Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene046135.t1 | XP_003592793.1 | 99.5 | 634 | 3 | 0 | 1 | 634 | 102 | 735 | 0.00E+00 | 1290.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene046135.t1 | Q7SIC9 | 88.6 | 631 | 72 | 0 | 1 | 631 | 43 | 673 | 0.0e+00 | 1164.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene046135.t1 | G7IF28 | 99.5 | 634 | 3 | 0 | 1 | 634 | 102 | 735 | 0.0e+00 | 1290.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene046135 | MS.gene55762 | PPI |
| MS.gene06030 | MS.gene046135 | PPI |
| MS.gene048888 | MS.gene046135 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene046135.t1 | MTR_5g059410 | 99.527 | 634 | 3 | 0 | 1 | 634 | 102 | 735 | 0.0 | 1318 |
| MS.gene046135.t1 | MTR_1g116120 | 99.527 | 634 | 3 | 0 | 1 | 634 | 102 | 735 | 0.0 | 1318 |
| MS.gene046135.t1 | MTR_4g024630 | 88.784 | 633 | 71 | 0 | 1 | 633 | 102 | 734 | 0.0 | 1184 |
| MS.gene046135.t1 | MTR_4g024630 | 88.235 | 578 | 68 | 0 | 56 | 633 | 3 | 580 | 0.0 | 1065 |
| MS.gene046135.t1 | MTR_0776s0010 | 51.975 | 633 | 289 | 9 | 1 | 624 | 955 | 1581 | 0.0 | 598 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene046135.t1 | AT2G45290 | 86.730 | 633 | 84 | 0 | 1 | 633 | 108 | 740 | 0.0 | 1177 |
| MS.gene046135.t1 | AT2G45290 | 86.730 | 633 | 84 | 0 | 1 | 633 | 108 | 740 | 0.0 | 1177 |
| MS.gene046135.t1 | AT3G60750 | 88.114 | 631 | 75 | 0 | 1 | 631 | 108 | 738 | 0.0 | 1176 |
| MS.gene046135.t1 | AT3G60750 | 87.956 | 631 | 75 | 1 | 1 | 631 | 108 | 737 | 0.0 | 1169 |
Find 176 sgRNAs with CRISPR-Local
Find 250 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GACAGCCTTTGCTTCCTTAA+TGG | 0.175474 | 1.1:-81687101 | None:intergenic |
| AAGGTTCTTCCTGGTCTTAT+TGG | 0.215510 | 1.1:+81687990 | MS.gene046135:CDS |
| AATCGAACATTGCGCTCTTC+TGG | 0.242416 | 1.1:-81688083 | None:intergenic |
| TTAAACCAAGAAGGATTCTT+TGG | 0.258486 | 1.1:-81685791 | None:intergenic |
| AGACAAACCTACTTTGATTA+AGG | 0.266496 | 1.1:+81687126 | MS.gene046135:CDS |
| TATGCTCTTCTTCATCTTGC+TGG | 0.269634 | 1.1:+81685860 | MS.gene046135:CDS |
| GTAGCATCAGCAGGGGTTTC+CGG | 0.275225 | 1.1:-81687930 | None:intergenic |
| ACCATTGGCATTGATCGATT+TGG | 0.287349 | 1.1:+81688773 | MS.gene046135:CDS |
| CTTGCCGGACATTGGGGTCT+TGG | 0.291105 | 1.1:+81686923 | MS.gene046135:CDS |
| CACTTGGATGGCATGTGATT+TGG | 0.296401 | 1.1:+81687038 | MS.gene046135:CDS |
| GCAAAAGTTGCCTAACCTTC+CGG | 0.305640 | 1.1:+81688448 | MS.gene046135:CDS |
| CCTCAATTCTTGCCCTTTCT+CGG | 0.314282 | 1.1:+81688426 | MS.gene046135:CDS |
| ATAACCCAAAGAATCCTTCT+TGG | 0.318239 | 1.1:+81685786 | MS.gene046135:CDS |
| GCTCTTCTGGAGTAGCCTTT+TGG | 0.321780 | 1.1:-81688070 | None:intergenic |
| ATGACTTTGTTGAAATCGTT+TGG | 0.325235 | 1.1:+81688041 | MS.gene046135:CDS |
| GTGTTCACTTGCCGGACATT+GGG | 0.326670 | 1.1:+81686916 | MS.gene046135:CDS |
| ACAGATCTATGAAACTTCTT+TGG | 0.327073 | 1.1:-81688864 | None:intergenic |
| CTGCCGCCGCTGATGATCTA+AGG | 0.331163 | 1.1:+81688582 | MS.gene046135:CDS |
| AATGAAGCGTGTTCACTTGC+CGG | 0.335597 | 1.1:+81686908 | MS.gene046135:CDS |
| TGAAATTCGTGCAGCCATTA+AGG | 0.339511 | 1.1:+81687087 | MS.gene046135:CDS |
| TTGTTTAGGTCCTCTGGGTC+AGG | 0.341996 | 1.1:+81686628 | MS.gene046135:intron |
| GCTTCGAGTGCAGCACCCTC+AGG | 0.351157 | 1.1:-81687605 | None:intergenic |
| CTGTAGGAATTAGCTTTGTT+TGG | 0.355528 | 1.1:-81687382 | None:intergenic |
| GTTACCACTACCATTGGATT+TGG | 0.357397 | 1.1:+81687355 | MS.gene046135:CDS |
| GCCCTGGCCAAGGTTCTTCC+TGG | 0.357791 | 1.1:+81687981 | MS.gene046135:CDS |
| CAAGAATTGAGGGTCTCTTC+TGG | 0.372757 | 1.1:-81688415 | None:intergenic |
| CAAAAGTTGCCTAACCTTCC+GGG | 0.374567 | 1.1:+81688449 | MS.gene046135:CDS |
| TGCTCTAGGTATGTTATATT+AGG | 0.377773 | 1.1:+81686857 | MS.gene046135:intron |
| GCAATGTTCGATTTGGTGTC+AGG | 0.378142 | 1.1:+81688093 | MS.gene046135:CDS |
| AAGCTTGCCAGGTGCTCTAT+TGG | 0.380074 | 1.1:-81688311 | None:intergenic |
| ACCCATGGGTTGTGCTCCAA+TGG | 0.386484 | 1.1:+81685733 | None:intergenic |
| GCATTGCTCGGAAGCTTGCC+AGG | 0.387618 | 1.1:-81688322 | None:intergenic |
| TTCTATTGAAGGTGTTGAAA+AGG | 0.389406 | 1.1:+81688475 | MS.gene046135:CDS |
| ACAAAGAAAGTTGCACAGTA+TGG | 0.395938 | 1.1:-81688173 | None:intergenic |
| TCGTGAATTACCTGCTGATT+GGG | 0.402483 | 1.1:+81687703 | MS.gene046135:CDS |
| ATTGAGGCGGGATCAACATT+TGG | 0.403681 | 1.1:+81688719 | MS.gene046135:CDS |
| CCGTGCAGCCAAGTGCTTCT+CGG | 0.404020 | 1.1:-81686681 | None:intergenic |
| GAAGAGCGCAATGTTCGATT+TGG | 0.405488 | 1.1:+81688086 | MS.gene046135:CDS |
| ACTTGGATGGCATGTGATTT+GGG | 0.407932 | 1.1:+81687039 | MS.gene046135:CDS |
| ATCGTGAATTACCTGCTGAT+TGG | 0.408577 | 1.1:+81687702 | MS.gene046135:CDS |
| GGGAAAATATACAAGGAGTA+TGG | 0.412527 | 1.1:+81688812 | MS.gene046135:CDS |
| CGTGTTCACTTGCCGGACAT+TGG | 0.412603 | 1.1:+81686915 | MS.gene046135:CDS |
| CAGGGTATTGCCAATGGTGT+TGG | 0.421847 | 1.1:+81686647 | MS.gene046135:CDS |
| CAGTGTTCACGGAGCTGCAT+TGG | 0.425068 | 1.1:+81687402 | MS.gene046135:CDS |
