Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050621.t1 | XP_003626533.1 | 100 | 241 | 0 | 0 | 1 | 241 | 1 | 241 | 1.20E-128 | 469.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050621.t1 | Q9SP08 | 80.6 | 242 | 45 | 2 | 1 | 241 | 1 | 241 | 3.6e-102 | 372.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050621.t1 | G7L401 | 100.0 | 241 | 0 | 0 | 1 | 241 | 1 | 241 | 8.5e-129 | 469.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050621 | MS.gene071460 | 0.807918 | 4.00E-50 | -1.69E-46 |
| MS.gene050621 | MS.gene22822 | 0.948835 | 4.28E-107 | -1.69E-46 |
| MS.gene050621 | MS.gene36543 | 0.800925 | 1.15E-48 | -1.69E-46 |
| MS.gene050621 | MS.gene36993 | 0.806739 | 7.11E-50 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050621.t1 | MTR_7g116920 | 100.000 | 241 | 0 | 0 | 1 | 241 | 1 | 241 | 6.77e-180 | 493 |
| MS.gene050621.t1 | MTR_7g116920 | 100.000 | 223 | 0 | 0 | 19 | 241 | 1 | 223 | 1.92e-165 | 456 |
| MS.gene050621.t1 | MTR_3g072850 | 64.315 | 241 | 10 | 3 | 1 | 241 | 1 | 165 | 5.71e-93 | 270 |
| MS.gene050621.t1 | MTR_4g058720 | 32.432 | 222 | 145 | 3 | 10 | 231 | 33 | 249 | 1.79e-30 | 114 |
| MS.gene050621.t1 | MTR_7g076910 | 29.947 | 187 | 113 | 5 | 10 | 188 | 5 | 181 | 8.50e-20 | 85.5 |
| MS.gene050621.t1 | MTR_7g086640 | 25.714 | 245 | 163 | 6 | 8 | 235 | 443 | 685 | 8.18e-13 | 67.8 |
| MS.gene050621.t1 | MTR_6g005460 | 27.126 | 247 | 158 | 7 | 7 | 234 | 353 | 596 | 9.69e-13 | 67.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050621.t1 | AT3G61620 | 80.579 | 242 | 45 | 2 | 1 | 241 | 1 | 241 | 2.37e-141 | 395 |
| MS.gene050621.t1 | AT3G61620 | 80.579 | 242 | 45 | 2 | 1 | 241 | 1 | 241 | 2.37e-141 | 395 |
| MS.gene050621.t1 | AT4G27490 | 30.594 | 219 | 147 | 3 | 10 | 228 | 34 | 247 | 8.58e-27 | 104 |
| MS.gene050621.t1 | AT4G27490 | 30.594 | 219 | 147 | 3 | 10 | 228 | 34 | 247 | 8.58e-27 | 104 |
| MS.gene050621.t1 | AT4G27490 | 30.594 | 219 | 147 | 3 | 10 | 228 | 34 | 247 | 8.58e-27 | 104 |
| MS.gene050621.t1 | AT4G27490 | 30.392 | 204 | 137 | 3 | 25 | 228 | 7 | 205 | 9.47e-25 | 97.8 |
| MS.gene050621.t1 | AT4G27490 | 38.514 | 148 | 86 | 3 | 10 | 157 | 34 | 176 | 1.39e-24 | 97.1 |
| MS.gene050621.t1 | AT4G27490 | 38.514 | 148 | 86 | 3 | 10 | 157 | 34 | 176 | 1.39e-24 | 97.1 |
| MS.gene050621.t1 | AT4G27490 | 38.514 | 148 | 86 | 3 | 10 | 157 | 34 | 176 | 1.39e-24 | 97.1 |
| MS.gene050621.t1 | AT3G46210 | 30.366 | 191 | 107 | 7 | 10 | 188 | 5 | 181 | 3.15e-18 | 81.3 |
| MS.gene050621.t1 | AT3G46210 | 30.366 | 191 | 107 | 7 | 10 | 188 | 5 | 181 | 3.15e-18 | 81.3 |
| MS.gene050621.t1 | AT3G46210 | 30.366 | 191 | 107 | 7 | 10 | 188 | 5 | 181 | 3.15e-18 | 81.3 |
| MS.gene050621.t1 | AT3G46210 | 30.366 | 191 | 107 | 7 | 10 | 188 | 5 | 181 | 3.15e-18 | 81.3 |
| MS.gene050621.t1 | AT3G46210 | 30.366 | 191 | 107 | 7 | 10 | 188 | 5 | 181 | 3.15e-18 | 81.3 |
| MS.gene050621.t1 | AT3G46210 | 30.366 | 191 | 107 | 7 | 10 | 188 | 5 | 181 | 3.15e-18 | 81.3 |
| MS.gene050621.t1 | AT3G46210 | 30.366 | 191 | 107 | 7 | 10 | 188 | 5 | 181 | 3.15e-18 | 81.3 |
Find 69 sgRNAs with CRISPR-Local
Find 272 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAGTCATTGCTGCTGTTTA+TGG | 0.176064 | 7.3:+1246282 | MS.gene050621:CDS |
| CCATCAGAGCGAAGTCCTTC+TGG | 0.228152 | 7.3:-1245984 | None:intergenic |
| TAAACTACCAATTGATATAT+TGG | 0.234288 | 7.3:+1249648 | MS.gene050621:CDS |
| ATATATTTCAGGTGCAAAAT+AGG | 0.283714 | 7.3:+1246462 | MS.gene050621:intron |
| TCGAATAACCAGAGAAATTT+CGG | 0.285988 | 7.3:-1247861 | None:intergenic |
| CTCCATCTGCTTGGAGAACT+TGG | 0.292775 | 7.3:-1248035 | None:intergenic |
| AGATAAAGTGACCCTTCTTC+AGG | 0.347749 | 7.3:+1248542 | MS.gene050621:CDS |
| GAGCCTTGTCGCTCATTTGT+TGG | 0.363291 | 7.3:-1246487 | None:intergenic |
| TTGTATAAATGCTGCAACTT+TGG | 0.382650 | 7.3:+1248235 | MS.gene050621:CDS |
