Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene047035.t1 | XP_003631133.1 | 95.9 | 365 | 14 | 1 | 1 | 365 | 1 | 364 | 4.10E-173 | 617.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene047035.t1 | Q8VWG7 | 64.1 | 379 | 120 | 2 | 1 | 364 | 2 | 379 | 3.7e-114 | 412.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene047035.t1 | G7LE77 | 95.9 | 365 | 14 | 1 | 1 | 365 | 1 | 364 | 2.9e-173 | 617.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene047035 | MS.gene073336 | PPI |
| MS.gene047035 | MS.gene012318 | PPI |
| MS.gene047035 | MS.gene96326 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene047035.t1 | MTR_8g107460 | 96.438 | 365 | 12 | 1 | 1 | 365 | 1 | 364 | 0.0 | 721 |
| MS.gene047035.t1 | MTR_8g107460 | 97.255 | 255 | 6 | 1 | 1 | 255 | 1 | 254 | 1.63e-180 | 501 |
| MS.gene047035.t1 | MTR_4g102390 | 57.377 | 244 | 82 | 2 | 1 | 224 | 1 | 242 | 5.40e-88 | 271 |
| MS.gene047035.t1 | MTR_1g023140 | 48.649 | 111 | 57 | 0 | 251 | 361 | 2 | 112 | 7.59e-36 | 127 |
| MS.gene047035.t1 | MTR_3g112410 | 46.429 | 112 | 60 | 0 | 251 | 362 | 2 | 113 | 6.72e-31 | 114 |
| MS.gene047035.t1 | MTR_5g021180 | 45.536 | 112 | 61 | 0 | 253 | 364 | 6 | 117 | 1.45e-30 | 113 |
| MS.gene047035.t1 | MTR_7g073680 | 38.843 | 121 | 74 | 0 | 245 | 365 | 14 | 134 | 3.21e-28 | 107 |
| MS.gene047035.t1 | MTR_8g005320 | 37.705 | 122 | 74 | 1 | 240 | 359 | 9 | 130 | 2.81e-26 | 102 |
| MS.gene047035.t1 | MTR_7g009070 | 41.176 | 102 | 60 | 0 | 260 | 361 | 31 | 132 | 7.72e-26 | 101 |
| MS.gene047035.t1 | MTR_8g006685 | 37.705 | 122 | 74 | 1 | 240 | 359 | 78 | 199 | 1.03e-25 | 103 |
| MS.gene047035.t1 | MTR_8g006560 | 37.705 | 122 | 74 | 1 | 240 | 359 | 78 | 199 | 1.03e-25 | 103 |
| MS.gene047035.t1 | MTR_4g094690 | 46.316 | 95 | 49 | 2 | 258 | 350 | 62 | 156 | 2.66e-22 | 92.8 |
| MS.gene047035.t1 | MTR_2g078020 | 30.279 | 251 | 141 | 5 | 113 | 362 | 478 | 695 | 1.55e-21 | 96.7 |
| MS.gene047035.t1 | MTR_5g037950 | 43.137 | 102 | 58 | 0 | 257 | 358 | 21 | 122 | 1.07e-20 | 87.0 |
| MS.gene047035.t1 | MTR_5g037930 | 39.623 | 106 | 64 | 0 | 256 | 361 | 21 | 126 | 6.46e-20 | 85.1 |
| MS.gene047035.t1 | MTR_2g082590 | 34.579 | 107 | 70 | 0 | 252 | 358 | 7 | 113 | 1.68e-19 | 83.6 |
| MS.gene047035.t1 | MTR_5g037890 | 41.346 | 104 | 61 | 0 | 255 | 358 | 18 | 121 | 3.42e-17 | 77.4 |
| MS.gene047035.t1 | MTR_2g082590 | 30.833 | 120 | 70 | 1 | 252 | 358 | 7 | 126 | 2.36e-16 | 75.5 |
| MS.gene047035.t1 | MTR_4g081380 | 31.132 | 106 | 73 | 0 | 253 | 358 | 8 | 113 | 3.87e-16 | 74.7 |
| MS.gene047035.t1 | MTR_2g010750 | 32.692 | 104 | 70 | 0 | 255 | 358 | 9 | 112 | 4.81e-16 | 74.3 |
| MS.gene047035.t1 | MTR_4g088905 | 34.234 | 111 | 69 | 1 | 255 | 365 | 3 | 109 | 1.67e-14 | 75.1 |
| MS.gene047035.t1 | MTR_2g079420 | 36.170 | 141 | 72 | 7 | 223 | 358 | 42 | 169 | 6.76e-14 | 69.7 |
| MS.gene047035.t1 | MTR_3g089065 | 38.750 | 80 | 47 | 2 | 284 | 361 | 93 | 172 | 1.98e-13 | 68.2 |
| MS.gene047035.t1 | MTR_8g059015 | 40.260 | 77 | 44 | 2 | 284 | 358 | 96 | 172 | 1.47e-11 | 62.8 |
| MS.gene047035.t1 | MTR_7g102130 | 30.120 | 83 | 56 | 1 | 280 | 362 | 48 | 128 | 4.22e-11 | 60.5 |
| MS.gene047035.t1 | MTR_3g452710 | 33.333 | 105 | 68 | 1 | 92 | 194 | 4 | 108 | 4.36e-11 | 64.3 |
| MS.gene047035.t1 | MTR_1g114290 | 35.294 | 85 | 53 | 2 | 259 | 342 | 69 | 152 | 6.86e-11 | 61.2 |
| MS.gene047035.t1 | MTR_3g452710 | 33.333 | 105 | 68 | 1 | 92 | 194 | 4 | 108 | 7.57e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene047035.t1 | AT3G17880 | 62.005 | 379 | 128 | 2 | 1 | 364 | 2 | 379 | 4.50e-172 | 484 |
| MS.gene047035.t1 | AT3G17880 | 63.441 | 372 | 127 | 3 | 1 | 364 | 2 | 372 | 8.33e-170 | 478 |
| MS.gene047035.t1 | AT4G22670 | 56.870 | 262 | 83 | 3 | 1 | 234 | 1 | 260 | 2.39e-97 | 296 |
| MS.gene047035.t1 | AT3G51030 | 47.748 | 111 | 58 | 0 | 251 | 361 | 2 | 112 | 2.79e-32 | 117 |
| MS.gene047035.t1 | AT1G45145 | 41.818 | 110 | 64 | 0 | 254 | 363 | 4 | 113 | 4.48e-28 | 106 |
| MS.gene047035.t1 | AT1G19730 | 42.982 | 114 | 64 | 1 | 251 | 363 | 2 | 115 | 1.39e-27 | 105 |
| MS.gene047035.t1 | AT3G08710 | 40.000 | 105 | 63 | 0 | 255 | 359 | 23 | 127 | 2.54e-26 | 102 |
| MS.gene047035.t1 | AT3G08710 | 40.000 | 105 | 63 | 0 | 255 | 359 | 23 | 127 | 2.54e-26 | 102 |