| GTTATGACCCATGATTCAAT+TGG | 0.427272 | 1.1:+81688260 | MS.gene046135:CDS |
| TAAACCAAGAAGGATTCTTT+GGG | 0.427395 | 1.1:-81685790 | None:intergenic |
| CTTGAAGCAGTTTCGACAAT+GGG | 0.430255 | 1.1:+81686438 | MS.gene046135:CDS |
| CCCGAGAACTTCGAGACATA+TGG | 0.433908 | 1.1:+81686481 | MS.gene046135:CDS |
| TTTGGTTGGCATAAGATTGT+TGG | 0.433955 | 1.1:+81688737 | MS.gene046135:CDS |
| TGATTGGGAGAAAGCACTTC+CGG | 0.439162 | 1.1:+81687718 | MS.gene046135:CDS |
| AGCAGAAATAACAGCTTCCT+TGG | 0.441956 | 1.1:-81688840 | None:intergenic |
| ATTAGGAGATGGTTGTCAAA+TGG | 0.442289 | 1.1:+81686874 | MS.gene046135:CDS |
| GGACGAAGCATCAAAACATT+TGG | 0.442772 | 1.1:-81688344 | None:intergenic |
| CTCCAAGTCCAATTGAATCA+TGG | 0.443401 | 1.1:-81688268 | None:intergenic |
| AGTGTTCACGGAGCTGCATT+GGG | 0.447236 | 1.1:+81687403 | MS.gene046135:CDS |
| ATAGAAGTTCCCGGAAGGTT+AGG | 0.449217 | 1.1:-81688458 | None:intergenic |
| ACTCTAGCTGTCACAGAAGC+AGG | 0.449310 | 1.1:-81688692 | None:intergenic |
| GGCACATGGAAAGGCTCATA+TGG | 0.449701 | 1.1:-81687466 | None:intergenic |
| GACCAGGAAGAACCTTGGCC+AGG | 0.451334 | 1.1:-81687983 | None:intergenic |
| ACACAAGGCAGAAATCCTTA+TGG | 0.451743 | 1.1:-81688219 | None:intergenic |
| CCGAGAAAGGGCAAGAATTG+AGG | 0.453215 | 1.1:-81688426 | None:intergenic |
| AGATTTCTTGTAGCATCAGC+AGG | 0.453550 | 1.1:-81687939 | None:intergenic |
| CCCATGGGTTGTGCTCCAAT+GGG | 0.456524 | 1.1:+81685734 | None:intergenic |
| ACCCATGATTCAATTGGACT+TGG | 0.457470 | 1.1:+81688266 | MS.gene046135:CDS |
| TGCTCTATTGGCTGATGAGT+TGG | 0.458639 | 1.1:-81688299 | None:intergenic |
| ACACCTTCAATAGAAGTTCC+CGG | 0.462136 | 1.1:-81688467 | None:intergenic |
| GATGCTACAAGGCAGAATCT+TGG | 0.465252 | 1.1:+81687439 | MS.gene046135:CDS |
| CTTCCGGGAACTTCTATTGA+AGG | 0.465653 | 1.1:+81688464 | MS.gene046135:CDS |
| CACAGTATGGAATGAATCCC+GGG | 0.466716 | 1.1:-81688160 | None:intergenic |
| TCCATATGTCTCGAAGTTCT+CGG | 0.472304 | 1.1:-81686482 | None:intergenic |
| ACCTGATGAGTTGTCTGAAA+TGG | 0.472367 | 1.1:-81688507 | None:intergenic |
| TGGGTAAAGAACGGAAATAC+TGG | 0.473280 | 1.1:+81687058 | MS.gene046135:CDS |
| GATAATCACATATCTATTGA+TGG | 0.473309 | 1.1:+81686968 | MS.gene046135:CDS |
| GTTCTTCCTGGTCTTATTGG+TGG | 0.473340 | 1.1:+81687993 | MS.gene046135:CDS |
| CAACAAAGTCATGTTGGAAG+AGG | 0.473739 | 1.1:-81688030 | None:intergenic |
| TAGATCATCAGCGGCGGCAG+CGG | 0.475603 | 1.1:-81688579 | None:intergenic |
| GCAGTTTCATTACCATCAGC+TGG | 0.477799 | 1.1:-81688365 | None:intergenic |
| TCTATTGAAGGTGTTGAAAA+GGG | 0.479009 | 1.1:+81688476 | MS.gene046135:CDS |
| CGAGAAAGGGCAAGAATTGA+GGG | 0.481642 | 1.1:-81688425 | None:intergenic |
| CCGAGAAGCACTTGGCTGCA+CGG | 0.482213 | 1.1:+81686681 | MS.gene046135:CDS |
| TCAATTGGACTTGGAGAGGA+TGG | 0.485462 | 1.1:+81688275 | MS.gene046135:CDS |
| GCTAATTCCTACAGTGTTCA+CGG | 0.486135 | 1.1:+81687391 | MS.gene046135:CDS |
| GTGCAGCACCCTCAGGGGTA+TGG | 0.486259 | 1.1:-81687598 | None:intergenic |
| ATTGGTTATCTCACGTGTAA+TGG | 0.488265 | 1.1:-81686733 | None:intergenic |
| ATTTCTGCCTTGTGTGAAGC+CGG | 0.489758 | 1.1:+81688227 | MS.gene046135:CDS |
| AGAGGAGGCTGCAGAGCTAA+AGG | 0.490701 | 1.1:+81687670 | MS.gene046135:CDS |
| CCATATGTCTCGAAGTTCTC+GGG | 0.492717 | 1.1:-81686481 | None:intergenic |
| TCGAAGTTCTCGGGATGTCC+AGG | 0.493290 | 1.1:-81686472 | None:intergenic |
| TCACTAACCTTAATCAAAGT+AGG | 0.493636 | 1.1:-81687133 | None:intergenic |
| TTTCGTTGTTTAGGTCCTCT+GGG | 0.495503 | 1.1:+81686623 | MS.gene046135:intron |
| TGACAGGTTACCACTACCAT+TGG | 0.495504 | 1.1:+81687349 | MS.gene046135:intron |
| TGGTATTGCTCTTCATAGCC+CGG | 0.502685 | 1.1:+81688142 | MS.gene046135:CDS |
| TGTTTAGGTCCTCTGGGTCA+GGG | 0.504143 | 1.1:+81686629 | MS.gene046135:intron |
| TGGTCAACAATCTCACTGTC+AGG | 0.504469 | 1.1:-81686713 | None:intergenic |
| ACATCTTCTGGCACATGGAA+AGG | 0.505808 | 1.1:-81687475 | None:intergenic |
| GTTCCAATCAAAATAACATC+AGG | 0.510531 | 1.1:-81688536 | None:intergenic |
| TCCAAGTCCAATTGAATCAT+GGG | 0.511215 | 1.1:-81688267 | None:intergenic |
| GGCACTTGCCGAGAAGCACT+TGG | 0.512393 | 1.1:+81686673 | MS.gene046135:CDS |
| CTTTCCAAGACCCCAATGTC+CGG | 0.512394 | 1.1:-81686927 | None:intergenic |
| CATAAGATTGTTGGAAGCAA+GGG | 0.513540 | 1.1:+81688746 | MS.gene046135:CDS |
| ACCATTTCAGACAACTCATC+AGG | 0.514190 | 1.1:+81688506 | MS.gene046135:CDS |
| GATTGGAACTGGTTCTGAGT+TGG | 0.514884 | 1.1:+81688550 | MS.gene046135:CDS |
| AGGCGGGATCAACATTTGGT+TGG | 0.515586 | 1.1:+81688723 | MS.gene046135:CDS |
| TTTGGAGCAAGTGCTCCAGC+AGG | 0.522166 | 1.1:+81688791 | MS.gene046135:CDS |
| TCAAAACATTTGGCATTGCT+CGG | 0.524118 | 1.1:-81688334 | None:intergenic |
| CGATTTCAACAAAGTCATGT+TGG | 0.524839 | 1.1:-81688036 | None:intergenic |
| CTGGGTCAGGGTATTGCCAA+TGG | 0.525385 | 1.1:+81686641 | MS.gene046135:CDS |
| TGGTGTCAGGGAACACGCAA+TGG | 0.526615 | 1.1:+81688106 | MS.gene046135:CDS |
| ATCGTTTGGAGATTTCCAAA+AGG | 0.533264 | 1.1:+81688055 | MS.gene046135:CDS |
