Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene04722.t1 | XP_013449722.1 | 97.7 | 639 | 15 | 0 | 1 | 639 | 1 | 639 | 0.00E+00 | 1248.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene04722.t1 | F4J0W4 | 59.5 | 632 | 256 | 0 | 6 | 637 | 12 | 643 | 6.2e-226 | 785.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene04722.t1 | A0A072UD33 | 97.7 | 639 | 15 | 0 | 1 | 639 | 1 | 639 | 0.0e+00 | 1248.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene005228 | MS.gene04722 | PPI |
| MS.gene056037 | MS.gene04722 | PPI |
| MS.gene44096 | MS.gene04722 | PPI |
| MS.gene055574 | MS.gene04722 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene04722.t1 | MTR_7g094810 | 97.653 | 639 | 15 | 0 | 1 | 639 | 1 | 639 | 0.0 | 1293 |
| MS.gene04722.t1 | MTR_7g094810 | 97.045 | 643 | 15 | 1 | 1 | 639 | 1 | 643 | 0.0 | 1287 |
| MS.gene04722.t1 | MTR_7g094810 | 97.834 | 554 | 12 | 0 | 1 | 554 | 1 | 554 | 0.0 | 1124 |
| MS.gene04722.t1 | MTR_7g094810 | 97.133 | 558 | 12 | 1 | 1 | 554 | 1 | 558 | 0.0 | 1119 |
| MS.gene04722.t1 | MTR_7g094810 | 97.634 | 465 | 11 | 0 | 1 | 465 | 1 | 465 | 0.0 | 944 |
| MS.gene04722.t1 | MTR_1g072280 | 68.254 | 630 | 198 | 2 | 9 | 638 | 13 | 640 | 0.0 | 874 |
| MS.gene04722.t1 | MTR_1g082870 | 57.571 | 634 | 268 | 1 | 6 | 639 | 14 | 646 | 0.0 | 780 |
| MS.gene04722.t1 | MTR_5g034580 | 52.215 | 632 | 281 | 5 | 7 | 637 | 9 | 620 | 0.0 | 672 |
| MS.gene04722.t1 | MTR_5g040690 | 51.974 | 608 | 289 | 2 | 6 | 613 | 15 | 619 | 0.0 | 659 |
| MS.gene04722.t1 | MTR_4g129890 | 47.937 | 630 | 319 | 4 | 7 | 630 | 18 | 644 | 0.0 | 607 |
| MS.gene04722.t1 | MTR_5g034140 | 52.838 | 458 | 211 | 2 | 165 | 622 | 13 | 465 | 5.94e-170 | 495 |
| MS.gene04722.t1 | MTR_4g129310 | 44.260 | 601 | 284 | 4 | 17 | 585 | 29 | 610 | 1.21e-164 | 485 |
| MS.gene04722.t1 | MTR_5g034660 | 45.697 | 337 | 155 | 1 | 303 | 639 | 12 | 320 | 2.31e-93 | 291 |
| MS.gene04722.t1 | MTR_4g123543 | 44.253 | 174 | 71 | 4 | 480 | 629 | 4 | 175 | 4.15e-41 | 147 |
| MS.gene04722.t1 | MTR_8g010670 | 35.117 | 299 | 156 | 8 | 8 | 287 | 33 | 312 | 1.97e-39 | 152 |
| MS.gene04722.t1 | MTR_4g073250 | 29.143 | 175 | 114 | 3 | 9 | 174 | 7 | 180 | 4.05e-14 | 72.0 |
| MS.gene04722.t1 | MTR_3g078260 | 28.959 | 221 | 127 | 6 | 1 | 205 | 1 | 207 | 1.61e-13 | 70.5 |
