AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene047576

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene047576.t1 MTR_2g013490 99.051 316 3 0 1 316 1 316 0.0 642
MS.gene047576.t1 MTR_4g078640 33.054 239 138 7 1 230 1 226 2.82e-33 130
MS.gene047576.t1 MTR_4g070380 33.333 225 131 6 12 230 15 226 2.06e-32 127
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene047576.t1 AT5G01230 92.508 307 22 1 1 306 1 307 0.0 586
MS.gene047576.t1 AT5G01230 100.000 57 0 0 1 57 1 57 5.56e-35 122
MS.gene047576.t1 AT4G25730 34.167 240 134 8 1 231 1 225 2.19e-34 133

Find 89 sgRNAs with CRISPR-Local

Find 324 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATGGGATATACACCTTATT+AGG 0.161234 2.1:-71371144 None:intergenic
AGAAGCCGATGAAGATCTTT+TGG 0.261957 2.1:-71370787 None:intergenic
CTAGCTTGCGGGGACCTTAC+TGG 0.280561 2.1:+71371168 MS.gene047576:CDS
TTCATTGCGAAGATATTTAG+AGG 0.318467 2.1:+71369636 MS.gene047576:CDS
ATATCCCATTTCTAGCTTGC+GGG 0.337528 2.1:+71371157 MS.gene047576:CDS
AACTCTAGAGCTCTCTTGTA+AGG 0.363418 2.1:-71371279 None:intergenic
TGCTCCAGGCAGCTGGAGTC+AGG 0.367296 2.1:+71366678 MS.gene047576:CDS
GCATCAGGTGCAAGCTTGGC+TGG 0.374216 2.1:-71367641 None:intergenic
GCAAAGCTTCAAGGGATAAG+AGG 0.379131 2.1:+71366241 MS.gene047576:CDS
CTTTGCATCAGGTGCAAGCT+TGG 0.398733 2.1:-71367645 None:intergenic
TATCCACTGCCTAAAGTTGC+TGG 0.400318 2.1:+71371210 MS.gene047576:CDS
CAAATACCTGACAGTATAGA+AGG 0.404894 2.1:-71369671 None:intergenic
AGGTCCCCGCAAGCTAGAAA+TGG 0.414251 2.1:-71371162 None:intergenic
GAGAAGGTTGGAAGTCCATC+AGG 0.420443 2.1:+71370811 MS.gene047576:CDS
ACTAAAGTTCTTACCTATGC+TGG 0.426966 2.1:-71370373 None:intergenic
CAGCCAATGGCTCCGATTGA+AGG 0.431915 2.1:+71368144 MS.gene047576:CDS
ATGGGATATACACCTTATTA+GGG 0.432233 2.1:-71371143 None:intergenic
TGGAAAACTTACTTTGCATC+AGG 0.444078 2.1:-71367656 None:intergenic
AAATCAATAGCTACAATAAG+AGG 0.445424 2.1:-71368120 None:intergenic
TATGTGCTGCTCCAGGCAGC+TGG 0.452462 2.1:+71366671 MS.gene047576:CDS
TGCTTACTGCAAGTATGAGT+TGG 0.458021 2.1:-71369235 None:intergenic
AAACCATGGGCAAAGCTTCA+AGG 0.459913 2.1:+71366232 None:intergenic
GAGTTTGCAGATTGTGTTAG+TGG 0.463559 2.1:+71371108 MS.gene047576:intron
CATCGGCTTCTTGAGAAGGT+TGG 0.470461 2.1:+71370799 MS.gene047576:CDS
TTCATCCATGTCATGAAGTC+CGG 0.472049 2.1:-71369201 None:intergenic
TTACTGGATATGATTCTGAT+AGG 0.474435 2.1:+71371184 MS.gene047576:CDS
ATCCCTTGAAGCTTTGCCCA+TGG 0.475121 2.1:-71366235 None:intergenic
GCTTACTGCAAGTATGAGTT+GGG 0.475427 2.1:-71369234 None:intergenic
TGAAGGTGTTATCCAGGTGC+AGG 0.479392 2.1:+71368161 MS.gene047576:CDS
GGCTTTGCAAAAGTCACCAC+AGG 0.483167 2.1:-71370333 None:intergenic
ATCCACTGCCTAAAGTTGCT+GGG 0.488195 2.1:+71371211 MS.gene047576:CDS
CCATCAGGGGTAGATGATAC+AGG 0.496409 2.1:+71370826 MS.gene047576:CDS
AGCTATTGATTTGCAGCCAA+TGG 0.497084 2.1:+71368131 MS.gene047576:CDS
TATATCCCATTTCTAGCTTG+CGG 0.497714 2.1:+71371156 MS.gene047576:CDS
TCTTCATCGGCTTCTTGAGA+AGG 0.501095 2.1:+71370795 MS.gene047576:CDS
AGTACCTGACTCCAGCTGCC+TGG 0.508337 2.1:-71366682 None:intergenic
ACACCTTCAATCGGAGCCAT+TGG 0.510050 2.1:-71368147 None:intergenic
TTGGATTGAATCCTTCTGGA+GGG 0.511479 2.1:-71370768 None:intergenic
GGGGCAATAGGAGGTTGTAC+TGG 0.511552 2.1:-71371255 None:intergenic
GTGGTTGGAAGGCCCTAATA+AGG 0.511729 2.1:+71371131 MS.gene047576:CDS
GGTCCCCGCAAGCTAGAAAT+GGG 0.513086 2.1:-71371161 None:intergenic
TCCGATTGAAGGTGTTATCC+AGG 0.517786 2.1:+71368155 MS.gene047576:CDS
TAGTTATATCACCCTGCACC+TGG 0.518978 2.1:-71368173 None:intergenic
CACAAGCCTTCTATACTGTC+AGG 0.519250 2.1:+71369665 MS.gene047576:CDS
TATCAGAATCATATCCAGTA+AGG 0.519570 2.1:-71371182 None:intergenic
ATATGCAAGATCAGGAATCC+AGG 0.523232 2.1:-71371347 None:intergenic
CAGGTGCAAGCTTGGCTGGA+AGG 0.527605 2.1:-71367637 None:intergenic
ACTCTAGAGCTCTCTTGTAA+GGG 0.527637 2.1:-71371278 None:intergenic
TGCGAAGATATTTAGAGGAA+AGG 0.528045 2.1:+71369641 MS.gene047576:CDS
TCAATCCAAAAGATCTTCAT+CGG 0.528148 2.1:+71370782 MS.gene047576:CDS
GTAGATTTATGTGCTGCTCC+AGG 0.528472 2.1:+71366664 MS.gene047576:CDS
TGTGTTAGTGGGTGGTTGGA+AGG 0.530748 2.1:+71371120 MS.gene047576:CDS
ACCTGGATAACACCTTCAAT+CGG 0.534040 2.1:-71368156 None:intergenic
TGGATTGAATCCTTCTGGAG+GGG 0.538206 2.1:-71370767 None:intergenic
TACCGAAAAGCGAAAGAAGA+AGG 0.538413 2.1:+71366359 MS.gene047576:CDS
GCCGACCTTGTTGTGTGCGA+TGG 0.542550 2.1:+71368934 MS.gene047576:CDS
AACCATGGGCAAAGCTTCAA+GGG 0.544253 2.1:+71366233 None:intergenic
AGTTTGCAGATTGTGTTAGT+GGG 0.550426 2.1:+71371109 MS.gene047576:intron
CCTGTATCATCTACCCCTGA+TGG 0.551247 2.1:-71370826 None:intergenic
AGATTGTGTTAGTGGGTGGT+TGG 0.553179 2.1:+71371116 MS.gene047576:intron
AGTAGTCGTAATTCCAGCAT+AGG 0.557095 2.1:+71370360 MS.gene047576:CDS
TCCACTGCCTAAAGTTGCTG+GGG 0.574703 2.1:+71371212 MS.gene047576:CDS
GAAAATTACTCCCCTCCAGA+AGG 0.574957 2.1:+71370757 MS.gene047576:CDS
TTGCAGATTGTGTTAGTGGG+TGG 0.575776 2.1:+71371112 MS.gene047576:intron
CTCTAGAGCTCTCTTGTAAG+GGG 0.577035 2.1:-71371277 None:intergenic