| CTTCGAGTGCAGCACCCTCA+GGG | 0.535328 | 1.1:-81687604 | None:intergenic |
| GGTATTGCTCTTCATAGCCC+GGG | 0.537364 | 1.1:+81688143 | MS.gene046135:CDS |
| GCACAGTATGGAATGAATCC+CGG | 0.542998 | 1.1:-81688161 | None:intergenic |
| ACTACATGAGAGCTGCCATA+AGG | 0.547176 | 1.1:+81688204 | MS.gene046135:CDS |
| GCATAAGATTGTTGGAAGCA+AGG | 0.550996 | 1.1:+81688745 | MS.gene046135:CDS |
| TTCTTTCCTTAGATCATCAG+CGG | 0.551042 | 1.1:-81688588 | None:intergenic |
| TATTGCCAATGGTGTTGGAT+TGG | 0.553474 | 1.1:+81686652 | MS.gene046135:CDS |
| ACCCATTGGAGCACAACCCA+TGG | 0.554735 | 1.1:-81685735 | None:intergenic |
| CAATGGGGAAGCAAAACTCC+TGG | 0.558532 | 1.1:+81686454 | MS.gene046135:CDS |
| ACCAGGAAGAACCTTGGCCA+GGG | 0.559298 | 1.1:-81687982 | None:intergenic |
| GGTGTCAGGGAACACGCAAT+GGG | 0.559362 | 1.1:+81688107 | MS.gene046135:CDS |
| TTGATGCTTCGTCCAGCTGA+TGG | 0.563709 | 1.1:+81688353 | MS.gene046135:CDS |
| CTAAAGAAGTAGATGCTACA+AGG | 0.563711 | 1.1:+81687428 | MS.gene046135:CDS |
| AGTGCTTTCTCCCAATCAGC+AGG | 0.564870 | 1.1:-81687713 | None:intergenic |
| GCTAGAGTCAGCATTGAGGC+GGG | 0.565493 | 1.1:+81688707 | MS.gene046135:CDS |
| GCTGATGATCTAAGGAAAGA+AGG | 0.567319 | 1.1:+81688590 | MS.gene046135:CDS |
| CGATCACGATTAAACCAAGA+AGG | 0.567796 | 1.1:-81685800 | None:intergenic |
| AGGTATGTTATATTAGGAGA+TGG | 0.568803 | 1.1:+81686863 | MS.gene046135:intron |
| AAATCTAAATGCCCTGGCCA+AGG | 0.569724 | 1.1:+81687971 | MS.gene046135:CDS |
| TCGTATAGAATGTGACCCAT+TGG | 0.570278 | 1.1:-81685749 | None:intergenic |
| ACAGCAAAATCTAAATGCCC+TGG | 0.570304 | 1.1:+81687965 | MS.gene046135:CDS |
| AGAACCAAATCCAATGGTAG+TGG | 0.571113 | 1.1:-81687359 | None:intergenic |
| TGATCAGTCAGATGAATACA+AGG | 0.572341 | 1.1:+81688658 | MS.gene046135:CDS |
| TCATCAGCCAATAGAGCACC+TGG | 0.576120 | 1.1:+81688304 | MS.gene046135:CDS |
| CAATGTTCGATTTGGTGTCA+GGG | 0.577817 | 1.1:+81688094 | MS.gene046135:CDS |
| GGAGATGGTTGTCAAATGGA+AGG | 0.581318 | 1.1:+81686878 | MS.gene046135:CDS |
| GCTGATGGTAATGAAACTGC+TGG | 0.585057 | 1.1:+81688368 | MS.gene046135:CDS |
| GTTTGGAGAACCAAATCCAA+TGG | 0.585421 | 1.1:-81687365 | None:intergenic |
| TGGAGTCGCCATACCCCTGA+GGG | 0.588668 | 1.1:+81687590 | MS.gene046135:CDS |
| AGCTAGAGTCAGCATTGAGG+CGG | 0.588951 | 1.1:+81688706 | MS.gene046135:CDS |
| ACTTGAAGCAGTTTCGACAA+TGG | 0.594500 | 1.1:+81686437 | MS.gene046135:CDS |
| CTCTAGCTGTCACAGAAGCA+GGG | 0.598577 | 1.1:-81688691 | None:intergenic |
| GGTCATAACATAAATAACTC+CGG | 0.599500 | 1.1:-81688246 | None:intergenic |
| TGCAGCCATTAAGGAAGCAA+AGG | 0.600893 | 1.1:+81687096 | MS.gene046135:CDS |
| TGATTCAATTGGACTTGGAG+AGG | 0.602455 | 1.1:+81688271 | MS.gene046135:CDS |
| TGTTCACTTGCCGGACATTG+GGG | 0.608345 | 1.1:+81686917 | MS.gene046135:CDS |
| TATGGCAGCTCTCATGTAGT+CGG | 0.609330 | 1.1:-81688201 | None:intergenic |
| AAGTGCCAATCCAACACCAT+TGG | 0.610021 | 1.1:-81686657 | None:intergenic |
| TCCAAATCGATCAATGCCAA+TGG | 0.610681 | 1.1:-81688774 | None:intergenic |
| CAACTTTCAGACTTACACTC+CGG | 0.611225 | 1.1:+81687911 | MS.gene046135:intron |
| CCCATTGGAGCACAACCCAT+GGG | 0.612164 | 1.1:-81685734 | None:intergenic |
| ATTGAAGGTGTTGAAAAGGG+TGG | 0.614729 | 1.1:+81688479 | MS.gene046135:CDS |
| GATTTCTTGTAGCATCAGCA+GGG | 0.614806 | 1.1:-81687938 | None:intergenic |
| AATAAGACCAGGAAGAACCT+TGG | 0.616495 | 1.1:-81687988 | None:intergenic |
| AATAACTCCGGCTTCACACA+AGG | 0.617620 | 1.1:-81688234 | None:intergenic |
| CTACAAGGCAGAATCTTGGA+TGG | 0.619439 | 1.1:+81687443 | MS.gene046135:CDS |
| GGGTCTCTTCTGGTTAAGCA+CGG | 0.620082 | 1.1:-81688405 | None:intergenic |
| TCCAGCAGGGAAAATATACA+AGG | 0.623690 | 1.1:+81688805 | MS.gene046135:CDS |
| CATGTGATTTGGGTAAAGAA+CGG | 0.627359 | 1.1:+81687049 | MS.gene046135:CDS |
| TGAGAAGAAATACAAAGAGG+AGG | 0.628944 | 1.1:+81687655 | MS.gene046135:CDS |
| TGCTGGTTATGACAGTGTCA+AGG | 0.631432 | 1.1:+81685877 | MS.gene046135:CDS |
| TGCAGCTCCGTGAACACTGT+AGG | 0.641746 | 1.1:-81687398 | None:intergenic |
| TATGGAATTGAAGTCACCAC+AGG | 0.643063 | 1.1:+81686499 | MS.gene046135:CDS |
| GTGCTGCACTCGAAGCTGAG+TGG | 0.649503 | 1.1:+81687612 | MS.gene046135:CDS |
| TTGGAGTCGCCATACCCCTG+AGG | 0.652993 | 1.1:+81687589 | MS.gene046135:CDS |
| GCAATGGGAGCAATCTGCAA+TGG | 0.655788 | 1.1:+81688122 | MS.gene046135:CDS |
| TTGGAGCAAGTGCTCCAGCA+GGG | 0.659920 | 1.1:+81688792 | MS.gene046135:CDS |
| TTCGAGTGCAGCACCCTCAG+GGG | 0.661757 | 1.1:-81687603 | None:intergenic |
| GCACTGCCACCAATAAGACC+AGG | 0.667283 | 1.1:-81687999 | None:intergenic |
| CTTCAATAGAAGTTCCCGGA+AGG | 0.667722 | 1.1:-81688463 | None:intergenic |
| TTGAAGCAGTTTCGACAATG+GGG | 0.670618 | 1.1:+81686439 | MS.gene046135:CDS |
| ATTTCTTGTAGCATCAGCAG+GGG | 0.674247 | 1.1:-81687937 | None:intergenic |
| GTATGAGAAGAAATACAAAG+AGG | 0.678342 | 1.1:+81687652 | MS.gene046135:CDS |
| GACAGCTAGAGTCAGCATTG+AGG | 0.680303 | 1.1:+81688703 | MS.gene046135:CDS |
| CAAGGAGTATGGCATAACCA+AGG | 0.693332 | 1.1:+81688823 | MS.gene046135:CDS |