| MS.gene04722.t1 | MTR_8g075240 | 28.652 | 178 | 107 | 3 | 9 | 172 | 7 | 178 | 3.59e-13 | 68.9 |
| MS.gene04722.t1 | MTR_5g022600 | 28.652 | 178 | 107 | 3 | 9 | 172 | 7 | 178 | 4.52e-13 | 68.9 |
| MS.gene04722.t1 | MTR_2g090875 | 28.324 | 173 | 114 | 3 | 9 | 172 | 7 | 178 | 7.84e-13 | 68.2 |
| MS.gene04722.t1 | MTR_4g088055 | 27.746 | 173 | 115 | 3 | 9 | 172 | 7 | 178 | 2.26e-12 | 66.6 |
| MS.gene04722.t1 | MTR_6g087980 | 28.000 | 175 | 116 | 3 | 9 | 174 | 7 | 180 | 7.38e-12 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene04722.t1 | AT3G63150 | 59.494 | 632 | 256 | 0 | 6 | 637 | 12 | 643 | 0.0 | 803 |
| MS.gene04722.t1 | AT5G27540 | 57.188 | 633 | 269 | 2 | 8 | 639 | 17 | 648 | 0.0 | 737 |
| MS.gene04722.t1 | AT5G27540 | 57.188 | 633 | 269 | 2 | 8 | 639 | 17 | 648 | 0.0 | 737 |
| MS.gene04722.t1 | AT3G05310 | 47.253 | 637 | 325 | 6 | 9 | 637 | 15 | 648 | 0.0 | 597 |
| MS.gene04722.t1 | AT3G05310 | 48.419 | 506 | 250 | 6 | 140 | 637 | 1 | 503 | 4.17e-167 | 487 |
| MS.gene04722.t1 | AT3G05310 | 48.871 | 487 | 237 | 7 | 140 | 615 | 1 | 486 | 1.13e-158 | 466 |
| MS.gene04722.t1 | AT4G35020 | 30.286 | 175 | 112 | 3 | 9 | 174 | 7 | 180 | 6.18e-15 | 74.3 |
| MS.gene04722.t1 | AT4G35020 | 30.286 | 175 | 112 | 3 | 9 | 174 | 7 | 180 | 6.18e-15 | 74.3 |
| MS.gene04722.t1 | AT4G35020 | 30.286 | 175 | 112 | 3 | 9 | 174 | 7 | 180 | 6.18e-15 | 74.3 |
| MS.gene04722.t1 | AT1G20090 | 29.480 | 173 | 112 | 3 | 9 | 172 | 6 | 177 | 1.13e-13 | 70.5 |
| MS.gene04722.t1 | AT4G28950 | 28.324 | 173 | 116 | 3 | 9 | 174 | 7 | 178 | 3.45e-13 | 69.7 |
| MS.gene04722.t1 | AT2G44690 | 29.143 | 175 | 114 | 3 | 9 | 174 | 19 | 192 | 7.65e-13 | 68.6 |
| MS.gene04722.t1 | AT3G51300 | 29.213 | 178 | 106 | 3 | 9 | 172 | 7 | 178 | 9.21e-13 | 68.2 |
| MS.gene04722.t1 | AT1G75840 | 28.902 | 173 | 113 | 3 | 9 | 172 | 7 | 178 | 1.06e-12 | 67.8 |
| MS.gene04722.t1 | AT2G17800 | 28.090 | 178 | 108 | 3 | 9 | 172 | 7 | 178 | 1.55e-12 | 67.4 |
| MS.gene04722.t1 | AT2G17800 | 28.090 | 178 | 108 | 3 | 9 | 172 | 7 | 178 | 1.55e-12 | 67.4 |
| MS.gene04722.t1 | AT4G35950 | 27.528 | 178 | 109 | 3 | 9 | 172 | 7 | 178 | 2.21e-12 | 67.0 |
| MS.gene04722.t1 | AT3G48040 | 27.128 | 188 | 117 | 3 | 1 | 174 | 1 | 182 | 3.56e-12 | 66.6 |
| MS.gene04722.t1 | AT5G62880 | 26.630 | 184 | 125 | 3 | 1 | 175 | 1 | 183 | 4.21e-12 | 66.6 |