GAAAAGCGAAAGAAGAAGGT+TGG 0.578774 2.1:+71366363 MS.gene047576:CDS
CAAAGCTTCAAGGGATAAGA+GGG 0.579751 2.1:+71366242 MS.gene047576:CDS
CTCATGTACTGAAGGAAGGA+GGG 0.582274 2.1:+71369610 MS.gene047576:CDS
AGAACTTGAAAATCTCTCCC+TGG 0.583460 2.1:+71371329 MS.gene047576:CDS
GTGTGCGATGGTGCTCCTGA+TGG 0.586485 2.1:+71368946 MS.gene047576:CDS
TATCCCATTTCTAGCTTGCG+GGG 0.586932 2.1:+71371158 MS.gene047576:CDS
TAATGCTCGGACTGCTGAAG+TGG 0.587470 2.1:+71368194 MS.gene047576:CDS
AATTGTTACTCATGTACTGA+AGG 0.593299 2.1:+71369602 MS.gene047576:CDS
GTTACTCATGTACTGAAGGA+AGG 0.596222 2.1:+71369606 MS.gene047576:CDS
TTTGGATTGAATCCTTCTGG+AGG 0.598385 2.1:-71370769 None:intergenic
CTAGAGCTCTCTTGTAAGGG+GGG 0.605069 2.1:-71371275 None:intergenic
AGAAGGTTGGAAGTCCATCA+GGG 0.611108 2.1:+71370812 MS.gene047576:CDS
ACTCATGTACTGAAGGAAGG+AGG 0.615741 2.1:+71369609 MS.gene047576:CDS
ACCATCGCACACAACAAGGT+CGG 0.624891 2.1:-71368935 None:intergenic
TATGCAAGATCAGGAATCCA+GGG 0.628400 2.1:-71371346 None:intergenic
GAGCACCATCGCACACAACA+AGG 0.633636 2.1:-71368939 None:intergenic
TCTAGAGCTCTCTTGTAAGG+GGG 0.635566 2.1:-71371276 None:intergenic
GAAGGTGTTATCCAGGTGCA+GGG 0.645167 2.1:+71368162 MS.gene047576:CDS
AGGGTGATATAACTAATGCT+CGG 0.647655 2.1:+71368181 MS.gene047576:CDS
GCTTTGCAAAAGTCACCACA+GGG 0.664958 2.1:-71370332 None:intergenic
TAGAGCTCTCTTGTAAGGGG+GGG 0.669752 2.1:-71371274 None:intergenic
CCACTGCCTAAAGTTGCTGG+GGG 0.698850 2.1:+71371213 MS.gene047576:CDS
AGTTACCGGACTTCATGACA+TGG 0.714363 2.1:+71369196 MS.gene047576:intron
GAAGGTTGGAAGTCCATCAG+GGG 0.734678 2.1:+71370813 MS.gene047576:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTATATAAATGAAAACTTT+GGG - chr2.1:71367244-71367263 None:intergenic 10.0%
!!! TAAATTTTTAAAGTATTATC+TGG - chr2.1:71367590-71367609 None:intergenic 10.0%
!!! TTTTATATAAATGAAAACTT+TGG - chr2.1:71367245-71367264 None:intergenic 10.0%
!! AAAAAAAATAGTAACAAACA+AGG - chr2.1:71370401-71370420 None:intergenic 15.0%
!! AATTACATTTAAATGATACT+AGG - chr2.1:71366848-71366867 None:intergenic 15.0%
!! ATAATTAAAATCAGATTTCA+AGG - chr2.1:71366461-71366480 None:intergenic 15.0%
!! CTAAAATATAATTCACTTTA+AGG + chr2.1:71367089-71367108 MS.gene047576:intron 15.0%
!! GAAAAAAGAAAAAGAAATTA+AGG - chr2.1:71368590-71368609 None:intergenic 15.0%
!! TATTAGATTTGAATCTTTAA+CGG + chr2.1:71370620-71370639 MS.gene047576:intron 15.0%
!! TTATATAAATGAAAACTTTG+GGG - chr2.1:71367243-71367262 None:intergenic 15.0%
!!! CTTAAAGTGAATTATATTTT+AGG - chr2.1:71367091-71367110 None:intergenic 15.0%
!!! TACTTTAAAAATTTATATGC+AGG + chr2.1:71367595-71367614 MS.gene047576:intron 15.0%
!! AGTTATAAAAGCTAACTAAA+AGG - chr2.1:71369794-71369813 None:intergenic 20.0%
!! AGTTTCTTTATGAATTGTTA+TGG + chr2.1:71370450-71370469 MS.gene047576:intron 20.0%
!! ATTCTTAAGATAAGTTTAAG+AGG - chr2.1:71366986-71367005 None:intergenic 20.0%
!! CAATAAATTCAAAAGAAAAC+AGG - chr2.1:71367934-71367953 None:intergenic 20.0%
!! CTAAATAACTCATAATAAAG+GGG + chr2.1:71370219-71370238 MS.gene047576:intron 20.0%
!! CTATCTCTAATTATATATTC+AGG - chr2.1:71366541-71366560 None:intergenic 20.0%
!! GCTAAATAACTCATAATAAA+GGG + chr2.1:71370218-71370237 MS.gene047576:intron 20.0%
!! TAAAAAAGATAACACCATTA+CGG + chr2.1:71367424-71367443 MS.gene047576:intron 20.0%
!! TATATAAATGAAAACTTTGG+GGG - chr2.1:71367242-71367261 None:intergenic 20.0%
!! TGCTAAATAACTCATAATAA+AGG + chr2.1:71370217-71370236 MS.gene047576:intron 20.0%
!! TTAATGTATTAGAATTGACA+TGG - chr2.1:71369114-71369133 None:intergenic 20.0%
!! TTGGTTGTAGTTTAAAAATT+TGG + chr2.1:71369160-71369179 MS.gene047576:intron 20.0%
!!! AATATAATTCACTTTAAGGA+AGG + chr2.1:71367093-71367112 MS.gene047576:intron 20.0%
!!! AATTATGATTTTTGGATTCA+AGG - chr2.1:71370269-71370288 None:intergenic 20.0%
!!! GAAGAATTTAACATTTTTGA+AGG + chr2.1:71366422-71366441 MS.gene047576:CDS 20.0%
!!! GACAAAATAATTGACTTTAA+AGG + chr2.1:71370000-71370019 MS.gene047576:intron 20.0%
!!! GGTGTATAGTTTAATTTAAA+CGG + chr2.1:71369477-71369496 MS.gene047576:intron 20.0%
!!! GTATATGGAATTATGATTTT+TGG - chr2.1:71370277-71370296 None:intergenic 20.0%
!!! TCATGTATACTTAATTTTCA+TGG + chr2.1:71371058-71371077 MS.gene047576:intron 20.0%
!!! TCATTTCTGGAAATAAATTA+TGG + chr2.1:71369832-71369851 MS.gene047576:intron 20.0%
!!! TGATAGTTGATATTTCATTA+TGG + chr2.1:71369322-71369341 MS.gene047576:intron 20.0%
!!! TGTAACTATTTATCTCTTTT+AGG + chr2.1:71369282-71369301 MS.gene047576:intron 20.0%
!!! TTTTTTTTGGTTGGTTTTTT+GGG + chr2.1:71366295-71366314 MS.gene047576:intron 20.0%
!!! TTTTTTTTTGGTTGGTTTTT+TGG + chr2.1:71366294-71366313 MS.gene047576:intron 20.0%
! AAACAATGTTTAAAAGGATG+AGG - chr2.1:71367907-71367926 None:intergenic 25.0%
! AAATCAATAGCTACAATAAG+AGG - chr2.1:71368123-71368142 None:intergenic 25.0%
! AACAAGCATATGTCTATTAA+AGG - chr2.1:71369400-71369419 None:intergenic 25.0%
! ACAAAAAGCAACTTAGTATA+TGG - chr2.1:71370292-71370311 None:intergenic 25.0%
! AGTGAAATAATGAAAAGACA+TGG + chr2.1:71368655-71368674 MS.gene047576:intron 25.0%
