 631
MS.gene044048.t1 MTR_8g072260 55.531 461 189 6 6 463 12 459 0.0 534
MS.gene044048.t1 MTR_5g025610 55.388 464 193 6 5 463 3 457 0.0 527
MS.gene044048.t1 MTR_8g072260 54.897 439 182 6 6 441 12 437 2.40e-177 505
MS.gene044048.t1 MTR_5g025610 54.977 442 185 6 5 441 3 435 1.09e-175 501
MS.gene044048.t1 MTR_1g037580 51.586 473 217 5 1 469 12 476 1.64e-164 473
MS.gene044048.t1 MTR_5g025610 52.683 410 180 6 5 409 3 403 2.46e-149 432
MS.gene044048.t1 MTR_8g072260 52.632 399 173 6 6 401 12 397 5.12e-149 433
MS.gene044048.t1 MTR_6g034940 32.068 474 299 9 5 464 12 476 1.74e-86 274
MS.gene044048.t1 MTR_2g031930 31.915 470 303 10 8 465 20 484 7.96e-81 259
MS.gene044048.t1 MTR_8g077810 33.608 485 284 13 4 465 7 476 2.29e-78 253
MS.gene044048.t1 MTR_7g033040 33.860 443 275 9 9 440 7 442 5.36e-78 251
MS.gene044048.t1 MTR_2g031920 32.218 478 302 11 6 465 10 483 1.99e-77 250
MS.gene044048.t1 MTR_6g015910 31.963 438 285 9 35 467 33 462 1.41e-76 248
MS.gene044048.t1 MTR_5g082520 32.624 423 267 7 28 439 21 436 2.90e-76 247
MS.gene044048.t1 MTR_2g031930 32.135 445 285 10 8 440 16 455 4.47e-76 246
MS.gene044048.t1 MTR_8g016180 32.009 453 287 12 1 440 1 445 2.50e-74 242
MS.gene044048.t1 MTR_7g016040 30.876 434 290 7 35 465 33 459 7.89e-74 240
MS.gene044048.t1 MTR_3g007320 30.892 437 291 8 35 467 33 462 1.04e-73 240
MS.gene044048.t1 MTR_8g089800 31.924 473 306 8 6 465 16 485 2.13e-73 240
MS.gene044048.t1 MTR_5g091760 32.500 480 302 11 1 465 1 473 4.68e-73 239
MS.gene044048.t1 MTR_3g070380 32.536 418 262 7 34 438 28 438 2.34e-72 237
MS.gene044048.t1 MTR_8g100135 30.867 473 310 8 3 465 8 473 2.38e-71 234
MS.gene044048.t1 MTR_5g020020 31.887 461 294 9 2 447 3 458 4.32e-71 234
MS.gene044048.t1 MTR_0045s0070 31.868 455 293 10 23 467 28 475 4.15e-70 231
MS.gene044048.t1 MTR_0045s0060 29.449 472 314 11 8 467 11 475 3.12e-69 229
MS.gene044048.t1 MTR_3g467140 30.621 467 311 6 9 464 8 472 3.04e-68 226
MS.gene044048.t1 MTR_5g092150 31.473 448 291 6 27 462 21 464 3.12e-68 226
MS.gene044048.t1 MTR_5g014250 31.198 484 313 11 1 465 4 486 2.09e-66 221
MS.gene044048.t1 MTR_5g021220 31.466 464 285 10 6 442 7 464 1.20e-65 219
MS.gene044048.t1 MTR_3g467130 30.512 449 300 6 28 465 26 473 1.22e-65 219
MS.gene044048.t1 MTR_0045s0070 32.477 428 272 10 23 440 28 448 1.65e-65 218
MS.gene044048.t1 MTR_3g112120 31.130 469 307 8 9 465 16 480 1.85e-64 216
MS.gene044048.t1 MTR_8g076940 30.682 440 296 5 7 439 17 454 5.43e-64 215
MS.gene044048.t1 MTR_8g016180 30.714 420 271 11 1 408 1 412 2.04e-63 211
MS.gene044048.t1 MTR_5g014240 31.546 485 309 12 1 465 4 485 1.06e-62 212
MS.gene044048.t1 MTR_5g010750 29.882 425 286 7 25 440 21 442 7.84e-62 208
MS.gene044048.t1 MTR_5g010750 29.882 425 286 7 25 440 21 442 2.67e-61 208
MS.gene044048.t1 MTR_4g005230 31.111 450 291 10 29 465 37 480 4.08e-61 207
MS.gene044048.t1 MTR_0045s0060 30.250 400 270 8 70 467 1 393 1.04e-60 204
MS.gene044048.t1 MTR_8g076510 29.808 416 277 8 36 440 40 451 1.28e-60 206
MS.gene044048.t1 MTR_8g012970 30.625 480 308 14 1 465 13 482 3.08e-60 205
MS.gene044048.t1 MTR_8g089190 28.700 446 297 6 35 465 1 440 2.11e-57 197
MS.gene044048.t1 MTR_6g069000 28.256 453 304 8 2 440 7 452 6.97e-56 193
MS.gene044048.t1 MTR_6g069000 28.256 453 304 8 2 440 17 462 1.04e-55 192
MS.gene044048.t1 MTR_1g032950 29.241 448 288 9 27 461 35 466 5.38e-55 191
MS.gene044048.t1 MTR_8g076940 30.024 413 278 6 7 410 17 427 5.47e-54 187
MS.gene044048.t1 MTR_7g016040 30.120 332 225 5 35 365 33 358 7.33e-53 182
MS.gene044048.t1 MTR_0045s0080 30.334 389 248 8 23 401 28 403 4.36e-52 181
MS.gene044048.t1 MTR_3g467140 32.733 333 216 4 139 464 8 339 1.21e-51 179
MS.gene044048.t1 MTR_5g020020 32.132 333 211 6 143 465 75 402 1.09e-45 164
MS.gene044048.t1 MTR_8g100135 27.344 384 263 7 3 377 8 384 2.77e-43 158
MS.gene044048.t1 MTR_8g076940 28.962 366 251 5 7 365 17 380 1.43e-41 153
MS.gene044048.t1 MTR_8g076940 28.962 366 251 5 7 365 17 380 1.46e-41 152
MS.gene044048.t1 MTR_1g032980 30.375 293 193 5 35 317 16 307 7.53e-34 132
MS.gene044048.t1 MTR_8g089190 26.062 353 242 5 35 374 1 347 1.88e-32 127
MS.gene044048.t1 MTR_8g006450 25.885 452 292 16 26 456 32 461 5.05e-32 128
MS.gene044048.t1 MTR_1g035140 27.594 453 287 17 1 420 1 445 1.21e-27 115
MS.gene044048.t1 MTR_8g006495 29.615 260 155 8 210 456 104 348 8.19e-25 106
MS.gene044048.t1 MTR_8g008530 24.574 411 279 11 64 448 92 497 1.59e-24 107
MS.gene044048.t1 MTR_4g071710 25.646 542 315 22 1 480 1 516 7.54e-24 104
MS.gene044048.t1 MTR_0147s0030 24.221 417 269 14 65 448 107 509 2.49e-23 103
MS.gene044048.t1 MTR_4g029690 26.263 297 203 7 27 312 35 326 4.61e-23 100
MS.gene044048.t1 MTR_7g055793 23.684 418 272 14 64 448 44 447 8.38e-23 101
MS.gene044048.t1 MTR_7g055793 23.684 418 272 14 64 448 99 502 1.55e-22 100
MS.gene044048.t1 MTR_8g466180 25.160 469 300 18 10 435 5 465 1.96e-22 100
MS.gene044048.t1 MTR_3g058110 25.109 458 288 18 7 420 4 450 1.14e-21 98.2
MS.gene044048.t1 MTR_2g065360 24.215 446 291 14 34 443 6 440 3.49e-21 96.7
MS.gene044048.t1 MTR_5g021390 23.617 470 307 14 10 443 28 481 1.28e-20 95.1
MS.gene044048.t1 MTR_5g019010 23.591 479 322 16 1 443 1 471 2.40e-20 94.4
MS.gene044048.t1 MTR_2g019640 24.601 439 275 14 35 437 41 459 2.76e-20 94.0
MS.gene044048.t1 MTR_6g022450 23.279 494 297 19 8 443 11 480 3.91e-20 93.6
MS.gene044048.t1 MTR_8g469360 25.907 386 240 15 95 448 31 402 5.79e-20 92.4
MS.gene044048.t1 MTR_0059s0170 23.711 485 305 16 1 439 1 466 8.37e-20 92.4
MS.gene044048.t1 MTR_3g057980 24.342 456 294 17 1 420 1 441 9.16e-20 92.4
MS.gene044048.t1 MTR_5g018980 24.625 467 280 17 29 443 28 474 4.70e-19 90.1
MS.gene044048.t1 MTR_5g073020 24.888 446 290 16 35 443 33 470 6.66e-19 89.7
MS.gene044048.t1 MTR_3g057970 23.947 451 288 17 8 420 3 436 9.85e-19 89.4
MS.gene044048.t1 MTR_1g035190 24.401 459 277 17 27 435 12 450 1.06e-18 89.0
MS.gene044048.t1 MTR_3g104560 30.738 244 141 7 213 439 271 503 1.22e-18 89.0
MS.gene044048.t1 MTR_3g104560 30.738 244 141 7 213 439 136 368 1.41e-18 88.2
MS.gene044048.t1 MTR_8g080520 25.546 458 284 20 7 424 38 478 2.10e-18 88.2
MS.gene044048.t1 MTR_3g057860 23.799 437 294 15 16 420 18 447 2.13e-18 88.2
MS.gene044048.t1 MTR_3g057910 24.017 458 299 17 24 444 27 472 2.35e-18 88.2
MS.gene044048.t1 MTR_5g094540 24.099 444 296 13 11 424 17 449 2.42e-18 88.2
MS.gene044048.t1 MTR_8g012590 25.277 451 298 17 24 443 27 469 3.16e-18 87.8
MS.gene044048.t1 MTR_0171s0020 23.093 472 300 13 1 424 1 457 4.72e-18 87.0
MS.gene044048.t1 MTR_5g095260 24.779 452 294 17 21 439 27 465 6.59e-18 86.7
MS.gene044048.t1 MTR_3g076560 23.701 481 302 18 1 439 22 479 8.90e-18 86.3
MS.gene044048.t1 MTR_1g442730 25.664 452 297 17 1 420 1 445 9.73e-18 86.3
MS.gene044048.t1 MTR_3g058400 24.558 452 293 18 10 421 5 448 2.42e-17 85.1
MS.gene044048.t1 MTR_5g072980 24.887 442 295 14 35 443 33 470 3.26e-17 84.7
MS.gene044048.t1 MTR_5g072930 24.887 442 295 14 35 443 33 470 3.26e-17 84.7
