Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene047196.t1 | XP_003592967.1 | 94.7 | 457 | 15 | 1 | 1 | 448 | 33 | 489 | 7.50E-153 | 550.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene047196.t1 | O49429 | 47.3 | 241 | 93 | 7 | 25 | 243 | 14 | 242 | 2.5e-48 | 194.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene047196.t1 | G7INP0 | 94.7 | 457 | 15 | 1 | 1 | 448 | 33 | 489 | 5.4e-153 | 550.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene033382 | MS.gene047196 | PPI |
MS.gene013822 | MS.gene047196 | PPI |
MS.gene80094 | MS.gene047196 | PPI |
MS.gene91416 | MS.gene047196 | PPI |
MS.gene045065 | MS.gene047196 | PPI |
MS.gene75426 | MS.gene047196 | PPI |
MS.gene72993 | MS.gene047196 | PPI |
MS.gene62799 | MS.gene047196 | PPI |
MS.gene99648 | MS.gene047196 | PPI |
MS.gene92318 | MS.gene047196 | PPI |
MS.gene024895 | MS.gene047196 | PPI |
MS.gene011421 | MS.gene047196 | PPI |
MS.gene000128 | MS.gene047196 | PPI |
MS.gene02591 | MS.gene047196 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene047196.t1 | MTR_2g006210 | 90.787 | 445 | 24 | 2 | 17 | 448 | 49 | 489 | 0.0 | 807 |
MS.gene047196.t1 | MTR_2g006240 | 77.095 | 179 | 38 | 1 | 1 | 179 | 1 | 176 | 2.90e-89 | 270 |
MS.gene047196.t1 | MTR_2g011000 | 53.968 | 126 | 57 | 1 | 83 | 208 | 66 | 190 | 2.70e-39 | 141 |
MS.gene047196.t1 | MTR_4g120340 | 54.464 | 112 | 50 | 1 | 83 | 194 | 80 | 190 | 1.65e-37 | 138 |
MS.gene047196.t1 | MTR_1g041745 | 45.223 | 157 | 69 | 4 | 55 | 198 | 35 | 187 | 4.07e-31 | 119 |
MS.gene047196.t1 | MTR_1g075460 | 49.558 | 113 | 56 | 1 | 86 | 198 | 94 | 205 | 3.60e-29 | 114 |
MS.gene047196.t1 | MTR_3g055620 | 84.127 | 63 | 10 | 0 | 226 | 288 | 21 | 83 | 1.10e-27 | 105 |
MS.gene047196.t1 | MTR_1g041745 | 57.292 | 96 | 40 | 1 | 86 | 181 | 76 | 170 | 1.76e-26 | 105 |
MS.gene047196.t1 | MTR_2g078090 | 45.133 | 113 | 60 | 2 | 83 | 195 | 86 | 196 | 4.05e-23 | 100 |
MS.gene047196.t1 | MTR_1g009840 | 32.653 | 343 | 171 | 15 | 6 | 322 | 5 | 313 | 4.49e-23 | 99.8 |
MS.gene047196.t1 | MTR_6g043040 | 37.864 | 103 | 54 | 3 | 89 | 186 | 72 | 169 | 1.66e-12 | 65.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene047196.t1 | AT4G20020 | 44.361 | 266 | 114 | 8 | 15 | 257 | 1 | 255 | 5.66e-61 | 204 |
MS.gene047196.t1 | AT4G20020 | 44.361 | 266 | 114 | 8 | 15 | 257 | 1 | 255 | 1.57e-60 | 203 |
MS.gene047196.t1 | AT5G44780 | 54.545 | 143 | 61 | 2 | 59 | 197 | 45 | 187 | 6.10e-42 | 158 |
MS.gene047196.t1 | AT1G11430 | 60.909 | 110 | 42 | 1 | 83 | 192 | 78 | 186 | 3.05e-40 | 144 |
MS.gene047196.t1 | AT3G06790 | 57.143 | 112 | 46 | 2 | 83 | 194 | 85 | 194 | 1.82e-36 | 134 |
MS.gene047196.t1 | AT3G06790 | 57.143 | 112 | 46 | 2 | 83 | 194 | 85 | 194 | 2.69e-36 | 134 |
MS.gene047196.t1 | AT2G35240 | 45.833 | 144 | 64 | 3 | 86 | 227 | 90 | 221 | 2.09e-31 | 120 |
MS.gene047196.t1 | AT1G32580 | 43.791 | 153 | 72 | 3 | 86 | 236 | 87 | 227 | 8.33e-31 | 119 |
MS.gene047196.t1 | AT3G15000 | 36.410 | 195 | 112 | 5 | 2 | 195 | 15 | 198 | 3.73e-25 | 107 |
MS.gene047196.t1 | AT1G72530 | 38.318 | 107 | 64 | 2 | 86 | 192 | 48 | 152 | 2.04e-17 | 80.5 |
MS.gene047196.t1 | AT1G72530 | 36.937 | 111 | 64 | 3 | 86 | 192 | 48 | 156 | 2.98e-15 | 74.3 |
MS.gene047196.t1 | AT1G53260 | 46.774 | 62 | 33 | 0 | 134 | 195 | 2 | 63 | 1.05e-11 | 65.1 |
MS.gene047196.t1 | AT1G53260 | 47.458 | 59 | 31 | 0 | 134 | 192 | 2 | 60 | 1.24e-11 | 65.5 |
Find 150 sgRNAs with CRISPR-Local
Find 192 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAGCATGATTATTCCCCTTC+TGG | 0.152275 | 2.2:-73395898 | None:intergenic |
ACAAATACCTTCAAATTTCT+TGG | 0.193516 | 2.2:-73394563 | None:intergenic |
GCTGAATCAAACCGGATATT+TGG | 0.205342 | 2.2:-73395443 | None:intergenic |
TATGCGCCGCAGCAAAATTT+TGG | 0.234811 | 2.2:+73395734 | MS.gene047196:CDS |
GATGAAATAGAACCGGTAAT+TGG | 0.256818 | 2.2:-73394095 | None:intergenic |
AGGTGGAGGTTTGTTATCTC+TGG | 0.258166 | 2.2:-73394306 | None:intergenic |
GTGCTAAGGGTTTCAATATC+AGG | 0.262167 | 2.2:+73394360 | MS.gene047196:CDS |
CGACCTCCACCAGTACAATT+TGG | 0.262627 | 2.2:+73395224 | MS.gene047196:CDS |