! ATAATTACGACCAACATAAA+AGG - chr2.1:71367786-71367805 None:intergenic 25.0%
! ATACATTAACTCTGATATGT+AGG + chr2.1:71369125-71369144 MS.gene047576:intron 25.0%
! ATCTAATAATTGCAAGTGTT+TGG - chr2.1:71370608-71370627 None:intergenic 25.0%
! ATGATTAACAATCTACATGT+AGG - chr2.1:71370961-71370980 None:intergenic 25.0%
! ATTACTATCTCTGCTAAAAA+TGG - chr2.1:71366509-71366528 None:intergenic 25.0%
! ATTGCCATGTATAAACAATA+GGG + chr2.1:71367511-71367530 MS.gene047576:intron 25.0%
! ATTTAGATATGATCATGAGT+AGG - chr2.1:71370156-71370175 None:intergenic 25.0%
! CGCATTTATTAGATTAGATA+AGG - chr2.1:71369442-71369461 None:intergenic 25.0%
! GGAAGAAAACAATGTTTAAA+AGG - chr2.1:71367913-71367932 None:intergenic 25.0%
! TAAGATAAGTTTAAGAGGAA+GGG - chr2.1:71366981-71367000 None:intergenic 25.0%
! TATAAAAGCTAACTAAAAGG+TGG - chr2.1:71369791-71369810 None:intergenic 25.0%
! TATTGCCATGTATAAACAAT+AGG + chr2.1:71367510-71367529 MS.gene047576:intron 25.0%
! TGAAACTATAAGTAATACAG+TGG - chr2.1:71366611-71366630 None:intergenic 25.0%
! TGATTAACAATCTACATGTA+GGG - chr2.1:71370960-71370979 None:intergenic 25.0%
! TGATTTGATGTTAGCTAAAT+TGG + chr2.1:71366320-71366339 MS.gene047576:intron 25.0%
! TGCTCTTAAGAATTTCTATA+AGG - chr2.1:71370863-71370882 None:intergenic 25.0%
! TGCTGTATTATCTTATGTTA+AGG + chr2.1:71367990-71368009 MS.gene047576:intron 25.0%
! TGTAATTGACATGAATATCT+TGG + chr2.1:71366861-71366880 MS.gene047576:intron 25.0%
! TTAAGATAAGTTTAAGAGGA+AGG - chr2.1:71366982-71367001 None:intergenic 25.0%
!! AAACAGCAAATGATTTTTGA+TGG - chr2.1:71367401-71367420 None:intergenic 25.0%
!! AACAGCAAATGATTTTTGAT+GGG - chr2.1:71367400-71367419 None:intergenic 25.0%
!! ACTATAGTATCCTTTTATGT+TGG + chr2.1:71367773-71367792 MS.gene047576:intron 25.0%
!! ATTACTTCCAATGTTTTCAA+AGG - chr2.1:71369883-71369902 None:intergenic 25.0%
!! ATTTCATTATGGTTACCTTT+TGG + chr2.1:71369333-71369352 MS.gene047576:intron 25.0%
!! ATTTTCCATAGCTTAGTAAT+TGG + chr2.1:71370477-71370496 MS.gene047576:intron 25.0%
!!! ACTGTTCTTTTTTTTTTGGT+TGG + chr2.1:71366286-71366305 MS.gene047576:intron 25.0%
!!! AGTTATATTTTAACTCCTAC+AGG - chr2.1:71370078-71370097 None:intergenic 25.0%
!!! CAATTATTTTGTCAACCAAT+TGG - chr2.1:71369993-71370012 None:intergenic 25.0%
!!! TGTTTCTGCTCTAAAATTTA+TGG + chr2.1:71368446-71368465 MS.gene047576:intron 25.0%
!!! TTAAAAAAAGCATCAACTCA+AGG + chr2.1:71371300-71371319 MS.gene047576:CDS 25.0%
!!! TTTTTTTGGTTGGTTTTTTG+GGG + chr2.1:71366296-71366315 MS.gene047576:intron 25.0%
AAACAGCTAAATTCAACTAG+TGG - chr2.1:71370574-71370593 None:intergenic 30.0%
AACAAAGCATATAATCTCCA+TGG - chr2.1:71367679-71367698 None:intergenic 30.0%
AACTACCAATTACTAAGCTA+TGG - chr2.1:71370485-71370504 None:intergenic 30.0%
AAGATAAGTTTAAGAGGAAG+GGG - chr2.1:71366980-71366999 None:intergenic 30.0%
AATAAAGGGGAAAATGGTAA+AGG + chr2.1:71370232-71370251 MS.gene047576:intron 30.0%
AATAAAGTGACACTCATTTC+TGG + chr2.1:71369819-71369838 MS.gene047576:intron 30.0%
AATAATGAAAAGACATGGTG+TGG + chr2.1:71368660-71368679 MS.gene047576:intron 30.0%
AATGGGATATACACCTTATT+AGG - chr2.1:71371147-71371166 None:intergenic 30.0%
AATGTCTCAGAAATAGTGAA+AGG + chr2.1:71366566-71366585 MS.gene047576:intron 30.0%
AATTGTTACTCATGTACTGA+AGG + chr2.1:71369602-71369621 MS.gene047576:CDS 30.0%
ACTCATAATAAAGGGGAAAA+TGG + chr2.1:71370226-71370245 MS.gene047576:intron 30.0%
AGGGATAAATTTATTCTCGT+TGG - chr2.1:71369080-71369099 None:intergenic 30.0%
ATCTTGGTTTAGATTTCTTC+TGG + chr2.1:71366877-71366896 MS.gene047576:intron 30.0%
ATGAAAACCAAATCAGACTT+AGG + chr2.1:71367447-71367466 MS.gene047576:intron 30.0%
ATGAACTGAACAAAAGCAAT+TGG - chr2.1:71368612-71368631 None:intergenic 30.0%
ATGGGATATACACCTTATTA+GGG - chr2.1:71371146-71371165 None:intergenic 30.0%
ATGTCAATGAATGCATTTAC+AGG - chr2.1:71367729-71367748 None:intergenic 30.0%
ATTCATACCTAAGTCTGATT+TGG - chr2.1:71367457-71367476 None:intergenic 30.0%
CAAAAGAAAGCAGAAATATG+TGG - chr2.1:71368562-71368581 None:intergenic 30.0%
CAATTACCAAACACAAACTA+TGG + chr2.1:71366764-71366783 MS.gene047576:intron 30.0%
CTAATTACTTACTTCTTGCA+GGG + chr2.1:71369573-71369592 MS.gene047576:intron 30.0%
GGATTTGAATTTAAACCTAG+AGG + chr2.1:71367114-71367133 MS.gene047576:intron 30.0%
GTAAATGCATTCATTGACAT+AGG + chr2.1:71367729-71367748 MS.gene047576:intron 30.0%
GTCAAACTATACACATGAAT+TGG - chr2.1:71368724-71368743 None:intergenic 30.0%
GTTGTATTTATCAAGAGAGT+AGG - chr2.1:71370036-71370055 None:intergenic 30.0%
TAACTGATATCACAACACAA+AGG - chr2.1:71367025-71367044 None:intergenic 30.0%
TAATAATTGCAAGTGTTTGG+AGG - chr2.1:71370605-71370624 None:intergenic 30.0%
TAATTACTTACTTCTTGCAG+GGG + chr2.1:71369574-71369593 MS.gene047576:intron 30.0%
TAGATGATACAGGTATATGT+CGG + chr2.1:71370836-71370855 MS.gene047576:intron 30.0%
TATCAGAATCATATCCAGTA+AGG - chr2.1:71371185-71371204 None:intergenic 30.0%
TCAAATCATTTGTAGCTGTT+TGG - chr2.1:71369022-71369041 None:intergenic 30.0%
TCAATCCAAAAGATCTTCAT+CGG + chr2.1:71370782-71370801 MS.gene047576:CDS 30.0%