| ACTTTGGCCCTAGCTGATGC+TGG | 0.384721 | 7.3:+1248251 | MS.gene050621:CDS |
| CTGTAATAGAACCTGGGAAC+GGG | 0.405803 | 7.3:-1247921 | None:intergenic |
| ATTGGAAAATGTTATGCAAC+TGG | 0.415824 | 7.3:+1249666 | MS.gene050621:CDS |
| AGAACTAACCTGTCGCCCTT+TGG | 0.422174 | 7.3:-1246675 | None:intergenic |
| CTCTGATGGTCGCCGACCCA+TGG | 0.452782 | 7.3:+1245998 | MS.gene050621:CDS |
| AGGGTCACTTTATCTAACTT+TGG | 0.454499 | 7.3:-1248534 | None:intergenic |
| ACATTTAATGCCCCGTTCCC+AGG | 0.456965 | 7.3:+1247910 | MS.gene050621:CDS |
| GGAGAAAATTTACCTGAAGA+AGG | 0.462062 | 7.3:-1248554 | None:intergenic |
| CTTGTAACTTCCTGTAGTGC+TGG | 0.463780 | 7.3:+1248290 | MS.gene050621:CDS |
| CGACAAATTCGAGCAGAGAT+TGG | 0.468538 | 7.3:+1246127 | MS.gene050621:CDS |
| CAAGCAGAGGGGTGCTATTG+AGG | 0.468802 | 7.3:-1248316 | None:intergenic |
| CATCAGAGCGAAGTCCTTCT+GGG | 0.469663 | 7.3:-1245983 | None:intergenic |
| TGATTGTAAAGTACCTCTCT+AGG | 0.473493 | 7.3:-1246306 | None:intergenic |
| GGGAAACGGCAGTACTTCCA+TGG | 0.478515 | 7.3:-1246015 | None:intergenic |
| AAGTATCTACCCATCAGCTT+TGG | 0.481023 | 7.3:-1246158 | None:intergenic |
| GAGATCAACCGAAATTTCTC+TGG | 0.484302 | 7.3:+1247853 | MS.gene050621:CDS |
| ACAAATGAGCGACAAGGCTC+TGG | 0.488464 | 7.3:+1246490 | MS.gene050621:CDS |
| AAATGTTATGCAACTGGCTA+CGG | 0.489876 | 7.3:+1249672 | MS.gene050621:CDS |
| ATTGAGGTATCCAGCACTAC+AGG | 0.490303 | 7.3:-1248300 | None:intergenic |
| AACTATGTAGAAGACAGTGC+TGG | 0.505585 | 7.3:+1248483 | MS.gene050621:CDS |
| CTCAATAGCACCCCTCTGCT+TGG | 0.505964 | 7.3:+1248317 | MS.gene050621:CDS |
| CCAGAAGGACTTCGCTCTGA+TGG | 0.509153 | 7.3:+1245984 | MS.gene050621:CDS |
| TGTCAATATGCATTCTTCCA+TGG | 0.513511 | 7.3:-1247888 | None:intergenic |
| TGAGGAAACCAAAGGGCGAC+AGG | 0.514912 | 7.3:+1246667 | MS.gene050621:CDS |
| ATGAATTACCTCCATCTGCT+TGG | 0.515754 | 7.3:-1248044 | None:intergenic |
| CTTTGGCCCTAGCTGATGCT+GGG | 0.520390 | 7.3:+1248252 | MS.gene050621:CDS |
| ATGGAGTACGTCAGCCCAGA+AGG | 0.521251 | 7.3:+1245969 | MS.gene050621:CDS |
| GAGAAAATTTACCTGAAGAA+GGG | 0.526816 | 7.3:-1248553 | None:intergenic |
| ATAAACAGCAGCAATGACTT+TGG | 0.529559 | 7.3:-1246280 | None:intergenic |
| TAGGGATCCCAGCATCAGCT+AGG | 0.534689 | 7.3:-1248259 | None:intergenic |
| AGAATTCCTACAGTTACATC+AGG | 0.541883 | 7.3:-1248510 | None:intergenic |
| ACTATGTAGAAGACAGTGCT+GGG | 0.550161 | 7.3:+1248484 | MS.gene050621:CDS |
| ACATATACATACCAAGCAGA+GGG | 0.554010 | 7.3:-1248328 | None:intergenic |
| CAAAGCAACTTGAGTATCGA+AGG | 0.554974 | 7.3:+1249843 | MS.gene050621:CDS |
| TCTGGTTATTCGACAAACCA+TGG | 0.564931 | 7.3:+1247871 | MS.gene050621:CDS |
| GTCCAAGTTCTCCAAGCAGA+TGG | 0.566076 | 7.3:+1248033 | MS.gene050621:CDS |
| GAAGTTACAAGATCAAGCAT+AGG | 0.570197 | 7.3:-1248278 | None:intergenic |
| TGCTGTTTATGGCCCTAGAG+AGG | 0.572655 | 7.3:+1246293 | MS.gene050621:CDS |
| AAGTTACAAGATCAAGCATA+GGG | 0.574925 | 7.3:-1248277 | None:intergenic |
| GGTGCTGTATCCAAAGCTGA+TGG | 0.593433 | 7.3:+1246148 | MS.gene050621:CDS |
| GATTGTAAAGTACCTCTCTA+GGG | 0.598153 | 7.3:-1246305 | None:intergenic |
| AGGGATCCCAGCATCAGCTA+GGG | 0.609353 | 7.3:-1248258 | None:intergenic |
| TTAGCACTGGTGATCGCATG+AGG | 0.609477 | 7.3:+1246649 | MS.gene050621:CDS |
| TGATCGCATGAGGAAACCAA+AGG | 0.616278 | 7.3:+1246659 | MS.gene050621:CDS |
| GTTATGCAACTGGCTACGGA+AGG | 0.624056 | 7.3:+1249676 | MS.gene050621:CDS |
| GATCGCATGAGGAAACCAAA+GGG | 0.624431 | 7.3:+1246660 | MS.gene050621:CDS |
| AAAGCAACTTGAGTATCGAA+GGG | 0.626931 | 7.3:+1249844 | MS.gene050621:CDS |
| TGTAATAGAACCTGGGAACG+GGG | 0.631568 | 7.3:-1247920 | None:intergenic |
| AACATATACATACCAAGCAG+AGG | 0.636947 | 7.3:-1248329 | None:intergenic |
| GGAAACGGCAGTACTTCCAT+GGG | 0.641941 | 7.3:-1246014 | None:intergenic |