| MS.gene047035.t1 | AT3G08710 | 40.000 | 105 | 63 | 0 | 255 | 359 | 23 | 127 | 2.54e-26 | 102 |
| MS.gene047035.t1 | AT5G42980 | 44.444 | 108 | 60 | 0 | 254 | 361 | 4 | 111 | 2.63e-26 | 102 |
| MS.gene047035.t1 | AT5G39950 | 40.000 | 105 | 63 | 0 | 256 | 360 | 26 | 130 | 1.19e-24 | 98.2 |
| MS.gene047035.t1 | AT1G59730 | 40.741 | 108 | 64 | 0 | 254 | 361 | 20 | 127 | 1.27e-23 | 95.1 |
| MS.gene047035.t1 | AT1G69880 | 37.615 | 109 | 68 | 0 | 257 | 365 | 39 | 147 | 5.73e-23 | 94.0 |
| MS.gene047035.t1 | AT3G56420 | 34.259 | 108 | 71 | 0 | 255 | 362 | 40 | 147 | 1.34e-21 | 90.5 |
| MS.gene047035.t1 | AT3G56420 | 34.259 | 108 | 71 | 0 | 255 | 362 | 40 | 147 | 1.34e-21 | 90.5 |
| MS.gene047035.t1 | AT3G56420 | 34.259 | 108 | 71 | 0 | 255 | 362 | 40 | 147 | 1.34e-21 | 90.5 |
| MS.gene047035.t1 | AT2G40790 | 34.862 | 109 | 68 | 1 | 260 | 365 | 42 | 150 | 2.52e-19 | 84.3 |
| MS.gene047035.t1 | AT2G40790 | 34.862 | 109 | 68 | 1 | 260 | 365 | 42 | 150 | 2.52e-19 | 84.3 |
| MS.gene047035.t1 | AT2G35010 | 40.179 | 112 | 65 | 1 | 251 | 360 | 80 | 191 | 3.57e-19 | 85.1 |
| MS.gene047035.t1 | AT2G35010 | 40.179 | 112 | 65 | 1 | 251 | 360 | 80 | 191 | 3.57e-19 | 85.1 |
| MS.gene047035.t1 | AT1G53300 | 24.151 | 265 | 167 | 4 | 100 | 363 | 468 | 699 | 7.82e-18 | 85.5 |
| MS.gene047035.t1 | AT1G31020 | 43.689 | 103 | 56 | 1 | 260 | 360 | 54 | 156 | 2.36e-17 | 79.0 |
| MS.gene047035.t1 | AT3G58620 | 24.427 | 262 | 163 | 4 | 100 | 360 | 452 | 679 | 9.49e-16 | 79.3 |
| MS.gene047035.t1 | AT1G11530 | 32.692 | 104 | 70 | 0 | 255 | 358 | 2 | 105 | 2.26e-15 | 72.4 |
| MS.gene047035.t1 | AT2G42580 | 23.846 | 260 | 163 | 4 | 100 | 358 | 461 | 686 | 6.80e-14 | 73.6 |
| MS.gene047035.t1 | AT4G32580 | 34.118 | 85 | 56 | 0 | 281 | 365 | 25 | 109 | 1.11e-13 | 68.6 |
| MS.gene047035.t1 | AT3G15360 | 41.558 | 77 | 43 | 2 | 284 | 358 | 111 | 187 | 9.70e-13 | 66.6 |
| MS.gene047035.t1 | AT4G04950 | 34.524 | 84 | 55 | 0 | 281 | 364 | 25 | 108 | 1.05e-12 | 69.7 |
| MS.gene047035.t1 | AT1G03680 | 38.961 | 77 | 45 | 2 | 284 | 358 | 99 | 175 | 2.83e-11 | 62.4 |
| MS.gene047035.t1 | AT1G04190 | 29.412 | 153 | 92 | 4 | 82 | 234 | 1 | 137 | 3.53e-11 | 64.3 |
| MS.gene047035.t1 | AT3G02730 | 40.000 | 90 | 51 | 2 | 278 | 364 | 88 | 177 | 5.41e-11 | 61.6 |
Find 66 sgRNAs with CRISPR-Local
Find 237 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCAGGTTCCGTCTTGGGTT+GGG | 0.281608 | 4.1:-132677 | None:intergenic |
| GATTGCTATGGCACTTAAAA+AGG | 0.281728 | 4.1:+133227 | MS.gene047035:CDS |
| ATCAAACCCTAAATGGATAT+TGG | 0.306190 | 4.1:+132464 | None:intergenic |
| TTGTATCCTTTGGCTGAGTC+TGG | 0.328325 | 4.1:-133114 | None:intergenic |
| TGATTCTGACACTGCCTTGA+AGG | 0.370019 | 4.1:+133002 | MS.gene047035:CDS |
| AGCTCTGGTGGCATAGAGTA+TGG | 0.382849 | 4.1:-132938 | None:intergenic |
| TCTTCAAATCTTATCTTCTC+AGG | 0.387415 | 4.1:+132564 | MS.gene047035:CDS |
| TCAACATCAGGTTCCGTCTT+GGG | 0.391246 | 4.1:-132682 | None:intergenic |
| GATAAGATTTGAAGAATTGA+AGG | 0.406427 | 4.1:-132556 | None:intergenic |
| TGAATGTGGATTCAACAAAA+TGG | 0.408169 | 4.1:-132914 | None:intergenic |
| AACCACTCTCTGATACTTCT+CGG | 0.409422 | 4.1:-135812 | None:intergenic |
| TCAGGTTCCGTCTTGGGTTG+GGG | 0.411282 | 4.1:-132676 | None:intergenic |
| GAATCACGGATAGCGGCATT+TGG | 0.421359 | 4.1:-132985 | None:intergenic |
| TATTCACTCTGTTAGTGAAC+TGG | 0.425636 | 4.1:+135681 | MS.gene047035:CDS |
| ATAGTTGTGCAGCATCCCTT+TGG | 0.428829 | 4.1:-132822 | None:intergenic |
| CAATGACCCTCCTCAAAAGA+TGG | 0.446444 | 4.1:+132771 | MS.gene047035:CDS |
| AGGATTATCAAGGGCTATGT+TGG | 0.453178 | 4.1:+133143 | MS.gene047035:CDS |
| CATTTAAAAGGGCAAGTGAT+TGG | 0.455412 | 4.1:+135658 | MS.gene047035:intron |
| CGCTTGATCGAAATTACCTT+GGG | 0.461488 | 4.1:-132872 | None:intergenic |
| CAAGGGCTATGTTGGGACTC+TGG | 0.461519 | 4.1:+133151 | MS.gene047035:CDS |
| GCATTGTCTGCTTTAAAAGA+TGG | 0.463326 | 4.1:+134377 | MS.gene047035:CDS |
| CATCAGGTTCCGTCTTGGGT+TGG | 0.464495 | 4.1:-132678 | None:intergenic |
| GTTCCGTCTTGGGTTGGGGA+GGG | 0.464783 | 4.1:-132672 | None:intergenic |
| TTCACCACTTTATACAAGCT+TGG | 0.467131 | 4.1:+135789 | MS.gene047035:CDS |
| ACAAAATACGAGGATTATCA+AGG | 0.476963 | 4.1:+133133 | MS.gene047035:CDS |