TCCAATTCCTGAAATCTTAA+TGG - chr2.1:71369710-71369729 None:intergenic 30.0%
TCTAATTCTAATGACAAGAG+TGG - chr2.1:71368299-71368318 None:intergenic 30.0%
TTACTGGATATGATTCTGAT+AGG + chr2.1:71371184-71371203 MS.gene047576:CDS 30.0%
TTCATTGCGAAGATATTTAG+AGG + chr2.1:71369636-71369655 MS.gene047576:CDS 30.0%
TTGCCATGTATAAACAATAG+GGG + chr2.1:71367512-71367531 MS.gene047576:intron 30.0%
! AAACAATGATAATGACCTCT+AGG - chr2.1:71367132-71367151 None:intergenic 30.0%
! AACAAAAACCTTTTTCCACT+AGG - chr2.1:71368513-71368532 None:intergenic 30.0%
! GTGATAATTAACAGAGTGTT+TGG - chr2.1:71368031-71368050 None:intergenic 30.0%
! TAGTTATGAATCTTTTGACG+AGG + chr2.1:71370650-71370669 MS.gene047576:intron 30.0%
! TATGCATTTTCTTTACCATC+AGG - chr2.1:71368964-71368983 None:intergenic 30.0%
! TCCAGAGTTTTACCAAAATT+CGG + chr2.1:71369952-71369971 MS.gene047576:intron 30.0%
! TTCCAAACCTTTGAAAACAT+TGG + chr2.1:71369873-71369892 MS.gene047576:intron 30.0%
! TTCCAATGTTTTCAAAGGTT+TGG - chr2.1:71369878-71369897 None:intergenic 30.0%
!! ATGTAGGCTTTTTCTCATTT+TGG + chr2.1:71369141-71369160 MS.gene047576:intron 30.0%
!! GACTATTTCTAAGAAACAAG+TGG - chr2.1:71367345-71367364 None:intergenic 30.0%
!! TGCTATTTCAAACAATGTGT+AGG - chr2.1:71369735-71369754 None:intergenic 30.0%
!!! AATTTCGTTCTTTTTTGCAG+GGG + chr2.1:71366630-71366649 MS.gene047576:intron 30.0%
!!! ATATAGGTCTTGCTTTTTTG+AGG + chr2.1:71368822-71368841 MS.gene047576:intron 30.0%
!!! ATTGTTTCTGTTCCGAATTT+TGG - chr2.1:71369967-71369986 None:intergenic 30.0%
!!! CAATTTCGTTCTTTTTTGCA+GGG + chr2.1:71366629-71366648 MS.gene047576:intron 30.0%
!!! TCAATTTCGTTCTTTTTTGC+AGG + chr2.1:71366628-71366647 MS.gene047576:intron 30.0%
!!! TCGCACTGTTCTTTTTTTTT+TGG + chr2.1:71366282-71366301 MS.gene047576:intron 30.0%
AACAGAAACAATGAGCCAAT+TGG + chr2.1:71369975-71369994 MS.gene047576:intron 35.0%
AAGAAACCGTAATGTCAATG+AGG + chr2.1:71366811-71366830 MS.gene047576:intron 35.0%
ACATCACCAAAGGATCAATT+TGG - chr2.1:71368772-71368791 None:intergenic 35.0%
ACATCTGTCAACAGAATTGA+AGG - chr2.1:71368237-71368256 None:intergenic 35.0%
ACCTCACATAACACATATCA+GGG - chr2.1:71367866-71367885 None:intergenic 35.0%
ACTAAAGTTCTTACCTATGC+TGG - chr2.1:71370376-71370395 None:intergenic 35.0%
ACTCAAATCGTGTTTCGAAA+TGG - chr2.1:71368273-71368292 None:intergenic 35.0%
AGAAACCGTAATGTCAATGA+GGG + chr2.1:71366812-71366831 MS.gene047576:intron 35.0%
AGATAAGTTTAAGAGGAAGG+GGG - chr2.1:71366979-71366998 None:intergenic 35.0%
AGCTGAATTCATTTCCATTC+AGG - chr2.1:71370925-71370944 None:intergenic 35.0%
AGGGTGATATAACTAATGCT+CGG + chr2.1:71368181-71368200 MS.gene047576:CDS 35.0%
AGTCTAACTATTAACAGACC+TGG + chr2.1:71367361-71367380 MS.gene047576:intron 35.0%
AGTTTGCAGATTGTGTTAGT+GGG + chr2.1:71371109-71371128 MS.gene047576:intron 35.0%
ATGAAACTCTACGCAAATCA+AGG - chr2.1:71369509-71369528 None:intergenic 35.0%
CAAATACCTGACAGTATAGA+AGG - chr2.1:71369674-71369693 None:intergenic 35.0%
CATAGACAACCTATCAATGA+AGG - chr2.1:71366907-71366926 None:intergenic 35.0%
CTCAAATCGTGTTTCGAAAT+GGG - chr2.1:71368272-71368291 None:intergenic 35.0%
GCATATGTCTATTAAAGGTG+AGG - chr2.1:71369395-71369414 None:intergenic 35.0%
GCATTAATTACTCCACATCA+AGG - chr2.1:71371084-71371103 None:intergenic 35.0%
GCCATTAAGATTTCAGGAAT+TGG + chr2.1:71369706-71369725 MS.gene047576:intron 35.0%
GCGATCGCAAAAAATATTGA+AGG + chr2.1:71369355-71369374 MS.gene047576:intron 35.0%
GCTAATTACTTACTTCTTGC+AGG + chr2.1:71369572-71369591 MS.gene047576:intron 35.0%
GCTGAATTCATTTCCATTCA+GGG - chr2.1:71370924-71370943 None:intergenic 35.0%
TCAAATCGTGTTTCGAAATG+GGG - chr2.1:71368271-71368290 None:intergenic 35.0%
TCTCATGATGAATGAACTTG+AGG - chr2.1:71368359-71368378 None:intergenic 35.0%
TCTGGTTATCCTTCATTGAT+AGG + chr2.1:71366895-71366914 MS.gene047576:intron 35.0%
TGACATGGAGCAACAAAAAA+GGG - chr2.1:71369099-71369118 None:intergenic 35.0%
TGCCATGTATAAACAATAGG+GGG + chr2.1:71367513-71367532 MS.gene047576:intron 35.0%
TGCGAAGATATTTAGAGGAA+AGG + chr2.1:71369641-71369660 MS.gene047576:CDS 35.0%
TGGAAAACTTACTTTGCATC+AGG - chr2.1:71367659-71367678 None:intergenic 35.0%
TTCAAAGTTAGAAGTCGTAG+TGG - chr2.1:71369913-71369932 None:intergenic 35.0%
TTGACATGGAGCAACAAAAA+AGG - chr2.1:71369100-71369119 None:intergenic 35.0%
TTGGCTAGACTTTATAATGC+AGG - chr2.1:71368705-71368724 None:intergenic 35.0%
TTTGACGAGGTGGTTTAAAA+TGG + chr2.1:71370663-71370682 MS.gene047576:intron 35.0%
! AAAACCTTTTTCCACTAGGT+CGG - chr2.1:71368509-71368528 None:intergenic 35.0%
! CAGGTCATTAGACATTTTGA+TGG + chr2.1:71368904-71368923 MS.gene047576:intron 35.0%
! GATGCAAAGTAAGTTTTCCA+TGG + chr2.1:71367659-71367678 MS.gene047576:intron 35.0%
! TCTAGTACAACTGGATTTTC+AGG - chr2.1:71367320-71367339 None:intergenic 35.0%
! TCTTTTGGATTGAATCCTTC+TGG - chr2.1:71370775-71370794 None:intergenic 35.0%
! TGAGAAGAAGTACAAGAGAA+TGG - chr2.1:71366727-71366746 None:intergenic 35.0%
! TGTTTTCTCTTGTTCTGTTC+AGG + chr2.1:71368885-71368904 MS.gene047576:intron 35.0%
! TTATGAATCTTTTGACGAGG+TGG + chr2.1:71370653-71370672 MS.gene047576:intron 35.0%