| CAAGTTCTCCAAGCAGATGG+AGG | 0.646436 | 7.3:+1248036 | MS.gene050621:CDS |
| ACGGCAGTACTTCCATGGGT+CGG | 0.660183 | 7.3:-1246010 | None:intergenic |
| GTGCTGTATCCAAAGCTGAT+GGG | 0.661709 | 7.3:+1246149 | MS.gene050621:CDS |
| ACTGTAATAGAACCTGGGAA+CGG | 0.668397 | 7.3:-1247922 | None:intergenic |
| TATGTAGAAGACAGTGCTGG+GGG | 0.668530 | 7.3:+1248486 | MS.gene050621:CDS |
| CTATGTAGAAGACAGTGCTG+GGG | 0.678097 | 7.3:+1248485 | MS.gene050621:CDS |
| GGTTCGATGTGAATACAGCA+TGG | 0.680697 | 7.3:+1246620 | MS.gene050621:intron |
| GAGCCAACAAATGAGCGACA+AGG | 0.687086 | 7.3:+1246484 | MS.gene050621:CDS |
| AAGCAACTTGAGTATCGAAG+GGG | 0.706304 | 7.3:+1249845 | MS.gene050621:CDS |
| CATATACATACCAAGCAGAG+GGG | 0.742316 | 7.3:-1248327 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGTTATAATATAATACATT+GGG | + | chr7.3:1246528-1246547 | MS.gene050621:intron | 10.0% |
| !! | TAAGTTATAATATAATACAT+TGG | + | chr7.3:1246527-1246546 | MS.gene050621:intron | 10.0% |
| !! | TACAATGATTAAAAAAAATA+AGG | - | chr7.3:1247955-1247974 | None:intergenic | 10.0% |
| !!! | CTAAATTTATATATTTTCTA+TGG | + | chr7.3:1246365-1246384 | MS.gene050621:intron | 10.0% |
| !! | AAAAAAAATCTGTTAATTGT+TGG | + | chr7.3:1248137-1248156 | MS.gene050621:intron | 15.0% |
| !! | AAGAAAATAAAATATGTTGT+TGG | - | chr7.3:1249236-1249255 | None:intergenic | 15.0% |
| !! | AATAAAATAACAAGATGAAA+AGG | - | chr7.3:1248093-1248112 | None:intergenic | 15.0% |
| !! | GTTTAAAAAAGTAAAACAAA+AGG | - | chr7.3:1249012-1249031 | None:intergenic | 15.0% |
| !! | TATAGAAGATACTATAAAAA+CGG | - | chr7.3:1246445-1246464 | None:intergenic | 15.0% |
| !!! | ATCAATTTTCCAATTTTTTT+CGG | + | chr7.3:1247674-1247693 | MS.gene050621:intron | 15.0% |
| !!! | TTTACTTTATTTTTGGATTA+GGG | + | chr7.3:1249571-1249590 | MS.gene050621:intron | 15.0% |
| !!! | TTTTACTTTATTTTTGGATT+AGG | + | chr7.3:1249570-1249589 | MS.gene050621:intron | 15.0% |
| !! | AATTGGAGAAAAGAAAAAAA+GGG | - | chr7.3:1246040-1246059 | None:intergenic | 20.0% |
| !! | ACTATATCAATTAAGTATGA+AGG | - | chr7.3:1246744-1246763 | None:intergenic | 20.0% |
| !! | ATATATAAGAAACAAACAAG+AGG | - | chr7.3:1247807-1247826 | None:intergenic | 20.0% |
| !! | ATATCAGAAAGAAAATGAAT+TGG | - | chr7.3:1246057-1246076 | None:intergenic | 20.0% |
| !! | TAAACTACCAATTGATATAT+TGG | + | chr7.3:1249648-1249667 | MS.gene050621:CDS | 20.0% |
| !! | TAGTATCTTCTATATATTTC+AGG | + | chr7.3:1246451-1246470 | MS.gene050621:intron | 20.0% |
| !! | TGATTAAAAAAAATAAGGTC+CGG | - | chr7.3:1247950-1247969 | None:intergenic | 20.0% |
| !! | TTAGAATATCAGTCTAAATT+CGG | - | chr7.3:1249283-1249302 | None:intergenic | 20.0% |
| !! | TTGATATAGTAGTAAAAACA+TGG | + | chr7.3:1249755-1249774 | MS.gene050621:intron | 20.0% |
| !! | TTTGATGAACATTATTGATA+GGG | + | chr7.3:1249086-1249105 | MS.gene050621:intron | 20.0% |
| !!! | ACATTTTCCAATATATCAAT+TGG | - | chr7.3:1249658-1249677 | None:intergenic | 20.0% |
| !!! | ACTATAACATATTTTGTTGA+AGG | + | chr7.3:1249418-1249437 | MS.gene050621:intron | 20.0% |
| !!! | ATTTTCTTTTTGCAATGATT+TGG | + | chr7.3:1247983-1248002 | MS.gene050621:intron | 20.0% |
| !!! | ATTTTGTTATTTACTGTAGA+TGG | + | chr7.3:1249621-1249640 | MS.gene050621:intron | 20.0% |
| !!! | GTATTTACCTTTTTTTATAG+AGG | + | chr7.3:1248710-1248729 | MS.gene050621:intron | 20.0% |
| !!! | TTACTTTATTTTTGGATTAG+GGG | + | chr7.3:1249572-1249591 | MS.gene050621:intron | 20.0% |
| !!! | TTTTGATGAACATTATTGAT+AGG | + | chr7.3:1249085-1249104 | MS.gene050621:intron | 20.0% |
| ! | AAAAATCTACCTTATCTACA+AGG | - | chr7.3:1247350-1247369 | None:intergenic | 25.0% |
| ! | AAAATTACAATGAAAGAGAC+TGG | - | chr7.3:1249464-1249483 | None:intergenic | 25.0% |
| ! | AATGTTCATCAAAAGCAAAA+TGG | - | chr7.3:1249046-1249065 | None:intergenic | 25.0% |
| ! | AGAGAAGTTAAGTAGTTTAA+AGG | + | chr7.3:1247469-1247488 | MS.gene050621:intron | 25.0% |