| ATGGAAGAAACGAACCTTCA+AGG | 0.479982 | 4.1:-133016 | None:intergenic |
| ATCAACATCAGGTTCCGTCT+TGG | 0.506363 | 4.1:-132683 | None:intergenic |
| GGTTCCGTCTTGGGTTGGGG+AGG | 0.509145 | 4.1:-132673 | None:intergenic |
| TCATCATTATCATCAACATC+AGG | 0.516507 | 4.1:-132694 | None:intergenic |
| GGTAATAACTTAAAGAGAGC+CGG | 0.517504 | 4.1:-135989 | None:intergenic |
| TCTTCAGTTACTTGAGCAGA+AGG | 0.520676 | 4.1:-132799 | None:intergenic |
| TGAACGCTTACGAAAGCAAA+AGG | 0.522287 | 4.1:+133371 | MS.gene047035:CDS |
| GGATTATCAAGGGCTATGTT+GGG | 0.522634 | 4.1:+133144 | MS.gene047035:CDS |
| GCGCTTGATCGAAATTACCT+TGG | 0.522653 | 4.1:-132873 | None:intergenic |
| TACTTTACTGCAACATGGTG+TGG | 0.523444 | 4.1:+135751 | MS.gene047035:CDS |
| GAAGGAGTATGAAGAAGAGA+AGG | 0.524677 | 4.1:-132533 | None:intergenic |
| AGAGATTGACAGTGTGGTGG+GGG | 0.533886 | 4.1:+135927 | MS.gene047035:CDS |
| ATAAGATTTGAAGAATTGAA+GGG | 0.542023 | 4.1:-132555 | None:intergenic |
| TCAAGTAACTGAAGACCAAA+GGG | 0.543458 | 4.1:+132807 | MS.gene047035:CDS |
| AGGAAGATTGCTCAACATGC+CGG | 0.551486 | 4.1:+135970 | MS.gene047035:CDS |
| AAAGAGATTGACAGTGTGGT+GGG | 0.555285 | 4.1:+135925 | MS.gene047035:CDS |
| CCCATAAAATTGAGGAGCAT+AGG | 0.561420 | 4.1:+133340 | MS.gene047035:CDS |
| AGTTGATATAGATGAGGCAG+TGG | 0.566064 | 4.1:+135843 | MS.gene047035:CDS |
| GCCAAATGCCCATAAAATTG+AGG | 0.568287 | 4.1:+133332 | MS.gene047035:CDS |
| CAGTGGATGTCGCAGCACGC+TGG | 0.569047 | 4.1:+135860 | MS.gene047035:CDS |
| CTCAAGTAACTGAAGACCAA+AGG | 0.574078 | 4.1:+132806 | MS.gene047035:CDS |
| TCGGCCAAGCTTGTATAAAG+TGG | 0.578240 | 4.1:-135793 | None:intergenic |
| GATTTGAAGAATTGAAGGGA+AGG | 0.584202 | 4.1:-132551 | None:intergenic |
| CATCCCTCCCCAACCCAAGA+CGG | 0.588671 | 4.1:+132669 | MS.gene047035:CDS |
| GCAATTGATGCTATATCCCA+AGG | 0.590067 | 4.1:+132856 | MS.gene047035:CDS |
| AATGACCCTCCTCAAAAGAT+GGG | 0.593153 | 4.1:+132772 | MS.gene047035:CDS |
| GCATAGAGTATGGATGAATG+TGG | 0.594896 | 4.1:-132928 | None:intergenic |
| TTTAAAAGTTGATATAGATG+AGG | 0.601088 | 4.1:+135837 | MS.gene047035:CDS |
| CAAAGAGATTGACAGTGTGG+TGG | 0.605311 | 4.1:+135924 | MS.gene047035:CDS |
| TCAAGGCAGTGTCAGAATCA+CGG | 0.606228 | 4.1:-132999 | None:intergenic |
| TTATGATGAAGAGATTGCTA+TGG | 0.616304 | 4.1:+133215 | MS.gene047035:CDS |
| TTCTGTACTTTACTGCAACA+TGG | 0.622354 | 4.1:+135746 | MS.gene047035:CDS |
| ATCAATCCAGACTCAGCCAA+AGG | 0.627906 | 4.1:+133108 | MS.gene047035:CDS |
| GTGGTGAAATGTAACGACAA+GGG | 0.632549 | 4.1:-135774 | None:intergenic |
| AAGAGATTGACAGTGTGGTG+GGG | 0.633527 | 4.1:+135926 | MS.gene047035:CDS |
| GGCCGAGAAGTATCAGAGAG+TGG | 0.634912 | 4.1:+135810 | MS.gene047035:CDS |
| CAAAATACGAGGATTATCAA+GGG | 0.635607 | 4.1:+133134 | MS.gene047035:CDS |
| AGTGTCAGAATCACGGATAG+CGG | 0.639101 | 4.1:-132992 | None:intergenic |
| AGTGGTGAAATGTAACGACA+AGG | 0.675536 | 4.1:-135775 | None:intergenic |
| GCCAAAGGATACAAAATACG+AGG | 0.683690 | 4.1:+133123 | MS.gene047035:CDS |
| TGGCAAAGAGATTGACAGTG+TGG | 0.743695 | 4.1:+135921 | MS.gene047035:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CTTAACAAAATTAATAAATA+AGG | + | chr4.1:135035-135054 | MS.gene047035:intron | 10.0% |
| !!! | TTTAAAAATTATAGTTTTCA+AGG | + | chr4.1:133553-133572 | MS.gene047035:intron | 10.0% |
| !!! | ACATTTTTCTTTGTAAAAAA+TGG | + | chr4.1:135901-135920 | MS.gene047035:CDS | 15.0% |
| !!! | ATTTTTAAAAACAAACTGAA+AGG | - | chr4.1:133542-133561 | None:intergenic | 15.0% |
| !!! | TTTTTAAAAACAAACTGAAA+GGG | - | chr4.1:133541-133560 | None:intergenic | 15.0% |
| !!! | TTTTTTACAAAGAAAAATGT+TGG | - | chr4.1:135901-135920 | None:intergenic | 15.0% |
| !! | AAATAAGTGTACAAAAAAAC+AGG | + | chr4.1:134893-134912 | MS.gene047035:intron | 20.0% |
| !! | ACAAAAAACTTAGTAGATTA+AGG | - | chr4.1:135510-135529 | None:intergenic | 20.0% |
| !! | ACAAAACAAGAGATTTAAAT+GGG | - | chr4.1:132633-132652 | None:intergenic | 20.0% |
| !! | ACATGAACTTATAGTTAATT+TGG | - | chr4.1:135333-135352 | None:intergenic | 20.0% |
| !! | ATAAGATTTGAAGAATTGAA+GGG | - | chr4.1:132558-132577 | None:intergenic | 20.0% |
| !! | CAAAAAACTTAGTAGATTAA+GGG | - | chr4.1:135509-135528 | None:intergenic | 20.0% |
| !! | TTTGCATAAATTTAGTGATA+GGG | + | chr4.1:135282-135301 | MS.gene047035:intron | 20.0% |