TCGCTTTCGGTCCCAATTAC+CGG | 0.272059 | 2.2:+73394083 | MS.gene047196:CDS |
CGGAGTTATCTTTGTGTTGC+CGG | 0.290339 | 2.2:+73394962 | MS.gene047196:CDS |
TGAACGCCGTCGACGACGTT+TGG | 0.320333 | 2.2:-73394140 | None:intergenic |
GGATTTCAAACCATCATATA+TGG | 0.330866 | 2.2:+73395859 | MS.gene047196:CDS |
GAACGCCGTCGACGACGTTT+GGG | 0.334529 | 2.2:-73394139 | None:intergenic |
AGCTACTGCGACTTCGCTTT+CGG | 0.360324 | 2.2:+73394070 | MS.gene047196:CDS |
GTGCTTGATCATAGCTCTGC+TGG | 0.368496 | 2.2:-73395484 | None:intergenic |
GAGGGATTCCCTCGGTTGTT+TGG | 0.372916 | 2.2:-73395293 | None:intergenic |
ATGCGCCACGGCAGAACTTT+GGG | 0.375645 | 2.2:+73395684 | MS.gene047196:CDS |
AGCATGATTATTCCCCTTCT+GGG | 0.387365 | 2.2:-73395897 | None:intergenic |
CCAAGGGATGGTAGAAACTA+TGG | 0.387810 | 2.2:+73395338 | MS.gene047196:CDS |
TTCTTTCTCCTTGTCCTGGC+GGG | 0.390261 | 2.2:-73395757 | None:intergenic |
CCTCCATACTGCTTGTTCAC+AGG | 0.391130 | 2.2:-73394999 | None:intergenic |
TATGCGCCACGGCAGAACTT+TGG | 0.400286 | 2.2:+73395683 | MS.gene047196:CDS |
ATGAAATAGAACCGGTAATT+GGG | 0.400337 | 2.2:-73394094 | None:intergenic |
TTTCCACCTCAACAGAACTA+TGG | 0.401446 | 2.2:+73395374 | MS.gene047196:CDS |
TGCTTGATCATAGCTCTGCT+GGG | 0.408969 | 2.2:-73395483 | None:intergenic |
ACCGGATATTTGGTTGTTGT+TGG | 0.414885 | 2.2:-73395433 | None:intergenic |
GGAATCCCTCTTACAACAAT+CGG | 0.421869 | 2.2:+73395306 | MS.gene047196:CDS |
GTACAATTTGGGAGAAATCT+AGG | 0.426083 | 2.2:+73395236 | MS.gene047196:CDS |
TTTCTTCTTTCTCCTTGTCC+TGG | 0.430267 | 2.2:-73395761 | None:intergenic |
GACCTCCACCAGTACAATTT+GGG | 0.430347 | 2.2:+73395225 | MS.gene047196:CDS |
AGGACCATAGGTTTGCTGTT+TGG | 0.430424 | 2.2:-73395597 | None:intergenic |
TATCCACCCAAACAAAACTA+TGG | 0.437816 | 2.2:+73395515 | MS.gene047196:CDS |
GACCCTGTGAACAAGCAGTA+TGG | 0.438673 | 2.2:+73394996 | MS.gene047196:CDS |
CGAATCATTTCTTCAGGTGG+AGG | 0.439284 | 2.2:-73394320 | None:intergenic |
TATGCGCCACAGCAGAACTT+TGG | 0.449668 | 2.2:+73395785 | MS.gene047196:CDS |
TTTCTTCTTTCTCCTTCTCC+CGG | 0.453717 | 2.2:-73395659 | None:intergenic |
GAAGAGTCCAAGAAATTTGA+AGG | 0.456510 | 2.2:+73394556 | MS.gene047196:CDS |
CAGGAGGCGGAAATCTTTGT+TGG | 0.457098 | 2.2:-73395937 | None:intergenic |
GCCAACAACAACCAAATATC+CGG | 0.458194 | 2.2:+73395432 | MS.gene047196:CDS |
TCAAATTCCTCCATATATGA+TGG | 0.460060 | 2.2:-73395869 | None:intergenic |
TTTCCTCTTTCTCCCTGTCC+CGG | 0.461374 | 2.2:-73395812 | None:intergenic |
TATCCACCACAGCAGAGCTT+TGG | 0.463958 | 2.2:+73395632 | MS.gene047196:CDS |
GAACTTTGGACCACCGGGAC+AGG | 0.464751 | 2.2:+73395799 | MS.gene047196:CDS |
CGAGGTTGATCTGAATGAAC+GGG | 0.468117 | 2.2:-73394165 | None:intergenic |
ACAGCAGAGCTTTGGACCAC+CGG | 0.470038 | 2.2:+73395640 | MS.gene047196:CDS |
GGAATCCCGATTGTTGTAAG+AGG | 0.470092 | 2.2:-73395312 | None:intergenic |
CAACAAAGATTTCCGCCTCC+TGG | 0.472277 | 2.2:+73395938 | MS.gene047196:CDS |
AGATTTCTCCCAAATTGTAC+TGG | 0.474613 | 2.2:-73395233 | None:intergenic |
AATTGTACTGGTGGAGGTCG+AGG | 0.477720 | 2.2:-73395221 | None:intergenic |
CGGCAGAACTTTGGGCCACC+GGG | 0.483926 | 2.2:+73395692 | MS.gene047196:CDS |
TTATGAAGAAACTTGTGCTA+AGG | 0.485239 | 2.2:+73394346 | MS.gene047196:CDS |
ACGGCAGAACTTTGGGCCAC+CGG | 0.489335 | 2.2:+73395691 | MS.gene047196:CDS |
TATGAAGAAACTTGTGCTAA+GGG | 0.489463 | 2.2:+73394347 | MS.gene047196:CDS |
ATGGTGTCAGGACCAATCTC+AGG | 0.489874 | 2.2:-73394233 | None:intergenic |
GGTGGAGGTTTGTTATCTCT+GGG | 0.493016 | 2.2:-73394305 | None:intergenic |
CCTTCGAAGAGGATGGTGTC+AGG | 0.493439 | 2.2:-73394245 | None:intergenic |
CTCCATACTGCTTGTTCACA+GGG | 0.493888 | 2.2:-73394998 | None:intergenic |
CCAGTAAAATTGCTAGGGCC+AGG | 0.494495 | 2.2:-73395956 | None:intergenic |
CCACCGGGACAGGGAGAAAG+AGG | 0.494921 | 2.2:+73395809 | MS.gene047196:CDS |
CGAAGTCGCAGTAGCTGAGA+AGG | 0.498879 | 2.2:-73394063 | None:intergenic |
CTCCCAAATTGTACTGGTGG+AGG | 0.499376 | 2.2:-73395227 | None:intergenic |
TCAGAACTCAGTCCTGAGAT+TGG | 0.500163 | 2.2:+73394221 | MS.gene047196:CDS |
AGGAGGCGGAAATCTTTGTT+GGG | 0.503310 | 2.2:-73395936 | None:intergenic |
ACAGCAGAACTTTGGACCAC+CGG | 0.505295 | 2.2:+73395793 | MS.gene047196:CDS |