| ! | AGATAAGTTAACTAGTTACA+AGG | + | chr7.3:1247417-1247436 | MS.gene050621:intron | 25.0% |
| ! | ATTAACGGTTTATTGGAAAT+AGG | + | chr7.3:1247220-1247239 | MS.gene050621:intron | 25.0% |
| ! | ATTGGAGAAAAGAAAAAAAG+GGG | - | chr7.3:1246039-1246058 | None:intergenic | 25.0% |
| ! | GAATTGGAGAAAAGAAAAAA+AGG | - | chr7.3:1246041-1246060 | None:intergenic | 25.0% |
| ! | GAGAAGTTAAGTAGTTTAAA+GGG | + | chr7.3:1247470-1247489 | MS.gene050621:intron | 25.0% |
| ! | GATAAGTTAACTAGTTACAA+GGG | + | chr7.3:1247418-1247437 | MS.gene050621:intron | 25.0% |
| ! | GTTTATATATGTTTGTAACC+TGG | + | chr7.3:1248623-1248642 | MS.gene050621:intron | 25.0% |
| ! | TAAAGAGGAGAAAAAAAAGA+TGG | - | chr7.3:1246093-1246112 | None:intergenic | 25.0% |
| ! | TCATTCAGAGTTTATTAGAT+TGG | + | chr7.3:1247742-1247761 | MS.gene050621:intron | 25.0% |
| ! | TGGAAATATTAACGGTTTAT+TGG | + | chr7.3:1247213-1247232 | MS.gene050621:intron | 25.0% |
| ! | TGTCAATCAATGAAGAAATT+AGG | - | chr7.3:1249806-1249825 | None:intergenic | 25.0% |
| !! | ATATATTTCAGGTGCAAAAT+AGG | + | chr7.3:1246462-1246481 | MS.gene050621:intron | 25.0% |
| !! | TCTAAAGATGAGAACAATTT+TGG | - | chr7.3:1248825-1248844 | None:intergenic | 25.0% |
| !! | TGTAGATAAGGTAGATTTTT+GGG | + | chr7.3:1247350-1247369 | MS.gene050621:intron | 25.0% |
| !! | TTGGTATGTATATGTTTTAC+TGG | + | chr7.3:1248336-1248355 | MS.gene050621:intron | 25.0% |
| !! | TTGTAGATAAGGTAGATTTT+TGG | + | chr7.3:1247349-1247368 | MS.gene050621:intron | 25.0% |
| !! | TTGTTGGCAATATTTAAAAC+AGG | + | chr7.3:1248153-1248172 | MS.gene050621:intron | 25.0% |
| !!! | GTTTTACTGGAAATTTTAAC+TGG | + | chr7.3:1248349-1248368 | MS.gene050621:intron | 25.0% |
| !!! | TGTGGCTTTTACTTTATTTT+TGG | + | chr7.3:1249564-1249583 | MS.gene050621:intron | 25.0% |
| AAAAGAAAAAAAGGGGGAAA+CGG | - | chr7.3:1246032-1246051 | None:intergenic | 30.0% | |
| AAACAACCACTGGATAATAA+AGG | - | chr7.3:1249121-1249140 | None:intergenic | 30.0% | |
| AAGCATATAGTTTGATTGAG+CGG | + | chr7.3:1249529-1249548 | MS.gene050621:intron | 30.0% | |
| AAGTTACAAGATCAAGCATA+GGG | - | chr7.3:1248280-1248299 | None:intergenic | 30.0% | |
| AATACAACAAACACGTGTAT+TGG | - | chr7.3:1247545-1247564 | None:intergenic | 30.0% | |
| AGCTTAGCTGGAAATATTAA+CGG | + | chr7.3:1247205-1247224 | MS.gene050621:intron | 30.0% | |
| AGGAATTAAACTACGATAAG+AGG | + | chr7.3:1246866-1246885 | MS.gene050621:intron | 30.0% | |
| ATAGAGTAGCATATTAAGAG+AGG | + | chr7.3:1247013-1247032 | MS.gene050621:intron | 30.0% | |
| ATCTTAAGAATGAGTCAACA+AGG | - | chr7.3:1249190-1249209 | None:intergenic | 30.0% | |
| ATTGGAAAATGTTATGCAAC+TGG | + | chr7.3:1249666-1249685 | MS.gene050621:CDS | 30.0% | |
| CACAGTGAAAAAGAAGTTTA+AGG | - | chr7.3:1246227-1246246 | None:intergenic | 30.0% | |
| CCTAAAGCCTCTATAAAAAA+AGG | - | chr7.3:1248720-1248739 | None:intergenic | 30.0% | |
| CTGAATGACAAACAAAATGA+GGG | - | chr7.3:1247730-1247749 | None:intergenic | 30.0% | |
| GAGAAAATTTACCTGAAGAA+GGG | - | chr7.3:1248556-1248575 | None:intergenic | 30.0% | |
| GTCAGGAAAGTAAATTAACT+TGG | + | chr7.3:1248591-1248610 | MS.gene050621:intron | 30.0% | |
| TCGAATAACCAGAGAAATTT+CGG | - | chr7.3:1247864-1247883 | None:intergenic | 30.0% | |
| TCTGAATGACAAACAAAATG+AGG | - | chr7.3:1247731-1247750 | None:intergenic | 30.0% | |
| TCTTAAGAATGAGTCAACAA+GGG | - | chr7.3:1249189-1249208 | None:intergenic | 30.0% | |
| TGCACTATAGAGGAAAAAAT+AGG | + | chr7.3:1248881-1248900 | MS.gene050621:intron | 30.0% | |
| TTAAAGGGATATGTACGTAT+AGG | + | chr7.3:1247485-1247504 | MS.gene050621:intron | 30.0% | |
| TTGGAGAAAAGAAAAAAAGG+GGG | - | chr7.3:1246038-1246057 | None:intergenic | 30.0% | |
| TTGTATAAATGCTGCAACTT+TGG | + | chr7.3:1248235-1248254 | MS.gene050621:CDS | 30.0% | |