MS.gene044048.t1 MTR_7g075610 22.432 477 309 16 10 439 5 467 3.48e-17 84.3
MS.gene044048.t1 MTR_6g462640 23.690 477 301 20 8 435 3 465 3.93e-17 84.3
MS.gene044048.t1 MTR_4g088195 25.746 268 166 9 227 475 245 498 4.27e-17 84.3
MS.gene044048.t1 MTR_3g058390 21.983 464 326 15 7 439 7 465 4.31e-17 84.3
MS.gene044048.t1 MTR_3g058240 25.416 421 272 18 35 421 1 413 5.00e-17 84.0
MS.gene044048.t1 MTR_3g058250 22.766 470 314 18 8 435 3 465 6.06e-17 83.6
MS.gene044048.t1 MTR_4g048580 23.112 437 301 17 11 420 17 445 6.18e-17 83.6
MS.gene044048.t1 MTR_8g046210 23.480 477 282 19 3 424 7 455 6.43e-17 83.6
MS.gene044048.t1 MTR_5g095290 23.617 470 312 15 3 439 9 464 6.94e-17 83.6
MS.gene044048.t1 MTR_3g057900 23.282 451 297 16 8 420 3 442 7.87e-17 83.2
MS.gene044048.t1 MTR_3g058000 22.973 444 301 15 11 420 14 450 8.72e-17 83.2
MS.gene044048.t1 MTR_6g017325 27.007 274 177 8 214 474 244 507 1.11e-16 82.8
MS.gene044048.t1 MTR_5g094840 24.943 437 298 15 10 420 19 451 1.52e-16 82.4
MS.gene044048.t1 MTR_8g076290 22.248 427 284 11 33 420 33 450 1.87e-16 82.4
MS.gene044048.t1 MTR_6g035115 24.419 430 273 15 27 420 29 442 2.29e-16 82.0
MS.gene044048.t1 MTR_5g095220 22.727 418 269 13 31 420 24 415 3.37e-16 81.3
MS.gene044048.t1 MTR_5g094550 23.009 452 300 13 8 424 11 449 4.34e-16 80.9
MS.gene044048.t1 MTR_7g012860 23.568 454 304 13 25 443 23 468 5.12e-16 80.9
MS.gene044048.t1 MTR_0287s0060 23.568 454 304 13 25 443 23 468 5.12e-16 80.9
MS.gene044048.t1 MTR_1g107295 27.132 258 152 8 220 450 241 489 6.02e-16 80.9
MS.gene044048.t1 MTR_3g058060 23.348 454 309 15 1 420 1 449 7.67e-16 80.5
MS.gene044048.t1 MTR_3g057800 23.266 447 297 17 11 420 7 444 8.75e-16 80.1
MS.gene044048.t1 MTR_2g010530 24.424 434 284 14 24 425 23 444 9.29e-16 80.1
MS.gene044048.t1 MTR_5g094520 23.620 453 287 16 11 424 48 480 1.07e-15 80.1
MS.gene044048.t1 MTR_7g092620 23.377 462 294 14 9 424 8 455 1.11e-15 79.7
MS.gene044048.t1 MTR_5g016410 22.727 484 305 15 5 445 6 463 1.13e-15 79.7
MS.gene044048.t1 MTR_2g073420 24.798 496 317 18 6 460 15 495 1.22e-15 79.7
MS.gene044048.t1 MTR_4g104550 22.517 453 309 17 32 451 25 468 2.10e-15 79.0
MS.gene044048.t1 MTR_0457s0020 29.187 209 141 6 100 306 17 220 2.26e-15 75.5
MS.gene044048.t1 MTR_5g014230 39.759 83 49 1 384 465 2 84 2.81e-15 72.0
MS.gene044048.t1 MTR_4g088160 25.306 245 160 8 227 453 245 484 3.10e-15 78.6
MS.gene044048.t1 MTR_3g093530 22.673 419 285 14 59 447 92 501 3.32e-15 78.6
MS.gene044048.t1 MTR_4g088170 25.403 248 158 8 227 453 245 486 3.40e-15 78.2
MS.gene044048.t1 MTR_3g076530 23.355 471 326 16 1 443 8 471 4.73e-15 77.8
MS.gene044048.t1 MTR_2g437840 22.826 460 293 16 5 424 5 442 7.80e-15 77.0
MS.gene044048.t1 MTR_3g058210 23.261 460 311 16 12 435 14 467 1.41e-14 76.3
MS.gene044048.t1 MTR_8g091690 22.517 453 303 17 9 436 6 435 2.14e-14 75.9
MS.gene044048.t1 MTR_5g073230 22.459 423 284 16 24 420 30 434 2.66e-14 75.5
MS.gene044048.t1 MTR_6g008650 23.400 500 307 20 1 439 1 485 3.47e-14 75.1
MS.gene044048.t1 MTR_1g107300 27.419 186 114 4 277 450 1 177 4.59e-14 71.6
MS.gene044048.t1 MTR_5g016440 21.766 487 303 16 5 445 6 460 9.58e-14 73.6
MS.gene044048.t1 MTR_5g009110 23.963 217 127 5 264 446 185 397 2.24e-13 72.4
MS.gene044048.t1 MTR_7g006900 27.572 243 156 7 215 443 209 445 2.82e-13 72.0
MS.gene044048.t1 MTR_2g023680 21.739 437 286 13 43 448 85 496 3.50e-13 72.0
MS.gene044048.t1 MTR_1g055325 23.353 501 321 17 6 465 25 503 3.56e-13 72.0
MS.gene044048.t1 MTR_5g009110 23.963 217 127 5 264 446 333 545 4.98e-13 71.6
MS.gene044048.t1 MTR_8g020960 23.011 465 287 19 10 424 12 455 5.48e-13 71.2
MS.gene044048.t1 MTR_1g097220 21.465 396 268 12 80 440 109 496 7.70e-13 70.9
MS.gene044048.t1 MTR_8g042020 23.214 392 259 13 104 461 132 515 1.57e-12 70.1
MS.gene044048.t1 MTR_8g073950 26.606 218 146 6 232 439 272 485 1.74e-12 69.7
MS.gene044048.t1 MTR_5g045250 22.803 421 286 15 51 440 73 485 2.18e-12 69.7
MS.gene044048.t1 MTR_5g073250 23.007 439 298 15 13 420 16 445 2.33e-12 69.3
MS.gene044048.t1 MTR_5g007450 26.126 222 148 6 228 439 246 461 2.80e-12 69.3
MS.gene044048.t1 MTR_1g085680 21.698 424 272 13 81 463 106 510 3.40e-12 68.9
MS.gene044048.t1 MTR_1g062190 22.500 440 296 15 60 462 101 532 4.01e-12 68.9
MS.gene044048.t1 MTR_6g084770 21.941 474 320 17 8 443 12 473 4.01e-12 68.6
MS.gene044048.t1 MTR_5g007550 26.126 222 148 6 228 439 246 461 4.12e-12 68.6
MS.gene044048.t1 MTR_8g098565 23.023 430 277 12 59 444 58 477 4.18e-12 68.6
MS.gene044048.t1 MTR_7g012330 25.571 219 150 4 232 443 255 467 4.35e-12 68.6
MS.gene044048.t1 MTR_7g075600 24.528 477 311 17 1 439 1 466 4.99e-12 68.6
MS.gene044048.t1 MTR_8g073960 26.606 218 146 6 232 439 276 489 5.50e-12 68.2
MS.gene044048.t1 MTR_2g072260 21.429 434 291 12 43 448 78 489 5.77e-12 68.2
MS.gene044048.t1 MTR_5g095230 23.529 425 268 14 43 433 81 482 8.18e-12 67.8
MS.gene044048.t1 MTR_7g098550 24.566 403 272 14 67 447 90 482 8.62e-12 67.8
MS.gene044048.t1 MTR_7g098550 24.242 396 274 13 67 447 90 474 9.27e-12 67.4
MS.gene044048.t1 MTR_5g073320 21.378 421 296 13 29 420 32 446 9.94e-12 67.4
MS.gene044048.t1 MTR_4g035330 26.425 193 136 4 233 424 243 430 1.06e-11 67.4
MS.gene044048.t1 MTR_8g076372 25.806 217 136 5 232 439 276 476 1.29e-11 67.0
MS.gene044048.t1 MTR_2g072340 22.102 371 248 11 110 448 133 494 1.37e-11 67.0
MS.gene044048.t1 MTR_4g077210 24.229 227 161 6 227 446 251 473 1.41e-11 67.0
MS.gene044048.t1 MTR_4g133750 21.250 480 316 15 6 443 12 471 1.43e-11 67.0
MS.gene044048.t1 MTR_3g076550 26.147 218 130 8 229 436 249 445 1.47e-11 67.0
MS.gene044048.t1 MTR_4g104570 25.140 179 125 3 279 451 1 176 1.80e-11 63.9
MS.gene044048.t1 MTR_1g037370 24.454 229 158 7 228 446 242 465 1.98e-11 66.6
MS.gene044048.t1 MTR_4g113650 22.145 429 297 13 59 459 86 505 2.15e-11 66.6
MS.gene044048.t1 MTR_7g075580 26.244 221 151 6 227 439 250 466 3.23e-11 65.9
MS.gene044048.t1 MTR_1g070365 21.756 501 293 21 8 441 5 473 3.42e-11 65.9
MS.gene044048.t1 MTR_2g437880 26.020 196 141 3 231 425 256 448 3.47e-11 65.9
MS.gene044048.t1 MTR_4g104540 24.725 182 128 3 276 451 229 407 3.51e-11 65.5
MS.gene044048.t1 MTR_3g025260 27.642 246 158 8 213 443 234 474 3.81e-11 65.5
MS.gene044048.t1 MTR_4g088400 23.007 439 287 22 25 420 35 465 5.81e-11 65.1
MS.gene044048.t1 MTR_4g095050 22.059 476 280 20 7 425 6 447 6.00e-11 65.1
MS.gene044048.t1 MTR_3g025230 28.745 247 154 9 213 443 234 474 7.00e-11 64.7
MS.gene044048.t1 MTR_4g062500 25.498 251 160 7 220 447 238 484 7.63e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene044048.t1 AT3G19270 66.970 439 141 3 27 464 26 461 0.0 624
MS.gene044048.t1 AT3G19270 66.988 415 133 3 27 440 26 437 0.0 593
MS.gene044048.t1 AT4G19230 55.844 462 189 5 9 463 3 456 0.0 554
MS.gene044048.t1 AT5G45340 56.751 437 181 3 27 463 28 456 0.0 550
MS.gene044048.t1 AT4G19230 52.599 481 206 7 9 481 3 469 0.0 527