ACAGGGTCAATGTAAGAATC+CGG | 0.508563 | 2.2:-73394981 | None:intergenic |
AAAATGTGATGAAATAGAAC+CGG | 0.509305 | 2.2:-73394102 | None:intergenic |
TCTCTCTTGTCTTCTCGCTA+CGG | 0.509897 | 2.2:+73394191 | MS.gene047196:CDS |
CTTCTTCTGTCTACTTCTCC+CGG | 0.510565 | 2.2:-73395710 | None:intergenic |
TGAGAAGGAGTGGTGGAGGC+CGG | 0.512480 | 2.2:-73394048 | None:intergenic |
AAGGTTGCGATTACAATCAC+TGG | 0.516564 | 2.2:+73394264 | MS.gene047196:CDS |
TATTCCAAACAGCAAACCTA+TGG | 0.521162 | 2.2:+73395593 | MS.gene047196:CDS |
GAGAATTAGCGACGATGCCA+TGG | 0.522594 | 2.2:-73394000 | None:intergenic |
GCTGCGATGCTGAATCAAAC+CGG | 0.524624 | 2.2:-73395451 | None:intergenic |
CTGTGCCTAGTGAAGGTGGA+TGG | 0.529404 | 2.2:+73395837 | MS.gene047196:CDS |
GTGATCTCAGGCTACGGCGG+AGG | 0.532432 | 2.2:-73394022 | None:intergenic |
GGTGGATACTGTGGCGAAGC+AGG | 0.533094 | 2.2:-73395617 | None:intergenic |
CCATAGTTTCTACCATCCCT+TGG | 0.533589 | 2.2:-73395338 | None:intergenic |
TGCAGTACAACTGTTTACAC+TGG | 0.536636 | 2.2:+73394511 | MS.gene047196:CDS |
ACCTCTCCAGTAAAATTGCT+AGG | 0.537861 | 2.2:-73395962 | None:intergenic |
AAACGAATCATTTCTTCAGG+TGG | 0.541590 | 2.2:-73394323 | None:intergenic |
TAGCTGAGAAGGAGTGGTGG+AGG | 0.542761 | 2.2:-73394052 | None:intergenic |
GAATCCCTCTTACAACAATC+GGG | 0.542891 | 2.2:+73395307 | MS.gene047196:CDS |
AGCTTTGGACCACCGGGAGA+AGG | 0.543753 | 2.2:+73395647 | MS.gene047196:CDS |
GGAATTTGAACAAGCCCAGA+AGG | 0.546452 | 2.2:+73395883 | MS.gene047196:CDS |
AAATCCCATCCACCTTCACT+AGG | 0.549954 | 2.2:-73395842 | None:intergenic |
TGATCATAGCTCTGCTGGGG+TGG | 0.551769 | 2.2:-73395479 | None:intergenic |
CTTCTTTCTCCTTGTCCTGG+CGG | 0.551794 | 2.2:-73395758 | None:intergenic |
CTGTGGCGAAGCAGGACCAT+AGG | 0.556513 | 2.2:-73395609 | None:intergenic |
GTGGAGGAATGTGTGATGCT+TGG | 0.556911 | 2.2:-73395397 | None:intergenic |
GGTCCAAAGCTCTGCTGTGG+TGG | 0.557931 | 2.2:-73395635 | None:intergenic |
TTTCTCCCAAATTGTACTGG+TGG | 0.558252 | 2.2:-73395230 | None:intergenic |
ACAGGAGATCAGTACATTGA+AGG | 0.559699 | 2.2:+73395188 | MS.gene047196:intron |
TCGAGGTTGATCTGAATGAA+CGG | 0.562081 | 2.2:-73394166 | None:intergenic |
AACGCCGTCGACGACGTTTG+GGG | 0.563351 | 2.2:-73394138 | None:intergenic |
GTTTCTACCATCCCTTGGCA+TGG | 0.563433 | 2.2:-73395333 | None:intergenic |
TGTGCCTAGTGAAGGTGGAT+GGG | 0.564317 | 2.2:+73395838 | MS.gene047196:CDS |
GGCAACACAAAGATAACTCC+GGG | 0.564421 | 2.2:-73394960 | None:intergenic |
CAGCAGAACTTTGGACCACC+GGG | 0.568755 | 2.2:+73395794 | MS.gene047196:CDS |
AACTCTGTGCCTAGTGAAGG+TGG | 0.569286 | 2.2:+73395833 | MS.gene047196:CDS |
CAGCAGAGCTTTGGACCACC+GGG | 0.574321 | 2.2:+73395641 | MS.gene047196:CDS |
CGGCAACACAAAGATAACTC+CGG | 0.575792 | 2.2:-73394961 | None:intergenic |
GGAGGCCGGAGAGTGATCTC+AGG | 0.580525 | 2.2:-73394034 | None:intergenic |
TCGCAGTAGCTGAGAAGGAG+TGG | 0.580953 | 2.2:-73394058 | None:intergenic |
CCTGACACCATCCTCTTCGA+AGG | 0.582398 | 2.2:+73394245 | MS.gene047196:CDS |
TAATCATGCTGAAGAACAGA+CGG | 0.584349 | 2.2:+73395910 | MS.gene047196:CDS |
GGAAACTCTGTGCCTAGTGA+AGG | 0.586295 | 2.2:+73395830 | MS.gene047196:CDS |
GAATCCCGATTGTTGTAAGA+GGG | 0.586300 | 2.2:-73395311 | None:intergenic |
AACTTTGGACCACCGGGACA+GGG | 0.587378 | 2.2:+73395800 | MS.gene047196:CDS |
CCTCTTTCTCCCTGTCCCGG+TGG | 0.592801 | 2.2:-73395809 | None:intergenic |
CCTCTCCAGTAAAATTGCTA+GGG | 0.592900 | 2.2:-73395961 | None:intergenic |
TAGGAGGAAGACGAGACTAT+CGG | 0.594936 | 2.2:+73395255 | MS.gene047196:CDS |
CGGGATTCCATGCCAAGGGA+TGG | 0.595865 | 2.2:+73395326 | MS.gene047196:CDS |
AGCTATGATCAAGCACCACA+AGG | 0.596634 | 2.2:+73395491 | MS.gene047196:CDS |
CTCTGCTGTGGTGGATACTG+TGG | 0.600550 | 2.2:-73395626 | None:intergenic |
CGGAGAGTGATCTCAGGCTA+CGG | 0.601292 | 2.2:-73394028 | None:intergenic |
TGGCCATAGTTCTGTTGAGG+TGG | 0.603738 | 2.2:-73395377 | None:intergenic |
GCTTGGCCATAGTTCTGTTG+AGG | 0.603846 | 2.2:-73395380 | None:intergenic |
ATTGTACTGGTGGAGGTCGA+GGG | 0.609778 | 2.2:-73395220 | None:intergenic |
AAATTGCTAGGGCCAGGAGG+CGG | 0.610340 | 2.2:-73395950 | None:intergenic |
ATCAATTGCCAAACAACCGA+GGG | 0.610471 | 2.2:+73395285 | MS.gene047196:CDS |