| TTTCCTTAGATCATCAGCGG+CGG | 0.694677 | 1.1:-81688585 | None:intergenic |
| TTGGCAATACCCTGACCCAG+AGG | 0.713966 | 1.1:-81686638 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAGATAAAATATTGAAATT+TGG | - | chr1.1:81685983-81686002 | None:intergenic | 10.0% |
| !!! | TGAAAATTACTTTAATATTT+TGG | + | chr1.1:81686198-81686217 | MS.gene046135:intron | 10.0% |
| !! | TAATCAATTTATCTATAACA+TGG | - | chr1.1:81687196-81687215 | None:intergenic | 15.0% |
| !! | TATAGATAAATTGATTATAC+TGG | + | chr1.1:81687199-81687218 | MS.gene046135:intron | 15.0% |
| !!! | GTTGTTATATCATTTTTATT+TGG | + | chr1.1:81687278-81687297 | MS.gene046135:intron | 15.0% |
| !! | AATTTATCTATAACATGGAT+TGG | - | chr1.1:81687191-81687210 | None:intergenic | 20.0% |
| !! | ATTTATCTATAACATGGATT+GGG | - | chr1.1:81687190-81687209 | None:intergenic | 20.0% |
| !! | TTAAAATTGAAAATCTGCAA+TGG | + | chr1.1:81686075-81686094 | MS.gene046135:intron | 20.0% |
| !!! | AAGATGTTAAAAAGTATGAA+TGG | + | chr1.1:81687491-81687510 | MS.gene046135:intron | 20.0% |
| !!! | AATTTTGATTACTATTTGAC+AGG | + | chr1.1:81687333-81687352 | MS.gene046135:intron | 20.0% |
| !!! | AGATGTTAAAAAGTATGAAT+GGG | + | chr1.1:81687492-81687511 | MS.gene046135:intron | 20.0% |
| !!! | ATTACTTTAATATTTTGGCT+TGG | + | chr1.1:81686203-81686222 | MS.gene046135:intron | 20.0% |
| !!! | TTATCTTTTGCTTTTGTTTT+TGG | + | chr1.1:81686832-81686851 | MS.gene046135:intron | 20.0% |
| !!! | TTCTATTACTTTTAAACTTG+TGG | + | chr1.1:81686019-81686038 | MS.gene046135:intron | 20.0% |
| !!! | TTTGGGTTGAATAAAATAAT+AGG | + | chr1.1:81686408-81686427 | MS.gene046135:intron | 20.0% |
| ! | AACAAGTAACAAGATGTAAT+TGG | - | chr1.1:81686754-81686773 | None:intergenic | 25.0% |
| ! | GATAATCACATATCTATTGA+TGG | + | chr1.1:81686968-81686987 | MS.gene046135:CDS | 25.0% |
| ! | TAGTAATGAAATTGTTAGTC+AGG | - | chr1.1:81686329-81686348 | None:intergenic | 25.0% |
| !! | AAGTATTTTTCTCCTTTGTT+TGG | - | chr1.1:81686124-81686143 | None:intergenic | 25.0% |
| !!! | TCATACTTTTTAACATCTTC+TGG | - | chr1.1:81687490-81687509 | None:intergenic | 25.0% |
| !!! | TGTTATTTTTATAAGACCTG+TGG | - | chr1.1:81686518-81686537 | None:intergenic | 25.0% |
| !!! | TTTCTATTGATTTTGTCTTG+AGG | + | chr1.1:81687765-81687784 | MS.gene046135:intron | 25.0% |
| AAAGTAAACCTTTCCTTTCT+TGG | + | chr1.1:81687253-81687272 | MS.gene046135:intron | 30.0% | |
| AAGTAAACCTTTCCTTTCTT+GGG | + | chr1.1:81687254-81687273 | MS.gene046135:intron | 30.0% | |
| ACCTAAACAACGAAAATACA+AGG | - | chr1.1:81686618-81686637 | None:intergenic | 30.0% | |
| AGACAAACCTACTTTGATTA+AGG | + | chr1.1:81687126-81687145 | MS.gene046135:CDS | 30.0% | |
| AGCAGTCAAAATTCAAAAGT+AGG | - | chr1.1:81687814-81687833 | None:intergenic | 30.0% | |
| AGGTATGTTATATTAGGAGA+TGG | + | chr1.1:81686863-81686882 | MS.gene046135:intron | 30.0% | |
| AGTTGAGAAGAGAAGTAAAT+TGG | - | chr1.1:81685957-81685976 | None:intergenic | 30.0% | |
| ATAGGTTCAAATCCAAACAA+AGG | + | chr1.1:81686109-81686128 | MS.gene046135:intron | 30.0% | |
| ATGACTTTGTTGAAATCGTT+TGG | + | chr1.1:81688041-81688060 | MS.gene046135:CDS | 30.0% | |
| CAAGATCATGAAAATATCAG+TGG | - | chr1.1:81687540-81687559 | None:intergenic | 30.0% | |
| CATTACAGAAGAAGCAAAAA+AGG | - | chr1.1:81686583-81686602 | None:intergenic | 30.0% | |
| GGTCATAACATAAATAACTC+CGG | - | chr1.1:81688249-81688268 | None:intergenic | 30.0% | |
| GTATGAGAAGAAATACAAAG+AGG | + | chr1.1:81687652-81687671 | MS.gene046135:CDS | 30.0% | |
| GTTCCAATCAAAATAACATC+AGG | - | chr1.1:81688539-81688558 | None:intergenic | 30.0% | |
| TAAACCAAGAAGGATTCTTT+GGG | - | chr1.1:81685793-81685812 | None:intergenic | 30.0% | |
| TAAATGTCACATTACGAATC+AGG | - | chr1.1:81686815-81686834 | None:intergenic | 30.0% | |
| TAATGAATTGATATGCACAG+TGG | + | chr1.1:81686349-81686368 | MS.gene046135:intron | 30.0% | |
| TCACTAACCTTAATCAAAGT+AGG | - | chr1.1:81687136-81687155 | None:intergenic | 30.0% | |
| TCTGAAAGTTGAAGTCAAAT+TGG | - | chr1.1:81687902-81687921 | None:intergenic | 30.0% | |
| TGAAATTTATCTAATCCCAC+AGG | - | chr1.1:81686045-81686064 | None:intergenic | 30.0% | |
| TGTGATCAATATTCCACAAA+TGG | - | chr1.1:81687876-81687895 | None:intergenic | 30.0% | |
| TTAAACCAAGAAGGATTCTT+TGG | - | chr1.1:81685794-81685813 | None:intergenic | 30.0% | |
| TTAAGGTTAGTGACATGAAA+TGG | + | chr1.1:81687143-81687162 | MS.gene046135:intron | 30.0% | |
| ! | TCCTTGTATTTTCGTTGTTT+AGG | + | chr1.1:81686614-81686633 | MS.gene046135:intron | 30.0% |
| ! | TGCTCTAGGTATGTTATATT+AGG | + | chr1.1:81686857-81686876 | MS.gene046135:intron | 30.0% |
| !! | GAGTAAAGTGTCATACTTTT+TGG | + | chr1.1:81687742-81687761 | MS.gene046135:intron | 30.0% |
| !! | TCTATTGAAGGTGTTGAAAA+GGG | + | chr1.1:81688476-81688495 | MS.gene046135:CDS | 30.0% |
| !! | TTCTATTGAAGGTGTTGAAA+AGG | + | chr1.1:81688475-81688494 | MS.gene046135:CDS | 30.0% |
| !! | TTTTTATTTGGTTTCGATGC+TGG | + | chr1.1:81687290-81687309 | MS.gene046135:intron | 30.0% |