| MS.gene04722.t1 | AT5G45970 | 25.862 | 174 | 119 | 3 | 9 | 173 | 7 | 179 | 1.70e-11 | 64.3 |
Find 143 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTTCCCAATCTCAGTTTC+TGG | 0.127977 | 7.1:+13142487 | None:intergenic |
| TACAAGTTCACACACCTTTC+TGG | 0.158890 | 7.1:+13147851 | None:intergenic |
| TGCTCTGTTGGATGCATTAT+TGG | 0.173185 | 7.1:-13144939 | MS.gene04722:CDS |
| GCAAATGCCATTGAATTAAT+AGG | 0.209265 | 7.1:-13144730 | MS.gene04722:CDS |
| AGGGGAATCCGGAGACATTT+TGG | 0.211616 | 7.1:-13148916 | MS.gene04722:CDS |
| AAATGGCATCTTTAGACTAT+TGG | 0.212196 | 7.1:-13148070 | MS.gene04722:CDS |
| TCTGTCAAATCAGGATTATT+TGG | 0.225912 | 7.1:-13144451 | MS.gene04722:CDS |
| ATCAAAATTTCTGTCAAATC+AGG | 0.290043 | 7.1:-13144460 | MS.gene04722:CDS |
| TCTTGCACTGCCCTTGGATA+TGG | 0.301508 | 7.1:+13142742 | None:intergenic |
| CTTCGCGATTGAGTTCTTAC+TGG | 0.317289 | 7.1:-13150741 | MS.gene04722:CDS |
| ATCATTAGTACATACTTTAT+CGG | 0.318841 | 7.1:+13148044 | None:intergenic |
| CAAATGCCATTGAATTAATA+GGG | 0.324246 | 7.1:-13144729 | MS.gene04722:CDS |
| CAACATTCTTGAACTCTTGT+AGG | 0.325048 | 7.1:+13149873 | None:intergenic |
| AATTTCATGCTTACGTGAAT+AGG | 0.325868 | 7.1:+13142574 | None:intergenic |
| CTTTAACAGATAAATGTGTT+AGG | 0.335032 | 7.1:-13149274 | MS.gene04722:CDS |
| TACGGTAATGGGAACATAAT+CGG | 0.355153 | 7.1:+13151119 | None:intergenic |
| TTGCAACCAACCACAATTAC+AGG | 0.361345 | 7.1:+13149953 | None:intergenic |
| CTAGGAAAACTCTTGTATTA+CGG | 0.370007 | 7.1:-13144503 | MS.gene04722:CDS |
| ATTCACGTAAGCATGAAATT+AGG | 0.372157 | 7.1:-13142571 | MS.gene04722:CDS |
| GCTCTGTTGGATGCATTATT+GGG | 0.374557 | 7.1:-13144938 | MS.gene04722:CDS |
| TAGGAAAACTCTTGTATTAC+GGG | 0.386584 | 7.1:-13144502 | MS.gene04722:CDS |
| CTCTCAGTAACATCGTTATA+TGG | 0.389773 | 7.1:+13145267 | None:intergenic |
| GCAAACTTCTCAACTGTTGT+TGG | 0.393087 | 7.1:+13144754 | None:intergenic |
| GAAGCTGTAGAGTTTCTAAA+TGG | 0.397821 | 7.1:-13148087 | MS.gene04722:CDS |
| TACATAGGTTACTCAGGAGT+TGG | 0.398731 | 7.1:-13142608 | MS.gene04722:intron |
| CCATGTGAGTTGATTCCTTC+CGG | 0.399031 | 7.1:+13148986 | None:intergenic |
| GATTTGCTTGAGAAGGTTGC+TGG | 0.399403 | 7.1:-13142829 | MS.gene04722:CDS |
| CCTAGAGGATGTGTCGATTA+CGG | 0.399768 | 7.1:+13151101 | None:intergenic |
| ATCCAACAGAGCAGATTTAC+CGG | 0.402899 | 7.1:+13144949 | None:intergenic |