CTTCTTTCTCCTTCTCCCGG+TGG | 0.610979 | 2.2:-73395656 | None:intergenic |
TGTTGTAAGAGGGATTCCCT+CGG | 0.611597 | 2.2:-73395301 | None:intergenic |
AATCATGCTGAAGAACAGAC+GGG | 0.612561 | 2.2:+73395911 | MS.gene047196:CDS |
AAATCCCCAAACGTCGTCGA+CGG | 0.615141 | 2.2:+73394134 | MS.gene047196:CDS |
ATCGCAACCTTCGAAGAGGA+TGG | 0.615614 | 2.2:-73394252 | None:intergenic |
CAGTAGCTGAGAAGGAGTGG+TGG | 0.617757 | 2.2:-73394055 | None:intergenic |
GGTGGTCCAAAGTTCTGCTG+TGG | 0.619499 | 2.2:-73395791 | None:intergenic |
GGTGGCCCAAAGTTCTGCCG+TGG | 0.626931 | 2.2:-73395689 | None:intergenic |
GGTGGTCCAAAGCTCTGCTG+TGG | 0.627905 | 2.2:-73395638 | None:intergenic |
GAATTTGAACAAGCCCAGAA+GGG | 0.628457 | 2.2:+73395884 | MS.gene047196:CDS |
AGAAGACAAGAGAGAAATCG+AGG | 0.630277 | 2.2:-73394183 | None:intergenic |
TTTCAAACCATCATATATGG+AGG | 0.632324 | 2.2:+73395862 | MS.gene047196:CDS |
ATTCCTCCACAACAAAACAT+TGG | 0.633304 | 2.2:+73395410 | MS.gene047196:CDS |
CAATCGGGATTCCATGCCAA+GGG | 0.634508 | 2.2:+73395322 | MS.gene047196:CDS |
AATTTGAACAAGCCCAGAAG+GGG | 0.637787 | 2.2:+73395885 | MS.gene047196:CDS |
ACAATCGGGATTCCATGCCA+AGG | 0.637883 | 2.2:+73395321 | MS.gene047196:CDS |
AAAGAAGAAATTATGCGCCA+CGG | 0.637957 | 2.2:+73395672 | MS.gene047196:CDS |
AATCAATTGCCAAACAACCG+AGG | 0.644295 | 2.2:+73395284 | MS.gene047196:CDS |
CGCTTGATTGAAGTTCTGCG+AGG | 0.644978 | 2.2:-73395561 | None:intergenic |
GCTTGATCATAGCTCTGCTG+GGG | 0.651267 | 2.2:-73395482 | None:intergenic |
TGTAATCGCAACCTTCGAAG+AGG | 0.655228 | 2.2:-73394256 | None:intergenic |
TGTTTGGGTGGATACCCTTG+TGG | 0.664703 | 2.2:-73395506 | None:intergenic |
GTAAAATTGCTAGGGCCAGG+AGG | 0.666157 | 2.2:-73395953 | None:intergenic |
CCTGTGAACAAGCAGTATGG+AGG | 0.671051 | 2.2:+73394999 | MS.gene047196:CDS |
GCTATGATCAAGCACCACAA+GGG | 0.671691 | 2.2:+73395492 | MS.gene047196:CDS |
CGTAGCCTGAGATCACTCTC+CGG | 0.691705 | 2.2:+73394029 | MS.gene047196:CDS |
CTTCTGTCTACTTCTCCCGG+TGG | 0.703848 | 2.2:-73395707 | None:intergenic |
AGAGTGATCTCAGGCTACGG+CGG | 0.711287 | 2.2:-73394025 | None:intergenic |
CAATTTGGGAGAAATCTAGG+AGG | 0.741053 | 2.2:+73395239 | MS.gene047196:CDS |
ATCATGCTGAAGAACAGACG+GGG | 0.746376 | 2.2:+73395912 | MS.gene047196:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATTTAGAAAGATTAATATTA+TGG | + | chr2.2:73394421-73394440 | MS.gene047196:intron | 10.0% |
!!! | GTAAATTAAAAAAGTAATTT+TGG | + | chr2.2:73394719-73394738 | MS.gene047196:intron | 10.0% |
!! | AACAAAAAAAAAAATTGCAA+AGG | + | chr2.2:73396031-73396050 | MS.gene047196:intron | 15.0% |
!!! | TTATACAATGTATCATTTTT+TGG | - | chr2.2:73394836-73394855 | None:intergenic | 15.0% |
!! | TTTATGGTTTCTTAAATACT+TGG | + | chr2.2:73395113-73395132 | MS.gene047196:intron | 20.0% |
!!! | AATGCAAGCTATTTTATTTA+TGG | + | chr2.2:73395097-73395116 | MS.gene047196:intron | 20.0% |
!!! | TGTTTTTGTTATTTTATGCA+GGG | + | chr2.2:73396140-73396159 | MS.gene047196:intron | 20.0% |
!!! | TTGTTTTTGTTATTTTATGC+AGG | + | chr2.2:73396139-73396158 | MS.gene047196:intron | 20.0% |
! | AAAATGTGATGAAATAGAAC+CGG | - | chr2.2:73394105-73394124 | None:intergenic | 25.0% |
! | AAATAGGTCAATGAAATCTA+AGG | - | chr2.2:73394887-73394906 | None:intergenic | 25.0% |
! | AATAGGTCAATGAAATCTAA+GGG | - | chr2.2:73394886-73394905 | None:intergenic | 25.0% |
! | ACAAATACCTTCAAATTTCT+TGG | - | chr2.2:73394566-73394585 | None:intergenic | 25.0% |
! | ATTTATTTGAGAGCAACTTT+CGG | + | chr2.2:73395157-73395176 | MS.gene047196:intron | 25.0% |
! | CAATGAAATCTAATCTAAGT+CGG | - | chr2.2:73394597-73394616 | None:intergenic | 25.0% |
! | CTTTCTAATCTATAACAAAC+AGG | - | chr2.2:73394633-73394652 | None:intergenic | 25.0% |
! | TAAAAACGAATCATTTCTTC+AGG | - | chr2.2:73394329-73394348 | None:intergenic | 25.0% |
! | TCTATTGTCTCAACTAAAAT+AGG | - | chr2.2:73394903-73394922 | None:intergenic | 25.0% |
!! | GAGACAATAGAAAATGATTT+TGG | + | chr2.2:73394912-73394931 | MS.gene047196:intron | 25.0% |
!!! | TGATTTTTTTAGTGTTGAAG+AGG | + | chr2.2:73394468-73394487 | MS.gene047196:intron | 25.0% |
ATGAAATAGAACCGGTAATT+GGG | - | chr2.2:73394097-73394116 | None:intergenic | 30.0% | |