MS.gene044048.t1 AT5G45340 56.386 415 173 3 27 441 28 434 0.0 521
MS.gene044048.t1 AT2G29090 54.751 442 189 5 29 465 43 478 2.22e-173 496
MS.gene044048.t1 AT2G29090 54.751 442 189 5 29 465 43 478 2.22e-173 496
MS.gene044048.t1 AT2G29090 53.728 389 169 5 82 465 1 383 7.69e-146 422
MS.gene044048.t1 AT2G29090 51.237 283 134 3 29 310 43 322 3.44e-92 284
MS.gene044048.t1 AT1G05160 33.482 448 283 8 35 469 45 490 1.86e-84 269
MS.gene044048.t1 AT1G05160 33.482 448 283 8 35 469 45 490 1.86e-84 269
MS.gene044048.t1 AT2G32440 32.135 473 301 8 11 465 13 483 6.11e-80 257
MS.gene044048.t1 AT2G32440 32.135 473 301 8 11 465 13 483 6.11e-80 257
MS.gene044048.t1 AT5G05690 33.184 446 280 7 5 439 1 439 1.91e-72 237
MS.gene044048.t1 AT1G19630 32.914 477 303 10 5 470 6 476 5.74e-71 233
MS.gene044048.t1 AT5G38970 29.412 442 300 8 9 446 10 443 1.32e-70 232
MS.gene044048.t1 AT1G19630 33.184 446 282 9 5 440 6 445 6.38e-69 227
MS.gene044048.t1 AT3G30180 31.643 414 275 7 35 445 34 442 1.85e-68 226
MS.gene044048.t1 AT5G36110 33.408 446 275 10 35 465 34 472 3.92e-66 221
MS.gene044048.t1 AT3G50660 30.909 495 273 13 25 465 29 508 1.46e-64 217
MS.gene044048.t1 AT3G13730 31.591 421 268 10 34 440 50 464 4.34e-64 215
MS.gene044048.t1 AT1G12740 28.571 448 299 7 9 444 8 446 4.99e-64 215
MS.gene044048.t1 AT3G13730 31.591 421 268 10 34 440 50 464 9.01e-64 215
MS.gene044048.t1 AT5G38970 29.723 397 269 7 9 403 10 398 2.38e-63 212
MS.gene044048.t1 AT4G36380 31.829 421 266 11 35 439 69 484 2.31e-62 212
MS.gene044048.t1 AT1G12740 28.194 454 299 8 9 444 8 452 3.95e-62 210
MS.gene044048.t1 AT5G05690 32.258 403 259 5 5 400 1 396 4.69e-62 208
MS.gene044048.t1 AT1G12740 28.414 454 298 8 9 444 8 452 7.88e-62 209
MS.gene044048.t1 AT1G19630 33.088 408 257 9 5 402 6 407 1.16e-58 200
MS.gene044048.t1 AT2G42850 29.792 480 311 12 4 465 8 479 5.92e-58 199
MS.gene044048.t1 AT1G55940 28.982 452 300 12 4 439 17 463 2.07e-56 194
MS.gene044048.t1 AT5G14400 30.769 416 247 13 40 441 1 389 4.54e-56 192
MS.gene044048.t1 AT1G55940 28.446 457 306 12 4 444 17 468 5.53e-56 194
MS.gene044048.t1 AT5G14400 30.622 418 249 13 40 443 1 391 9.94e-56 191
MS.gene044048.t1 AT5G38970 28.650 363 250 6 87 445 4 361 1.66e-52 182
MS.gene044048.t1 AT5G38970 28.650 363 250 6 87 445 4 361 1.66e-52 182
MS.gene044048.t1 AT1G78490 29.551 423 284 8 33 444 33 452 7.50e-52 182
MS.gene044048.t1 AT5G48000 28.726 463 293 13 30 470 30 477 2.11e-51 181
MS.gene044048.t1 AT5G48000 28.726 463 293 13 30 470 30 477 2.11e-51 181
MS.gene044048.t1 AT5G48000 28.726 463 293 13 30 470 30 477 2.11e-51 181
MS.gene044048.t1 AT5G48000 28.726 463 293 13 30 470 30 477 2.11e-51 181
MS.gene044048.t1 AT5G48000 28.726 463 293 13 30 470 30 477 2.11e-51 181
MS.gene044048.t1 AT5G48000 28.726 463 293 13 30 470 30 477 2.11e-51 181
MS.gene044048.t1 AT1G65670 29.864 442 284 11 5 435 8 434 3.86e-51 181
MS.gene044048.t1 AT5G48000 28.571 455 304 12 30 470 71 518 7.27e-51 181
MS.gene044048.t1 AT1G73340 26.786 448 300 7 5 440 21 452 2.71e-50 179
MS.gene044048.t1 AT3G44970 28.873 426 287 9 30 443 30 451 4.92e-50 178
MS.gene044048.t1 AT3G50660 29.782 413 243 10 25 400 29 431 1.53e-49 176
MS.gene044048.t1 AT4G15393 28.894 443 288 13 6 435 9 437 1.95e-49 176
MS.gene044048.t1 AT5G05690 32.515 326 206 6 121 439 2 320 2.60e-49 172
MS.gene044048.t1 AT4G15300 29.241 448 283 16 5 435 8 438 1.06e-46 169
MS.gene044048.t1 AT4G15300 29.213 445 281 16 8 435 1 428 1.89e-46 168
MS.gene044048.t1 AT4G15396 27.149 442 299 11 6 435 9 439 7.45e-44 161
MS.gene044048.t1 AT4G15396 27.149 442 299 11 6 435 9 439 8.85e-44 160
MS.gene044048.t1 AT1G12740 26.087 368 254 6 9 367 8 366 1.71e-42 155
MS.gene044048.t1 AT1G78490 29.134 381 251 8 33 401 33 406 2.40e-42 155
MS.gene044048.t1 AT5G14400 29.650 371 226 11 91 452 2 346 6.91e-42 153
MS.gene044048.t1 AT4G15300 27.837 467 281 18 8 435 1 450 1.67e-40 152
MS.gene044048.t1 AT4G15393 27.901 405 269 12 6 401 9 399 8.00e-40 148
MS.gene044048.t1 AT4G36380 30.029 343 223 9 35 365 69 406 3.39e-39 147
MS.gene044048.t1 AT5G14400 29.499 339 217 11 40 365 1 330 1.84e-38 143
MS.gene044048.t1 AT5G36110 29.745 353 228 8 35 374 34 379 2.04e-37 141
MS.gene044048.t1 AT4G15396 26.351 444 279 13 6 435 9 418 3.00e-36 139
MS.gene044048.t1 AT4G15396 25.990 404 280 10 6 401 9 401 2.77e-35 136
MS.gene044048.t1 AT2G42850 28.792 389 251 12 4 374 8 388 5.06e-35 135
MS.gene044048.t1 AT4G15310 27.171 449 304 12 4 440 8 445 1.38e-34 135
MS.gene044048.t1 AT5G36130 47.407 135 69 2 333 465 1 135 9.56e-32 119
MS.gene044048.t1 AT4G15393 25.310 403 247 11 6 400 9 365 4.52e-30 120
MS.gene044048.t1 AT1G11680 23.950 476 325 15 8 461 16 476 4.55e-30 122
MS.gene044048.t1 AT3G30290 25.269 372 263 8 71 435 5 368 3.93e-29 119
MS.gene044048.t1 AT4G13770 25.316 474 316 13 1 443 1 467 4.98e-28 117
MS.gene044048.t1 AT5G36140 27.465 284 189 9 35 308 33 309 1.27e-24 104
MS.gene044048.t1 AT5G25120 26.782 519 306 23 4 475 2 493 3.40e-22 99.8
MS.gene044048.t1 AT3G44970 25.150 334 237 8 30 354 30 359 1.29e-21 96.7
MS.gene044048.t1 AT2G45560 22.803 478 308 16 8 439 9 471 8.33e-21 95.5
MS.gene044048.t1 AT5G67310 25.684 475 307 22 1 442 8 469 1.26e-20 95.1
MS.gene044048.t1 AT5G57220 24.056 503 322 16 1 470 1 476 6.47e-20 92.8
MS.gene044048.t1 AT5G25140 26.797 459 272 20 4 420 2 438 8.16e-20 92.4
MS.gene044048.t1 AT5G25130 26.265 514 315 21 4 475 2 493 1.96e-19 91.3
MS.gene044048.t1 AT5G04330 23.982 442 286 14 36 436 33 465 5.69e-19 90.1
MS.gene044048.t1 AT4G37370 25.000 228 163 5 228 453 247 468 1.22e-17 85.9
MS.gene044048.t1 AT5G24910 20.602 432 301 11 44 439 76 501 5.80e-17 84.0
MS.gene044048.t1 AT4G37320 25.000 220 159 3 228 446 248 462 6.92e-17 83.6
MS.gene044048.t1 AT4G37340 26.250 240 161 6 212 445 232 461 7.29e-17 83.6
MS.gene044048.t1 AT2G34490 22.090 421 288 15 43 437 45 451 1.27e-16 82.8
MS.gene044048.t1 AT2G45570 25.424 472 294 19 12 439 15 472 1.34e-16 82.8
MS.gene044048.t1 AT1G74110 22.041 490 320 16 9 445 31 511 1.70e-16 82.4
MS.gene044048.t1 AT1G50520 23.589 496 323 18 1 451 6 490 1.80e-16 82.4
MS.gene044048.t1 AT4G37400 26.872 227 151 5 207 425 223 442 2.51e-16 82.0
MS.gene044048.t1 AT4G36220 23.125 480 307 11 2 436 14 476 4.33e-16 81.3
MS.gene044048.t1 AT2G45580 23.272 434 270 16 45 432 48 464 4.93e-16 80.9
MS.gene044048.t1 AT4G37430 23.044 473 309 18 10 444 9 464 5.30e-16 80.9
MS.gene044048.t1 AT2G45580 26.180 233 154 6 213 432 83 310 5.69e-16 79.7
MS.gene044048.t1 AT3G20940 22.199 473 318 12 19 451 26 488 7.92e-16 80.5
MS.gene044048.t1 AT2G26170 29.707 239 142 7 213 435 173 401 8.97e-16 79.7
MS.gene044048.t1 AT2G26170 29.707 239 142 7 213 435 256 484 9.79e-16 80.1
MS.gene044048.t1 AT4G37410 26.872 227 151 7 213 431 230 449 1.32e-15 79.7
MS.gene044048.t1 AT4G27710 24.603 378 248 11 116 464 143 512 2.51e-15 79.0
MS.gene044048.t1 AT2G34500 22.626 358 224 14 109 437 113 446 2.70e-15 78.6