| !!! | AAACTATTAGAATTTGAGAT+TGG | - | chr4.1:133953-133972 | None:intergenic | 20.0% |
| !!! | AACTATTAGAATTTGAGATT+GGG | - | chr4.1:133952-133971 | None:intergenic | 20.0% |
| !!! | GCAGTTCATATAAAATTTTT+AGG | - | chr4.1:134608-134627 | None:intergenic | 20.0% |
| !!! | TCTACTAAGTTTTTTGTTTT+TGG | + | chr4.1:135513-135532 | MS.gene047035:intron | 20.0% |
| !!! | TTTAAAAGTTGATATAGATG+AGG | + | chr4.1:135837-135856 | MS.gene047035:CDS | 20.0% |
| !!! | TTTTGCATAAATTTAGTGAT+AGG | + | chr4.1:135281-135300 | MS.gene047035:intron | 20.0% |
| !!! | TTTTTTAGATGGAATTTGTT+AGG | + | chr4.1:134949-134968 | MS.gene047035:intron | 20.0% |
| ! | AATTAAGTGACTTATTGCAT+TGG | + | chr4.1:135632-135651 | MS.gene047035:intron | 25.0% |
| ! | AGAAAAAAATTGTGTTTGTG+TGG | - | chr4.1:133062-133081 | None:intergenic | 25.0% |
| ! | AGAATGAATTGTAGGAAATT+AGG | - | chr4.1:134234-134253 | None:intergenic | 25.0% |
| ! | AGTTGATCTATTTAGTTAAG+AGG | + | chr4.1:135539-135558 | MS.gene047035:intron | 25.0% |
| ! | CACAAAACAAGAGATTTAAA+TGG | - | chr4.1:132634-132653 | None:intergenic | 25.0% |
| ! | GAAAGGTCTGATAAAATTTA+GGG | + | chr4.1:135156-135175 | MS.gene047035:intron | 25.0% |
| ! | GATAAGATTTGAAGAATTGA+AGG | - | chr4.1:132559-132578 | None:intergenic | 25.0% |
| ! | TGAAAGGTCTGATAAAATTT+AGG | + | chr4.1:135155-135174 | MS.gene047035:intron | 25.0% |
| ! | TTAAGGGAAGAAAAATAATC+AGG | - | chr4.1:135493-135512 | None:intergenic | 25.0% |
| !! | ACAAATCAACATATTTTGCT+GGG | + | chr4.1:134035-134054 | MS.gene047035:intron | 25.0% |
| !! | CTATTGGTAATAAATTGTCA+TGG | + | chr4.1:135124-135143 | MS.gene047035:intron | 25.0% |
| !! | TGTGTGAAATGGAATTTTAA+AGG | + | chr4.1:134091-134110 | MS.gene047035:intron | 25.0% |
| !!! | AAAACAGCACTATTTTAGTT+TGG | - | chr4.1:133470-133489 | None:intergenic | 25.0% |
| !!! | ACTATGAGAAAGTTTTTTCA+AGG | - | chr4.1:133980-133999 | None:intergenic | 25.0% |
| !!! | ATATTTTTGTTGCCATTACT+TGG | + | chr4.1:135578-135597 | MS.gene047035:intron | 25.0% |
| !!! | ATCATCGTATTTTGTTTGTA+GGG | + | chr4.1:134665-134684 | MS.gene047035:intron | 25.0% |
| !!! | TAGACAGTATTTAACTTTTG+AGG | - | chr4.1:135438-135457 | None:intergenic | 25.0% |
| !!! | TATAAAATTTTTAGGCTGTG+AGG | - | chr4.1:134600-134619 | None:intergenic | 25.0% |
| !!! | TATCATCGTATTTTGTTTGT+AGG | + | chr4.1:134664-134683 | MS.gene047035:intron | 25.0% |
| !!! | TGTTTTTGAAGTGCATATAT+AGG | - | chr4.1:134297-134316 | None:intergenic | 25.0% |
| AAAATAATCAGGTGGCAAAA+AGG | - | chr4.1:135482-135501 | None:intergenic | 30.0% | |
| AAAATTGTGTTTGTGTGGAA+TGG | - | chr4.1:133057-133076 | None:intergenic | 30.0% | |
| AAATTTAGTGATAGGGTGTA+GGG | + | chr4.1:135289-135308 | MS.gene047035:intron | 30.0% | |
| AAGACAGATAGATCATAGAT+GGG | - | chr4.1:133589-133608 | None:intergenic | 30.0% | |
| ACAAAATACGAGGATTATCA+AGG | + | chr4.1:133133-133152 | MS.gene047035:CDS | 30.0% | |
| ATCAAATATCTGGACTTAGT+AGG | + | chr4.1:133611-133630 | MS.gene047035:intron | 30.0% | |
| ATGCTGAAAAATTACTCTCA+AGG | - | chr4.1:135389-135408 | None:intergenic | 30.0% | |
| ATTGATCTGGAAGAAAGAAA+TGG | - | chr4.1:133094-133113 | None:intergenic | 30.0% | |
| CAAAATACGAGGATTATCAA+GGG | + | chr4.1:133134-133153 | MS.gene047035:CDS | 30.0% | |
| CAGACAAAAATACACTTGAA+AGG | + | chr4.1:135950-135969 | MS.gene047035:CDS | 30.0% | |
| CTATCTCAACCTTATAAAAC+CGG | - | chr4.1:133928-133947 | None:intergenic | 30.0% | |
| CTGATAACTTCAGCTTATTT+GGG | + | chr4.1:134117-134136 | MS.gene047035:intron | 30.0% | |
| CTTAATAAAAACACTAGCTC+TGG | - | chr4.1:132956-132975 | None:intergenic | 30.0% | |
| GTTGGGTAACAATAGATTTA+GGG | + | chr4.1:134008-134027 | MS.gene047035:intron | 30.0% | |
| TAAATTTAGTGATAGGGTGT+AGG | + | chr4.1:135288-135307 | MS.gene047035:intron | 30.0% | |
| TAGATGTTGAACTAAATGCA+TGG | - | chr4.1:135107-135126 | None:intergenic | 30.0% | |
| TCATCATTATCATCAACATC+AGG | - | chr4.1:132697-132716 | None:intergenic | 30.0% | |
| TCTTCAAATCTTATCTTCTC+AGG | + | chr4.1:132564-132583 | MS.gene047035:CDS | 30.0% | |
| TGAATGTGGATTCAACAAAA+TGG | - | chr4.1:132917-132936 | None:intergenic | 30.0% | |
| TGACTAGAAGAATGAATTGT+AGG | - | chr4.1:134242-134261 | None:intergenic | 30.0% | |