ATTCTTAAAGAAGCCACAAA+TGG | + | chr2.2:73394859-73394878 | MS.gene047196:intron | 30.0% | |
GATTTCATTGACCTAGTTTA+TGG | + | chr2.2:73394607-73394626 | MS.gene047196:intron | 30.0% | |
GGATTTCAAACCATCATATA+TGG | + | chr2.2:73395859-73395878 | MS.gene047196:CDS | 30.0% | |
TACACATGATTCGTAAAACA+AGG | - | chr2.2:73396068-73396087 | None:intergenic | 30.0% | |
TATGAAGAAACTTGTGCTAA+GGG | + | chr2.2:73394347-73394366 | MS.gene047196:CDS | 30.0% | |
TCAAATTCCTCCATATATGA+TGG | - | chr2.2:73395872-73395891 | None:intergenic | 30.0% | |
TTATGAAGAAACTTGTGCTA+AGG | + | chr2.2:73394346-73394365 | MS.gene047196:CDS | 30.0% | |
TTCTTAAAGAAGCCACAAAT+GGG | + | chr2.2:73394860-73394879 | MS.gene047196:intron | 30.0% | |
TTTCAAACCATCATATATGG+AGG | + | chr2.2:73395862-73395881 | MS.gene047196:CDS | 30.0% | |
! | AGAGGTATGATAGAATAGAA+TGG | + | chr2.2:73395979-73395998 | MS.gene047196:intron | 30.0% |
AAACGAATCATTTCTTCAGG+TGG | - | chr2.2:73394326-73394345 | None:intergenic | 35.0% | |
AAAGAAGAAATTATGCGCCA+CGG | + | chr2.2:73395672-73395691 | MS.gene047196:CDS | 35.0% | |
AGATTTCTCCCAAATTGTAC+TGG | - | chr2.2:73395236-73395255 | None:intergenic | 35.0% | |
ATTCCTCCACAACAAAACAT+TGG | + | chr2.2:73395410-73395429 | MS.gene047196:CDS | 35.0% | |
CGAATCATGTGTACTGTAAA+TGG | + | chr2.2:73396075-73396094 | MS.gene047196:intron | 35.0% | |
GAAGAGTCCAAGAAATTTGA+AGG | + | chr2.2:73394556-73394575 | MS.gene047196:CDS | 35.0% | |
GATGAAATAGAACCGGTAAT+TGG | - | chr2.2:73394098-73394117 | None:intergenic | 35.0% | |
GTACAATTTGGGAGAAATCT+AGG | + | chr2.2:73395236-73395255 | MS.gene047196:CDS | 35.0% | |
TAACAAACAGGCCATAAACT+AGG | - | chr2.2:73394621-73394640 | None:intergenic | 35.0% | |
TAATCATGCTGAAGAACAGA+CGG | + | chr2.2:73395910-73395929 | MS.gene047196:CDS | 35.0% | |
TATCCACCCAAACAAAACTA+TGG | + | chr2.2:73395515-73395534 | MS.gene047196:CDS | 35.0% | |
TATTCCAAACAGCAAACCTA+TGG | + | chr2.2:73395593-73395612 | MS.gene047196:CDS | 35.0% | |
! | TGTTGAGGTGGAAAATTTTG+TGG | - | chr2.2:73395368-73395387 | None:intergenic | 35.0% |
!! | TGCTGTTTGGAATAGTTTTG+TGG | - | chr2.2:73395587-73395606 | None:intergenic | 35.0% |
!!! | AGCTTGACCATAGTTTTGTT+TGG | - | chr2.2:73395525-73395544 | None:intergenic | 35.0% |
!!! | GCTTGACCATAGTTTTGTTT+GGG | - | chr2.2:73395524-73395543 | None:intergenic | 35.0% |
AAGGTTGCGATTACAATCAC+TGG | + | chr2.2:73394264-73394283 | MS.gene047196:CDS | 40.0% | |
AATCAATTGCCAAACAACCG+AGG | + | chr2.2:73395284-73395303 | MS.gene047196:CDS | 40.0% | |
AATCATGCTGAAGAACAGAC+GGG | + | chr2.2:73395911-73395930 | MS.gene047196:CDS | 40.0% | |
AATTTGAACAAGCCCAGAAG+GGG | + | chr2.2:73395885-73395904 | MS.gene047196:CDS | 40.0% | |
ACAGGAGATCAGTACATTGA+AGG | + | chr2.2:73395188-73395207 | MS.gene047196:intron | 40.0% | |
ACAGGGTCAATGTAAGAATC+CGG | - | chr2.2:73394984-73395003 | None:intergenic | 40.0% | |
ACCGGATATTTGGTTGTTGT+TGG | - | chr2.2:73395436-73395455 | None:intergenic | 40.0% | |
ACCTCTCCAGTAAAATTGCT+AGG | - | chr2.2:73395965-73395984 | None:intergenic | 40.0% | |
AGAAGACAAGAGAGAAATCG+AGG | - | chr2.2:73394186-73394205 | None:intergenic | 40.0% | |
AGCATGATTATTCCCCTTCT+GGG | - | chr2.2:73395900-73395919 | None:intergenic | 40.0% | |
ATCAATTGCCAAACAACCGA+GGG | + | chr2.2:73395285-73395304 | MS.gene047196:CDS | 40.0% | |
CAATTTGGGAGAAATCTAGG+AGG | + | chr2.2:73395239-73395258 | MS.gene047196:CDS | 40.0% | |
CCTCTCCAGTAAAATTGCTA+GGG | - | chr2.2:73395964-73395983 | None:intergenic | 40.0% | |
GAATCCCGATTGTTGTAAGA+GGG | - | chr2.2:73395314-73395333 | None:intergenic | 40.0% | |
GAATCCCTCTTACAACAATC+GGG | + | chr2.2:73395307-73395326 | MS.gene047196:CDS | 40.0% | |
GAATTTGAACAAGCCCAGAA+GGG | + | chr2.2:73395884-73395903 | MS.gene047196:CDS | 40.0% | |
GCCAACAACAACCAAATATC+CGG | + | chr2.2:73395432-73395451 | MS.gene047196:CDS | 40.0% | |
GCTGAATCAAACCGGATATT+TGG | - | chr2.2:73395446-73395465 | None:intergenic | 40.0% | |
GGAATCCCTCTTACAACAAT+CGG | + | chr2.2:73395306-73395325 | MS.gene047196:CDS | 40.0% | |
GTGCTAAGGGTTTCAATATC+AGG | + | chr2.2:73394360-73394379 | MS.gene047196:CDS | 40.0% | |