!! AACACAAAGGAGTACTATAC+AGG - chr2.1:71367012-71367031 None:intergenic 35.0%
!! AACCTTCTTCTTTCGCTTTT+CGG - chr2.1:71366364-71366383 None:intergenic 35.0%
!! CTGGAATTACGACTACTTTT+TGG - chr2.1:71370357-71370376 None:intergenic 35.0%
!! GCTAAAATTGTTTTTCCCTG+TGG + chr2.1:71370317-71370336 MS.gene047576:intron 35.0%
!! TAATTTTCATGGCCTTGATG+TGG + chr2.1:71371069-71371088 MS.gene047576:intron 35.0%
!! TAGACATTTTGATGGTTGCA+AGG + chr2.1:71368912-71368931 MS.gene047576:CDS 35.0%
!! TATATCCCATTTCTAGCTTG+CGG + chr2.1:71371156-71371175 MS.gene047576:CDS 35.0%
!! TCCGAATTTTGGTAAAACTC+TGG - chr2.1:71369956-71369975 None:intergenic 35.0%
!! TGTTAGCTAAATTGGTTTGC+AGG + chr2.1:71366328-71366347 MS.gene047576:intron 35.0%
!!! GATTTGGTTTTCATCCGTAA+TGG - chr2.1:71367441-71367460 None:intergenic 35.0%
!!! GCTTCATTTTTTGCAGTTAC+CGG + chr2.1:71369182-71369201 MS.gene047576:intron 35.0%
!!! TATTTTTTGCGATCGCCAAA+AGG - chr2.1:71369351-71369370 None:intergenic 35.0%
AACCAAAACGACATCACCAA+AGG - chr2.1:71368782-71368801 None:intergenic 40.0%
ACCTGGATAACACCTTCAAT+CGG - chr2.1:71368159-71368178 None:intergenic 40.0%
AGAACTTGAAAATCTCTCCC+TGG + chr2.1:71371329-71371348 MS.gene047576:CDS 40.0%
AGATAAGGTAGTAGACTGAC+TGG - chr2.1:71369427-71369446 None:intergenic 40.0%
AGTAGTCGTAATTCCAGCAT+AGG + chr2.1:71370360-71370379 MS.gene047576:CDS 40.0%
ATGTGGTTGAAATTCGACAG+AGG - chr2.1:71368545-71368564 None:intergenic 40.0%
CAAAGCTTCAAGGGATAAGA+GGG + chr2.1:71366242-71366261 MS.gene047576:CDS 40.0%
CAAATCGTGTTTCGAAATGG+GGG - chr2.1:71368270-71368289 None:intergenic 40.0%
CAATCCCCTCATTGACATTA+CGG - chr2.1:71366820-71366839 None:intergenic 40.0%
CACCTCACATAACACATATC+AGG - chr2.1:71367867-71367886 None:intergenic 40.0%
CTCACTAATGCAAATGAAGG+AGG + chr2.1:71367285-71367304 MS.gene047576:intron 40.0%
CTCCTTCATTTGCATTAGTG+AGG - chr2.1:71367287-71367306 None:intergenic 40.0%
GAAAAGCGAAAGAAGAAGGT+TGG + chr2.1:71366363-71366382 MS.gene047576:CDS 40.0%
GAAACCGTAATGTCAATGAG+GGG + chr2.1:71366813-71366832 MS.gene047576:intron 40.0%
GAGTTTGCAGATTGTGTTAG+TGG + chr2.1:71371108-71371127 MS.gene047576:intron 40.0%
GATAAGTTTAAGAGGAAGGG+GGG - chr2.1:71366978-71366997 None:intergenic 40.0%
GATGTGAGATCTCAATGTCA+TGG - chr2.1:71367707-71367726 None:intergenic 40.0%
GCCATGTATAAACAATAGGG+GGG + chr2.1:71367514-71367533 MS.gene047576:intron 40.0%
GCTTACTGCAAGTATGAGTT+GGG - chr2.1:71369237-71369256 None:intergenic 40.0%
GGAACTTGGAAGGATCATAT+AGG + chr2.1:71368806-71368825 MS.gene047576:intron 40.0%
GTTACTCATGTACTGAAGGA+AGG + chr2.1:71369606-71369625 MS.gene047576:CDS 40.0%
GTTGCTCCAAATTGATCCTT+TGG + chr2.1:71368763-71368782 MS.gene047576:intron 40.0%
TACCGAAAAGCGAAAGAAGA+AGG + chr2.1:71366359-71366378 MS.gene047576:CDS 40.0%
TCCCCCCTATTGTTTATACA+TGG - chr2.1:71367518-71367537 None:intergenic 40.0%
TCCCTGATATGTGTTATGTG+AGG + chr2.1:71367862-71367881 MS.gene047576:intron 40.0%
TCCTGAAATCTTAATGGCGA+GGG - chr2.1:71369704-71369723 None:intergenic 40.0%
TGCCTCACTAATGCAAATGA+AGG + chr2.1:71367282-71367301 MS.gene047576:intron 40.0%
TGCTTACTGCAAGTATGAGT+TGG - chr2.1:71369238-71369257 None:intergenic 40.0%
TTAAACTATACACCACGCAC+TGG - chr2.1:71369471-71369490 None:intergenic 40.0%
TTACCCTCAACCTCTTTCAT+CGG + chr2.1:71369053-71369072 MS.gene047576:intron 40.0%
TTCAAAGTTGCATCCCTGAA+TGG + chr2.1:71370908-71370927 MS.gene047576:intron 40.0%
TTCATCCATGTCATGAAGTC+CGG - chr2.1:71369204-71369223 None:intergenic 40.0%
TTCCTGAAATCTTAATGGCG+AGG - chr2.1:71369705-71369724 None:intergenic 40.0%
TTGCTGCATCATGATATGCA+GGG + chr2.1:71368086-71368105 MS.gene047576:intron 40.0%
TTGGATTGAATCCTTCTGGA+GGG - chr2.1:71370771-71370790 None:intergenic 40.0%
TTTGGATTGAATCCTTCTGG+AGG - chr2.1:71370772-71370791 None:intergenic 40.0%
! AAACCTTTTTCCACTAGGTC+GGG - chr2.1:71368508-71368527 None:intergenic 40.0%
! AAAGCGCCATAGTTTGTGTT+TGG - chr2.1:71366773-71366792 None:intergenic 40.0%
! AAATGAAAACTTTGGGGGCT+GGG - chr2.1:71367237-71367256 None:intergenic 40.0%
! AAGGATCAATTTGGAGCAAC+AGG - chr2.1:71368763-71368782 None:intergenic 40.0%
! ACAGAGTGTTTGGAATGTGA+AGG - chr2.1:71368021-71368040 None:intergenic 40.0%
! ACGAGGTGGTTTAAAATGGT+AGG + chr2.1:71370667-71370686 MS.gene047576:intron 40.0%
! ACTTGTAGCGTGCTTTTGTT+TGG + chr2.1:71370117-71370136 MS.gene047576:intron 40.0%
! AGAAGCCGATGAAGATCTTT+TGG - chr2.1:71370790-71370809 None:intergenic 40.0%
! GGTGGTTTAAAATGGTAGGA+AGG + chr2.1:71370671-71370690 MS.gene047576:intron 40.0%
! GGTTTAAAATGGTAGGAAGG+CGG + chr2.1:71370674-71370693 MS.gene047576:intron 40.0%
! GTTTAAAATGGTAGGAAGGC+GGG + chr2.1:71370675-71370694 MS.gene047576:intron 40.0%
! TAAATGAAAACTTTGGGGGC+TGG - chr2.1:71367238-71367257 None:intergenic 40.0%
!! AACTCTAGAGCTCTCTTGTA+AGG - chr2.1:71371282-71371301 None:intergenic 40.0%
!! ACTCTAGAGCTCTCTTGTAA+GGG - chr2.1:71371281-71371300 None:intergenic 40.0%
!! AGCTATTGATTTGCAGCCAA+TGG + chr2.1:71368131-71368150 MS.gene047576:CDS 40.0%