| TTGCCTCCTTATTGCTGCTA+AGG | 0.403808 | 7.1:-13142776 | MS.gene04722:CDS |
| CATAACATGTTCTTAAGAAA+GGG | 0.404305 | 7.1:-13148935 | MS.gene04722:CDS |
| AGCATTCCAGAAACTGAGAT+TGG | 0.405812 | 7.1:-13142493 | MS.gene04722:CDS |
| ACGGTAATGGGAACATAATC+GGG | 0.409061 | 7.1:+13151120 | None:intergenic |
| TGATCAGGAGCTGTCTTAGA+TGG | 0.411417 | 7.1:+13148830 | None:intergenic |
| GGGACAGCTATGGCAGTTGT+TGG | 0.411657 | 7.1:-13142264 | MS.gene04722:CDS |
| TAAGTAAGTATAACCTGATC+AGG | 0.417700 | 7.1:+13148815 | None:intergenic |
| AGCTATGGCAGTTGTTGGCT+TGG | 0.421010 | 7.1:-13142259 | MS.gene04722:CDS |
| GGATGTGTCGATTACGGTAA+TGG | 0.427390 | 7.1:+13151107 | None:intergenic |
| GGAGTATAATTATTTGAGAA+AGG | 0.432166 | 7.1:+13144775 | None:intergenic |
| GACGTTCTAAGCTCACTTGT+TGG | 0.435400 | 7.1:+13149909 | None:intergenic |
| TGATCAAACAATGGTTCTAC+TGG | 0.436894 | 7.1:+13149308 | None:intergenic |
| AAGAGAGTAGGCGGAAGAAC+GGG | 0.438407 | 7.1:+13151159 | None:intergenic |
| TACTCAGGAGTTGGGAATAG+AGG | 0.445375 | 7.1:-13142599 | MS.gene04722:CDS |
| GTGGATCAAGTAATGTCATA+AGG | 0.445474 | 7.1:+13145119 | None:intergenic |
| GATCATCCTTAGCAGCAATA+AGG | 0.447279 | 7.1:+13142770 | None:intergenic |
| ACGGGTTACATGTCTCTTAA+CGG | 0.448919 | 7.1:-13145237 | MS.gene04722:CDS |
| AGAACGGGAAGAACCGTATC+GGG | 0.450309 | 7.1:+13151174 | None:intergenic |
| ACATAGGTTACTCAGGAGTT+GGG | 0.451202 | 7.1:-13142607 | MS.gene04722:intron |
| TGGGCTGTGTTAAGATACTT+TGG | 0.451725 | 7.1:-13148896 | MS.gene04722:CDS |
| ACATAACATGTTCTTAAGAA+AGG | 0.454329 | 7.1:-13148936 | MS.gene04722:CDS |
| ACTGAATCTTGCACTGCCCT+TGG | 0.458417 | 7.1:+13142736 | None:intergenic |
| GTTCTTAAGAAAGGGGAATC+CGG | 0.459626 | 7.1:-13148927 | MS.gene04722:CDS |
| ATCAAATTTGCCAGGCTACA+TGG | 0.460279 | 7.1:+13145097 | None:intergenic |
| ATCTAAGACAGCTCCTGATC+AGG | 0.462097 | 7.1:-13148828 | MS.gene04722:intron |
| AACCTTCTCAAGCAAATCTC+TGG | 0.467529 | 7.1:+13142834 | None:intergenic |
| TTTAACAGATAAATGTGTTA+GGG | 0.468424 | 7.1:-13149273 | MS.gene04722:CDS |
| GCTGGGCAAGGTGATCTAAC+TGG | 0.472101 | 7.1:-13142811 | MS.gene04722:CDS |
| AATAGCTTGTCCACTTCGGC+GGG | 0.477295 | 7.1:+13147884 | None:intergenic |
| GTCGCCGGTGACCGCGGCAC+CGG | 0.477326 | 7.1:-13151237 | MS.gene04722:CDS |
| CTCTGCAGCGACACTATACC+AGG | 0.478266 | 7.1:-13149834 | MS.gene04722:intron |