MS.gene044048.t1 AT2G28850 22.190 347 239 8 109 437 114 447 2.70e-15 78.6
MS.gene044048.t1 AT4G37310 25.207 242 174 4 220 454 242 483 5.58e-15 77.8
MS.gene044048.t1 AT2G24180 23.866 419 280 13 35 420 36 448 6.09e-15 77.4
MS.gene044048.t1 AT1G66540 25.112 223 154 5 228 445 75 289 9.27e-15 75.9
MS.gene044048.t1 AT1G66540 25.112 223 154 5 228 445 134 348 1.32e-14 75.9
MS.gene044048.t1 AT2G45550 26.638 229 144 7 219 439 259 471 2.21e-14 75.9
MS.gene044048.t1 AT4G37360 27.322 183 127 3 265 445 283 461 2.35e-14 75.9
MS.gene044048.t1 AT3G28740 25.514 243 172 5 205 444 232 468 2.80e-14 75.5
MS.gene044048.t1 AT5G57260 21.882 425 298 12 28 420 23 445 1.68e-13 73.2
MS.gene044048.t1 AT3G53130 21.981 414 279 13 67 444 108 513 1.72e-13 73.2
MS.gene044048.t1 AT4G15110 23.502 217 128 3 264 446 341 553 2.65e-13 72.8
MS.gene044048.t1 AT3G52970 24.167 480 304 13 13 439 19 491 3.00e-13 72.4
MS.gene044048.t1 AT4G37330 24.658 219 159 4 228 445 245 458 6.57e-13 71.2
MS.gene044048.t1 AT2G22330 26.180 233 151 9 232 451 288 512 7.43e-13 71.2
MS.gene044048.t1 AT2G22330 26.180 233 151 9 232 451 311 535 8.07e-13 71.2
MS.gene044048.t1 AT3G52970 23.820 466 309 13 13 439 19 477 9.87e-13 70.9
MS.gene044048.t1 AT3G53300 22.851 442 269 16 34 424 27 447 1.69e-12 70.1
MS.gene044048.t1 AT3G26160 21.700 447 311 13 8 420 5 446 2.18e-12 69.7
MS.gene044048.t1 AT5G07990 20.954 482 326 15 7 446 5 473 2.33e-12 69.3
MS.gene044048.t1 AT1G64940 28.191 188 126 3 267 447 298 483 3.10e-12 68.9
MS.gene044048.t1 AT2G23190 23.482 247 178 6 203 445 266 505 5.25e-12 68.6
MS.gene044048.t1 AT3G26290 24.027 437 279 17 22 420 21 442 5.43e-12 68.2
MS.gene044048.t1 AT2G46950 23.077 416 274 13 64 447 146 547 6.20e-12 68.2
MS.gene044048.t1 AT3G26290 23.009 452 265 18 22 420 34 455 6.54e-12 68.2
MS.gene044048.t1 AT2G23220 21.818 220 164 4 228 445 263 476 1.07e-11 67.4
MS.gene044048.t1 AT5G36220 23.423 222 162 5 227 446 107 322 1.60e-11 66.2
MS.gene044048.t1 AT5G36220 23.423 222 162 5 227 446 253 468 1.86e-11 66.6
MS.gene044048.t1 AT3G48520 21.907 493 302 19 5 441 5 470 4.48e-11 65.5
MS.gene044048.t1 AT5G42580 22.488 418 265 13 66 445 70 466 7.11e-11 64.7
MS.gene044048.t1 AT1G75130 22.992 361 235 14 129 461 150 495 9.27e-11 64.3

Find 107 sgRNAs with CRISPR-Local

Find 242 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCAAATGGCATGAAAGTATT+TGG 0.142965 1.2:+4138596 None:intergenic
GGCATTGCTTTCCACCCTTT+TGG 0.171251 1.2:+4138795 None:intergenic
AGGGCTAAGGCTTCAATTTC+AGG 0.177274 1.2:+4140757 None:intergenic
GCTTATACCTTATAGGTAAT+TGG 0.207342 1.2:+4139280 None:intergenic
ATTAACTGCTTATACCTTAT+AGG 0.209223 1.2:+4139273 None:intergenic
AAGAGCTAAAGAAGAATTAT+TGG 0.218720 1.2:-4140276 MS.gene044048:CDS
CCAAATGATGGATCATAATA+AGG 0.218766 1.2:+4138525 None:intergenic
TCAGCTACTGCTTCTCTAAA+TGG 0.254249 1.2:+4139046 None:intergenic
GAAATTGGAGATAACATTAT+TGG 0.259111 1.2:-4139965 MS.gene044048:CDS
TTGGAGAAGAAGAAAAGATT+TGG 0.286221 1.2:+4141523 None:intergenic
AGAAGAAAAGATTTGGGTCT+TGG 0.292356 1.2:+4141530 None:intergenic
ATATTATCTGATGATGAAAT+TGG 0.294172 1.2:-4139980 MS.gene044048:CDS
CCCTTTCCACCATCAAATCT+TGG 0.312974 1.2:-4140738 MS.gene044048:CDS
ATGGTAAACTACAGCTGAAT+TGG 0.316888 1.2:-4139321 MS.gene044048:CDS
AAAGAACATAAATGAAAATA+AGG 0.325706 1.2:+4141645 None:intergenic
CCTTATTATGATCCATCATT+TGG 0.343940 1.2:-4138525 MS.gene044048:CDS
AAACATGCCAATTACCTATA+AGG 0.352173 1.2:-4139287 MS.gene044048:intron
GGCATGAAAGTATTTGGTTT+TGG 0.356492 1.2:+4138602 None:intergenic
CCAAATACTTTCATGCCATT+TGG 0.359912 1.2:-4138596 MS.gene044048:CDS
CCATTCAAAGGCAATGGAAA+TGG 0.361111 1.2:+4137928 None:intergenic
CCTTTCCACCATCAAATCTT+GGG 0.366162 1.2:-4140737 MS.gene044048:CDS
ATCATTTGGTCGTCAAGTTT+AGG 0.368718 1.2:-4138511 MS.gene044048:intron
CTTGAAGGGTTGAATTTATG+AGG 0.372482 1.2:+4138729 None:intergenic
ATATTCAAGACGAACATTCT+AGG 0.375299 1.2:-4140985 MS.gene044048:CDS
CACCAAAATGGATTCAACTT+TGG 0.379629 1.2:-4141695 None:intergenic
CCTCGATTCACTTCGCAACT+TGG 0.379709 1.2:-4140782 MS.gene044048:CDS
TCATTTCCAACTCAAATTCC+TGG 0.382346 1.2:-4140232 MS.gene044048:CDS
CCATTTCCATTGCCTTTGAA+TGG 0.384022 1.2:-4137928 MS.gene044048:CDS
TCACACTGTGGGATTCAATA+TGG 0.388946 1.2:-4137952 MS.gene044048:CDS
AAACTTCCTCCTGGTTCAAT+GGG 0.390178 1.2:-4141589 MS.gene044048:CDS
TTTACACATTCGAGAAGTTT+CGG 0.400562 1.2:+4139872 None:intergenic
ATTCAACCCTTCAAGATTTG+AGG 0.401761 1.2:-4138721 MS.gene044048:intron
TGGAGAAGAAGAAAAGATTT+GGG 0.403165 1.2:+4141524 None:intergenic
GAAGAAAAGATTTGGGTCTT+GGG 0.404022 1.2:+4141531 None:intergenic
AAAAGCAAAGAACGTTTGAT+TGG 0.407013 1.2:-4140877 MS.gene044048:CDS
AAAACTTCCTCCTGGTTCAA+TGG 0.407546 1.2:-4141590 MS.gene044048:CDS
CTTTGAATGGACTCCCAGCC+AGG 0.412377 1.2:-4137915 MS.gene044048:intron
TGGCAATGAGCTTGCTAAGC+TGG 0.415341 1.2:-4138552 MS.gene044048:CDS
GGTCTTGGGAGTAGAGTTGA+AGG 0.415849 1.2:+4141545 None:intergenic
GGAAATAATTAGTGAGAGGA+AGG 0.418556 1.2:-4140074 MS.gene044048:CDS
ATTCATACCTCAAATCTTGA+AGG 0.422368 1.2:+4138714 None:intergenic
ATCATCACCCCAAGATTTGA+TGG 0.427411 1.2:+4140729 None:intergenic
GTGAGTACCATTTGCGTTTG+AGG 0.428828 1.2:-4140828 MS.gene044048:CDS
TTTAGCTCTTCCCTCAACCT+TGG 0.449838 1.2:+4140289 None:intergenic
CAAATGATGGATCATAATAA+GGG 0.450882 1.2:+4138526 None:intergenic
GATTCTCTCCAACACCTGGC+TGG 0.454938 1.2:+4137901 None:intergenic
TGAAGGGTTTGTCCTATGTA+AGG 0.459592 1.2:+4141562 None:intergenic
GGGTTGAATTTATGAGGCTC+TGG 0.474079 1.2:+4138735 None:intergenic
CCAGGATTCCTAATCCCAAA+AGG 0.474118 1.2:-4138810 MS.gene044048:intron
CATTCAAAGGCAATGGAAAT+GGG 0.474896 1.2:+4137929 None:intergenic
TGTGTACCAGGAATTTGAGT+TGG 0.476181 1.2:+4140226 None:intergenic
CCAAGATTTGATGGTGGAAA+GGG 0.481164 1.2:+4140738 None:intergenic
AACACAAAACGTGCAGCTTC+AGG 0.483985 1.2:+4140937 None:intergenic
ATCAAATCTTGGGGTGATGA+TGG 0.495039 1.2:-4140727 MS.gene044048:CDS
ACTTTCATGCCATTTGGTAG+TGG 0.497443 1.2:-4138590 MS.gene044048:CDS
AGCTGTTTCTTGAATTGGAA+AGG 0.501218 1.2:-4140016 MS.gene044048:CDS
TTCCTCCTGGTTCAATGGGG+TGG 0.506411 1.2:-4141585 MS.gene044048:CDS
GCAATCTAGAGCCAAGGTTG+AGG 0.509932 1.2:-4140300 MS.gene044048:CDS
AGCTTAGCAAGCTCATTGCC+AGG 0.510940 1.2:+4138554 None:intergenic
TAAGCTTCCTCAAACGCAAA+TGG 0.513067 1.2:+4140821 None:intergenic
TAAACTTGACGACCAAATGA+TGG 0.513374 1.2:+4138513 None:intergenic
TTGAATTGGAAAGGAGAAGG+AGG 0.514480 1.2:-4140007 MS.gene044048:CDS
CAATCTAGAGCCAAGGTTGA+GGG 0.517826 1.2:-4140299 MS.gene044048:CDS
AAAATAAGGTAAGAAGAAAG+AGG 0.522546 1.2:+4141659 None:intergenic
ATTCTCTCCAACACCTGGCT+GGG 0.529923 1.2:+4137902 None:intergenic
CCCAAGATTTGATGGTGGAA+AGG 0.538660 1.2:+4140737 None:intergenic
TTCTTGAATTGGAAAGGAGA+AGG 0.539562 1.2:-4140010 MS.gene044048:CDS
TTTGATGGTGGAAAGGGCTA+AGG 0.541061 1.2:+4140744 None:intergenic
GCAAATGGTACTCACCTTGG+TGG 0.541284 1.2:+4140836 None:intergenic
GTCTTGGGAGTAGAGTTGAA+GGG 0.543626 1.2:+4141546 None:intergenic