| TTTATTATCCAGTGGTTGTT+TGG | + | chr7.3:1249120-1249139 | MS.gene050621:intron | 30.0% | |
| ! | AAGATGAGAACAATTTTGGA+AGG | - | chr7.3:1248821-1248840 | None:intergenic | 30.0% |
| ! | GTAGATAAGGTAGATTTTTG+GGG | + | chr7.3:1247351-1247370 | MS.gene050621:intron | 30.0% |
| ! | TATAGTATTGCTGTACTGAT+AGG | + | chr7.3:1246758-1246777 | MS.gene050621:intron | 30.0% |
| ! | TTTTTCTTCTTTCCATGTCT+AGG | + | chr7.3:1246599-1246618 | MS.gene050621:intron | 30.0% |
| !! | CATTGATTGACAGATTTTAC+TGG | + | chr7.3:1249814-1249833 | MS.gene050621:intron | 30.0% |
| !!! | CCTTTTTTTATAGAGGCTTT+AGG | + | chr7.3:1248717-1248736 | MS.gene050621:intron | 30.0% |
| AAAGGTAAATACCTGCAGTA+AGG | - | chr7.3:1248702-1248721 | None:intergenic | 35.0% | |
| AAAGTAAAACAAAAGGTCCC+CGG | - | chr7.3:1249005-1249024 | None:intergenic | 35.0% | |
| AAAGTTCCTTCAAAATCAGC+TGG | - | chr7.3:1247284-1247303 | None:intergenic | 35.0% | |
| AAATGTTATGCAACTGGCTA+CGG | + | chr7.3:1249672-1249691 | MS.gene050621:CDS | 35.0% | |
| AACATATACATACCAAGCAG+AGG | - | chr7.3:1248332-1248351 | None:intergenic | 35.0% | |
| AAGTATGAAGGATCAAGATC+AGG | - | chr7.3:1246732-1246751 | None:intergenic | 35.0% | |
| AATATACAAAGCCGCTATAG+CGG | + | chr7.3:1249311-1249330 | MS.gene050621:intron | 35.0% | |
| ACATATACATACCAAGCAGA+GGG | - | chr7.3:1248331-1248350 | None:intergenic | 35.0% | |
| ACTTTCGATTTAGTACTGCA+TGG | + | chr7.3:1248414-1248433 | MS.gene050621:intron | 35.0% | |
| AGAATTCCTACAGTTACATC+AGG | - | chr7.3:1248513-1248532 | None:intergenic | 35.0% | |
| AGGAGTCAAATCAATACTCT+AGG | - | chr7.3:1248848-1248867 | None:intergenic | 35.0% | |
| AGTTTACATCAGCTAATGCT+CGG | + | chr7.3:1249143-1249162 | MS.gene050621:intron | 35.0% | |
| ATAAACAGCAGCAATGACTT+TGG | - | chr7.3:1246283-1246302 | None:intergenic | 35.0% | |
| ATAACTCCATAATACCCCTA+TGG | + | chr7.3:1248954-1248973 | MS.gene050621:intron | 35.0% | |
| ATACACGAACCTTGTAGATA+AGG | + | chr7.3:1247338-1247357 | MS.gene050621:intron | 35.0% | |
| ATAGTCCTGTTAGAAAGTCA+AGG | + | chr7.3:1248908-1248927 | MS.gene050621:intron | 35.0% | |
| ATGTACGTATAGGAGACATA+AGG | + | chr7.3:1247495-1247514 | MS.gene050621:intron | 35.0% | |
| CGGTGTTTCATAACTTAGAA+TGG | + | chr7.3:1249505-1249524 | MS.gene050621:intron | 35.0% | |
| CTTGAACCTTTATTATCCAG+TGG | + | chr7.3:1249112-1249131 | MS.gene050621:intron | 35.0% | |
| GAAGTTACAAGATCAAGCAT+AGG | - | chr7.3:1248281-1248300 | None:intergenic | 35.0% | |
| GAGATAAGATTCGCTTCTAA+TGG | - | chr7.3:1247601-1247620 | None:intergenic | 35.0% | |
| GGAGAAAATTTACCTGAAGA+AGG | - | chr7.3:1248557-1248576 | None:intergenic | 35.0% | |
| GTTCATCAAAAGCAAAATGG+AGG | - | chr7.3:1249043-1249062 | None:intergenic | 35.0% | |
| GTTGTATTGTGAAAGGACAA+AGG | + | chr7.3:1247557-1247576 | MS.gene050621:intron | 35.0% | |
| GTTTATTATGTCCTTACTGC+AGG | + | chr7.3:1248688-1248707 | MS.gene050621:intron | 35.0% | |
| TAGAAAAGTCTCTAGTTGAG+CGG | + | chr7.3:1247170-1247189 | MS.gene050621:intron | 35.0% | |
| TAGCATATTAAGAGAGGCAA+TGG | + | chr7.3:1247019-1247038 | MS.gene050621:intron | 35.0% | |
| TCCATATTTGTGTTGTAGTC+AGG | + | chr7.3:1248574-1248593 | MS.gene050621:intron | 35.0% | |
| TCCTGACTACAACACAAATA+TGG | - | chr7.3:1248578-1248597 | None:intergenic | 35.0% | |
| TCGTGATGAAATGTAAATGC+TGG | + | chr7.3:1246969-1246988 | MS.gene050621:intron | 35.0% | |
| TCTTGCATACAAACTAGTTG+CGG | + | chr7.3:1249485-1249504 | MS.gene050621:intron | 35.0% | |
| TGAAAGTTGCTGAATGAGTA+TGG | + | chr7.3:1248451-1248470 | MS.gene050621:intron | 35.0% | |
| TGTCAATATGCATTCTTCCA+TGG | - | chr7.3:1247891-1247910 | None:intergenic | 35.0% | |
| ! | AAAGTCATTGCTGCTGTTTA+TGG | + | chr7.3:1246282-1246301 | MS.gene050621:CDS | 35.0% |
| ! | AGGAACTTTTAGCAGAAACA+TGG | + | chr7.3:1247295-1247314 | MS.gene050621:intron | 35.0% |