| TGCTGAAAAATTACTCTCAA+GGG | - | chr4.1:135388-135407 | None:intergenic | 30.0% | |
| TGTTGGGTAACAATAGATTT+AGG | + | chr4.1:134007-134026 | MS.gene047035:intron | 30.0% | |
| TTATGATGAAGAGATTGCTA+TGG | + | chr4.1:133215-133234 | MS.gene047035:CDS | 30.0% | |
| TTGGCAATTTCAATTCCATA+AGG | - | chr4.1:134425-134444 | None:intergenic | 30.0% | |
| TTGGGTAACAATAGATTTAG+GGG | + | chr4.1:134009-134028 | MS.gene047035:intron | 30.0% | |
| ! | ATAGGATCAGAGGTATAATA+TGG | - | chr4.1:134500-134519 | None:intergenic | 30.0% |
| ! | GACAAATCAACATATTTTGC+TGG | + | chr4.1:134034-134053 | MS.gene047035:intron | 30.0% |
| ! | GCATTTAGTTCAACATCTAT+TGG | + | chr4.1:135108-135127 | MS.gene047035:intron | 30.0% |
| !! | TCAAGTTGAATACCAAGTAA+TGG | - | chr4.1:135593-135612 | None:intergenic | 30.0% |
| !! | TCATCGTATTTTGTTTGTAG+GGG | + | chr4.1:134666-134685 | MS.gene047035:intron | 30.0% |
| !! | TCTCATAGTTAGTCTTTGTT+GGG | + | chr4.1:133991-134010 | MS.gene047035:intron | 30.0% |
| !! | TTCTCATAGTTAGTCTTTGT+TGG | + | chr4.1:133990-134009 | MS.gene047035:intron | 30.0% |
| !!! | ATCTCTTGTTTTGTGTAGTT+TGG | + | chr4.1:132639-132658 | MS.gene047035:intron | 30.0% |
| !!! | TCTCTTGTTTTGTGTAGTTT+GGG | + | chr4.1:132640-132659 | MS.gene047035:intron | 30.0% |
| AAAAAAACAGGCAAGAGGAT+AGG | + | chr4.1:134905-134924 | MS.gene047035:intron | 35.0% | |
| AAATAGATGTGTCCTGAACA+CGG | + | chr4.1:133869-133888 | MS.gene047035:intron | 35.0% | |
| AACCTAATACAGCAAATGAG+CGG | + | chr4.1:134985-135004 | MS.gene047035:intron | 35.0% | |
| AAGAAAACTAGAACATGGCA+AGG | - | chr4.1:134146-134165 | None:intergenic | 35.0% | |
| AAGGGATTGACATACGAATA+AGG | + | chr4.1:134818-134837 | MS.gene047035:intron | 35.0% | |
| ACTACTTGAAATCCCTGTTT+AGG | + | chr4.1:134633-134652 | MS.gene047035:intron | 35.0% | |
| ACTGCAAGAAAACTAGAACA+TGG | - | chr4.1:134151-134170 | None:intergenic | 35.0% | |
| AGCAATTCAACGACAAGATT+TGG | - | chr4.1:134444-134463 | None:intergenic | 35.0% | |
| AGGGAAGAAAAATAATCAGG+TGG | - | chr4.1:135490-135509 | None:intergenic | 35.0% | |
| ATGACCAGTGTTAGATATTC+TGG | + | chr4.1:134717-134736 | MS.gene047035:intron | 35.0% | |
| ATGGAACAAGTTAGGAGAAA+TGG | - | chr4.1:133038-133057 | None:intergenic | 35.0% | |
| CAAACCAGAATATCTAACAC+TGG | - | chr4.1:134724-134743 | None:intergenic | 35.0% | |
| CAAATGAGCGGGAAAATATT+AGG | + | chr4.1:134997-135016 | MS.gene047035:intron | 35.0% | |
| CAACAGGATAGGAATGAAAT+TGG | + | chr4.1:134848-134867 | MS.gene047035:intron | 35.0% | |
| CAAGACAGATAGATCATAGA+TGG | - | chr4.1:133590-133609 | None:intergenic | 35.0% | |
| CAAGAGGATAGGAATGAAAT+TGG | + | chr4.1:134916-134935 | MS.gene047035:intron | 35.0% | |
| CAATTTCATTCCTATCCTGT+TGG | - | chr4.1:134850-134869 | None:intergenic | 35.0% | |
| CATCTATGATCTATCTGTCT+TGG | + | chr4.1:133588-133607 | MS.gene047035:intron | 35.0% | |
| CATTTAAAAGGGCAAGTGAT+TGG | + | chr4.1:135658-135677 | MS.gene047035:intron | 35.0% | |
| GAGTCTATCCAAGTTCTATT+TGG | + | chr4.1:133780-133799 | MS.gene047035:intron | 35.0% | |
| GATAAACACAGACCTAAACA+GGG | - | chr4.1:134648-134667 | None:intergenic | 35.0% | |
| GATTGCTATGGCACTTAAAA+AGG | + | chr4.1:133227-133246 | MS.gene047035:CDS | 35.0% | |
| GATTTGAAGAATTGAAGGGA+AGG | - | chr4.1:132554-132573 | None:intergenic | 35.0% | |
| GCTGATAACTTCAGCTTATT+TGG | + | chr4.1:134116-134135 | MS.gene047035:intron | 35.0% | |
| TAAGTGACTTATTGCATTGG+TGG | + | chr4.1:135635-135654 | MS.gene047035:intron | 35.0% | |
| TAATCTCGTCTGAAGAAAGT+AGG | - | chr4.1:133260-133279 | None:intergenic | 35.0% | |
| TATAGTATGCGCATCAGTTA+TGG | - | chr4.1:133501-133520 | None:intergenic | 35.0% | |
| TATTCACTCTGTTAGTGAAC+TGG | + | chr4.1:135681-135700 | MS.gene047035:CDS | 35.0% | |
| TCAAGTAACTGAAGACCAAA+GGG | + | chr4.1:132807-132826 | MS.gene047035:CDS | 35.0% | |
| TCTGTCTTGGATCAAATATC+TGG | + | chr4.1:133601-133620 | MS.gene047035:intron | 35.0% | |
| TCTTCTAGTCATCAAAGTTC+CGG | + | chr4.1:134251-134270 | MS.gene047035:intron | 35.0% | |
| TGATAAACACAGACCTAAAC+AGG | - | chr4.1:134649-134668 | None:intergenic | 35.0% | |
| TGCATCTTTATCCTGCAAAA+AGG | - | chr4.1:134360-134379 | None:intergenic | 35.0% | |
| TGTACAAAAAAACAGGCAAG+AGG | + | chr4.1:134900-134919 | MS.gene047035:intron | 35.0% | |