TGCAGTACAACTGTTTACAC+TGG | + | chr2.2:73394511-73394530 | MS.gene047196:CDS | 40.0% | |
TTTCCACCTCAACAGAACTA+TGG | + | chr2.2:73395374-73395393 | MS.gene047196:CDS | 40.0% | |
TTTCTCCCAAATTGTACTGG+TGG | - | chr2.2:73395233-73395252 | None:intergenic | 40.0% | |
TTTCTTCTTTCTCCTTCTCC+CGG | - | chr2.2:73395662-73395681 | None:intergenic | 40.0% | |
TTTCTTCTTTCTCCTTGTCC+TGG | - | chr2.2:73395764-73395783 | None:intergenic | 40.0% | |
! | TCGAGGTTGATCTGAATGAA+CGG | - | chr2.2:73394169-73394188 | None:intergenic | 40.0% |
! | TGAGGTGGAAAATTTTGTGG+AGG | - | chr2.2:73395365-73395384 | None:intergenic | 40.0% |
! | TGCGAGGCTGAATAATTTTG+TGG | - | chr2.2:73395548-73395567 | None:intergenic | 40.0% |
!! | TGTTGGCCAATGTTTTGTTG+TGG | - | chr2.2:73395419-73395438 | None:intergenic | 40.0% |
!!! | TGACCATAGTTTTGTTTGGG+TGG | - | chr2.2:73395521-73395540 | None:intergenic | 40.0% |
AAATCCCATCCACCTTCACT+AGG | - | chr2.2:73395845-73395864 | None:intergenic | 45.0% | |
AGCTATGATCAAGCACCACA+AGG | + | chr2.2:73395491-73395510 | MS.gene047196:CDS | 45.0% | |
AGGAGGCGGAAATCTTTGTT+GGG | - | chr2.2:73395939-73395958 | None:intergenic | 45.0% | |
ATCATGCTGAAGAACAGACG+GGG | + | chr2.2:73395912-73395931 | MS.gene047196:CDS | 45.0% | |
ATTTATCGTCTCTCGCGTTC+TGG | + | chr2.2:73395040-73395059 | MS.gene047196:intron | 45.0% | |
CAGCATGATTATTCCCCTTC+TGG | - | chr2.2:73395901-73395920 | None:intergenic | 45.0% | |
CCAAGGGATGGTAGAAACTA+TGG | + | chr2.2:73395338-73395357 | MS.gene047196:CDS | 45.0% | |
CCATAGTTTCTACCATCCCT+TGG | - | chr2.2:73395341-73395360 | None:intergenic | 45.0% | |
CGAATCATTTCTTCAGGTGG+AGG | - | chr2.2:73394323-73394342 | None:intergenic | 45.0% | |
CGGAGTTATCTTTGTGTTGC+CGG | + | chr2.2:73394962-73394981 | MS.gene047196:CDS | 45.0% | |
CGGCAACACAAAGATAACTC+CGG | - | chr2.2:73394964-73394983 | None:intergenic | 45.0% | |
CTCCATACTGCTTGTTCACA+GGG | - | chr2.2:73395001-73395020 | None:intergenic | 45.0% | |
CTTCTTCTGTCTACTTCTCC+CGG | - | chr2.2:73395713-73395732 | None:intergenic | 45.0% | |
GAAATCTAAGGGCCCATTTG+TGG | - | chr2.2:73394875-73394894 | None:intergenic | 45.0% | |
GACCTCCACCAGTACAATTT+GGG | + | chr2.2:73395225-73395244 | MS.gene047196:CDS | 45.0% | |
GCTATGATCAAGCACCACAA+GGG | + | chr2.2:73395492-73395511 | MS.gene047196:CDS | 45.0% | |
GGAATCCCGATTGTTGTAAG+AGG | - | chr2.2:73395315-73395334 | None:intergenic | 45.0% | |
GGAATTTGAACAAGCCCAGA+AGG | + | chr2.2:73395883-73395902 | MS.gene047196:CDS | 45.0% | |
GGCAACACAAAGATAACTCC+GGG | - | chr2.2:73394963-73394982 | None:intergenic | 45.0% | |
TAGGAGGAAGACGAGACTAT+CGG | + | chr2.2:73395255-73395274 | MS.gene047196:CDS | 45.0% | |
TCAGAACTCAGTCCTGAGAT+TGG | + | chr2.2:73394221-73394240 | MS.gene047196:CDS | 45.0% | |
TCTCTCTTGTCTTCTCGCTA+CGG | + | chr2.2:73394191-73394210 | MS.gene047196:CDS | 45.0% | |
TGTAATCGCAACCTTCGAAG+AGG | - | chr2.2:73394259-73394278 | None:intergenic | 45.0% | |
TGTTGTAAGAGGGATTCCCT+CGG | - | chr2.2:73395304-73395323 | None:intergenic | 45.0% | |
! | CAACTTTCGGTGTGTGATAC+AGG | + | chr2.2:73395170-73395189 | MS.gene047196:intron | 45.0% |
! | CCCTAGCAATTTTACTGGAG+AGG | + | chr2.2:73395961-73395980 | MS.gene047196:CDS | 45.0% |
! | CGAGGTTGATCTGAATGAAC+GGG | - | chr2.2:73394168-73394187 | None:intergenic | 45.0% |
! | GGATTGTTGTGCTTTTCGAC+AGG | + | chr2.2:73394933-73394952 | MS.gene047196:intron | 45.0% |
! | TATGCGCCGCAGCAAAATTT+TGG | + | chr2.2:73395734-73395753 | MS.gene047196:CDS | 45.0% |
! | TGCTTGATCATAGCTCTGCT+GGG | - | chr2.2:73395486-73395505 | None:intergenic | 45.0% |
!! | AGGACCATAGGTTTGCTGTT+TGG | - | chr2.2:73395600-73395619 | None:intergenic | 45.0% |
!! | AGGTGGAGGTTTGTTATCTC+TGG | - | chr2.2:73394309-73394328 | None:intergenic | 45.0% |
!! | GGTGGAGGTTTGTTATCTCT+GGG | - | chr2.2:73394308-73394327 | None:intergenic | 45.0% |
!! | TGGCCAATGTTTTGTTGTGG+AGG | - | chr2.2:73395416-73395435 | None:intergenic | 45.0% |
AAATCCCCAAACGTCGTCGA+CGG | + | chr2.2:73394134-73394153 | MS.gene047196:CDS | 50.0% | |
AACTCTGTGCCTAGTGAAGG+TGG | + | chr2.2:73395833-73395852 | MS.gene047196:CDS | 50.0% | |
ACAATCGGGATTCCATGCCA+AGG | + | chr2.2:73395321-73395340 | MS.gene047196:CDS | 50.0% | |