GTGAAGGCAAGAGAGAAACT+TGG 0.544371 1.2:-4140109 MS.gene044048:intron
GGGAGTCCATTCAAAGGCAA+TGG 0.544618 1.2:+4137922 None:intergenic
TGCTTTGTAGGCTGAGCAGA+AGG 0.545509 1.2:-4139362 MS.gene044048:intron
TGAAGGAAATAATTAGTGAG+AGG 0.545555 1.2:-4140078 MS.gene044048:CDS
TTTGGTATATAGGTTGGAAG+TGG 0.546819 1.2:-4137980 MS.gene044048:intron
CCACAGCTACTGTCATGACA+TGG 0.547135 1.2:-4139919 MS.gene044048:CDS
GCAATTCACAAGGAAAATGA+TGG 0.548553 1.2:-4139340 MS.gene044048:CDS
GCATGTACTCCACTACCAAA+TGG 0.553843 1.2:+4138581 None:intergenic
GAAACTTCTCGAATGTGTAA+AGG 0.561471 1.2:-4139870 MS.gene044048:intron
ACAAGTGCAAAACTTCCTCC+TGG 0.564113 1.2:-4141598 MS.gene044048:CDS
TTCATACCTCAAATCTTGAA+GGG 0.564125 1.2:+4138715 None:intergenic
AACGCAAATGGTACTCACCT+TGG 0.565917 1.2:+4140833 None:intergenic
TAAGGCCACCCCATTGAACC+AGG 0.567074 1.2:+4141580 None:intergenic
AATTATTGGATTGTTGACAA+TGG 0.572734 1.2:-4140262 MS.gene044048:CDS
TCAATGGGGTGGCCTTACAT+AGG 0.572822 1.2:-4141574 MS.gene044048:CDS
CAGGATTCCTAATCCCAAAA+GGG 0.575886 1.2:-4138809 MS.gene044048:CDS
TATCCTACAAAATCCCATGC+AGG 0.583588 1.2:-4137711 MS.gene044048:CDS
GTATATAGGTTGGAAGTGGT+AGG 0.592193 1.2:-4137976 MS.gene044048:intron
CAAGTTGCGAAGTGAATCGA+GGG 0.600200 1.2:+4140783 None:intergenic
AGGATGTAAGTGTGTGATGT+TGG 0.605542 1.2:-4140965 MS.gene044048:CDS
TGTGTTGGAGAGCATGAGAA+TGG 0.607491 1.2:-4139086 MS.gene044048:CDS
CTTTCCACCATCAAATCTTG+GGG 0.609532 1.2:-4140736 MS.gene044048:CDS
TGATGAATATTTCTGAACAG+TGG 0.615557 1.2:+4138774 None:intergenic
AGTGGAGTACATGCTTGTCC+TGG 0.616452 1.2:-4138572 MS.gene044048:CDS
CCAAGTTGCGAAGTGAATCG+AGG 0.629437 1.2:+4140782 None:intergenic
CTGGCTGGGAGTCCATTCAA+AGG 0.643521 1.2:+4137916 None:intergenic
GATTCCTAATCCCAAAAGGG+TGG 0.645660 1.2:-4138806 MS.gene044048:CDS
CCATGTCATGACAGTAGCTG+TGG 0.646176 1.2:+4139919 None:intergenic
TGAGCAGAAGGCAATTCACA+AGG 0.649363 1.2:-4139350 MS.gene044048:CDS
GTTTGAGGAAGCTTATTCAG+AGG 0.650161 1.2:-4140813 MS.gene044048:CDS
CACAGCTACTGTCATGACAT+GGG 0.650868 1.2:-4139918 MS.gene044048:CDS
AAGTGGTAGGATCACACTGT+GGG 0.657629 1.2:-4137963 MS.gene044048:CDS
GTAGCTGATGTAGAGTACAA+AGG 0.662288 1.2:-4139031 MS.gene044048:intron
ATCACCCCAAGATTTGATGG+TGG 0.682987 1.2:+4140732 None:intergenic
AACTTCCTCCTGGTTCAATG+GGG 0.687690 1.2:-4141588 MS.gene044048:CDS
GAAGTGGTAGGATCACACTG+TGG 0.723901 1.2:-4137964 MS.gene044048:CDS
GGCCACCCCATTGAACCAGG+AGG 0.736013 1.2:+4141583 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAGAAAAAAGATTAATTTA+TGG + chr1.2:4141593-4141612 None:intergenic 10.0%
!! CATTTAATTAAAAAAATGTA+TGG + chr1.2:4141244-4141263 None:intergenic 10.0%
!!! AATTTGCTTATATTAAAAAA+CGG - chr1.2:4138126-4138145 MS.gene044048:intron 10.0%
!!! ATTTAACTTAGTTTAATTTT+TGG - chr1.2:4139568-4139587 MS.gene044048:intron 10.0%
!!! TAATATATTAATTTTAGGTA+CGG - chr1.2:4138378-4138397 MS.gene044048:intron 10.0%
!! AAAGAACATAAATGAAAATA+AGG + chr1.2:4137748-4137767 None:intergenic 15.0%
!! AATAAAATGTTAGAAACAAA+AGG - chr1.2:4140984-4141003 MS.gene044048:CDS 15.0%
!! AATGTAACTAAAAAACATTA+TGG - chr1.2:4138351-4138370 MS.gene044048:intron 15.0%
!! AATTAAAATGTGTCTTATAT+AGG + chr1.2:4138328-4138347 None:intergenic 15.0%
!! ATAATAATCAATTCAATCAT+TGG + chr1.2:4138894-4138913 None:intergenic 15.0%
!!! AACTATGTAATTTTTTTCAT+AGG - chr1.2:4141631-4141650 MS.gene044048:CDS 15.0%
!!! AATAAATGAATTTTTGCATT+TGG + chr1.2:4141207-4141226 None:intergenic 15.0%
!!! ATAAGTAAATTTTGACTTTT+AGG - chr1.2:4138028-4138047 MS.gene044048:intron 15.0%
!!! CATTTGGTTTATTATTTATA+AGG + chr1.2:4141191-4141210 None:intergenic 15.0%
!!! CTAAAAAATCTTTTATCATA+TGG + chr1.2:4139962-4139981 None:intergenic 15.0%
!! AAAAGATTAATTTATGGCTA+TGG + chr1.2:4141587-4141606 None:intergenic 20.0%
!! TAATAAACACAACAAGAATA+AGG + chr1.2:4140244-4140263 None:intergenic 20.0%
!! TACTTATATTAAAAAACGGA+GGG + chr1.2:4138015-4138034 None:intergenic 20.0%
!! TATGAATGAGTCAATTATAA+TGG - chr1.2:4140692-4140711 MS.gene044048:intron 20.0%
!! TATTCAATTAATGATGTATG+TGG - chr1.2:4138053-4138072 MS.gene044048:intron 20.0%
!! TCAATTATAATGGTAATACA+TGG - chr1.2:4140702-4140721 MS.gene044048:CDS 20.0%
!! TTAAATGCACAAATTCATTT+AGG - chr1.2:4141257-4141276 MS.gene044048:intron 20.0%
!! TTACTTATATTAAAAAACGG+AGG + chr1.2:4138016-4138035 None:intergenic 20.0%
!! TTTAAGGAAATGAAAAAAGT+AGG - chr1.2:4138702-4138721 MS.gene044048:intron 20.0%
!!! AAAATGGGAAATTTTTTCTA+GGG - chr1.2:4140417-4140436 MS.gene044048:intron 20.0%
!!! AATATCTAAAGTAGTCTTTA+TGG - chr1.2:4138237-4138256 MS.gene044048:intron 20.0%
!!! AATCTAAGAATTGAATTTTG+TGG - chr1.2:4140269-4140288 MS.gene044048:CDS 20.0%
!!! ATAAGCAAATTTTGACTTTT+AGG + chr1.2:4138117-4138136 None:intergenic 20.0%
!!! ATATTATCTGATGATGAAAT+TGG - chr1.2:4139410-4139429 MS.gene044048:intron 20.0%
!!! ATGCATAATTAACACTTTTA+AGG - chr1.2:4138686-4138705 MS.gene044048:intron 20.0%
!!! ATGTAATTTTTTTCATAGGT+GGG - chr1.2:4141635-4141654 MS.gene044048:CDS 20.0%
!!! ATTTTGTTATTTGTTGATAC+AGG - chr1.2:4140760-4140779 MS.gene044048:CDS 20.0%
!!! TAACTTAGTTTAATTTTTGG+TGG - chr1.2:4139571-4139590 MS.gene044048:intron 20.0%
!!! TATGTAATTTTTTTCATAGG+TGG - chr1.2:4141634-4141653 MS.gene044048:CDS 20.0%
!!! TTTACTAAATTGTTGTTATG+TGG - chr1.2:4138967-4138986 MS.gene044048:intron 20.0%
!!! TTTTACTATACTTTTTGTGA+AGG - chr1.2:4139265-4139284 MS.gene044048:intron 20.0%
! AAAATAAGGTAAGAAGAAAG+AGG + chr1.2:4137734-4137753 None:intergenic 25.0%
! AAGAGCTAAAGAAGAATTAT+TGG - chr1.2:4139114-4139133 MS.gene044048:intron 25.0%
! AATTATTGGATTGTTGACAA+TGG - chr1.2:4139128-4139147 MS.gene044048:intron 25.0%
! AGAGATATTTGATCAGTTAT+TGG + chr1.2:4141339-4141358 None:intergenic 25.0%
! AGGGTCAATAATTAATTAAG+TGG - chr1.2:4139012-4139031 MS.gene044048:intron 25.0%
! ATAATGGTAATACATGGTTA+AGG - chr1.2:4140708-4140727 MS.gene044048:CDS 25.0%
! ATGCTAGAAAAAGATTCATT+GGG - chr1.2:4141519-4141538 MS.gene044048:CDS 25.0%
! ATTAACTGCTTATACCTTAT+AGG + chr1.2:4140120-4140139 None:intergenic 25.0%
! CATTCAATTAACTATGTATG+TGG + chr1.2:4138092-4138111 None:intergenic 25.0%
! GAAATTGGAGATAACATTAT+TGG - chr1.2:4139425-4139444 MS.gene044048:intron 25.0%
! GTATAAATTTAATGACTCTG+CGG + chr1.2:4137991-4138010 None:intergenic 25.0%
! TAAAAATGATGAGAGAAACA+TGG + chr1.2:4137936-4137955 None:intergenic 25.0%
! TGCTTATATTAAAAAACGGA+GGG - chr1.2:4138130-4138149 MS.gene044048:intron 25.0%
! TTGCTTATATTAAAAAACGG+AGG - chr1.2:4138129-4138148 MS.gene044048:intron 25.0%
!! AATTTAAAATCACGCGATAT+AGG + chr1.2:4138770-4138789 None:intergenic 25.0%
!! ATTTTATAACAAGTGCTCTT+AGG + chr1.2:4141078-4141097 None:intergenic 25.0%
!! CAATTTAAAACCACAATGAT+TGG - chr1.2:4138867-4138886 MS.gene044048:intron 25.0%
!! TATGTGAAAGATTTTGCTTT+TGG - chr1.2:4141392-4141411 MS.gene044048:intron 25.0%
!! TGAATTTTGTGGAATTTTTC+AGG - chr1.2:4140280-4140299 MS.gene044048:CDS 25.0%
!! TGAGAACTTTTACTTATGTA+TGG - chr1.2:4139878-4139897 MS.gene044048:CDS 25.0%
!! TTCTGGCATTAATTTTTGTA+TGG - chr1.2:4138943-4138962 MS.gene044048:intron 25.0%