| TGTCGTTGAATTGCTTATTC+TGG | + | chr4.1:134449-134468 | MS.gene047035:intron | 35.0% | |
| TTCACCACTTTATACAAGCT+TGG | + | chr4.1:135789-135808 | MS.gene047035:CDS | 35.0% | |
| TTCTGTACTTTACTGCAACA+TGG | + | chr4.1:135746-135765 | MS.gene047035:CDS | 35.0% | |
| TTTCAATTCCATAAGGCAGA+AGG | - | chr4.1:134418-134437 | None:intergenic | 35.0% | |
| ! | AATCAACATATTTTGCTGGG+CGG | + | chr4.1:134038-134057 | MS.gene047035:intron | 35.0% |
| ! | CAGTGTTAGATATTCTGGTT+TGG | + | chr4.1:134722-134741 | MS.gene047035:intron | 35.0% |
| ! | CCTATGCTCCTCAATTTTAT+GGG | - | chr4.1:133343-133362 | None:intergenic | 35.0% |
| ! | CTTACTTGAGCTTCATTTTG+TGG | - | chr4.1:133426-133445 | None:intergenic | 35.0% |
| ! | TCATTTTGTGGTTGCTTCTT+CGG | - | chr4.1:133414-133433 | None:intergenic | 35.0% |
| ! | TCCTATGCTCCTCAATTTTA+TGG | - | chr4.1:133344-133363 | None:intergenic | 35.0% |
| ! | TCCTCAATTTTATGGGCATT+TGG | - | chr4.1:133336-133355 | None:intergenic | 35.0% |
| ! | TCCTCGTATTTTGTATCCTT+TGG | - | chr4.1:133127-133146 | None:intergenic | 35.0% |
| ! | TGCATTGGTGGCATTTAAAA+GGG | + | chr4.1:135647-135666 | MS.gene047035:intron | 35.0% |
| ! | TTGCATTGGTGGCATTTAAA+AGG | + | chr4.1:135646-135665 | MS.gene047035:intron | 35.0% |
| ! | TTGTGGCAATGCTTACATTT+TGG | + | chr4.1:135198-135217 | MS.gene047035:intron | 35.0% |
| !! | AATAAAAACACTAGCTCTGG+TGG | - | chr4.1:132953-132972 | None:intergenic | 35.0% |
| !! | AGTTTGTTGCTTGTGTGAAA+TGG | + | chr4.1:134080-134099 | MS.gene047035:intron | 35.0% |
| !! | GCATTGTCTGCTTTAAAAGA+TGG | + | chr4.1:134377-134396 | MS.gene047035:CDS | 35.0% |
| !! | TCTTATGCTTTTTACTGCAC+AGG | + | chr4.1:133305-133324 | MS.gene047035:intron | 35.0% |
| !!! | GTGCGATGCATTTTTTTAGA+TGG | + | chr4.1:134938-134957 | MS.gene047035:intron | 35.0% |
| !!! | TGTTCTAGTTTTCTTGCAGT+AGG | + | chr4.1:134151-134170 | MS.gene047035:intron | 35.0% |
| AAAGAGATTGACAGTGTGGT+GGG | + | chr4.1:135925-135944 | MS.gene047035:CDS | 40.0% | |
| AACCACTCTCTGATACTTCT+CGG | - | chr4.1:135815-135834 | None:intergenic | 40.0% | |
| AAGGATATAGCCAACAGGAT+AGG | + | chr4.1:134837-134856 | MS.gene047035:intron | 40.0% | |
| AATAGATGTGTCCTGAACAC+GGG | + | chr4.1:133870-133889 | MS.gene047035:intron | 40.0% | |
| AATGACCCTCCTCAAAAGAT+GGG | + | chr4.1:132772-132791 | MS.gene047035:CDS | 40.0% | |
| ACCTAATACAGCAAATGAGC+GGG | + | chr4.1:134986-135005 | MS.gene047035:intron | 40.0% | |
| AGGATTATCAAGGGCTATGT+TGG | + | chr4.1:133143-133162 | MS.gene047035:CDS | 40.0% | |
| AGTGGTGAAATGTAACGACA+AGG | - | chr4.1:135778-135797 | None:intergenic | 40.0% | |
| ATGCGCATCAGTTATGGATA+GGG | - | chr4.1:133495-133514 | None:intergenic | 40.0% | |
| ATGGAAGAAACGAACCTTCA+AGG | - | chr4.1:133019-133038 | None:intergenic | 40.0% | |
| ATGTCTTTCCTTCTGCCTTA+TGG | + | chr4.1:134407-134426 | MS.gene047035:intron | 40.0% | |
| CACGGGTCAAATATCTAGTT+TGG | - | chr4.1:134778-134797 | None:intergenic | 40.0% | |
| CAGATAGATCATAGATGGGT+AGG | - | chr4.1:133585-133604 | None:intergenic | 40.0% | |
| CCCTTTACAATAACCATGTG+CGG | - | chr4.1:134803-134822 | None:intergenic | 40.0% | |
| CCGCACATGGTTATTGTAAA+GGG | + | chr4.1:134800-134819 | MS.gene047035:intron | 40.0% | |
| CCTTATAAAACCGGCATGAA+AGG | - | chr4.1:133919-133938 | None:intergenic | 40.0% | |
| CGAATAAGGATATAGCCAAC+AGG | + | chr4.1:134832-134851 | MS.gene047035:intron | 40.0% | |
| CGCTTGATCGAAATTACCTT+GGG | - | chr4.1:132875-132894 | None:intergenic | 40.0% | |
| CTCAAGTAACTGAAGACCAA+AGG | + | chr4.1:132806-132825 | MS.gene047035:CDS | 40.0% | |
| GAGACTCTTAACAGAAACTC+AGG | - | chr4.1:133679-133698 | None:intergenic | 40.0% | |
| GATAAAACGCAAACCATGCT+TGG | + | chr4.1:135231-135250 | MS.gene047035:intron | 40.0% | |
| GCAATTGATGCTATATCCCA+AGG | + | chr4.1:132856-132875 | MS.gene047035:CDS | 40.0% | |
| GCATAGAGTATGGATGAATG+TGG | - | chr4.1:132931-132950 | None:intergenic | 40.0% | |
| GCCAAAGGATACAAAATACG+AGG | + | chr4.1:133123-133142 | MS.gene047035:CDS | 40.0% | |
| GCCAAATGCCCATAAAATTG+AGG | + | chr4.1:133332-133351 | MS.gene047035:CDS | 40.0% | |
| GGATTATCAAGGGCTATGTT+GGG | + | chr4.1:133144-133163 | MS.gene047035:CDS | 40.0% | |
| GGTAACAATAGATTTAGGGG+TGG | + | chr4.1:134012-134031 | MS.gene047035:intron | 40.0% | |