!! ATATCCCATTTCTAGCTTGC+GGG + chr2.1:71371157-71371176 MS.gene047576:CDS 40.0%
!! CAAGTGGTTTCTAGTACAAC+TGG - chr2.1:71367329-71367348 None:intergenic 40.0%
!! TTGGTTTGTTGGAACTTGGA+AGG + chr2.1:71368796-71368815 MS.gene047576:intron 40.0%
!!! ATCCTTTGGTGATGTCGTTT+TGG + chr2.1:71368777-71368796 MS.gene047576:intron 40.0%
!!! CGTTTTGGTTTGTTGGAACT+TGG + chr2.1:71368792-71368811 MS.gene047576:intron 40.0%
!!! GGGAGAGATTTTCAAGTTCT+CGG - chr2.1:71371329-71371348 None:intergenic 40.0%
!!! GTGATGTCGTTTTGGTTTGT+TGG + chr2.1:71368785-71368804 MS.gene047576:intron 40.0%
AAACTGCAAATGCCTCTGCA+AGG - chr2.1:71370735-71370754 None:intergenic 45.0%
AACTGCAAATGCCTCTGCAA+GGG - chr2.1:71370734-71370753 None:intergenic 45.0%
ACTCATGTACTGAAGGAAGG+AGG + chr2.1:71369609-71369628 MS.gene047576:CDS 45.0%
AGAAGGTTGGAAGTCCATCA+GGG + chr2.1:71370812-71370831 MS.gene047576:CDS 45.0%
AGTTACCGGACTTCATGACA+TGG + chr2.1:71369196-71369215 MS.gene047576:intron 45.0%
ATCCACTGCCTAAAGTTGCT+GGG + chr2.1:71371211-71371230 MS.gene047576:CDS 45.0%
ATGGGTCGTATACTATGACC+AGG - chr2.1:71367382-71367401 None:intergenic 45.0%
CACAAGCCTTCTATACTGTC+AGG + chr2.1:71369665-71369684 MS.gene047576:CDS 45.0%
CCTGAAATCTTAATGGCGAG+GGG - chr2.1:71369703-71369722 None:intergenic 45.0%
CGTAATGTCAATGAGGGGAT+TGG + chr2.1:71366818-71366837 MS.gene047576:intron 45.0%
CTCATGTACTGAAGGAAGGA+GGG + chr2.1:71369610-71369629 MS.gene047576:CDS 45.0%
CTGCATATCATGATGCAGCA+AGG - chr2.1:71368087-71368106 None:intergenic 45.0%
CTTCAAGGGATAAGAGGGTA+TGG + chr2.1:71366247-71366266 MS.gene047576:intron 45.0%
CTTGCTGCATCATGATATGC+AGG + chr2.1:71368085-71368104 MS.gene047576:intron 45.0%
GAAAATTACTCCCCTCCAGA+AGG + chr2.1:71370757-71370776 MS.gene047576:CDS 45.0%
GCAAAGCTTCAAGGGATAAG+AGG + chr2.1:71366241-71366260 MS.gene047576:CDS 45.0%
GCTTTGCAAAAGTCACCACA+GGG - chr2.1:71370335-71370354 None:intergenic 45.0%
GGGGAACTAACATTCTGTAC+TGG - chr2.1:71367210-71367229 None:intergenic 45.0%
TAGTTATATCACCCTGCACC+TGG - chr2.1:71368176-71368195 None:intergenic 45.0%
TATCCACTGCCTAAAGTTGC+TGG + chr2.1:71371210-71371229 MS.gene047576:CDS 45.0%
TATGTTCCCCCAGCAACTTT+AGG - chr2.1:71371222-71371241 None:intergenic 45.0%
TTAGTTGTTCACCCTTGCAG+AGG + chr2.1:71370720-71370739 MS.gene047576:intron 45.0%
TTGCAGATTGTGTTAGTGGG+TGG + chr2.1:71371112-71371131 MS.gene047576:intron 45.0%
! AACCTTTTTCCACTAGGTCG+GGG - chr2.1:71368507-71368526 None:intergenic 45.0%
! AATGAAAACTTTGGGGGCTG+GGG - chr2.1:71367236-71367255 None:intergenic 45.0%
! AGATTGTGTTAGTGGGTGGT+TGG + chr2.1:71371116-71371135 MS.gene047576:intron 45.0%
! GTAGATTTATGTGCTGCTCC+AGG + chr2.1:71366664-71366683 MS.gene047576:CDS 45.0%
! TCTAGAGCTCTCTTGTAAGG+GGG - chr2.1:71371279-71371298 None:intergenic 45.0%
! TGGATTGAATCCTTCTGGAG+GGG - chr2.1:71370770-71370789 None:intergenic 45.0%
!! CTCTAGAGCTCTCTTGTAAG+GGG - chr2.1:71371280-71371299 None:intergenic 45.0%
!! GTAGCGTGCTTTTGTTTGGT+TGG + chr2.1:71370121-71370140 MS.gene047576:intron 45.0%
!! TATCCCATTTCTAGCTTGCG+GGG + chr2.1:71371158-71371177 MS.gene047576:CDS 45.0%
!! TCCGATTGAAGGTGTTATCC+AGG + chr2.1:71368155-71368174 MS.gene047576:CDS 45.0%
!! TCTTCATCGGCTTCTTGAGA+AGG + chr2.1:71370795-71370814 MS.gene047576:CDS 45.0%
ACACCTTCAATCGGAGCCAT+TGG - chr2.1:71368150-71368169 None:intergenic 50.0%
ACCATCGCACACAACAAGGT+CGG - chr2.1:71368938-71368957 None:intergenic 50.0%
ACTCCTACAGGTGCACTTGT+TGG - chr2.1:71370066-71370085 None:intergenic 50.0%
CCATCAGGGGTAGATGATAC+AGG + chr2.1:71370826-71370845 MS.gene047576:CDS 50.0%
CCCCTCGCCATTAAGATTTC+AGG + chr2.1:71369700-71369719 MS.gene047576:intron 50.0%
CCTGTATCATCTACCCCTGA+TGG - chr2.1:71370829-71370848 None:intergenic 50.0%
CTAGAGCTCTCTTGTAAGGG+GGG - chr2.1:71371278-71371297 None:intergenic 50.0%
CTTTGCATCAGGTGCAAGCT+TGG - chr2.1:71367648-71367667 None:intergenic 50.0%
GAAGGTTGGAAGTCCATCAG+GGG + chr2.1:71370813-71370832 MS.gene047576:CDS 50.0%
GAGAAGGTTGGAAGTCCATC+AGG + chr2.1:71370811-71370830 MS.gene047576:CDS 50.0%
GGCTTTGCAAAAGTCACCAC+AGG - chr2.1:71370336-71370355 None:intergenic 50.0%
GGTCCGATGAAAGAGGTTGA+GGG - chr2.1:71369059-71369078 None:intergenic 50.0%
GTGGTTGGAAGGCCCTAATA+AGG + chr2.1:71371131-71371150 MS.gene047576:CDS 50.0%
TAATGCTCGGACTGCTGAAG+TGG + chr2.1:71368194-71368213 MS.gene047576:CDS 50.0%
TAGAGCTCTCTTGTAAGGGG+GGG - chr2.1:71371277-71371296 None:intergenic 50.0%
TCCACTGCCTAAAGTTGCTG+GGG + chr2.1:71371212-71371231 MS.gene047576:CDS 50.0%
TCTCGTTGGTCCGATGAAAG+AGG - chr2.1:71369066-71369085 None:intergenic 50.0%
TGGGGGAACATATCAGAGCT+TGG + chr2.1:71371230-71371249 MS.gene047576:CDS 50.0%
TGGTCCGATGAAAGAGGTTG+AGG - chr2.1:71369060-71369079 None:intergenic 50.0%
! ATGAAAACTTTGGGGGCTGG+GGG - chr2.1:71367235-71367254 None:intergenic 50.0%
! GCAAGTGTTTGGAGGCACAA+GGG - chr2.1:71370597-71370616 None:intergenic 50.0%
! TGCAAGTGTTTGGAGGCACA+AGG - chr2.1:71370598-71370617 None:intergenic 50.0%
! TGTGTTAGTGGGTGGTTGGA+AGG + chr2.1:71371120-71371139 MS.gene047576:CDS 50.0%