!!! AGATTTTGCTTTTGGTATAT+AGG - chr1.2:4141400-4141419 MS.gene044048:intron 25.0%
!!! ATTTGCAAAAGCATTCAAAA+TGG - chr1.2:4140401-4140420 MS.gene044048:intron 25.0%
!!! CAAAATGGGAAATTTTTTCT+AGG - chr1.2:4140416-4140435 MS.gene044048:intron 25.0%
!!! CAAATGATGGATCATAATAA+GGG + chr1.2:4140867-4140886 None:intergenic 25.0%
!!! TCAAACTTTGTTATTAGTCT+CGG - chr1.2:4140173-4140192 MS.gene044048:intron 25.0%
!!! TGTTTCTCTCATCATTTTTA+TGG - chr1.2:4137936-4137955 MS.gene044048:CDS 25.0%
!!! TTTGCAAAAGCATTCAAAAT+GGG - chr1.2:4140402-4140421 MS.gene044048:intron 25.0%
!!! TTTTTTTAAGTACCAATCCA+TGG - chr1.2:4139932-4139951 MS.gene044048:CDS 25.0%
AAAAGCAAAGAACGTTTGAT+TGG - chr1.2:4138513-4138532 MS.gene044048:CDS 30.0%
AAACATGCCAATTACCTATA+AGG - chr1.2:4140103-4140122 MS.gene044048:CDS 30.0%
AAACTGCAAAAGATCAAAGA+TGG + chr1.2:4139039-4139058 None:intergenic 30.0%
AACAAAAGGAGATCAATGAA+TGG - chr1.2:4140998-4141017 MS.gene044048:CDS 30.0%
ACATGAGAATATTATGAACC+AGG - chr1.2:4140562-4140581 MS.gene044048:intron 30.0%
ACTTGAATCACATTTGAGTA+AGG + chr1.2:4138838-4138857 None:intergenic 30.0%
ATATTCAAGACGAACATTCT+AGG - chr1.2:4138405-4138424 MS.gene044048:intron 30.0%
ATTCATACCTCAAATCTTGA+AGG + chr1.2:4140679-4140698 None:intergenic 30.0%
ATTTGATTCTCTGCATGAAT+TGG + chr1.2:4138215-4138234 None:intergenic 30.0%
CATGCTAGAAAAAGATTCAT+TGG - chr1.2:4141518-4141537 MS.gene044048:CDS 30.0%
CCTTATTATGATCCATCATT+TGG - chr1.2:4140865-4140884 MS.gene044048:CDS 30.0%
GATAAAAAGAGATCAACGAA+TGG - chr1.2:4140941-4140960 MS.gene044048:CDS 30.0%
GCAGAATTATTAGATGAGTA+TGG + chr1.2:4138182-4138201 None:intergenic 30.0%
GCTTATACCTTATAGGTAAT+TGG + chr1.2:4140113-4140132 None:intergenic 30.0%
TAATTTATGGCTATGGAAAG+TGG + chr1.2:4141580-4141599 None:intergenic 30.0%
TCAAGTGACACTATAATTTG+TGG - chr1.2:4139998-4140017 MS.gene044048:CDS 30.0%
TCTTCTTCTCCAAACAAAAA+AGG - chr1.2:4137877-4137896 MS.gene044048:intron 30.0%
TGAAGGAAATAATTAGTGAG+AGG - chr1.2:4139312-4139331 MS.gene044048:CDS 30.0%
TGCTAGAAAAAGATTCATTG+GGG - chr1.2:4141520-4141539 MS.gene044048:CDS 30.0%
TGGAGAAGAAGAAAAGATTT+GGG + chr1.2:4137869-4137888 None:intergenic 30.0%
TTCATACCTCAAATCTTGAA+GGG + chr1.2:4140678-4140697 None:intergenic 30.0%
TTGGAGAAGAAGAAAAGATT+TGG + chr1.2:4137870-4137889 None:intergenic 30.0%
TTTACACATTCGAGAAGTTT+CGG + chr1.2:4139521-4139540 None:intergenic 30.0%
! AAAATGAACGTTTTTCACAC+TGG + chr1.2:4140505-4140524 None:intergenic 30.0%
! AAATGAACGTTTTTCACACT+GGG + chr1.2:4140504-4140523 None:intergenic 30.0%
! ATATTGAAGTGTCACATTTC+TGG - chr1.2:4138926-4138945 MS.gene044048:intron 30.0%
! GTTGGTATTCTCAAAGTTTT+TGG - chr1.2:4139068-4139087 MS.gene044048:CDS 30.0%
! TATCGCGTGATTTTAAATTG+CGG - chr1.2:4138771-4138790 MS.gene044048:CDS 30.0%
! TGATGAATATTTCTGAACAG+TGG + chr1.2:4140619-4140638 None:intergenic 30.0%
! TTTCTTTTTCTTCCTTAGAG+TGG - chr1.2:4141154-4141173 MS.gene044048:intron 30.0%
! TTTGAGTGAACTTTAACTTC+TGG + chr1.2:4139637-4139656 None:intergenic 30.0%
!! ACAATACAAAAAAGCACTCT+TGG - chr1.2:4139184-4139203 MS.gene044048:intron 30.0%
!! ATCAAACGTTCTTTGCTTTT+AGG + chr1.2:4138513-4138532 None:intergenic 30.0%
!! CCAAATGATGGATCATAATA+AGG + chr1.2:4140868-4140887 None:intergenic 30.0%
!! TTTGCTTTTGGTATATAGGT+TGG - chr1.2:4141404-4141423 MS.gene044048:intron 30.0%
!!! GAAACTTGGAAGTATTTTGA+AGG - chr1.2:4139295-4139314 MS.gene044048:CDS 30.0%
!!! TCTTTGCTTTTAGGATATGT+TGG + chr1.2:4138504-4138523 None:intergenic 30.0%
!!! TTCGTTTTTTACTGTTGAGT+CGG - chr1.2:4139708-4139727 MS.gene044048:intron 30.0%
!!! TTGCAGTTTTCTTTTGAAGT+TGG - chr1.2:4139050-4139069 MS.gene044048:CDS 30.0%
!!! TTTTGAGCTGTTTCTTGAAT+TGG - chr1.2:4139369-4139388 MS.gene044048:intron 30.0%
AAATGATGAGAGAAACATGG+AGG + chr1.2:4137933-4137952 None:intergenic 35.0%
AATCATTGGTCCAATCATTG+TGG + chr1.2:4138880-4138899 None:intergenic 35.0%
AGAAGAAAAGATTTGGGTCT+TGG + chr1.2:4137863-4137882 None:intergenic 35.0%
ATAGCTGTGACATTACATAG+TGG + chr1.2:4140452-4140471 None:intergenic 35.0%
ATCATTTGGTCGTCAAGTTT+AGG - chr1.2:4140879-4140898 MS.gene044048:CDS 35.0%
ATGGTAAACTACAGCTGAAT+TGG - chr1.2:4140069-4140088 MS.gene044048:CDS 35.0%
ATTCAACCCTTCAAGATTTG+AGG - chr1.2:4140669-4140688 MS.gene044048:intron 35.0%
CATTCAAAGGCAATGGAAAT+GGG + chr1.2:4141464-4141483 None:intergenic 35.0%
CCAAATACTTTCATGCCATT+TGG - chr1.2:4140794-4140813 MS.gene044048:CDS 35.0%
CTAAAGTAGTCTTTATGGTG+TGG - chr1.2:4138242-4138261 MS.gene044048:intron 35.0%
CTCAACAGTAAAAAACGAAG+AGG + chr1.2:4139707-4139726 None:intergenic 35.0%
CTTGAAGGGTTGAATTTATG+AGG + chr1.2:4140664-4140683 None:intergenic 35.0%
GAAACTTCTCGAATGTGTAA+AGG - chr1.2:4139520-4139539 MS.gene044048:intron 35.0%
GAAGAAAAGATTTGGGTCTT+GGG + chr1.2:4137862-4137881 None:intergenic 35.0%
GCAATTCACAAGGAAAATGA+TGG - chr1.2:4140050-4140069 MS.gene044048:CDS 35.0%
GGAAATAATTAGTGAGAGGA+AGG - chr1.2:4139316-4139335 MS.gene044048:CDS 35.0%
GTATATAGTTGTCCACTCTA+AGG + chr1.2:4141169-4141188 None:intergenic 35.0%
GTGATGTGTGGAACAATAAA+GGG - chr1.2:4138993-4139012 MS.gene044048:intron 35.0%
TAAACTTGACGACCAAATGA+TGG + chr1.2:4140880-4140899 None:intergenic 35.0%
TAAATTTAATGACTCTGCGG+TGG + chr1.2:4137988-4138007 None:intergenic 35.0%
TCATTTCCAACTCAAATTCC+TGG - chr1.2:4139158-4139177 MS.gene044048:intron 35.0%
TGTGATGTGTGGAACAATAA+AGG - chr1.2:4138992-4139011 MS.gene044048:intron 35.0%
TGTTGAGTCGGTAATCTAAT+TGG - chr1.2:4139720-4139739 MS.gene044048:intron 35.0%
TTCTTGAATTGGAAAGGAGA+AGG - chr1.2:4139380-4139399 MS.gene044048:intron 35.0%
! ATGGGATTTTGTAGGATAGA+GGG + chr1.2:4141677-4141696 None:intergenic 35.0%
! CGAATATGTGTTGAGTTTTG+AGG - chr1.2:4139773-4139792 MS.gene044048:intron 35.0%
! TTTGGTATATAGGTTGGAAG+TGG - chr1.2:4141410-4141429 MS.gene044048:intron 35.0%
! TTTTATCATATGGTCCACCA+TGG + chr1.2:4139952-4139971 None:intergenic 35.0%
!! AGCTGTTTCTTGAATTGGAA+AGG - chr1.2:4139374-4139393 MS.gene044048:intron 35.0%
!! CCAAATGGCATGAAAGTATT+TGG + chr1.2:4140797-4140816 None:intergenic 35.0%
!! TGAATCTTTTTCTAGCATGC+TGG + chr1.2:4141517-4141536 None:intergenic 35.0%
!! TGCATGAATTGGATTAGTCA+CGG + chr1.2:4138204-4138223 None:intergenic 35.0%
!! TGTTTTGTTCTAGGTCGTTT+TGG + chr1.2:4137771-4137790 None:intergenic 35.0%
!! TTTTAAGTACCAATCCATGG+TGG - chr1.2:4139935-4139954 MS.gene044048:CDS 35.0%
!!! ATTTTTGGTGGTTTCTACAG+TGG - chr1.2:4139583-4139602 MS.gene044048:intron 35.0%
!!! GCACTTGTTTGTTTTGTTCT+AGG + chr1.2:4137780-4137799 None:intergenic 35.0%
!!! GCATAGCAACCTTTTTTGTT+TGG + chr1.2:4137889-4137908 None:intergenic 35.0%
!!! GCTTTTTTGTATTGTGTACC+AGG + chr1.2:4139179-4139198 None:intergenic 35.0%
!!! GGCATGAAAGTATTTGGTTT+TGG + chr1.2:4140791-4140810 None:intergenic 35.0%
!!! TGGAATTTTTCAGGTTGTGT+TGG - chr1.2:4140289-4140308 MS.gene044048:CDS 35.0%
AAAACTTCCTCCTGGTTCAA+TGG - chr1.2:4137800-4137819 MS.gene044048:intron 40.0%