| GTGGTGAAATGTAACGACAA+GGG | - | chr4.1:135777-135796 | None:intergenic | 40.0% | |
| TACTTTACTGCAACATGGTG+TGG | + | chr4.1:135751-135770 | MS.gene047035:CDS | 40.0% | |
| TATCCTGCAAAAAGGTCATG+AGG | - | chr4.1:134352-134371 | None:intergenic | 40.0% | |
| TATGCGCATCAGTTATGGAT+AGG | - | chr4.1:133496-133515 | None:intergenic | 40.0% | |
| TCACTTATAAACCCGTGTTC+AGG | - | chr4.1:133884-133903 | None:intergenic | 40.0% | |
| TCCGCACATGGTTATTGTAA+AGG | + | chr4.1:134799-134818 | MS.gene047035:intron | 40.0% | |
| TCTTCAGTTACTTGAGCAGA+AGG | - | chr4.1:132802-132821 | None:intergenic | 40.0% | |
| TGAACGCTTACGAAAGCAAA+AGG | + | chr4.1:133371-133390 | MS.gene047035:CDS | 40.0% | |
| TGAACTAAATGCATGGAGCA+AGG | - | chr4.1:135100-135119 | None:intergenic | 40.0% | |
| TGATGCGCATACTATACTAC+TGG | + | chr4.1:133505-133524 | MS.gene047035:intron | 40.0% | |
| TGTCATGGCTGAAAGATGAA+AGG | + | chr4.1:135139-135158 | MS.gene047035:intron | 40.0% | |
| TGTGTGGAATGGAACAAGTT+AGG | - | chr4.1:133046-133065 | None:intergenic | 40.0% | |
| TTCAAATCACTGACCAAGCA+TGG | - | chr4.1:135247-135266 | None:intergenic | 40.0% | |
| ! | AGTTGATATAGATGAGGCAG+TGG | + | chr4.1:135843-135862 | MS.gene047035:CDS | 40.0% |
| ! | ATTCCTCATGACCTTTTTGC+AGG | + | chr4.1:134346-134365 | MS.gene047035:intron | 40.0% |
| ! | CCCATAAAATTGAGGAGCAT+AGG | + | chr4.1:133340-133359 | MS.gene047035:CDS | 40.0% |
| ! | GAAGGAGTATGAAGAAGAGA+AGG | - | chr4.1:132536-132555 | None:intergenic | 40.0% |
| ! | GGGTCAAATATCTAGTTTGG+TGG | - | chr4.1:134775-134794 | None:intergenic | 40.0% |
| !! | AAATTTTTAGGCTGTGAGGC+AGG | - | chr4.1:134596-134615 | None:intergenic | 40.0% |
| !! | TTCCTTTGTTTGCTGTGTTG+TGG | + | chr4.1:135181-135200 | MS.gene047035:intron | 40.0% |
| !!! | CCTTTCATGCCGGTTTTATA+AGG | + | chr4.1:133916-133935 | MS.gene047035:intron | 40.0% |
| AAGAGATTGACAGTGTGGTG+GGG | + | chr4.1:135926-135945 | MS.gene047035:CDS | 45.0% | |
| AGGAAGATTGCTCAACATGC+CGG | + | chr4.1:135970-135989 | MS.gene047035:CDS | 45.0% | |
| AGTCATCAAAGTTCCGGCAA+TGG | + | chr4.1:134257-134276 | MS.gene047035:intron | 45.0% | |
| AGTGTCAGAATCACGGATAG+CGG | - | chr4.1:132995-133014 | None:intergenic | 45.0% | |
| ATAGTTGTGCAGCATCCCTT+TGG | - | chr4.1:132825-132844 | None:intergenic | 45.0% | |
| ATCAACATCAGGTTCCGTCT+TGG | - | chr4.1:132686-132705 | None:intergenic | 45.0% | |
| ATCAATCCAGACTCAGCCAA+AGG | + | chr4.1:133108-133127 | MS.gene047035:CDS | 45.0% | |
| CAAAGAGATTGACAGTGTGG+TGG | + | chr4.1:135924-135943 | MS.gene047035:CDS | 45.0% | |
| CAAGTTCTATTTGGCCACTC+GGG | + | chr4.1:133789-133808 | MS.gene047035:intron | 45.0% | |
| CAATGACCCTCCTCAAAAGA+TGG | + | chr4.1:132771-132790 | MS.gene047035:CDS | 45.0% | |
| CATACCCTAACACCCAAGAT+TGG | - | chr4.1:133830-133849 | None:intergenic | 45.0% | |
| CCAAGTTCTATTTGGCCACT+CGG | + | chr4.1:133788-133807 | MS.gene047035:intron | 45.0% | |
| CTGTCCAATCTTGGGTGTTA+GGG | + | chr4.1:133823-133842 | MS.gene047035:intron | 45.0% | |
| GCAATACTCACCTTTCATGC+CGG | + | chr4.1:133906-133925 | MS.gene047035:intron | 45.0% | |
| GCGCTTGATCGAAATTACCT+TGG | - | chr4.1:132876-132895 | None:intergenic | 45.0% | |
| TCAACATCAGGTTCCGTCTT+GGG | - | chr4.1:132685-132704 | None:intergenic | 45.0% | |
| TCAAGGCAGTGTCAGAATCA+CGG | - | chr4.1:133002-133021 | None:intergenic | 45.0% | |
| TCGGCCAAGCTTGTATAAAG+TGG | - | chr4.1:135796-135815 | None:intergenic | 45.0% | |
| TGATTCTGACACTGCCTTGA+AGG | + | chr4.1:133002-133021 | MS.gene047035:CDS | 45.0% | |
| TGCCACAACACAGCAAACAA+AGG | - | chr4.1:135186-135205 | None:intergenic | 45.0% | |
| TGGCAAAGAGATTGACAGTG+TGG | + | chr4.1:135921-135940 | MS.gene047035:CDS | 45.0% | |
| TTAGTGATAGGGTGTAGGGA+AGG | + | chr4.1:135293-135312 | MS.gene047035:intron | 45.0% | |
| TTGTATCCTTTGGCTGAGTC+TGG | - | chr4.1:133117-133136 | None:intergenic | 45.0% | |
| ! | ATTTTGCTGGGCGGCATTTT+GGG | + | chr4.1:134047-134066 | MS.gene047035:intron | 45.0% |
| ! | GAAGGATCACCCATCTTTTG+AGG | - | chr4.1:132784-132803 | None:intergenic | 45.0% |
| ! | TATTTTGCTGGGCGGCATTT+TGG | + | chr4.1:134046-134065 | MS.gene047035:intron | 45.0% |
| !! | GATCACCCATCTTTTGAGGA+GGG | - | chr4.1:132780-132799 | None:intergenic | 45.0% |