| GGAGCTGTCTTAGATGGAAC+AGG | 0.482805 | 7.1:+13148836 | None:intergenic |
| GGCAGCCTGCCGTGCATATG+CGG | 0.487127 | 7.1:-13142238 | MS.gene04722:CDS |
| ACTTAGTTCTGCATCATTGA+GGG | 0.488839 | 7.1:+13149205 | None:intergenic |
| TGCCGGTAAATCTGCTCTGT+TGG | 0.491279 | 7.1:-13144951 | MS.gene04722:CDS |
| GATGTGTCGATTACGGTAAT+GGG | 0.491822 | 7.1:+13151108 | None:intergenic |
| GTTTCGCGAACTACAGAAGT+TGG | 0.499373 | 7.1:-13150719 | MS.gene04722:CDS |
| ATCCAGAGATTTGCTTGAGA+AGG | 0.503101 | 7.1:-13142836 | MS.gene04722:CDS |
| CACTTAGTTCTGCATCATTG+AGG | 0.503915 | 7.1:+13149204 | None:intergenic |
| CGATGTAAATCAAATTTGCC+AGG | 0.507019 | 7.1:+13145089 | None:intergenic |
| ACTCACCCCTATTAATTCAA+TGG | 0.509060 | 7.1:+13144723 | None:intergenic |
| AGAAAAGAAAGCATTACAAT+CGG | 0.509617 | 7.1:-13142468 | MS.gene04722:CDS |
| CTTGAGAAGGTTGCTGGGCA+AGG | 0.510718 | 7.1:-13142823 | MS.gene04722:CDS |
| CCAGCTCAGATGAATATTCG+TGG | 0.512064 | 7.1:-13142864 | MS.gene04722:intron |
| CTTCACCGCATATGCACGGC+AGG | 0.513290 | 7.1:+13142233 | None:intergenic |
| TGTCAAAACAGTTGTACAGC+AGG | 0.513674 | 7.1:-13149014 | MS.gene04722:CDS |
| CGCTGCAGAGCATTCAATGC+AGG | 0.514680 | 7.1:+13149847 | None:intergenic |
| ATGTTATCCCCACCTGGGAT+AGG | 0.515462 | 7.1:+13145211 | None:intergenic |
| ACTTGATCCACCATGTAGCC+TGG | 0.519763 | 7.1:-13145107 | MS.gene04722:CDS |
| GCATTCCAGAAACTGAGATT+GGG | 0.520843 | 7.1:-13142492 | MS.gene04722:CDS |
| CAAGAGAGTAGGCGGAAGAA+CGG | 0.524523 | 7.1:+13151158 | None:intergenic |
| TGTTACTGAGAGAACTGATA+CGG | 0.525778 | 7.1:-13145256 | MS.gene04722:CDS |
| CTGGCAAATTTGATTTACAT+CGG | 0.532263 | 7.1:-13145088 | MS.gene04722:CDS |
| GCAGTTCGAGTCGTCGTCGC+CGG | 0.533042 | 7.1:-13151252 | MS.gene04722:CDS |
| TGATAATGATTTAAAACTCA+AGG | 0.533922 | 7.1:-13148870 | MS.gene04722:CDS |
| AGTTGTACAGCAGGATGTAC+CGG | 0.536158 | 7.1:-13149005 | MS.gene04722:CDS |
| GTTTCTGGAATGCTCAAATG+AGG | 0.536826 | 7.1:+13142502 | None:intergenic |
| GTCGGAGTCATTCCCCGATA+CGG | 0.539145 | 7.1:-13151187 | MS.gene04722:CDS |
| AACACAGCCCAAAATGTCTC+CGG | 0.540157 | 7.1:+13148908 | None:intergenic |
| TAAATGTTTCAATGCACCAT+TGG | 0.546345 | 7.1:-13149056 | MS.gene04722:CDS |
| AAATAGCTTGTCCACTTCGG+CGG | 0.550017 | 7.1:+13147883 | None:intergenic |
| AGCCCTAAAACCCGCCGAAG+TGG | 0.553333 | 7.1:-13147894 | MS.gene04722:CDS |