| !!! | AAGCCTGATGTTATTTTGAT+TGG | + | chr1.1:81688533-81688552 | MS.gene046135:CDS | 30.0% |
| !!! | AGTTGTTTCTTTTGTTAGCT+GGG | + | chr1.1:81688625-81688644 | MS.gene046135:CDS | 30.0% |
| !!! | GATGTTATTTTGATTGGAAC+TGG | + | chr1.1:81688539-81688558 | MS.gene046135:CDS | 30.0% |
| AAAAAAGGCTCACAGTAACA+TGG | - | chr1.1:81686568-81686587 | None:intergenic | 35.0% | |
| AAGTATGACACTTTACTCAC+CGG | - | chr1.1:81687740-81687759 | None:intergenic | 35.0% | |
| ACAAAGAAAGTTGCACAGTA+TGG | - | chr1.1:81688176-81688195 | None:intergenic | 35.0% | |
| AGAGAAGTAAATTGGTTGGT+TGG | - | chr1.1:81685949-81685968 | None:intergenic | 35.0% | |
| ATAACCCAAAGAATCCTTCT+TGG | + | chr1.1:81685786-81685805 | MS.gene046135:CDS | 35.0% | |
| ATCGTTTGGAGATTTCCAAA+AGG | + | chr1.1:81688055-81688074 | MS.gene046135:CDS | 35.0% | |
| ATTAGGAGATGGTTGTCAAA+TGG | + | chr1.1:81686874-81686893 | MS.gene046135:CDS | 35.0% | |
| ATTGGTTATCTCACGTGTAA+TGG | - | chr1.1:81686736-81686755 | None:intergenic | 35.0% | |
| ATTGTTCCTGATAGCTTATG+TGG | + | chr1.1:81686242-81686261 | MS.gene046135:intron | 35.0% | |
| CATAAGATTGTTGGAAGCAA+GGG | + | chr1.1:81688746-81688765 | MS.gene046135:CDS | 35.0% | |
| CGATTTCAACAAAGTCATGT+TGG | - | chr1.1:81688039-81688058 | None:intergenic | 35.0% | |
| CTAAAGAAGTAGATGCTACA+AGG | + | chr1.1:81687428-81687447 | MS.gene046135:CDS | 35.0% | |
| GAAATGGAAATTCAAGCAAG+TGG | + | chr1.1:81687159-81687178 | MS.gene046135:intron | 35.0% | |
| GAGAAGAGAAGTAAATTGGT+TGG | - | chr1.1:81685953-81685972 | None:intergenic | 35.0% | |
| GATATAACAACACCCAAGAA+AGG | - | chr1.1:81687269-81687288 | None:intergenic | 35.0% | |
| GGGAAAATATACAAGGAGTA+TGG | + | chr1.1:81688812-81688831 | MS.gene046135:CDS | 35.0% | |
| GTTATGACCCATGATTCAAT+TGG | + | chr1.1:81688260-81688279 | MS.gene046135:CDS | 35.0% | |
| TAACCTGCTTAACATTCCTT+AGG | + | chr1.1:81687564-81687583 | MS.gene046135:intron | 35.0% | |
| TCAAAACATTTGGCATTGCT+CGG | - | chr1.1:81688337-81688356 | None:intergenic | 35.0% | |
| TCCAAGTCCAATTGAATCAT+GGG | - | chr1.1:81688270-81688289 | None:intergenic | 35.0% | |
| TGACATAATGTGACTGTTGA+GGG | + | chr1.1:81687228-81687247 | MS.gene046135:intron | 35.0% | |
| TGAGAAGAAATACAAAGAGG+AGG | + | chr1.1:81687655-81687674 | MS.gene046135:CDS | 35.0% | |
| TGAGTTCTATCAACCATTTG+TGG | + | chr1.1:81687860-81687879 | MS.gene046135:intron | 35.0% | |
| TGATCAGTCAGATGAATACA+AGG | + | chr1.1:81688658-81688677 | MS.gene046135:CDS | 35.0% | |
| TTCTTTCCTTAGATCATCAG+CGG | - | chr1.1:81688591-81688610 | None:intergenic | 35.0% | |
| TTGAAAATCTGCAATGGAGT+TGG | + | chr1.1:81686081-81686100 | MS.gene046135:intron | 35.0% | |
| TTTGGTTGGCATAAGATTGT+TGG | + | chr1.1:81688737-81688756 | MS.gene046135:CDS | 35.0% | |
| ! | AAGTAAATTGGTTGGTTGGT+TGG | - | chr1.1:81685945-81685964 | None:intergenic | 35.0% |
| ! | CATGTGATTTGGGTAAAGAA+CGG | + | chr1.1:81687049-81687068 | MS.gene046135:CDS | 35.0% |
| ! | GAATGTTGATCAACGTTTTG+AGG | + | chr1.1:81687015-81687034 | MS.gene046135:CDS | 35.0% |
| ! | TTTTAACATCTTCTGGCACA+TGG | - | chr1.1:81687483-81687502 | None:intergenic | 35.0% |
| !! | CTGTAGGAATTAGCTTTGTT+TGG | - | chr1.1:81687385-81687404 | None:intergenic | 35.0% |
| !! | GAGCTGAATTTGTTGTGTTT+GGG | + | chr1.1:81686391-81686410 | MS.gene046135:intron | 35.0% |
| !! | TGAGCTGAATTTGTTGTGTT+TGG | + | chr1.1:81686390-81686409 | MS.gene046135:intron | 35.0% |
| !!! | GAGTTGTTTCTTTTGTTAGC+TGG | + | chr1.1:81688624-81688643 | MS.gene046135:CDS | 35.0% |
| !!! | TTTTGTTTTTGGTCTGCTCT+AGG | + | chr1.1:81686843-81686862 | MS.gene046135:intron | 35.0% |
| AAAATCTGCAATGGAGTTGG+AGG | + | chr1.1:81686084-81686103 | MS.gene046135:intron | 40.0% | |
| AACAACACCCAAGAAAGGAA+AGG | - | chr1.1:81687264-81687283 | None:intergenic | 40.0% | |
| AATAAGACCAGGAAGAACCT+TGG | - | chr1.1:81687991-81688010 | None:intergenic | 40.0% | |
| ACACAAGGCAGAAATCCTTA+TGG | - | chr1.1:81688222-81688241 | None:intergenic | 40.0% | |
| ACACCTTCAATAGAAGTTCC+CGG | - | chr1.1:81688470-81688489 | None:intergenic | 40.0% | |
| ACAGCAAAATCTAAATGCCC+TGG | + | chr1.1:81687965-81687984 | MS.gene046135:CDS | 40.0% | |
| ACCATTTCAGACAACTCATC+AGG | + | chr1.1:81688506-81688525 | MS.gene046135:CDS | 40.0% | |
| ACCCATGATTCAATTGGACT+TGG | + | chr1.1:81688266-81688285 | MS.gene046135:CDS | 40.0% | |
| ACCTGATGAGTTGTCTGAAA+TGG | - | chr1.1:81688510-81688529 | None:intergenic | 40.0% | |
| ACTTGAAGCAGTTTCGACAA+TGG | + | chr1.1:81686437-81686456 | MS.gene046135:CDS | 40.0% | |
| ACTTGGATGGCATGTGATTT+GGG | + | chr1.1:81687039-81687058 | MS.gene046135:CDS | 40.0% | |
| AGAACCAAATCCAATGGTAG+TGG | - | chr1.1:81687362-81687381 | None:intergenic | 40.0% | |
| AGATTTCTTGTAGCATCAGC+AGG | - | chr1.1:81687942-81687961 | None:intergenic | 40.0% | |
| AGCAGAAATAACAGCTTCCT+TGG | - | chr1.1:81688843-81688862 | None:intergenic | 40.0% | |
| ATCGTGAATTACCTGCTGAT+TGG | + | chr1.1:81687702-81687721 | MS.gene046135:CDS | 40.0% | |