AAACTTCCTCCTGGTTCAAT+GGG - chr1.2:4137801-4137820 MS.gene044048:intron 40.0%
AGGATGTAAGTGTGTGATGT+TGG - chr1.2:4138425-4138444 MS.gene044048:intron 40.0%
ATCAAATCTTGGGGTGATGA+TGG - chr1.2:4138663-4138682 MS.gene044048:intron 40.0%
ATCATCACCCCAAGATTTGA+TGG + chr1.2:4138664-4138683 None:intergenic 40.0%
CAGGATTCCTAATCCCAAAA+GGG - chr1.2:4140581-4140600 MS.gene044048:intron 40.0%
CCATTCAAAGGCAATGGAAA+TGG + chr1.2:4141465-4141484 None:intergenic 40.0%
CCATTTCCATTGCCTTTGAA+TGG - chr1.2:4141462-4141481 MS.gene044048:intron 40.0%
CCTTTCCACCATCAAATCTT+GGG - chr1.2:4138653-4138672 MS.gene044048:intron 40.0%
CTCAATTCTCTTCGTCTTCA+TGG + chr1.2:4139862-4139881 None:intergenic 40.0%
CTTTCCACCATCAAATCTTG+GGG - chr1.2:4138654-4138673 MS.gene044048:intron 40.0%
GGTCGATTGTAGATGATATG+AGG - chr1.2:4138263-4138282 MS.gene044048:intron 40.0%
GTAGCTGATGTAGAGTACAA+AGG - chr1.2:4140359-4140378 MS.gene044048:intron 40.0%
GTTATGTGGAATGTGATGTG+TGG - chr1.2:4138981-4139000 MS.gene044048:intron 40.0%
GTTTGAGGAAGCTTATTCAG+AGG - chr1.2:4138577-4138596 MS.gene044048:CDS 40.0%
TAAGCTTCCTCAAACGCAAA+TGG + chr1.2:4138572-4138591 None:intergenic 40.0%
TATCCTACAAAATCCCATGC+AGG - chr1.2:4141679-4141698 MS.gene044048:CDS 40.0%
TCACACTGTGGGATTCAATA+TGG - chr1.2:4141438-4141457 MS.gene044048:intron 40.0%
TCAGCTACTGCTTCTCTAAA+TGG + chr1.2:4140347-4140366 None:intergenic 40.0%
TGAAGGGTTTGTCCTATGTA+AGG + chr1.2:4137831-4137850 None:intergenic 40.0%
TGGTGGAAAAACAAAGCACA+AGG + chr1.2:4138540-4138559 None:intergenic 40.0%
TGTGTACCAGGAATTTGAGT+TGG + chr1.2:4139167-4139186 None:intergenic 40.0%
TTGAATTGGAAAGGAGAAGG+AGG - chr1.2:4139383-4139402 MS.gene044048:intron 40.0%
! ACTTTCATGCCATTTGGTAG+TGG - chr1.2:4140800-4140819 MS.gene044048:CDS 40.0%
! CATGGGATTTTGTAGGATAG+AGG + chr1.2:4141678-4141697 None:intergenic 40.0%
! GTATATAGGTTGGAAGTGGT+AGG - chr1.2:4141414-4141433 MS.gene044048:intron 40.0%
! TGGGATTTTGTAGGATAGAG+GGG + chr1.2:4141676-4141695 None:intergenic 40.0%
! TGTGGTAATGCTTGCTTTGT+AGG - chr1.2:4140016-4140035 MS.gene044048:CDS 40.0%
!! CCAAGATTTGATGGTGGAAA+GGG + chr1.2:4138655-4138674 None:intergenic 40.0%
!! CTACAGTGGATTGCTTTGAT+AGG - chr1.2:4139597-4139616 MS.gene044048:intron 40.0%
!! TGAGGCTCTGGAAAAAATTC+AGG + chr1.2:4140646-4140665 None:intergenic 40.0%
!! TTTTTGGCAATCTAGAGCCA+AGG - chr1.2:4139084-4139103 MS.gene044048:CDS 40.0%
!!! TGTGCTTTGTTTTTCCACCA+AGG - chr1.2:4138540-4138559 MS.gene044048:CDS 40.0%
AACACAAAACGTGCAGCTTC+AGG + chr1.2:4138456-4138475 None:intergenic 45.0%
AACGCAAATGGTACTCACCT+TGG + chr1.2:4138560-4138579 None:intergenic 45.0%
AACTTCCTCCTGGTTCAATG+GGG - chr1.2:4137802-4137821 MS.gene044048:intron 45.0%
AAGTGGTAGGATCACACTGT+GGG - chr1.2:4141427-4141446 MS.gene044048:intron 45.0%
AATTGCGGCTGTAGTCACAT+TGG - chr1.2:4138786-4138805 MS.gene044048:CDS 45.0%
ACAAGTGCAAAACTTCCTCC+TGG - chr1.2:4137792-4137811 MS.gene044048:intron 45.0%
AGGGCTAAGGCTTCAATTTC+AGG + chr1.2:4138636-4138655 None:intergenic 45.0%
ATCACCCCAAGATTTGATGG+TGG + chr1.2:4138661-4138680 None:intergenic 45.0%
CAAGTTGCGAAGTGAATCGA+GGG + chr1.2:4138610-4138629 None:intergenic 45.0%
CACAGCTACTGTCATGACAT+GGG - chr1.2:4139472-4139491 MS.gene044048:intron 45.0%
CCAGGATTCCTAATCCCAAA+AGG - chr1.2:4140580-4140599 MS.gene044048:intron 45.0%
CCCTTTCCACCATCAAATCT+TGG - chr1.2:4138652-4138671 MS.gene044048:intron 45.0%
GATTCCTAATCCCAAAAGGG+TGG - chr1.2:4140584-4140603 MS.gene044048:intron 45.0%
GCATGTACTCCACTACCAAA+TGG + chr1.2:4140812-4140831 None:intergenic 45.0%
GGGTTGAATTTATGAGGCTC+TGG + chr1.2:4140658-4140677 None:intergenic 45.0%
GTCTTGGGAGTAGAGTTGAA+GGG + chr1.2:4137847-4137866 None:intergenic 45.0%
GTGAAGGCAAGAGAGAAACT+TGG - chr1.2:4139281-4139300 MS.gene044048:intron 45.0%
GTGAGTACCATTTGCGTTTG+AGG - chr1.2:4138562-4138581 MS.gene044048:CDS 45.0%
TCATATGGTCCACCATGGAT+TGG + chr1.2:4139947-4139966 None:intergenic 45.0%
TGAGCAGAAGGCAATTCACA+AGG - chr1.2:4140040-4140059 MS.gene044048:CDS 45.0%
TGATGAGAGAAACATGGAGG+CGG + chr1.2:4137930-4137949 None:intergenic 45.0%
TTAGTCTCGGCATTTATGCG+CGG - chr1.2:4140186-4140205 MS.gene044048:intron 45.0%
! CAATCTAGAGCCAAGGTTGA+GGG - chr1.2:4139091-4139110 MS.gene044048:CDS 45.0%
! GCATTGCTTTCCACCCTTTT+GGG + chr1.2:4140597-4140616 None:intergenic 45.0%
! GGGATTTTGTAGGATAGAGG+GGG + chr1.2:4141675-4141694 None:intergenic 45.0%
! TGAAGCTGCACGTTTTGTGT+TGG - chr1.2:4138455-4138474 MS.gene044048:intron 45.0%
! TGTGTTGGAGAGCATGAGAA+TGG - chr1.2:4140304-4140323 MS.gene044048:CDS 45.0%
!! CAGTGGATTGCTTTGATAGG+TGG - chr1.2:4139600-4139619 MS.gene044048:intron 45.0%
!! CCCAAGATTTGATGGTGGAA+AGG + chr1.2:4138656-4138675 None:intergenic 45.0%
!! TTTAGCTCTTCCCTCAACCT+TGG + chr1.2:4139104-4139123 None:intergenic 45.0%
!! TTTGATGGTGGAAAGGGCTA+AGG + chr1.2:4138649-4138668 None:intergenic 45.0%
!!! CCTTTTGGGATTAGGAATCC+TGG + chr1.2:4140583-4140602 None:intergenic 45.0%
!!! CTTTCCACCCTTTTGGGATT+AGG + chr1.2:4140591-4140610 None:intergenic 45.0%
!! AATTTACTTATATTAAAAAA+CGG + chr1.2:4138019-4138038 None:intergenic 5.0%
!!! GTTATTAATATATTAATTTT+AGG - chr1.2:4138373-4138392 MS.gene044048:intron 5.0%
AGCTTAGCAAGCTCATTGCC+AGG + chr1.2:4140839-4140858 None:intergenic 50.0%
AGTGGAGTACATGCTTGTCC+TGG - chr1.2:4140818-4140837 MS.gene044048:CDS 50.0%
ATTCTCTCCAACACCTGGCT+GGG + chr1.2:4141491-4141510 None:intergenic 50.0%
CCAAGTTGCGAAGTGAATCG+AGG + chr1.2:4138611-4138630 None:intergenic 50.0%
CCACAGCTACTGTCATGACA+TGG - chr1.2:4139471-4139490 MS.gene044048:intron 50.0%
CCATGTCATGACAGTAGCTG+TGG + chr1.2:4139474-4139493 None:intergenic 50.0%
CCTCGATTCACTTCGCAACT+TGG - chr1.2:4138608-4138627 MS.gene044048:CDS 50.0%
GAAGTGGTAGGATCACACTG+TGG - chr1.2:4141426-4141445 MS.gene044048:intron 50.0%
GCAAATGGTACTCACCTTGG+TGG + chr1.2:4138557-4138576 None:intergenic 50.0%
GGGAGTCCATTCAAAGGCAA+TGG + chr1.2:4141471-4141490 None:intergenic 50.0%
GGTAGATTCTCTCCAACACC+TGG + chr1.2:4141496-4141515 None:intergenic 50.0%
GGTCTTGGGAGTAGAGTTGA+AGG + chr1.2:4137848-4137867 None:intergenic 50.0%
TGCTTTGTAGGCTGAGCAGA+AGG - chr1.2:4140028-4140047 MS.gene044048:CDS 50.0%
! ACGCCTGCATGGGATTTTGT+AGG + chr1.2:4141685-4141704 None:intergenic 50.0%
! GCAATCTAGAGCCAAGGTTG+AGG - chr1.2:4139090-4139109 MS.gene044048:CDS 50.0%
! GGCATTGCTTTCCACCCTTT+TGG + chr1.2:4140598-4140617 None:intergenic 50.0%
! TCAATGGGGTGGCCTTACAT+AGG - chr1.2:4137816-4137835 MS.gene044048:intron 50.0%
!! TGGAGTGCTTTTTGCTGCTC+AGG - chr1.2:4139445-4139464 MS.gene044048:intron 50.0%
!! TGGCAATGAGCTTGCTAAGC+TGG - chr1.2:4140838-4140857 MS.gene044048:CDS 50.0%
AGAGAAACATGGAGGCGGAG+TGG + chr1.2:4137925-4137944 None:intergenic 55.0%
CTGGCTGGGAGTCCATTCAA+AGG + chr1.2:4141477-4141496 None:intergenic 55.0%
GAGGCGGAGTGGAACTAGAT+AGG + chr1.2:4137914-4137933 None:intergenic 55.0%
GATTCTCTCCAACACCTGGC+TGG + chr1.2:4141492-4141511 None:intergenic 55.0%
TAAGGCCACCCCATTGAACC+AGG + chr1.2:4137813-4137832 None:intergenic 55.0%