ACAGCAGAACTTTGGACCAC+CGG | + | chr2.2:73395793-73395812 | MS.gene047196:CDS | 50.0% | |
AGCTACTGCGACTTCGCTTT+CGG | + | chr2.2:73394070-73394089 | MS.gene047196:CDS | 50.0% | |
ATCGCAACCTTCGAAGAGGA+TGG | - | chr2.2:73394255-73394274 | None:intergenic | 50.0% | |
CAACAAAGATTTCCGCCTCC+TGG | + | chr2.2:73395938-73395957 | MS.gene047196:CDS | 50.0% | |
CAATCGGGATTCCATGCCAA+GGG | + | chr2.2:73395322-73395341 | MS.gene047196:CDS | 50.0% | |
CAGGAGGCGGAAATCTTTGT+TGG | - | chr2.2:73395940-73395959 | None:intergenic | 50.0% | |
CCAGTAAAATTGCTAGGGCC+AGG | - | chr2.2:73395959-73395978 | None:intergenic | 50.0% | |
CCTCCATACTGCTTGTTCAC+AGG | - | chr2.2:73395002-73395021 | None:intergenic | 50.0% | |
CCTGTGAACAAGCAGTATGG+AGG | + | chr2.2:73394999-73395018 | MS.gene047196:CDS | 50.0% | |
CGACCTCCACCAGTACAATT+TGG | + | chr2.2:73395224-73395243 | MS.gene047196:CDS | 50.0% | |
CGCTTGATTGAAGTTCTGCG+AGG | - | chr2.2:73395564-73395583 | None:intergenic | 50.0% | |
CTTCTTTCTCCTTGTCCTGG+CGG | - | chr2.2:73395761-73395780 | None:intergenic | 50.0% | |
GACCCTGTGAACAAGCAGTA+TGG | + | chr2.2:73394996-73395015 | MS.gene047196:CDS | 50.0% | |
GCTGCGATGCTGAATCAAAC+CGG | - | chr2.2:73395454-73395473 | None:intergenic | 50.0% | |
GGAAACTCTGTGCCTAGTGA+AGG | + | chr2.2:73395830-73395849 | MS.gene047196:CDS | 50.0% | |
GTAAAATTGCTAGGGCCAGG+AGG | - | chr2.2:73395956-73395975 | None:intergenic | 50.0% | |
GTGGAGGAATGTGTGATGCT+TGG | - | chr2.2:73395400-73395419 | None:intergenic | 50.0% | |
GTTTCTACCATCCCTTGGCA+TGG | - | chr2.2:73395336-73395355 | None:intergenic | 50.0% | |
TATCCACCACAGCAGAGCTT+TGG | + | chr2.2:73395632-73395651 | MS.gene047196:CDS | 50.0% | |
TATGCGCCACAGCAGAACTT+TGG | + | chr2.2:73395785-73395804 | MS.gene047196:CDS | 50.0% | |
TCGCTTTCGGTCCCAATTAC+CGG | + | chr2.2:73394083-73394102 | MS.gene047196:CDS | 50.0% | |
TGTGCCTAGTGAAGGTGGAT+GGG | + | chr2.2:73395838-73395857 | MS.gene047196:CDS | 50.0% | |
TGTTTGGGTGGATACCCTTG+TGG | - | chr2.2:73395509-73395528 | None:intergenic | 50.0% | |
TTCTTTCTCCTTGTCCTGGC+GGG | - | chr2.2:73395760-73395779 | None:intergenic | 50.0% | |
TTTCCTCTTTCTCCCTGTCC+CGG | - | chr2.2:73395815-73395834 | None:intergenic | 50.0% | |
! | AATTGTACTGGTGGAGGTCG+AGG | - | chr2.2:73395224-73395243 | None:intergenic | 50.0% |
! | ATGGTGTCAGGACCAATCTC+AGG | - | chr2.2:73394236-73394255 | None:intergenic | 50.0% |
! | ATTGTACTGGTGGAGGTCGA+GGG | - | chr2.2:73395223-73395242 | None:intergenic | 50.0% |
! | CCTGGCCCTAGCAATTTTAC+TGG | + | chr2.2:73395956-73395975 | MS.gene047196:CDS | 50.0% |
! | CTCCCAAATTGTACTGGTGG+AGG | - | chr2.2:73395230-73395249 | None:intergenic | 50.0% |
! | GCTTGATCATAGCTCTGCTG+GGG | - | chr2.2:73395485-73395504 | None:intergenic | 50.0% |
! | GCTTGGCCATAGTTCTGTTG+AGG | - | chr2.2:73395383-73395402 | None:intergenic | 50.0% |
! | GTGCTTGATCATAGCTCTGC+TGG | - | chr2.2:73395487-73395506 | None:intergenic | 50.0% |
! | TGCTTTTCGACAGGTTTGCC+CGG | + | chr2.2:73394942-73394961 | MS.gene047196:intron | 50.0% |
! | TGGCCATAGTTCTGTTGAGG+TGG | - | chr2.2:73395380-73395399 | None:intergenic | 50.0% |
AAATTGCTAGGGCCAGGAGG+CGG | - | chr2.2:73395953-73395972 | None:intergenic | 55.0% | |
AACTTTGGACCACCGGGACA+GGG | + | chr2.2:73395800-73395819 | MS.gene047196:CDS | 55.0% | |
AGAGTGATCTCAGGCTACGG+CGG | - | chr2.2:73394028-73394047 | None:intergenic | 55.0% | |
ATGCGCCACGGCAGAACTTT+GGG | + | chr2.2:73395684-73395703 | MS.gene047196:CDS | 55.0% | |
CAGCAGAACTTTGGACCACC+GGG | + | chr2.2:73395794-73395813 | MS.gene047196:CDS | 55.0% | |
CAGTAGCTGAGAAGGAGTGG+TGG | - | chr2.2:73394058-73394077 | None:intergenic | 55.0% | |
CCTGACACCATCCTCTTCGA+AGG | + | chr2.2:73394245-73394264 | MS.gene047196:CDS | 55.0% | |
CCTTCGAAGAGGATGGTGTC+AGG | - | chr2.2:73394248-73394267 | None:intergenic | 55.0% | |
CGAAGTCGCAGTAGCTGAGA+AGG | - | chr2.2:73394066-73394085 | None:intergenic | 55.0% | |
CGGAGAGTGATCTCAGGCTA+CGG | - | chr2.2:73394031-73394050 | None:intergenic | 55.0% | |
CGTAGCCTGAGATCACTCTC+CGG | + | chr2.2:73394029-73394048 | MS.gene047196:CDS | 55.0% | |