| ATGCCTAAGGAATGTTAAGC+AGG | - | chr1.1:81687570-81687589 | None:intergenic | 40.0% | |
| ATTTCTTGTAGCATCAGCAG+GGG | - | chr1.1:81687940-81687959 | None:intergenic | 40.0% | |
| CAACAAAGTCATGTTGGAAG+AGG | - | chr1.1:81688033-81688052 | None:intergenic | 40.0% | |
| CAACTTTCAGACTTACACTC+CGG | + | chr1.1:81687911-81687930 | MS.gene046135:intron | 40.0% | |
| CGATCACGATTAAACCAAGA+AGG | - | chr1.1:81685803-81685822 | None:intergenic | 40.0% | |
| CTCCAAGTCCAATTGAATCA+TGG | - | chr1.1:81688271-81688290 | None:intergenic | 40.0% | |
| CTTGAAGCAGTTTCGACAAT+GGG | + | chr1.1:81686438-81686457 | MS.gene046135:CDS | 40.0% | |
| GATTTCTTGTAGCATCAGCA+GGG | - | chr1.1:81687941-81687960 | None:intergenic | 40.0% | |
| GCATAAGATTGTTGGAAGCA+AGG | + | chr1.1:81688745-81688764 | MS.gene046135:CDS | 40.0% | |
| GCTAATTCCTACAGTGTTCA+CGG | + | chr1.1:81687391-81687410 | MS.gene046135:CDS | 40.0% | |
| GCTGATGATCTAAGGAAAGA+AGG | + | chr1.1:81688590-81688609 | MS.gene046135:CDS | 40.0% | |
| GCTTAACATTCCTTAGGCAT+TGG | + | chr1.1:81687570-81687589 | MS.gene046135:intron | 40.0% | |
| GTGACATAATGTGACTGTTG+AGG | + | chr1.1:81687227-81687246 | MS.gene046135:intron | 40.0% | |
| GTTACCACTACCATTGGATT+TGG | + | chr1.1:81687355-81687374 | MS.gene046135:CDS | 40.0% | |
| GTTTGGAGAACCAAATCCAA+TGG | - | chr1.1:81687368-81687387 | None:intergenic | 40.0% | |
| TATGCTCTTCTTCATCTTGC+TGG | + | chr1.1:81685860-81685879 | MS.gene046135:CDS | 40.0% | |
| TATGGAATTGAAGTCACCAC+AGG | + | chr1.1:81686499-81686518 | MS.gene046135:CDS | 40.0% | |
| TCCAAATCGATCAATGCCAA+TGG | - | chr1.1:81688777-81688796 | None:intergenic | 40.0% | |
| TCCAGCAGGGAAAATATACA+AGG | + | chr1.1:81688805-81688824 | MS.gene046135:CDS | 40.0% | |
| TCCATATGTCTCGAAGTTCT+CGG | - | chr1.1:81686485-81686504 | None:intergenic | 40.0% | |
| TCGTATAGAATGTGACCCAT+TGG | - | chr1.1:81685752-81685771 | None:intergenic | 40.0% | |
| TGAAATTCGTGCAGCCATTA+AGG | + | chr1.1:81687087-81687106 | MS.gene046135:CDS | 40.0% | |
| TGATTCAATTGGACTTGGAG+AGG | + | chr1.1:81688271-81688290 | MS.gene046135:CDS | 40.0% | |
| TGGGTAAAGAACGGAAATAC+TGG | + | chr1.1:81687058-81687077 | MS.gene046135:CDS | 40.0% | |
| TTGAAGCAGTTTCGACAATG+GGG | + | chr1.1:81686439-81686458 | MS.gene046135:CDS | 40.0% | |
| TTTCGTTGTTTAGGTCCTCT+GGG | + | chr1.1:81686623-81686642 | MS.gene046135:intron | 40.0% | |
| TTTCTGCCACATAAGCTATC+AGG | - | chr1.1:81686251-81686270 | None:intergenic | 40.0% | |
| ! | ACTTTTAAACTTGTGGCCTG+TGG | + | chr1.1:81686026-81686045 | MS.gene046135:intron | 40.0% |
| ! | CTTTTAAACTTGTGGCCTGT+GGG | + | chr1.1:81686027-81686046 | MS.gene046135:intron | 40.0% |
| ! | GGACGAAGCATCAAAACATT+TGG | - | chr1.1:81688347-81688366 | None:intergenic | 40.0% |
| ! | TATTGCCAATGGTGTTGGAT+TGG | + | chr1.1:81686652-81686671 | MS.gene046135:CDS | 40.0% |
| ! | TCCTTGTATATTTTCCCTGC+TGG | - | chr1.1:81688809-81688828 | None:intergenic | 40.0% |
| ! | TCGTGAATTACCTGCTGATT+GGG | + | chr1.1:81687703-81687722 | MS.gene046135:CDS | 40.0% |
| ! | TTTTCGTTGTTTAGGTCCTC+TGG | + | chr1.1:81686622-81686641 | MS.gene046135:intron | 40.0% |
| !! | AAGGTTCTTCCTGGTCTTAT+TGG | + | chr1.1:81687990-81688009 | MS.gene046135:CDS | 40.0% |
| !! | ACCATTGGCATTGATCGATT+TGG | + | chr1.1:81688773-81688792 | MS.gene046135:CDS | 40.0% |
| !! | ATTGAAGGTGTTGAAAAGGG+TGG | + | chr1.1:81688479-81688498 | MS.gene046135:CDS | 40.0% |
| !! | CAATGTTCGATTTGGTGTCA+GGG | + | chr1.1:81688094-81688113 | MS.gene046135:CDS | 40.0% |
| !!! | TTTGTTTTGTCTGCTGGACA+TGG | + | chr1.1:81685824-81685843 | MS.gene046135:CDS | 40.0% |
| AAATCTAAATGCCCTGGCCA+AGG | + | chr1.1:81687971-81687990 | MS.gene046135:CDS | 45.0% | |
| AAGTGCCAATCCAACACCAT+TGG | - | chr1.1:81686660-81686679 | None:intergenic | 45.0% | |
| AATAACTCCGGCTTCACACA+AGG | - | chr1.1:81688237-81688256 | None:intergenic | 45.0% | |
| AATCGAACATTGCGCTCTTC+TGG | - | chr1.1:81688086-81688105 | None:intergenic | 45.0% | |
| AATGAAGCGTGTTCACTTGC+CGG | + | chr1.1:81686908-81686927 | MS.gene046135:CDS | 45.0% | |
| ACATCTTCTGGCACATGGAA+AGG | - | chr1.1:81687478-81687497 | None:intergenic | 45.0% | |
| ACTACATGAGAGCTGCCATA+AGG | + | chr1.1:81688204-81688223 | MS.gene046135:CDS | 45.0% | |
| ATAGAAGTTCCCGGAAGGTT+AGG | - | chr1.1:81688461-81688480 | None:intergenic | 45.0% | |
| ATTGAGGCGGGATCAACATT+TGG | + | chr1.1:81688719-81688738 | MS.gene046135:CDS | 45.0% | |
| ATTTCTGCCTTGTGTGAAGC+CGG | + | chr1.1:81688227-81688246 | MS.gene046135:CDS | 45.0% | |
| CAAAAGTTGCCTAACCTTCC+GGG | + | chr1.1:81688449-81688468 | MS.gene046135:CDS | 45.0% | |
| CAAGAATTGAGGGTCTCTTC+TGG | - | chr1.1:81688418-81688437 | None:intergenic | 45.0% | |
| CACAGTATGGAATGAATCCC+GGG | - | chr1.1:81688163-81688182 | None:intergenic | 45.0% | |
| CACTTGGATGGCATGTGATT+TGG | + | chr1.1:81687038-81687057 | MS.gene046135:CDS | 45.0% | |
| CCATATGTCTCGAAGTTCTC+GGG | - | chr1.1:81686484-81686503 | None:intergenic | 45.0% | |