!! CATCGGCTTCTTGAGAAGGT+TGG + chr2.1:71370799-71370818 MS.gene047576:CDS 50.0%
!! GAAGGTGTTATCCAGGTGCA+GGG + chr2.1:71368162-71368181 MS.gene047576:CDS 50.0%
!! TGAAGGTGTTATCCAGGTGC+AGG + chr2.1:71368161-71368180 MS.gene047576:CDS 50.0%
AGGTCCCCGCAAGCTAGAAA+TGG - chr2.1:71371165-71371184 None:intergenic 55.0%
ATGTATCCACCCCGACCTAG+TGG + chr2.1:71368495-71368514 MS.gene047576:intron 55.0%
CACCCCGACCTAGTGGAAAA+AGG + chr2.1:71368502-71368521 MS.gene047576:intron 55.0%
CAGCCAATGGCTCCGATTGA+AGG + chr2.1:71368144-71368163 MS.gene047576:CDS 55.0%
CCACTGCCTAAAGTTGCTGG+GGG + chr2.1:71371213-71371232 MS.gene047576:CDS 55.0%
CTCTTGTAAGGGGGGGCAAT+AGG - chr2.1:71371270-71371289 None:intergenic 55.0%
GAGCACCATCGCACACAACA+AGG - chr2.1:71368942-71368961 None:intergenic 55.0%
GCACCAACAAGTGCACCTGT+AGG + chr2.1:71370060-71370079 MS.gene047576:intron 55.0%
GGGGCAATAGGAGGTTGTAC+TGG - chr2.1:71371258-71371277 None:intergenic 55.0%
GGTCCCCGCAAGCTAGAAAT+GGG - chr2.1:71371164-71371183 None:intergenic 55.0%
TTGTAAGGGGGGGCAATAGG+AGG - chr2.1:71371267-71371286 None:intergenic 55.0%
! CTTTTTCCACTAGGTCGGGG+TGG - chr2.1:71368504-71368523 None:intergenic 55.0%
AATGCGCACACACCAGTGCG+TGG + chr2.1:71369456-71369475 MS.gene047576:intron 60.0%
AGGCAGCTGGAGTCAGGTAC+TGG + chr2.1:71366684-71366703 MS.gene047576:intron 60.0%
AGTACCTGACTCCAGCTGCC+TGG - chr2.1:71366685-71366704 None:intergenic 60.0%
CAGGTGCAAGCTTGGCTGGA+AGG - chr2.1:71367640-71367659 None:intergenic 60.0%
CCCCCAGCAACTTTAGGCAG+TGG - chr2.1:71371216-71371235 None:intergenic 60.0%
GCATCAGGTGCAAGCTTGGC+TGG - chr2.1:71367644-71367663 None:intergenic 60.0%
GTGTGCGATGGTGCTCCTGA+TGG + chr2.1:71368946-71368965 MS.gene047576:CDS 60.0%
! AAACTTTGGGGGCTGGGGGT+AGG - chr2.1:71367231-71367250 None:intergenic 60.0%
! AACTTTGGGGGCTGGGGGTA+GGG - chr2.1:71367230-71367249 None:intergenic 60.0%
! CTAGCTTGCGGGGACCTTAC+TGG + chr2.1:71371168-71371187 MS.gene047576:CDS 60.0%
! GCCGACCTTGTTGTGTGCGA+TGG + chr2.1:71368934-71368953 MS.gene047576:CDS 60.0%
! TATGTGCTGCTCCAGGCAGC+TGG + chr2.1:71366671-71366690 MS.gene047576:CDS 60.0%
TGCTCCAGGCAGCTGGAGTC+AGG + chr2.1:71366678-71366697 MS.gene047576:CDS 65.0%
! ACTTTGGGGGCTGGGGGTAG+GGG - chr2.1:71367229-71367248 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr2.1 gene 71366237 71371359 71366237 ID=MS.gene047576
chr2.1 mRNA 71366237 71371359 71366237 ID=MS.gene047576.t1;Parent=MS.gene047576
chr2.1 exon 71366237 71366263 71366237 ID=MS.gene047576.t1.exon1;Parent=MS.gene047576.t1
chr2.1 CDS 71366237 71366263 71366237 ID=cds.MS.gene047576.t1;Parent=MS.gene047576.t1
chr2.1 exon 71366350 71366443 71366350 ID=MS.gene047576.t1.exon2;Parent=MS.gene047576.t1
chr2.1 CDS 71366350 71366443 71366350 ID=cds.MS.gene047576.t1;Parent=MS.gene047576.t1
chr2.1 exon 71366650 71366699 71366650 ID=MS.gene047576.t1.exon3;Parent=MS.gene047576.t1
chr2.1 CDS 71366650 71366699 71366650 ID=cds.MS.gene047576.t1;Parent=MS.gene047576.t1
chr2.1 exon 71367617 71367666 71367617 ID=MS.gene047576.t1.exon4;Parent=MS.gene047576.t1
chr2.1 CDS 71367617 71367666 71367617 ID=cds.MS.gene047576.t1;Parent=MS.gene047576.t1
chr2.1 exon 71368107 71368215 71368107 ID=MS.gene047576.t1.exon5;Parent=MS.gene047576.t1
chr2.1 CDS 71368107 71368215 71368107 ID=cds.MS.gene047576.t1;Parent=MS.gene047576.t1
chr2.1 exon 71368907 71368967 71368907 ID=MS.gene047576.t1.exon6;Parent=MS.gene047576.t1
chr2.1 CDS 71368907 71368967 71368907 ID=cds.MS.gene047576.t1;Parent=MS.gene047576.t1
chr2.1 exon 71369198 71369250 71369198 ID=MS.gene047576.t1.exon7;Parent=MS.gene047576.t1
chr2.1 CDS 71369198 71369250 71369198 ID=cds.MS.gene047576.t1;Parent=MS.gene047576.t1
chr2.1 exon 71369594 71369686 71369594 ID=MS.gene047576.t1.exon8;Parent=MS.gene047576.t1
chr2.1 CDS 71369594 71369686 71369594 ID=cds.MS.gene047576.t1;Parent=MS.gene047576.t1
chr2.1 exon 71370318 71370381 71370318 ID=MS.gene047576.t1.exon9;Parent=MS.gene047576.t1
chr2.1 CDS 71370318 71370381 71370318 ID=cds.MS.gene047576.t1;Parent=MS.gene047576.t1
chr2.1 exon 71370740 71370847 71370740 ID=MS.gene047576.t1.exon10;Parent=MS.gene047576.t1
chr2.1 CDS 71370740 71370847 71370740 ID=cds.MS.gene047576.t1;Parent=MS.gene047576.t1
chr2.1 exon 71371118 71371359 71371118 ID=MS.gene047576.t1.exon11;Parent=MS.gene047576.t1
chr2.1 CDS 71371118 71371359 71371118 ID=cds.MS.gene047576.t1;Parent=MS.gene047576.t1
Gene Sequence

>MS.gene047576