CTGTGCCTAGTGAAGGTGGA+TGG | + | chr2.2:73395837-73395856 | MS.gene047196:CDS | 55.0% | |
CTTCTGTCTACTTCTCCCGG+TGG | - | chr2.2:73395710-73395729 | None:intergenic | 55.0% | |
CTTCTTTCTCCTTCTCCCGG+TGG | - | chr2.2:73395659-73395678 | None:intergenic | 55.0% | |
GAGGGATTCCCTCGGTTGTT+TGG | - | chr2.2:73395296-73395315 | None:intergenic | 55.0% | |
GGTGGTCCAAAGTTCTGCTG+TGG | - | chr2.2:73395794-73395813 | None:intergenic | 55.0% | |
TAGCTGAGAAGGAGTGGTGG+AGG | - | chr2.2:73394055-73394074 | None:intergenic | 55.0% | |
TATGCGCCACGGCAGAACTT+TGG | + | chr2.2:73395683-73395702 | MS.gene047196:CDS | 55.0% | |
TCGCAGTAGCTGAGAAGGAG+TGG | - | chr2.2:73394061-73394080 | None:intergenic | 55.0% | |
! | GGCGGGCCAAAATTTTGCTG+CGG | - | chr2.2:73395743-73395762 | None:intergenic | 55.0% |
! | TGATCATAGCTCTGCTGGGG+TGG | - | chr2.2:73395482-73395501 | None:intergenic | 55.0% |
!! | AATTTTGGCCCGCCAGGACA+AGG | + | chr2.2:73395749-73395768 | MS.gene047196:CDS | 55.0% |
!! | ACAGCAGAGCTTTGGACCAC+CGG | + | chr2.2:73395640-73395659 | MS.gene047196:CDS | 55.0% |
!! | CAGCAAAATTTTGGCCCGCC+AGG | + | chr2.2:73395743-73395762 | MS.gene047196:CDS | 55.0% |
!! | CTCTGCTGTGGTGGATACTG+TGG | - | chr2.2:73395629-73395648 | None:intergenic | 55.0% |
AACGCCGTCGACGACGTTTG+GGG | - | chr2.2:73394141-73394160 | None:intergenic | 60.0% | |
ACGGCAGAACTTTGGGCCAC+CGG | + | chr2.2:73395691-73395710 | MS.gene047196:CDS | 60.0% | |
CGGGATTCCATGCCAAGGGA+TGG | + | chr2.2:73395326-73395345 | MS.gene047196:CDS | 60.0% | |
CTGTGGCGAAGCAGGACCAT+AGG | - | chr2.2:73395612-73395631 | None:intergenic | 60.0% | |
GAACGCCGTCGACGACGTTT+GGG | - | chr2.2:73394142-73394161 | None:intergenic | 60.0% | |
GAACTTTGGACCACCGGGAC+AGG | + | chr2.2:73395799-73395818 | MS.gene047196:CDS | 60.0% | |
GGTCCAAAGCTCTGCTGTGG+TGG | - | chr2.2:73395638-73395657 | None:intergenic | 60.0% | |
GGTGGATACTGTGGCGAAGC+AGG | - | chr2.2:73395620-73395639 | None:intergenic | 60.0% | |
GGTGGTCCAAAGCTCTGCTG+TGG | - | chr2.2:73395641-73395660 | None:intergenic | 60.0% | |
TGAACGCCGTCGACGACGTT+TGG | - | chr2.2:73394143-73394162 | None:intergenic | 60.0% | |
! | TGAGAAGGAGTGGTGGAGGC+CGG | - | chr2.2:73394051-73394070 | None:intergenic | 60.0% |
!! | AGCTTTGGACCACCGGGAGA+AGG | + | chr2.2:73395647-73395666 | MS.gene047196:CDS | 60.0% |
!! | CAGCAGAGCTTTGGACCACC+GGG | + | chr2.2:73395641-73395660 | MS.gene047196:CDS | 60.0% |
CCACCGGGACAGGGAGAAAG+AGG | + | chr2.2:73395809-73395828 | MS.gene047196:CDS | 65.0% | |
CCTCTTTCTCCCTGTCCCGG+TGG | - | chr2.2:73395812-73395831 | None:intergenic | 65.0% | |
CGGCAGAACTTTGGGCCACC+GGG | + | chr2.2:73395692-73395711 | MS.gene047196:CDS | 65.0% | |
GGAGGCCGGAGAGTGATCTC+AGG | - | chr2.2:73394037-73394056 | None:intergenic | 65.0% | |
GGTGGCCCAAAGTTCTGCCG+TGG | - | chr2.2:73395692-73395711 | None:intergenic | 65.0% | |
GTGATCTCAGGCTACGGCGG+AGG | - | chr2.2:73394025-73394044 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.2 | gene | 73394002 | 73396172 | 73394002 | ID=MS.gene047196 |
chr2.2 | mRNA | 73394002 | 73396172 | 73394002 | ID=MS.gene047196.t1;Parent=MS.gene047196 |
chr2.2 | exon | 73394002 | 73394381 | 73394002 | ID=MS.gene047196.t1.exon1;Parent=MS.gene047196.t1 |
chr2.2 | CDS | 73394002 | 73394381 | 73394002 | ID=cds.MS.gene047196.t1;Parent=MS.gene047196.t1 |
chr2.2 | exon | 73394480 | 73394577 | 73394480 | ID=MS.gene047196.t1.exon2;Parent=MS.gene047196.t1 |
chr2.2 | CDS | 73394480 | 73394577 | 73394480 | ID=cds.MS.gene047196.t1;Parent=MS.gene047196.t1 |
chr2.2 | exon | 73394955 | 73395020 | 73394955 | ID=MS.gene047196.t1.exon3;Parent=MS.gene047196.t1 |
chr2.2 | CDS | 73394955 | 73395020 | 73394955 | ID=cds.MS.gene047196.t1;Parent=MS.gene047196.t1 |
chr2.2 | exon | 73395192 | 73395982 | 73395192 | ID=MS.gene047196.t1.exon4;Parent=MS.gene047196.t1 |
chr2.2 | CDS | 73395192 | 73395982 | 73395192 | ID=cds.MS.gene047196.t1;Parent=MS.gene047196.t1 |
chr2.2 | exon | 73396161 | 73396172 | 73396161 | ID=MS.gene047196.t1.exon5;Parent=MS.gene047196.t1 |
chr2.2 | CDS | 73396161 | 73396172 | 73396161 | ID=cds.MS.gene047196.t1;Parent=MS.gene047196.t1 |
Gene Sequence |
Protein sequence |