| CCTCAATTCTTGCCCTTTCT+CGG | + | chr1.1:81688426-81688445 | MS.gene046135:CDS | 45.0% | |
| CGAGAAAGGGCAAGAATTGA+GGG | - | chr1.1:81688428-81688447 | None:intergenic | 45.0% | |
| CTACAAGGCAGAATCTTGGA+TGG | + | chr1.1:81687443-81687462 | MS.gene046135:CDS | 45.0% | |
| CTTCAATAGAAGTTCCCGGA+AGG | - | chr1.1:81688466-81688485 | None:intergenic | 45.0% | |
| CTTCCGGGAACTTCTATTGA+AGG | + | chr1.1:81688464-81688483 | MS.gene046135:CDS | 45.0% | |
| GACAGCCTTTGCTTCCTTAA+TGG | - | chr1.1:81687104-81687123 | None:intergenic | 45.0% | |
| GATGCTACAAGGCAGAATCT+TGG | + | chr1.1:81687439-81687458 | MS.gene046135:CDS | 45.0% | |
| GCAAAAGTTGCCTAACCTTC+CGG | + | chr1.1:81688448-81688467 | MS.gene046135:CDS | 45.0% | |
| GCACAGTATGGAATGAATCC+CGG | - | chr1.1:81688164-81688183 | None:intergenic | 45.0% | |
| GCAGTTTCATTACCATCAGC+TGG | - | chr1.1:81688368-81688387 | None:intergenic | 45.0% | |
| GGAAGCAAGGGAAAAACCAT+TGG | + | chr1.1:81688758-81688777 | MS.gene046135:CDS | 45.0% | |
| GGAGATGGTTGTCAAATGGA+AGG | + | chr1.1:81686878-81686897 | MS.gene046135:CDS | 45.0% | |
| TATGGCAGCTCTCATGTAGT+CGG | - | chr1.1:81688204-81688223 | None:intergenic | 45.0% | |
| TCAATTGGACTTGGAGAGGA+TGG | + | chr1.1:81688275-81688294 | MS.gene046135:CDS | 45.0% | |
| TGACAGGTTACCACTACCAT+TGG | + | chr1.1:81687349-81687368 | MS.gene046135:intron | 45.0% | |
| TGCAGCCATTAAGGAAGCAA+AGG | + | chr1.1:81687096-81687115 | MS.gene046135:CDS | 45.0% | |
| TGGTATTGCTCTTCATAGCC+CGG | + | chr1.1:81688142-81688161 | MS.gene046135:CDS | 45.0% | |
| TGGTCAACAATCTCACTGTC+AGG | - | chr1.1:81686716-81686735 | None:intergenic | 45.0% | |
| TTTCCTTAGATCATCAGCGG+CGG | - | chr1.1:81688588-81688607 | None:intergenic | 45.0% | |
| ! | AGGCAACTTTTGCCGAGAAA+GGG | - | chr1.1:81688441-81688460 | None:intergenic | 45.0% |
| ! | CAAGGAGTATGGCATAACCA+AGG | + | chr1.1:81688823-81688842 | MS.gene046135:CDS | 45.0% |
| ! | GAAGAGCGCAATGTTCGATT+TGG | + | chr1.1:81688086-81688105 | MS.gene046135:CDS | 45.0% |
| ! | GCTGATGGTAATGAAACTGC+TGG | + | chr1.1:81688368-81688387 | MS.gene046135:CDS | 45.0% |
| ! | TAGGCAACTTTTGCCGAGAA+AGG | - | chr1.1:81688442-81688461 | None:intergenic | 45.0% |
| ! | TGCTCTATTGGCTGATGAGT+TGG | - | chr1.1:81688302-81688321 | None:intergenic | 45.0% |
| ! | TGCTGGTTATGACAGTGTCA+AGG | + | chr1.1:81685877-81685896 | MS.gene046135:CDS | 45.0% |
| !! | GATTGGAACTGGTTCTGAGT+TGG | + | chr1.1:81688550-81688569 | MS.gene046135:CDS | 45.0% |
| !! | GCAATGTTCGATTTGGTGTC+AGG | + | chr1.1:81688093-81688112 | MS.gene046135:CDS | 45.0% |
| !! | GTTCTTCCTGGTCTTATTGG+TGG | + | chr1.1:81687993-81688012 | MS.gene046135:CDS | 45.0% |
| !! | TGATTGGGAGAAAGCACTTC+CGG | + | chr1.1:81687718-81687737 | MS.gene046135:CDS | 45.0% |
| !!! | AACGTTTTGAGGCACTTGGA+TGG | + | chr1.1:81687026-81687045 | MS.gene046135:CDS | 45.0% |
| !!! | GATCAACGTTTTGAGGCACT+TGG | + | chr1.1:81687022-81687041 | MS.gene046135:CDS | 45.0% |
| !!! | GATCGCTTTGTTTTGTCTGC+TGG | + | chr1.1:81685818-81685837 | MS.gene046135:CDS | 45.0% |
| AAGCTTGCCAGGTGCTCTAT+TGG | - | chr1.1:81688314-81688333 | None:intergenic | 50.0% | |
| ACTCTAGCTGTCACAGAAGC+AGG | - | chr1.1:81688695-81688714 | None:intergenic | 50.0% | |
| AGGCGGGATCAACATTTGGT+TGG | + | chr1.1:81688723-81688742 | MS.gene046135:CDS | 50.0% | |
| AGTGCTTTCTCCCAATCAGC+AGG | - | chr1.1:81687716-81687735 | None:intergenic | 50.0% | |
| AGTGTTCACGGAGCTGCATT+GGG | + | chr1.1:81687403-81687422 | MS.gene046135:CDS | 50.0% | |
| CAATGGGGAAGCAAAACTCC+TGG | + | chr1.1:81686454-81686473 | MS.gene046135:CDS | 50.0% | |
| CCCGAGAACTTCGAGACATA+TGG | + | chr1.1:81686481-81686500 | MS.gene046135:CDS | 50.0% | |
| CCGAGAAAGGGCAAGAATTG+AGG | - | chr1.1:81688429-81688448 | None:intergenic | 50.0% | |
| CTCTAGCTGTCACAGAAGCA+GGG | - | chr1.1:81688694-81688713 | None:intergenic | 50.0% | |
| CTTTCCAAGACCCCAATGTC+CGG | - | chr1.1:81686930-81686949 | None:intergenic | 50.0% | |
| GACAGCTAGAGTCAGCATTG+AGG | + | chr1.1:81688703-81688722 | MS.gene046135:CDS | 50.0% | |
| GCAATGGAGTTGGAGGTCAT+AGG | + | chr1.1:81686091-81686110 | MS.gene046135:intron | 50.0% | |
| GCAATGGGAGCAATCTGCAA+TGG | + | chr1.1:81688122-81688141 | MS.gene046135:CDS | 50.0% | |
| GGCACATGGAAAGGCTCATA+TGG | - | chr1.1:81687469-81687488 | None:intergenic | 50.0% | |
| GGTATTGCTCTTCATAGCCC+GGG | + | chr1.1:81688143-81688162 | MS.gene046135:CDS | 50.0% | |
| GTGTTCACTTGCCGGACATT+GGG | + | chr1.1:81686916-81686935 | MS.gene046135:CDS | 50.0% | |
| TATGGCGACTCCAATGCCTA+AGG | - | chr1.1:81687583-81687602 | None:intergenic | 50.0% | |
| TGGTTTCGATGCTGGTCACA+TGG | + | chr1.1:81687298-81687317 | MS.gene046135:intron | 50.0% | |
| TGTTCACTTGCCGGACATTG+GGG | + | chr1.1:81686917-81686936 | MS.gene046135:CDS | 50.0% | |
| TGTTTAGGTCCTCTGGGTCA+GGG | + | chr1.1:81686629-81686648 | MS.gene046135:intron | 50.0% | |
| TTGATGCTTCGTCCAGCTGA+TGG | + | chr1.1:81688353-81688372 | MS.gene046135:CDS | 50.0% | |
| TTGTTTAGGTCCTCTGGGTC+AGG | + | chr1.1:81686628-81686647 | MS.gene046135:intron | 50.0% | |