| !! | TCCCGCTCATTTGCTGTATT+AGG | - | chr4.1:134990-135009 | None:intergenic | 45.0% |
| !! | TTTTGAGGAGGGTCATTGTC+AGG | - | chr4.1:132769-132788 | None:intergenic | 45.0% |
| AACACCCAAGATTGGACAGC+CGG | - | chr4.1:133822-133841 | None:intergenic | 50.0% | |
| AATAACCATGTGCGGAGCAC+GGG | - | chr4.1:134795-134814 | None:intergenic | 50.0% | |
| AGAGATTGACAGTGTGGTGG+GGG | + | chr4.1:135927-135946 | MS.gene047035:CDS | 50.0% | |
| AGCCAACAACTTGCCATTGC+CGG | - | chr4.1:134273-134292 | None:intergenic | 50.0% | |
| ATCAGGTTCCGTCTTGGGTT+GGG | - | chr4.1:132680-132699 | None:intergenic | 50.0% | |
| CAATAACCATGTGCGGAGCA+CGG | - | chr4.1:134796-134815 | None:intergenic | 50.0% | |
| CCGAGTGGCCAAATAGAACT+TGG | - | chr4.1:133791-133810 | None:intergenic | 50.0% | |
| GAACAGCATGAGGCGGTAAT+AGG | - | chr4.1:134518-134537 | None:intergenic | 50.0% | |
| GCTGTCCAATCTTGGGTGTT+AGG | + | chr4.1:133822-133841 | MS.gene047035:intron | 50.0% | |
| GTGTCATGAACAGCATGAGG+CGG | - | chr4.1:134525-134544 | None:intergenic | 50.0% | |
| TGAGGCGGTAATAGGATCAG+AGG | - | chr4.1:134510-134529 | None:intergenic | 50.0% | |
| TGCGTGTCATGAACAGCATG+AGG | - | chr4.1:134528-134547 | None:intergenic | 50.0% | |
| TGGCTGAGTCTGGATTGATC+TGG | - | chr4.1:133107-133126 | None:intergenic | 50.0% | |
| TTCCGGCAATGGCAAGTTGT+TGG | + | chr4.1:134268-134287 | MS.gene047035:intron | 50.0% | |
| ! | AGCTCTGGTGGCATAGAGTA+TGG | - | chr4.1:132941-132960 | None:intergenic | 50.0% |
| ! | GAATCACGGATAGCGGCATT+TGG | - | chr4.1:132988-133007 | None:intergenic | 50.0% |
| !! | GCGGCATTTTGGGTCTTAGT+TGG | + | chr4.1:134057-134076 | MS.gene047035:intron | 50.0% |
| !! | GGATCACCCATCTTTTGAGG+AGG | - | chr4.1:132781-132800 | None:intergenic | 50.0% |
| CAAGGGCTATGTTGGGACTC+TGG | + | chr4.1:133151-133170 | MS.gene047035:CDS | 55.0% | |
| CATCAGGTTCCGTCTTGGGT+TGG | - | chr4.1:132681-132700 | None:intergenic | 55.0% | |
| ! | TCAGGTTCCGTCTTGGGTTG+GGG | - | chr4.1:132679-132698 | None:intergenic | 55.0% |
| !! | GGCCGAGAAGTATCAGAGAG+TGG | + | chr4.1:135810-135829 | MS.gene047035:CDS | 55.0% |
| ACGCTCCGGCTGTCCAATCT+TGG | + | chr4.1:133814-133833 | MS.gene047035:intron | 60.0% | |
| CATCCCTCCCCAACCCAAGA+CGG | + | chr4.1:132669-132688 | MS.gene047035:CDS | 60.0% | |
| CGCTCCGGCTGTCCAATCTT+GGG | + | chr4.1:133815-133834 | MS.gene047035:intron | 60.0% | |
| TTTGACCCGTGCTCCGCACA+TGG | + | chr4.1:134787-134806 | MS.gene047035:intron | 60.0% | |
| !! | GTTCCGTCTTGGGTTGGGGA+GGG | - | chr4.1:132675-132694 | None:intergenic | 60.0% |
| CAGTGGATGTCGCAGCACGC+TGG | + | chr4.1:135860-135879 | MS.gene047035:CDS | 65.0% | |
| TGGCCACTCGGGTTACGCTC+CGG | + | chr4.1:133800-133819 | MS.gene047035:intron | 65.0% | |
| !! | GGTTCCGTCTTGGGTTGGGG+AGG | - | chr4.1:132676-132695 | None:intergenic | 65.0% |
| CAGCCGGAGCGTAACCCGAG+TGG | - | chr4.1:133806-133825 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 132476 | 136002 | 132476 | ID=MS.gene047035 |
| chr4.1 | mRNA | 132476 | 136002 | 132476 | ID=MS.gene047035.t1;Parent=MS.gene047035 |
| chr4.1 | exon | 132476 | 132585 | 132476 | ID=MS.gene047035.t1.exon1;Parent=MS.gene047035.t1 |
| chr4.1 | CDS | 132476 | 132585 | 132476 | ID=cds.MS.gene047035.t1;Parent=MS.gene047035.t1 |
| chr4.1 | exon | 132657 | 133023 | 132657 | ID=MS.gene047035.t1.exon2;Parent=MS.gene047035.t1 |
| chr4.1 | CDS | 132657 | 133023 | 132657 | ID=cds.MS.gene047035.t1;Parent=MS.gene047035.t1 |
| chr4.1 | exon | 133108 | 133248 | 133108 | ID=MS.gene047035.t1.exon3;Parent=MS.gene047035.t1 |
| chr4.1 | CDS | 133108 | 133248 | 133108 | ID=cds.MS.gene047035.t1;Parent=MS.gene047035.t1 |
| chr4.1 | exon | 133327 | 133440 | 133327 | ID=MS.gene047035.t1.exon4;Parent=MS.gene047035.t1 |
| chr4.1 | CDS | 133327 | 133440 | 133327 | ID=cds.MS.gene047035.t1;Parent=MS.gene047035.t1 |
| chr4.1 | exon | 134368 | 134398 | 134368 | ID=MS.gene047035.t1.exon5;Parent=MS.gene047035.t1 |
| chr4.1 | CDS | 134368 | 134398 | 134368 | ID=cds.MS.gene047035.t1;Parent=MS.gene047035.t1 |
| chr4.1 | exon | 135668 | 136002 | 135668 | ID=MS.gene047035.t1.exon6;Parent=MS.gene047035.t1 |
| chr4.1 | CDS | 135668 | 136002 | 135668 | ID=cds.MS.gene047035.t1;Parent=MS.gene047035.t1 |
| Gene Sequence |
| Protein sequence |