| TCACTACTATATAGGGAACT+AGG | 0.556000 | 7.1:-13144521 | MS.gene04722:intron |
| TGGATCAAGTAATGTCATAA+GGG | 0.557134 | 7.1:+13145120 | None:intergenic |
| ATTTGCTTGAGAAGGTTGCT+GGG | 0.560141 | 7.1:-13142828 | MS.gene04722:CDS |
| ACAAAATAGCTTGTCCACTT+CGG | 0.560250 | 7.1:+13147880 | None:intergenic |
| TTACAGAGTGTGGAGCTGAC+AGG | 0.561714 | 7.1:-13148111 | MS.gene04722:intron |
| GTCGTCGTCGCCGGTGACCG+CGG | 0.565527 | 7.1:-13151243 | MS.gene04722:CDS |
| TGTTGGATGCATTATTGGGA+AGG | 0.569658 | 7.1:-13144934 | MS.gene04722:intron |
| GCAAGAAACAAACGACAGAA+AGG | 0.574584 | 7.1:-13145009 | MS.gene04722:CDS |
| TCGCGAACTACAGAAGTTGG+AGG | 0.576286 | 7.1:-13150716 | MS.gene04722:intron |
| ATGATCTAACTCCATATCCA+AGG | 0.576645 | 7.1:-13142753 | MS.gene04722:CDS |
| TCTTCTTCACCGCATATGCA+CGG | 0.587539 | 7.1:+13142229 | None:intergenic |
| TTGATTTACATCGGATATAG+CGG | 0.589570 | 7.1:-13145079 | MS.gene04722:CDS |
| TAATCAGCGGGCAAGAGAGT+AGG | 0.590271 | 7.1:+13151147 | None:intergenic |
| ATTTACAGTTGGGACAGCTA+TGG | 0.591477 | 7.1:-13142274 | MS.gene04722:intron |
| TAATCGGGGAAATAATCAGC+GGG | 0.592090 | 7.1:+13151135 | None:intergenic |
| TGACTTTCATGATCAAACAA+TGG | 0.594216 | 7.1:+13149299 | None:intergenic |
| GCTATTTGAGGTAACTCCAA+TGG | 0.596574 | 7.1:+13149040 | None:intergenic |
| GACTCGAACTGCATTTCGAT+CGG | 0.596600 | 7.1:+13151263 | None:intergenic |
| TTATATGGAGCATCATTCCA+TGG | 0.597123 | 7.1:+13145282 | None:intergenic |
| GGTAACGGTACCTGTAATTG+TGG | 0.599004 | 7.1:-13149963 | MS.gene04722:CDS |
| ACGGTACCTGTAATTGTGGT+TGG | 0.601075 | 7.1:-13149959 | MS.gene04722:CDS |
| TGTTCTTTGTGACCGTGACA+TGG | 0.602570 | 7.1:-13149234 | MS.gene04722:CDS |
| TCTTAACGGATTCCTATCCC+AGG | 0.602973 | 7.1:-13145223 | MS.gene04722:intron |
| GTAACACGGAGTGCTGCAGC+AGG | 0.603603 | 7.1:+13145052 | None:intergenic |
| AAGAACGGGAAGAACCGTAT+CGG | 0.605574 | 7.1:+13151173 | None:intergenic |
| CCGTAATCGACACATCCTCT+AGG | 0.606964 | 7.1:-13151101 | MS.gene04722:intron |
| TGCAGAGCATTCAATGCAGG+TGG | 0.609820 | 7.1:+13149850 | None:intergenic |
| TCAGCGGGCAAGAGAGTAGG+CGG | 0.611296 | 7.1:+13151150 | None:intergenic |
| CCTCATCGCTGCCATCGCGT+CGG | 0.617131 | 7.1:-13151205 | MS.gene04722:CDS |
| ATAACATGTTCTTAAGAAAG+GGG | 0.617499 | 7.1:-13148934 | MS.gene04722:CDS |
| GGGGAATGACTCCGACGCGA+TGG | 0.624040 | 7.1:+13151194 | None:intergenic |