| ! | AGCTAGAGTCAGCATTGAGG+CGG | + | chr1.1:81688706-81688725 | MS.gene046135:CDS | 50.0% |
| ! | GGGTCTCTTCTGGTTAAGCA+CGG | - | chr1.1:81688408-81688427 | None:intergenic | 50.0% |
| ! | TCATCAGCCAATAGAGCACC+TGG | + | chr1.1:81688304-81688323 | MS.gene046135:CDS | 50.0% |
| !! | CAGGGTATTGCCAATGGTGT+TGG | + | chr1.1:81686647-81686666 | MS.gene046135:CDS | 50.0% |
| !!! | GCTCTTCTGGAGTAGCCTTT+TGG | - | chr1.1:81688073-81688092 | None:intergenic | 50.0% |
| ACCAGGAAGAACCTTGGCCA+GGG | - | chr1.1:81687985-81688004 | None:intergenic | 55.0% | |
| AGAGGAGGCTGCAGAGCTAA+AGG | + | chr1.1:81687670-81687689 | MS.gene046135:CDS | 55.0% | |
| CAGTGTTCACGGAGCTGCAT+TGG | + | chr1.1:81687402-81687421 | MS.gene046135:CDS | 55.0% | |
| CGTGTTCACTTGCCGGACAT+TGG | + | chr1.1:81686915-81686934 | MS.gene046135:CDS | 55.0% | |
| GCACTGCCACCAATAAGACC+AGG | - | chr1.1:81688002-81688021 | None:intergenic | 55.0% | |
| GGTGTCAGGGAACACGCAAT+GGG | + | chr1.1:81688107-81688126 | MS.gene046135:CDS | 55.0% | |
| GTAGCATCAGCAGGGGTTTC+CGG | - | chr1.1:81687933-81687952 | None:intergenic | 55.0% | |
| TCGAAGTTCTCGGGATGTCC+AGG | - | chr1.1:81686475-81686494 | None:intergenic | 55.0% | |
| TGCAGCTCCGTGAACACTGT+AGG | - | chr1.1:81687401-81687420 | None:intergenic | 55.0% | |
| TTGGAGCAAGTGCTCCAGCA+GGG | + | chr1.1:81688792-81688811 | MS.gene046135:CDS | 55.0% | |
| TTGGCAATACCCTGACCCAG+AGG | - | chr1.1:81686641-81686660 | None:intergenic | 55.0% | |
| ! | GCTAGAGTCAGCATTGAGGC+GGG | + | chr1.1:81688707-81688726 | MS.gene046135:CDS | 55.0% |
| ! | TGGTGTCAGGGAACACGCAA+TGG | + | chr1.1:81688106-81688125 | MS.gene046135:CDS | 55.0% |
| ! | TTTGGAGCAAGTGCTCCAGC+AGG | + | chr1.1:81688791-81688810 | MS.gene046135:CDS | 55.0% |
| !! | CTGGGTCAGGGTATTGCCAA+TGG | + | chr1.1:81686641-81686660 | MS.gene046135:CDS | 55.0% |
| CCGTGCAGCCAAGTGCTTCT+CGG | - | chr1.1:81686684-81686703 | None:intergenic | 60.0% | |
| CTGCCGCCGCTGATGATCTA+AGG | + | chr1.1:81688582-81688601 | MS.gene046135:CDS | 60.0% | |
| CTTCGAGTGCAGCACCCTCA+GGG | - | chr1.1:81687607-81687626 | None:intergenic | 60.0% | |
| CTTGCCGGACATTGGGGTCT+TGG | + | chr1.1:81686923-81686942 | MS.gene046135:CDS | 60.0% | |
| GACCAGGAAGAACCTTGGCC+AGG | - | chr1.1:81687986-81688005 | None:intergenic | 60.0% | |
| GCATTGCTCGGAAGCTTGCC+AGG | - | chr1.1:81688325-81688344 | None:intergenic | 60.0% | |
| GTGCTGCACTCGAAGCTGAG+TGG | + | chr1.1:81687612-81687631 | MS.gene046135:CDS | 60.0% | |
| TAGATCATCAGCGGCGGCAG+CGG | - | chr1.1:81688582-81688601 | None:intergenic | 60.0% | |
| TGGAGTCGCCATACCCCTGA+GGG | + | chr1.1:81687590-81687609 | MS.gene046135:CDS | 60.0% | |
| TTCGAGTGCAGCACCCTCAG+GGG | - | chr1.1:81687606-81687625 | None:intergenic | 60.0% | |
| TTGGAGTCGCCATACCCCTG+AGG | + | chr1.1:81687589-81687608 | MS.gene046135:CDS | 60.0% | |
| !! | CCGAGAAGCACTTGGCTGCA+CGG | + | chr1.1:81686681-81686700 | MS.gene046135:CDS | 60.0% |
| !! | GGCACTTGCCGAGAAGCACT+TGG | + | chr1.1:81686673-81686692 | MS.gene046135:CDS | 60.0% |
| GCCCTGGCCAAGGTTCTTCC+TGG | + | chr1.1:81687981-81688000 | MS.gene046135:CDS | 65.0% | |
| GCTTCGAGTGCAGCACCCTC+AGG | - | chr1.1:81687608-81687627 | None:intergenic | 65.0% | |
| GTGCAGCACCCTCAGGGGTA+TGG | - | chr1.1:81687601-81687620 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 81685737 | 81688880 | 81685737 | ID=MS.gene046135 |
| chr1.1 | mRNA | 81685737 | 81688880 | 81685737 | ID=MS.gene046135.t1;Parent=MS.gene046135 |
| chr1.1 | exon | 81685737 | 81685898 | 81685737 | ID=MS.gene046135.t1.exon1;Parent=MS.gene046135.t1 |
| chr1.1 | CDS | 81685737 | 81685898 | 81685737 | ID=cds.MS.gene046135.t1;Parent=MS.gene046135.t1 |
| chr1.1 | exon | 81686430 | 81686520 | 81686430 | ID=MS.gene046135.t1.exon2;Parent=MS.gene046135.t1 |
| chr1.1 | CDS | 81686430 | 81686520 | 81686430 | ID=cds.MS.gene046135.t1;Parent=MS.gene046135.t1 |
| chr1.1 | exon | 81686636 | 81686741 | 81686636 | ID=MS.gene046135.t1.exon3;Parent=MS.gene046135.t1 |
| chr1.1 | CDS | 81686636 | 81686741 | 81686636 | ID=cds.MS.gene046135.t1;Parent=MS.gene046135.t1 |
| chr1.1 | exon | 81686865 | 81687147 | 81686865 | ID=MS.gene046135.t1.exon4;Parent=MS.gene046135.t1 |
| chr1.1 | CDS | 81686865 | 81687147 | 81686865 | ID=cds.MS.gene046135.t1;Parent=MS.gene046135.t1 |
| chr1.1 | exon | 81687355 | 81687503 | 81687355 | ID=MS.gene046135.t1.exon5;Parent=MS.gene046135.t1 |
| chr1.1 | CDS | 81687355 | 81687503 | 81687355 | ID=cds.MS.gene046135.t1;Parent=MS.gene046135.t1 |
| chr1.1 | exon | 81687586 | 81687739 | 81687586 | ID=MS.gene046135.t1.exon6;Parent=MS.gene046135.t1 |
| chr1.1 | CDS | 81687586 | 81687739 | 81687586 | ID=cds.MS.gene046135.t1;Parent=MS.gene046135.t1 |
| chr1.1 | exon | 81687921 | 81688880 | 81687921 | ID=MS.gene046135.t1.exon7;Parent=MS.gene046135.t1 |
| chr1.1 | CDS | 81687921 | 81688880 | 81687921 | ID=cds.MS.gene046135.t1;Parent=MS.gene046135.t1 |
| Gene Sequence |
| Protein sequence |