| ! | AGGGTCACTTTATCTAACTT+TGG | - | chr7.3:1248537-1248556 | None:intergenic | 35.0% |
| ! | GAAGTTTAAGGTGAAATGCA+TGG | - | chr7.3:1246215-1246234 | None:intergenic | 35.0% |
| ! | GATTGTAAAGTACCTCTCTA+GGG | - | chr7.3:1246308-1246327 | None:intergenic | 35.0% |
| ! | GTTCATAACATGCCTTTTGT+AGG | + | chr7.3:1248200-1248219 | MS.gene050621:intron | 35.0% |
| ! | TGATTGTAAAGTACCTCTCT+AGG | - | chr7.3:1246309-1246328 | None:intergenic | 35.0% |
| ! | TTAGATTGGTTGTTCTTGCA+AGG | + | chr7.3:1247756-1247775 | MS.gene050621:intron | 35.0% |
| ! | TTGAAATTTGCTCATGCTAC+AGG | + | chr7.3:1247831-1247850 | MS.gene050621:intron | 35.0% |
| !! | AAAGCAACTTGAGTATCGAA+GGG | + | chr7.3:1249844-1249863 | MS.gene050621:CDS | 35.0% |
| !! | ATGAGAACAATTTTGGAAGG+AGG | - | chr7.3:1248818-1248837 | None:intergenic | 35.0% |
| !! | CATTGAGCACCGAAAAAAAT+TGG | - | chr7.3:1247686-1247705 | None:intergenic | 35.0% |
| !! | CGTGTTTGTTGTATTGTGAA+AGG | + | chr7.3:1247550-1247569 | MS.gene050621:intron | 35.0% |
| !! | TGAGAACAATTTTGGAAGGA+GGG | - | chr7.3:1248817-1248836 | None:intergenic | 35.0% |
| AACTATGTAGAAGACAGTGC+TGG | + | chr7.3:1248483-1248502 | MS.gene050621:CDS | 40.0% | |
| AAGTATCTACCCATCAGCTT+TGG | - | chr7.3:1246161-1246180 | None:intergenic | 40.0% | |
| AAGTGAGAACTGCACTATAG+AGG | + | chr7.3:1248871-1248890 | MS.gene050621:intron | 40.0% | |
| ACAAAATACCCCAGCAGAAA+AGG | - | chr7.3:1246934-1246953 | None:intergenic | 40.0% | |
| ACGTATAGGAGACATAAGGA+TGG | + | chr7.3:1247499-1247518 | MS.gene050621:intron | 40.0% | |
| ACTATGTAGAAGACAGTGCT+GGG | + | chr7.3:1248484-1248503 | MS.gene050621:CDS | 40.0% | |
| ACTGTAATAGAACCTGGGAA+CGG | - | chr7.3:1247925-1247944 | None:intergenic | 40.0% | |
| AGATAAAGTGACCCTTCTTC+AGG | + | chr7.3:1248542-1248561 | MS.gene050621:CDS | 40.0% | |
| AGGTAATTCATGCCTGATAG+TGG | + | chr7.3:1248056-1248075 | MS.gene050621:intron | 40.0% | |
| AGTTGGATCCTTGACAGATA+AGG | - | chr7.3:1247074-1247093 | None:intergenic | 40.0% | |
| ATGAATTACCTCCATCTGCT+TGG | - | chr7.3:1248047-1248066 | None:intergenic | 40.0% | |
| ATTCACATCGAACCTAGACA+TGG | - | chr7.3:1246614-1246633 | None:intergenic | 40.0% | |
| CAAAAGCAAAATGGAGGTCT+AGG | - | chr7.3:1249037-1249056 | None:intergenic | 40.0% | |
| CAAGATCAGGCAAAAAGACT+GGG | - | chr7.3:1246719-1246738 | None:intergenic | 40.0% | |
| CACTACACAATCCATAACCT+AGG | - | chr7.3:1248650-1248669 | None:intergenic | 40.0% | |
| CATATACATACCAAGCAGAG+GGG | - | chr7.3:1248330-1248349 | None:intergenic | 40.0% | |
| CGGTTTATTGGAAATAGGCA+TGG | + | chr7.3:1247225-1247244 | MS.gene050621:intron | 40.0% | |
| CGTATAGGAGACATAAGGAT+GGG | + | chr7.3:1247500-1247519 | MS.gene050621:intron | 40.0% | |
| CTCAATAACATGAGCTTAGC+TGG | + | chr7.3:1247193-1247212 | MS.gene050621:intron | 40.0% | |
| GAGATCAACCGAAATTTCTC+TGG | + | chr7.3:1247853-1247872 | MS.gene050621:CDS | 40.0% | |
| GGCAATTAGCAGTCACATAA+AGG | + | chr7.3:1248775-1248794 | MS.gene050621:intron | 40.0% | |
| GGTAATTCATGCCTGATAGT+GGG | + | chr7.3:1248057-1248076 | MS.gene050621:intron | 40.0% | |
| GTATGCCTTGACTTTCTAAC+AGG | - | chr7.3:1248916-1248935 | None:intergenic | 40.0% | |
| TAGTGCAGTTCTCACTTCAT+AGG | - | chr7.3:1248868-1248887 | None:intergenic | 40.0% | |
| TATGTTTGTAACCTGGTCCT+AGG | + | chr7.3:1248630-1248649 | MS.gene050621:intron | 40.0% | |
| TCAAGATCAGGCAAAAAGAC+TGG | - | chr7.3:1246720-1246739 | None:intergenic | 40.0% | |
| TCTGGTTATTCGACAAACCA+TGG | + | chr7.3:1247871-1247890 | MS.gene050621:CDS | 40.0% | |
| TGTAAACTCCAAACAACCAC+TGG | - | chr7.3:1249131-1249150 | None:intergenic | 40.0% | |
| TTCCTACGTGTGCAAAAAGA+TGG | - | chr7.3:1246851-1246870 | None:intergenic | 40.0% | |
| ! | ACATGCCTTTTGTAGGAACT+AGG | + | chr7.3:1248207-1248226 | MS.gene050621:intron | 40.0% |
| ! | ACGTAAAGCCTTATCTGTCA+AGG | + | chr7.3:1247063-1247082 | MS.gene050621:intron | 40.0% |