| AAGCGCAATGAAGAATTGAA+AGG | 0.624113 | 7.1:-13150811 | MS.gene04722:CDS |
| TTAGCAGCAATAAGGAGGCA+AGG | 0.625160 | 7.1:+13142778 | None:intergenic |
| CCGGAAGGAATCAACTCACA+TGG | 0.627523 | 7.1:-13148986 | MS.gene04722:CDS |
| TGAGGGCATCATCCATGTCA+CGG | 0.628027 | 7.1:+13149222 | None:intergenic |
| AGTGAGCTTAGAACGTCTCA+TGG | 0.628287 | 7.1:-13149903 | MS.gene04722:CDS |
| CATCCTTAGCAGCAATAAGG+AGG | 0.632991 | 7.1:+13142773 | None:intergenic |
| CTGATCTCCTACGAGTAACA+CGG | 0.641883 | 7.1:+13145038 | None:intergenic |
| AAATGCCATTGAATTAATAG+GGG | 0.644139 | 7.1:-13144728 | MS.gene04722:intron |
| CAGCACTCCGTGTTACTCGT+AGG | 0.644205 | 7.1:-13145045 | MS.gene04722:CDS |
| TTTCTGGAATGCTCAAATGA+GGG | 0.646076 | 7.1:+13142503 | None:intergenic |
| GTAAGAACTCAATCGCGAAG+AGG | 0.647403 | 7.1:+13150744 | None:intergenic |
| TGATCTAACTCCATATCCAA+GGG | 0.648802 | 7.1:-13142752 | MS.gene04722:CDS |
| GGCAGTGCAAGATTCAGTGA+AGG | 0.654639 | 7.1:-13142731 | MS.gene04722:intron |
| CCGACGCGATGGCAGCGATG+AGG | 0.658325 | 7.1:+13151205 | None:intergenic |
| GTTACTGAGAGAACTGATAC+GGG | 0.665228 | 7.1:-13145255 | MS.gene04722:CDS |
| GAACGGGAAGAACCGTATCG+GGG | 0.666195 | 7.1:+13151175 | None:intergenic |
| CGGTAATGGGAACATAATCG+GGG | 0.669832 | 7.1:+13151121 | None:intergenic |
| CTGTCTTAGATGGAACAGGA+AGG | 0.680074 | 7.1:+13148840 | None:intergenic |
| GTACAGCAGGATGTACCGGA+AGG | 0.683079 | 7.1:-13149001 | MS.gene04722:CDS |
| AAATTTGCCAGGCTACATGG+TGG | 0.705689 | 7.1:+13145100 | None:intergenic |
| ATAATCGGGGAAATAATCAG+CGG | 0.709329 | 7.1:+13151134 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 13142215 | 13151295 | 13142215 | ID=MS.gene04722 |
| chr7.1 | mRNA | 13142215 | 13151295 | 13142215 | ID=MS.gene04722.t1;Parent=MS.gene04722 |
| chr7.1 | exon | 13151102 | 13151295 | 13151102 | ID=MS.gene04722.t1.exon1;Parent=MS.gene04722.t1 |
| chr7.1 | CDS | 13151102 | 13151295 | 13151102 | ID=cds.MS.gene04722.t1;Parent=MS.gene04722.t1 |
| chr7.1 | exon | 13150717 | 13150849 | 13150717 | ID=MS.gene04722.t1.exon2;Parent=MS.gene04722.t1 |
| chr7.1 | CDS | 13150717 | 13150849 | 13150717 | ID=cds.MS.gene04722.t1;Parent=MS.gene04722.t1 |
| chr7.1 | exon | 13149835 | 13149984 | 13149835 | ID=MS.gene04722.t1.exon3;Parent=MS.gene04722.t1 |