ATGGGCAAAGCTTCAAGGGATAAGAGGGTATGGTTGATTTAACTCTCGCACTGTTCTTTTTTTTTTGGTTGGTTTTTTGGGGTTGATTTGATGTTAGCTAAATTGGTTTGCAGGATATATATTACCGAAAAGCGAAAGAAGAAGGTTGGCGTGCTCGAAGTGCTTTTAAACTTCTTCAGATAGATGAAGAATTTAACATTTTTGAAGGTGCACATTCTCAACCTTGAAATCTGATTTTAATTATTACGAGTTTGTTGCATTTATTTTTGCCATTTTTAGCAGAGATAGTAATGCTCTCTTTCCTGAATATATAATTAGAGATAGTAGTTAATGTCTCAGAAATAGTGAAAGGTTCTTGCTAGCATTTTGTTCCACTGTATTACTTATAGTTTCAATTTCGTTCTTTTTTGCAGGGGTGAAACGTGTTGTAGATTTATGTGCTGCTCCAGGCAGCTGGAGTCAGGTACTGGTGATAAAATTATCATTACCATTCTCTTGTACTTCTTCTCAGAAATCAAAAGTAGCTTCAATTACCAAACACAAACTATGGCGCTTTGTGCTGAAAAGCATTAATAAGAAACCGTAATGTCAATGAGGGGATTGGCTCACCTAGTATCATTTAAATGTAATTGACATGAATATCTTGGTTTAGATTTCTTCTGGTTATCCTTCATTGATAGGTTGTCTATGAGCTTTCACTGTGAGACATGTCTATGCTCTATATTCATAATCGACTAACCCCCCTTCCTCTTAAACTTATCTTAAGAATAGACCTGTATAGTACTCCTTTGTGTTGTGATATCAGTTAATGATTTTGTCTTTTCTCTTCTGCTTCATTATTTCATAATCGTCCTAAAATATAATTCACTTTAAGGAAGGATTTGAATTTAAACCTAGAGGTCATTATCATTGTTTGAAGACATAACTCAATGATTTCTCGTGCTGTTGCAAATGTCAACAACACATTTGACCAGTACAGAATGTTAGTTCCCCTACCCCCAGCCCCCAAAGTTTTCATTTATATAAAATACAGTAACATATTGTTTGCCTCACTAATGCAAATGAAGGAGGCAGAATGCACCTGAAAATCCAGTTGTACTAGAAACCACTTGTTTCTTAGAAATAGTCTAACTATTAACAGACCTGGTCATAGTATACGACCCATCAAAAATCATTTGCTGTTTTGCTAAAAAAGATAACACCATTACGGATGAAAACCAAATCAGACTTAGGTATGAATTATCTACGACAGAATACGACACAAGTTTAAAGTTATTGCCATGTATAAACAATAGGGGGGAAAAACAAGATAAAGCATTCATAAATCTCATGTTGCAGCTATCTTGATATCCAGATAATACTTTAAAAATTTATATGCAGGTTTTGAGTCGTAAACTGTACCTTCCAGCCAAGCTTGCACCTGATGCAAAGTAAGTTTTCCATGGAGATTATATGCTTTGTTTAGATCCATGACATTGAGATCTCACATCCTGTAAATGCATTCATTGACATAGGATTGAAATTACGCTCATTAAAACTATAGTATCCTTTTATGTTGGTCGTAATTATGTTCAATTCATAACTTTTTATTATTGTTCTTACAAAAGAAGTATTTCATTAAGCTTTCCCTGATATGTGTTATGTGAGGTGCAATCTCTGAATTAGTTCCTCATCCTTTTAAACATTGTTTTCTTCCTGTTTTCTTTTGAATTTATTGATTTCTTCTTTTTATTGATTTCTTCTTTTTTGTTTATGCTGTATTATCTTATGTTAAGGAGTATCCTTCACATTCCAAACACTCTGTTAATTATCACATATTATCTCTGTCTCTATCAATATCGTTAATTCCTTGCTGCATCATGATATGCAGGGATGAAAAGCTTCCTCTTATTGTAGCTATTGATTTGCAGCCAATGGCTCCGATTGAAGGTGTTATCCAGGTGCAGGGTGATATAACTAATGCTCGGACTGCTGAAGTGGTATGTACAGAAGTGTTACCTTCAATTCTGTTGACAGATGTCATGTTTTTTCCCCCATTTCGAAACACGATTTGAGTATGCCACTCTTGTCATTAGAATTAGAAAATGATATCAATTCTTTTGTTTATCTAAACTCTATTCCTCAAGTTCATTCATCATGAGATCAAGTTCATTAGCAATTTAGATTTATTAGAACATGAGTACGCATTACTAGCTTTATTTGATATAATTGTTTCTGCTCTAAAATTTATGGTAGAACTTAATGACATCATTTGATTTATGTATCCACCCCGACCTAGTGGAAAAAGGTTTTTGTTATTATTTCTCCTCTGTCGAATTTCAACCACATATTTCTGCTTTCTTTTGCTATACCTTAATTTCTTTTTCTTTTTTCCAATTGCTTTTGTTCAGTTCATGTTTGTGTGAGAATGAATGAATGAGTGAAATAATGAAAAGACATGGTGTGGTCATATGAAAAGTTAAATTCCTGCATTATAAAGTCTAGCCAATTCATGTGTATAGTTTGACATATATAAGTATGTTTCCTGTTGCTCCAAATTGATCCTTTGGTGATGTCGTTTTGGTTTGTTGGAACTTGGAAGGATCATATAGGTCTTGCTTTTTTGAGGCTGCTTTATCTCATCAGTTTAACTCTCTTTGATACAACATTGTTTTCTCTTGTTCTGTTCAGGTCATTAGACATTTTGATGGTTGCAAGGCCGACCTTGTTGTGTGCGATGGTGCTCCTGATGGTAAAGAAAATGCATAATTTAAATTCGTAACTTCTCGATACATAATATTTACCAAACAGCTACAAATGATTTGATACTGTTTGTTTTACCCTCAACCTCTTTCATCGGACCAACGAGAATAAATTTATCCCTTTTTTGTTGCTCCATGTCAATTCTAATACATTAACTCTGATATGTAGGCTTTTTCTCATTTTGGTTGTAGTTTAAAAATTTGGCTTCATTTTTTGCAGTTACCGGACTTCATGACATGGATGAATTTGTTCAATCCCAACTCATACTTGCAGTAAGCACTTAATAACTGTCATTATTATTATTGTAACTATTTATCTCTTTTAGGTTTGCTATCTTGATGCTTGATAGTTGATATTTCATTATGGTTACCTTTTGGCGATCGCAAAAAATATTGAAGGCTAGAAATCAGTGACCTCACCTTTAATAGACATATGCTTGTTATTTCCAGTCAGTCTACTACCTTATCTAATCTAATAAATGCGCACACACCAGTGCGTGGTGTATAGTTTAATTTAAACGGACTATTCCTTGATTTGCGTAGAGTTTCATGATTTTATTTGTCTATCTTGTTAGATTTTTGTCGCAGATTGATGCTAATTACTTACTTCTTGCAGGGGTTAACAATTGTTACTCATGTACTGAAGGAAGGAGGGAAGTTCATTGCGAAGATATTTAGAGGAAAGGACACAAGCCTTCTATACTGTCAGGTATTTGAAGTTTCCCCTCGCCATTAAGATTTCAGGAATTGGATACCTACACATTGTTTGAAATAGCATAAGTATATTTTGCTTTTATCTGTTGCAGTTGTCCACCTTTTAGTTAGCTTTTATAACTTCTGTAATAAAGTGACACTCATTTCTGGAAATAAATTATGGTTAAACAGAGAATGAAAGTTCCAAACCTTTGAAAACATTGGAAGTAATACAAATACCACTACGACTTCTAACTTTGAAAGTTAAATCATCTAAAAGATCCAGAGTTTTACCAAAATTCGGAACAGAAACAATGAGCCAATTGGTTGACAAAATAATTGACTTTAAAGGTAAATGAAAGCCTACTCTCTTGATAAATACAACAAGTGCACCAACAAGTGCACCTGTAGGAGTTAAAATATAACTTTTCTGAACTGATTATTTCACTTGTAGCGTGCTTTTGTTTGGTTGGAACTTAGAACCTACTCATGATCATATCTAAATTTTTCGTTGTACTTGTGAAATTGTTTTGTTGTTGTACTTTCTGCTAAATAACTCATAATAAAGGGGAAAATGGTAAAGGTGTATCATAGTCCTTGAATCCAAAAATCATAATTCCATATACTAAGTTGCTTTTTGTTTGCAGCTAAAATTGTTTTTCCCTGTGGTGACTTTTGCAAAGCCAAAAAGTAGTCGTAATTCCAGCATAGGTAAGAACTTTAGTTTCCTTGTTTGTTACTATTTTTTTTTTTCAAAGCATACTTTTTCAGCTCTTTATAGTTTCTTTATGAATTGTTATGGAAACATTTTCCATAGCTTAGTAATTGGTAGTTATGCTACTCATTATATGTAACAGAAGCTTATCTATTATCTGACAATGTATATGAACTTTGAATATACCACTAGTTGAATTTAGCTGTTTCCCTTGTGCCTCCAAACACTTGCAATTATTAGATTTGAATCTTTAACGGCAATTACTAGTTATGAATCTTTTGACGAGGTGGTTTAAAATGGTAGGAAGGCGGGTGTATACTATTTGTGCTAATTCTTAGTTGTTCACCCTTGCAGAGGCATTTGCAGTTTGTGAAAATTACTCCCCTCCAGAAGGATTCAATCCAAAAGATCTTCATCGGCTTCTTGAGAAGGTTGGAAGTCCATCAGGGGTAGATGATACAGGTATATGTCGGTCCTTATAGAAATTCTTAAGAGCAATCGCAGAATAAAAATGAATTCAGCTTCAAAGTTGCATCCCTGAATGGAAATGAATTCAGCTTCAAAATTGTATCCCTACATGTAGATTGTTAATCATCATATTTTTTTTTTTTTGACTCGTTAATCATCATAACTTGAGATATACTAATTATTTGTTTTTTGAATTTAATTGAATCATGTATACTTAATTTTCATGGCCTTGATGTGGAGTAATTAATGCATTTGAGTTTGCAGATTGTGTTAGTGGGTGGTTGGAAGGCCCTAATAAGGTGTATATCCCATTTCTAGCTTGCGGGGACCTTACTGGATATGATTCTGATAGGTCATATCCACTGCCTAAAGTTGCTGGGGGAACATATCAGAGCTTGGATCCAGTACAACCTCCTATTGCCCCCCCTTACAAGAGAGCTCTAGAGTTAAAAAAAGCATCAACTCAAGGATTCCGAGAACTTGAAAATCTCTCCCTGGATTCCTGA
Protein sequence

>MS.gene047576.t1

MGKASRDKRDIYYRKAKEEGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLAPDAKDEKLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTIVTHVLKEGGKFIAKIFRGKDTSLLYCQLKLFFPVVTFAKPKSSRNSSIEAFAVCENYSPPEGFNPKDLHRLLEKVGSPSGVDDTDCVSGWLEGPNKVYIPFLACGDLTGYDSDRSYPLPKVAGGTYQSLDPVQPPIAPPYKRALELKKASTQGFRELENLSLDS