| ! | ATTACGTGTTCCTTTTCTGC+TGG | + | chr7.3:1246921-1246940 | MS.gene050621:intron | 40.0% |
| ! | GAATTCTGAGAACCTTACCA+GGG | + | chr7.3:1247257-1247276 | MS.gene050621:intron | 40.0% |
| ! | GCATCTAGGATTGCATAAAG+AGG | - | chr7.3:1246108-1246127 | None:intergenic | 40.0% |
| ! | TGAATTCTGAGAACCTTACC+AGG | + | chr7.3:1247256-1247275 | MS.gene050621:intron | 40.0% |
| ! | TTACGTGTTCCTTTTCTGCT+GGG | + | chr7.3:1246922-1246941 | MS.gene050621:intron | 40.0% |
| ! | TTCCATCTTTTTGCACACGT+AGG | + | chr7.3:1246846-1246865 | MS.gene050621:intron | 40.0% |
| !! | AAGCAACTTGAGTATCGAAG+GGG | + | chr7.3:1249845-1249864 | MS.gene050621:CDS | 40.0% |
| !! | AGCATGGCTAATTTTAGCAC+TGG | + | chr7.3:1246636-1246655 | MS.gene050621:CDS | 40.0% |
| !! | AGCTCTGCAATTTTCGAGAT+GGG | + | chr7.3:1246252-1246271 | MS.gene050621:intron | 40.0% |
| !! | CAAAGCAACTTGAGTATCGA+AGG | + | chr7.3:1249843-1249862 | MS.gene050621:CDS | 40.0% |
| !! | GCATTTCCATAGGGGTATTA+TGG | - | chr7.3:1248963-1248982 | None:intergenic | 40.0% |
| !! | TAAGGTAGATTTTTGGGGAG+TGG | + | chr7.3:1247356-1247375 | MS.gene050621:intron | 40.0% |
| !! | TTCTGCTGGGGTATTTTGTA+AGG | + | chr7.3:1246935-1246954 | MS.gene050621:intron | 40.0% |
| !! | TTTTGGGGAGTGGTATTGTT+AGG | + | chr7.3:1247366-1247385 | MS.gene050621:intron | 40.0% |
| AAGCAAGGTTAGCAGCACTT+TGG | - | chr7.3:1247114-1247133 | None:intergenic | 45.0% | |
| AATAACCCGTCACACAAGCA+AGG | - | chr7.3:1247129-1247148 | None:intergenic | 45.0% | |
| ACAATCCATAACCTAGGACC+AGG | - | chr7.3:1248644-1248663 | None:intergenic | 45.0% | |
| ACATAAGGATGGGAAAGGGA+TGG | + | chr7.3:1247510-1247529 | MS.gene050621:intron | 45.0% | |
| AGGAGACATAAGGATGGGAA+AGG | + | chr7.3:1247505-1247524 | MS.gene050621:intron | 45.0% | |
| CATAAGGATGGGAAAGGGAT+GGG | + | chr7.3:1247511-1247530 | MS.gene050621:intron | 45.0% | |
| CATCTCGAAAATTGCAGAGC+TGG | - | chr7.3:1246253-1246272 | None:intergenic | 45.0% | |
| CCAGGTTCTATTACAGTCTC+CGG | + | chr7.3:1247928-1247947 | MS.gene050621:intron | 45.0% | |
| CGACAAATTCGAGCAGAGAT+TGG | + | chr7.3:1246127-1246146 | MS.gene050621:CDS | 45.0% | |
| CGGAGACTGTAATAGAACCT+GGG | - | chr7.3:1247930-1247949 | None:intergenic | 45.0% | |
| CTATGTAGAAGACAGTGCTG+GGG | + | chr7.3:1248485-1248504 | MS.gene050621:CDS | 45.0% | |
| CTGTAATAGAACCTGGGAAC+GGG | - | chr7.3:1247924-1247943 | None:intergenic | 45.0% | |
| CTTGTAACTTCCTGTAGTGC+TGG | + | chr7.3:1248290-1248309 | MS.gene050621:CDS | 45.0% | |
| GATCACAAGATCCCACTATC+AGG | - | chr7.3:1248071-1248090 | None:intergenic | 45.0% | |
| GATCCAACTCCAAAAAACCC+TGG | + | chr7.3:1247085-1247104 | MS.gene050621:intron | 45.0% | |
| GATCGCATGAGGAAACCAAA+GGG | + | chr7.3:1246660-1246679 | MS.gene050621:CDS | 45.0% | |
| GCAGACCTAGTTCCTACAAA+AGG | - | chr7.3:1248215-1248234 | None:intergenic | 45.0% | |
| GGAGACATAAGGATGGGAAA+GGG | + | chr7.3:1247506-1247525 | MS.gene050621:intron | 45.0% | |
| GGTTCGATGTGAATACAGCA+TGG | + | chr7.3:1246620-1246639 | MS.gene050621:intron | 45.0% | |
| GTGCTGTATCCAAAGCTGAT+GGG | + | chr7.3:1246149-1246168 | MS.gene050621:CDS | 45.0% | |
| TCTCTCTTGCTCTCTGTCAT+TGG | + | chr7.3:1248754-1248773 | MS.gene050621:intron | 45.0% | |
| TGACAGAGAGCAAGAGAGAT+AGG | - | chr7.3:1248753-1248772 | None:intergenic | 45.0% | |
| TGATCGCATGAGGAAACCAA+AGG | + | chr7.3:1246659-1246678 | MS.gene050621:CDS | 45.0% | |
| TGCTAACCTTGCTTGTGTGA+CGG | + | chr7.3:1247120-1247139 | MS.gene050621:intron | 45.0% | |
| TGCTCGAATTTGTCGCATCT+AGG | - | chr7.3:1246122-1246141 | None:intergenic | 45.0% | |
| TGTAACCTGGTCCTAGGTTA+TGG | + | chr7.3:1248636-1248655 | MS.gene050621:intron | 45.0% | |
| TGTAATAGAACCTGGGAACG+GGG | - | chr7.3:1247923-1247942 | None:intergenic | 45.0% | |
| TTGCAAGGTTCCATAACCCT+TGG | + | chr7.3:1247771-1247790 | MS.gene050621:intron | 45.0% | |