| chr7.1 | CDS | 13149835 | 13149984 | 13149835 | ID=cds.MS.gene04722.t1;Parent=MS.gene04722.t1 |
| chr7.1 | exon | 13149196 | 13149372 | 13149196 | ID=MS.gene04722.t1.exon4;Parent=MS.gene04722.t1 |
| chr7.1 | CDS | 13149196 | 13149372 | 13149196 | ID=cds.MS.gene04722.t1;Parent=MS.gene04722.t1 |
| chr7.1 | exon | 13148829 | 13149080 | 13148829 | ID=MS.gene04722.t1.exon5;Parent=MS.gene04722.t1 |
| chr7.1 | CDS | 13148829 | 13149080 | 13148829 | ID=cds.MS.gene04722.t1;Parent=MS.gene04722.t1 |
| chr7.1 | exon | 13148059 | 13148127 | 13148059 | ID=MS.gene04722.t1.exon6;Parent=MS.gene04722.t1 |
| chr7.1 | CDS | 13148059 | 13148127 | 13148059 | ID=cds.MS.gene04722.t1;Parent=MS.gene04722.t1 |
| chr7.1 | exon | 13147866 | 13147921 | 13147866 | ID=MS.gene04722.t1.exon7;Parent=MS.gene04722.t1 |
| chr7.1 | CDS | 13147866 | 13147921 | 13147866 | ID=cds.MS.gene04722.t1;Parent=MS.gene04722.t1 |
| chr7.1 | exon | 13145224 | 13145305 | 13145224 | ID=MS.gene04722.t1.exon8;Parent=MS.gene04722.t1 |
| chr7.1 | CDS | 13145224 | 13145305 | 13145224 | ID=cds.MS.gene04722.t1;Parent=MS.gene04722.t1 |
| chr7.1 | exon | 13144935 | 13145146 | 13144935 | ID=MS.gene04722.t1.exon9;Parent=MS.gene04722.t1 |
| chr7.1 | CDS | 13144935 | 13145146 | 13144935 | ID=cds.MS.gene04722.t1;Parent=MS.gene04722.t1 |
| chr7.1 | exon | 13144729 | 13144798 | 13144729 | ID=MS.gene04722.t1.exon10;Parent=MS.gene04722.t1 |
| chr7.1 | CDS | 13144729 | 13144798 | 13144729 | ID=cds.MS.gene04722.t1;Parent=MS.gene04722.t1 |
| chr7.1 | exon | 13144417 | 13144529 | 13144417 | ID=MS.gene04722.t1.exon11;Parent=MS.gene04722.t1 |
| chr7.1 | CDS | 13144417 | 13144529 | 13144417 | ID=cds.MS.gene04722.t1;Parent=MS.gene04722.t1 |
| chr7.1 | exon | 13142732 | 13142882 | 13142732 | ID=MS.gene04722.t1.exon12;Parent=MS.gene04722.t1 |
| chr7.1 | CDS | 13142732 | 13142882 | 13142732 | ID=cds.MS.gene04722.t1;Parent=MS.gene04722.t1 |
| chr7.1 | exon | 13142437 | 13142623 | 13142437 | ID=MS.gene04722.t1.exon13;Parent=MS.gene04722.t1 |
| chr7.1 | CDS | 13142437 | 13142623 | 13142437 | ID=cds.MS.gene04722.t1;Parent=MS.gene04722.t1 |
| chr7.1 | exon | 13142215 | 13142288 | 13142215 | ID=MS.gene04722.t1.exon14;Parent=MS.gene04722.t1 |
| chr7.1 | CDS | 13142215 | 13142288 | 13142215 | ID=cds.MS.gene04722.t1;Parent=MS.gene04722.t1 |
| Gene Sequence |
| Protein sequence |