TTCCTCCTGGTTCAATGGGG+TGG - chr1.2:4137805-4137824 MS.gene044048:intron 55.0%
! CTTTGAATGGACTCCCAGCC+AGG - chr1.2:4141475-4141494 MS.gene044048:intron 55.0%
ATGGACTCCCAGCCAGGTGT+TGG - chr1.2:4141481-4141500 MS.gene044048:intron 60.0%
GTCTCGGCATTTATGCGCGG+AGG - chr1.2:4140189-4140208 MS.gene044048:intron 60.0%
GGCCACCCCATTGAACCAGG+AGG + chr1.2:4137810-4137829 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr1.2 gene 4137702 4141710 4137702 ID=MS.gene044048
chr1.2 mRNA 4137702 4141710 4137702 ID=MS.gene044048.t1;Parent=MS.gene044048
chr1.2 exon 4141514 4141710 4141514 ID=MS.gene044048.t1.exon1;Parent=MS.gene044048.t1
chr1.2 CDS 4141514 4141710 4141514 ID=cds.MS.gene044048.t1;Parent=MS.gene044048.t1
chr1.2 exon 4140693 4141017 4140693 ID=MS.gene044048.t1.exon2;Parent=MS.gene044048.t1
chr1.2 CDS 4140693 4141017 4140693 ID=cds.MS.gene044048.t1;Parent=MS.gene044048.t1
chr1.2 exon 4140207 4140356 4140207 ID=MS.gene044048.t1.exon3;Parent=MS.gene044048.t1
chr1.2 CDS 4140207 4140356 4140207 ID=cds.MS.gene044048.t1;Parent=MS.gene044048.t1
chr1.2 exon 4139871 4140125 4139871 ID=MS.gene044048.t1.exon4;Parent=MS.gene044048.t1
chr1.2 CDS 4139871 4140125 4139871 ID=cds.MS.gene044048.t1;Parent=MS.gene044048.t1
chr1.2 exon 4139288 4139374 4139288 ID=MS.gene044048.t1.exon5;Parent=MS.gene044048.t1
chr1.2 CDS 4139288 4139374 4139288 ID=cds.MS.gene044048.t1;Parent=MS.gene044048.t1
chr1.2 exon 4139032 4139110 4139032 ID=MS.gene044048.t1.exon6;Parent=MS.gene044048.t1
chr1.2 CDS 4139032 4139110 4139032 ID=cds.MS.gene044048.t1;Parent=MS.gene044048.t1
chr1.2 exon 4138722 4138828 4138722 ID=MS.gene044048.t1.exon7;Parent=MS.gene044048.t1
chr1.2 CDS 4138722 4138828 4138722 ID=cds.MS.gene044048.t1;Parent=MS.gene044048.t1
chr1.2 exon 4138512 4138630 4138512 ID=MS.gene044048.t1.exon8;Parent=MS.gene044048.t1
chr1.2 CDS 4138512 4138630 4138512 ID=cds.MS.gene044048.t1;Parent=MS.gene044048.t1
chr1.2 exon 4137916 4137990 4137916 ID=MS.gene044048.t1.exon9;Parent=MS.gene044048.t1
chr1.2 CDS 4137916 4137990 4137916 ID=cds.MS.gene044048.t1;Parent=MS.gene044048.t1
chr1.2 exon 4137702 4137759 4137702 ID=MS.gene044048.t1.exon10;Parent=MS.gene044048.t1
chr1.2 CDS 4137702 4137759 4137702 ID=cds.MS.gene044048.t1;Parent=MS.gene044048.t1
Gene Sequence

>MS.gene044048

ATGGATTCAACTTTGGCTTACATCATTGTCCTCTTTCTTCTTACCTTATTTTCATTTATGTTCTTTCCAAAACGACCTAGAACAAAACAAACAAGTGCAAAACTTCCTCCTGGTTCAATGGGGTGGCCTTACATAGGACAAACCCTTCAACTCTACTCCCAAGACCCAAATCTTTTCTTCTTCTCCAAACAAAAAAGGTTGCTATGCTACCTATCTAGTTCCACTCCGCCTCCATGTTTCTCTCATCATTTTTATGGATTCAGATTCTCTGCATCTGATGTAGCCACCGCAGAGTCATTAAATTTATACTCCCTCCGTTTTTTAATATAAGTAAATTTTGACTTTTAGGTTTATTCAATTAATGATGTATGTGGTTTATATTATAAACCACATACATAGTTAATTGAATGAACCTAAAAGTCAAAATTTGCTTATATTAAAAAACGGAGGGAGTAAGAGATAAAATATTTAAATTCTCCATACTCATCTAATAATTCTGCCGTGACTAATCCAATTCATGCAGAGAATCAAATTGAATATCTAAAGTAGTCTTTATGGTGTGGTCGATTGTAGATGATATGAGGACTAAACACTATTGTTTTAATCTCATTAAACTTTTAATACCTATATAAGACACATTTTAATTGTGAATGTAACTAAAAAACATTATGGTTATTAATATATTAATTTTAGGTACGGAGAAATATTCAAGACGAACATTCTAGGATGTAAGTGTGTGATGTTGGCAAGTCCTGAAGCTGCACGTTTTGTGTTGGTGACACAATCTCACTTATTTAAACCAACATATCCTAAAAGCAAAGAACGTTTGATTGGTCCTTGTGCTTTGTTTTTCCACCAAGGTGAGTACCATTTGCGTTTGAGGAAGCTTATTCAGAGGTCTCTCTCCCTCGATTCACTTCGCAACTTGGTTCCTGAAATTGAAGCCTTAGCCCTTTCCACCATCAAATCTTGGGGTGATGATGGATGCATAATTAACACTTTTAAGGAAATGAAAAAAGTAGGTTATATTATATCTTATAATTTATTTTTAGCTAGTTTTTTTTTCCTATATCGCGTGATTTTAAATTGCGGCTGTAGTCACATTGGTGTTGCAATATTTGATATTGCAAAAACCTTACTCAAATGTGATTCAAGTTGCAGACGACAATTTAAAACCACAATGATTGGACCAATGATTGAATTGATTATTATATAGTACTATTTATATTGAAGTGTCACATTTCTGGCATTAATTTTTGTATGGTTTTACTAAATTGTTGTTATGTGGAATGTGATGTGTGGAACAATAAAGGGTCAATAATTAATTAAGTGGTCCATCTTTGATCTTTTGCAGTTTTCTTTTGAAGTTGGTATTCTCAAAGTTTTTGGCAATCTAGAGCCAAGGTTGAGGGAAGAGCTAAAGAAGAATTATTGGATTGTTGACAATGGTTACAATTCATTTCCAACTCAAATTCCTGGTACACAATACAAAAAAGCACTCTTGGTAAGTACTATATTAATTCAAGAAATTTAATTTATGTTTTTAAATGTATTGTTTTTGAATTTTACTATACTTTTTGTGAAGGCAAGAGAGAAACTTGGAAGTATTTTGAAGGAAATAATTAGTGAGAGGAAGGAGAAGAAGTTGCTTGAAAGTGAAAGAGATCTTTTGAGCTGTTTCTTGAATTGGAAAGGAGAAGGAGGAGAAATATTATCTGATGATGAAATTGGAGATAACATTATTGGAGTGCTTTTTGCTGCTCAGGATACCACAGCTACTGTCATGACATGGGTGATCAAGTACTTGCATGATGAACCGAAACTTCTCGAATGTGTAAAGGTACGATCAAGAGATAAATTCAAGAAATTTAACTTAGTTTAATTTTTGGTGGTTTCTACAGTGGATTGCTTTGATAGGTGGTTCACTGTAGACCAGAAGTTAAAGTTCACTCAAAACTCTACTGAAGATCGAAGACGTCTCTTAAAAGTAGAAAGTCAGAATCCTCTTCGTTTTTTACTGTTGAGTCGGTAATCTAATTGGTGTCGTCTGTTTGACAAAAACATACAAAAACGAATATGTGTTGAGTTTTGAGGCACGTCTATTTGTTTTTTTTTCTTGTTTTTGTTAAACTGACATCAATGAAGTCACTGTCTCAACCATGAAGACGAAGAGAATTGAGAACTTTTACTTATGTATGGCAATGTTTGTCGTCATTGAAGTTTCGAGCGATTTTTTTAAGTACCAATCCATGGTGGACCATATGATAAAAGATTTTTTAGATTTGACATATCTATGTCAAGTGACACTATAATTTGTGGTAATGCTTGCTTTGTAGGCTGAGCAGAAGGCAATTCACAAGGAAAATGATGGTAAACTACAGCTGAATTGGAATCAGACTAGAAACATGCCAATTACCTATAAGGTATAAGCAGTTAATGCAATGTTTCAATCTCAATTTTTAAAATGAATCTCAAACTTTGTTATTAGTCTCGGCATTTATGCGCGGAGGATACTTTTATAAATGCAAGAAGTTTATATCCTTATTCTTGTTGTGTTTATTAGTAAGAATCTAAGAATTGAATTTTGTGGAATTTTTCAGGTTGTGTTGGAGAGCATGAGAATGGCAAGTGTTATATCATTTCCATTTAGAGAAGCAGTAGCTGATGTAGAGTACAAAGGTAAGAGCAATACTTTCTATATTTGCAAAAGCATTCAAAATGGGAAATTTTTTCTAGGGTCAAATTATCCACTATGTAATGTCACAGCTATGTCGATACTATTATACTATGCTGAAAATTCCCAGTGTGAAAAACGTTCATTTTAAATAATATACGAGCAAGCACATGAAAAATATGACTCACATGAGAATATTATGAACCAGGATTCCTAATCCCAAAAGGGTGGAAAGCAATGCCACTGTTCAGAAATATTCATCATAATCCTGAATTTTTTCCAGAGCCTCATAAATTCAACCCTTCAAGATTTGAGGTATGAATGAGTCAATTATAATGGTAATACATGGTTAAGGCTAATTACTTGTCAAATATATAAATAGTAATTTTGTTATTTGTTGATACAGGTTTCACCAAAACCAAATACTTTCATGCCATTTGGTAGTGGAGTACATGCTTGTCCTGGCAATGAGCTTGCTAAGCTGGAGACCCTTATTATGATCCATCATTTGGTCGTCAAGTTTAGGTATTGTTGATTAATATTCAAGTGAAAGTAAAATGATAAAGATAAAAAGAGATCAACGAATGGATTATAGTTAATCAAGAGAAAATAAAATGTTAGAAACAAAAGGAGATCAATGAATGGATTATACTTAATCAAGAGAAGAAGAAAAAAGTCAAATTAATTTATAATATTTGTCCTAAGAGCACTTGTTATAAAATTTAATATAGAATATTCGTCTTAAAAGTTCAATGCACAACTTTTTAAAATGTTCAATTTTCTTTTTCTTCCTTAGAGTGGACAACTATATACCTTATAAATAATAAACCAAATGCAAAAATTCATTTATTAATTTATAATTTTGCCATACATTTTTTTAATTAAATGCACAAATTCATTTAGGAAAAGAGAAACACAATTTTGACATACATTTTCAAATTAAAATGAAATGTCAAATTTCCAATAACTGATCAAATATCTCTTGCTAATGATACTAGTAAATTTGTGTTATGTGATATGTGAAAGATTTTGCTTTTGGTATATAGGTTGGAAGTGGTAGGATCACACTGTGGGATTCAATATGGCCCATTTCCATTGCCTTTGAATGGACTCCCAGCCAGGTGTTGGAGAGAATCTACCAGCATGCTAGAAAAAGATTCATTGGGGAAGAAATGAATGACATCATTGCTGAGAAAAAAATCCACTTTCCATAGCCATAAATTAATCTTTTTTCTTTATCTTTTCTATATTAATTAACTATGTAATTTTTTTCATAGGTGGGCACTTCAACTTTTGCCCCCTCTATCCTACAAAATCCCATGCAGGCGTCCTTAA
Protein sequence

>MS.gene044048.t1

MDSTLAYIIVLFLLTLFSFMFFPKRPRTKQTSAKLPPGSMGWPYIGQTLQLYSQDPNLFFFSKQKRYGEIFKTNILGCKCVMLASPEAARFVLVTQSHLFKPTYPKSKERLIGPCALFFHQGEYHLRLRKLIQRSLSLDSLRNLVPEIEALALSTIKSWGDDGCIINTFKEMKKFSFEVGILKVFGNLEPRLREELKKNYWIVDNGYNSFPTQIPGTQYKKALLAREKLGSILKEIISERKEKKLLESERDLLSCFLNWKGEGGEILSDDEIGDNIIGVLFAAQDTTATVMTWVIKYLHDEPKLLECVKAEQKAIHKENDGKLQLNWNQTRNMPITYKVVLESMRMASVISFPFREAVADVEYKGFLIPKGWKAMPLFRNIHHNPEFFPEPHKFNPSRFEVSPKPNTFMPFGSGVHACPGNELAKLETLIMIHHLVVKFRLEVVGSHCGIQYGPFPLPLNGLPARWALQLLPPLSYKIPCRRP