| ! | ATTGAGGTATCCAGCACTAC+AGG | - | chr7.3:1248303-1248322 | None:intergenic | 45.0% |
| ! | CTTTTAGCAGAAACATGGCG+AGG | + | chr7.3:1247300-1247319 | MS.gene050621:intron | 45.0% |
| ! | TACGTGTTCCTTTTCTGCTG+GGG | + | chr7.3:1246923-1246942 | MS.gene050621:intron | 45.0% |
| ! | TATGTAGAAGACAGTGCTGG+GGG | + | chr7.3:1248486-1248505 | MS.gene050621:CDS | 45.0% |
| !! | ACAATTTTGGAAGGAGGGAC+AGG | - | chr7.3:1248812-1248831 | None:intergenic | 45.0% |
| !! | CAGCTCTGCAATTTTCGAGA+TGG | + | chr7.3:1246251-1246270 | MS.gene050621:intron | 45.0% |
| !! | CGATAAGAGGTGTCTGAAGT+AGG | + | chr7.3:1246879-1246898 | MS.gene050621:intron | 45.0% |
| !! | CTGGGGTATTTTGTAAGGCT+TGG | + | chr7.3:1246940-1246959 | MS.gene050621:intron | 45.0% |
| !! | GCACACTCTGAAGTCAATAG+AGG | - | chr7.3:1249337-1249356 | None:intergenic | 45.0% |
| !! | GCTTGTGTGACGGGTTATTA+TGG | + | chr7.3:1247130-1247149 | MS.gene050621:intron | 45.0% |
| !!! | CTTTGGTTGCCAGGGTTTTT+TGG | - | chr7.3:1247097-1247116 | None:intergenic | 45.0% |
| !!! | TTGCCAGGGTTTTTTGGAGT+TGG | - | chr7.3:1247091-1247110 | None:intergenic | 45.0% |
| !!! | TAAATTTATATATTTTCTAT+GGG | + | chr7.3:1246366-1246385 | MS.gene050621:intron | 5.0% |
| !!! | TTTTATTTTAATAATGATAT+AGG | - | chr7.3:1247623-1247642 | None:intergenic | 5.0% |
| AAATCAGCTGGTCCCTGGTA+AGG | - | chr7.3:1247272-1247291 | None:intergenic | 50.0% | |
| AAGAGGTTGTCCCATGCCAA+GGG | - | chr7.3:1247790-1247809 | None:intergenic | 50.0% | |
| ACAAATGAGCGACAAGGCTC+TGG | + | chr7.3:1246490-1246509 | MS.gene050621:CDS | 50.0% | |
| ACATTTAATGCCCCGTTCCC+AGG | + | chr7.3:1247910-1247929 | MS.gene050621:CDS | 50.0% | |
| AGAACTAACCTGTCGCCCTT+TGG | - | chr7.3:1246678-1246697 | None:intergenic | 50.0% | |
| AGGTTCCATAACCCTTGGCA+TGG | + | chr7.3:1247776-1247795 | MS.gene050621:intron | 50.0% | |
| AGTGAGGGACGCATTTCCAT+AGG | - | chr7.3:1248973-1248992 | None:intergenic | 50.0% | |
| ATGGCGAGGAGATGATCTGT+TGG | + | chr7.3:1247314-1247333 | MS.gene050621:intron | 50.0% | |
| CAAGTTCTCCAAGCAGATGG+AGG | + | chr7.3:1248036-1248055 | MS.gene050621:CDS | 50.0% | |
| CATCAGAGCGAAGTCCTTCT+GGG | - | chr7.3:1245986-1246005 | None:intergenic | 50.0% | |
| CCGGAGACTGTAATAGAACC+TGG | - | chr7.3:1247931-1247950 | None:intergenic | 50.0% | |
| CTCCATCTGCTTGGAGAACT+TGG | - | chr7.3:1248038-1248057 | None:intergenic | 50.0% | |
| CTTCAAAATCAGCTGGTCCC+TGG | - | chr7.3:1247277-1247296 | None:intergenic | 50.0% | |
| GAGCCAACAAATGAGCGACA+AGG | + | chr7.3:1246484-1246503 | MS.gene050621:CDS | 50.0% | |
| GCTAACCTTGCTTGTGTGAC+GGG | + | chr7.3:1247121-1247140 | MS.gene050621:intron | 50.0% | |
| GGAAACGGCAGTACTTCCAT+GGG | - | chr7.3:1246017-1246036 | None:intergenic | 50.0% | |
| GGTTCCATAACCCTTGGCAT+GGG | + | chr7.3:1247777-1247796 | MS.gene050621:intron | 50.0% | |
| GTCAATAGAGGCCGCTATAG+CGG | - | chr7.3:1249325-1249344 | None:intergenic | 50.0% | |
| GTCCAAGTTCTCCAAGCAGA+TGG | + | chr7.3:1248033-1248052 | MS.gene050621:CDS | 50.0% | |
| GTGAGGGACGCATTTCCATA+GGG | - | chr7.3:1248972-1248991 | None:intergenic | 50.0% | |
| GTTATGCAACTGGCTACGGA+AGG | + | chr7.3:1249676-1249695 | MS.gene050621:CDS | 50.0% | |
| TAGCAGCACTTTGGTTGCCA+GGG | - | chr7.3:1247105-1247124 | None:intergenic | 50.0% | |
| TGAGGGACGCATTTCCATAG+GGG | - | chr7.3:1248971-1248990 | None:intergenic | 50.0% | |
| TGATTGAGCGGCGTTCAGTT+GGG | + | chr7.3:1249541-1249560 | MS.gene050621:intron | 50.0% | |
| TTAGCAGCACTTTGGTTGCC+AGG | - | chr7.3:1247106-1247125 | None:intergenic | 50.0% | |
| TTGATTGAGCGGCGTTCAGT+TGG | + | chr7.3:1249540-1249559 | MS.gene050621:intron | 50.0% | |
| TTGTCCCATGCCAAGGGTTA+TGG | - | chr7.3:1247784-1247803 | None:intergenic | 50.0% | |
| ! | GAGCCTTGTCGCTCATTTGT+TGG | - | chr7.3:1246490-1246509 | None:intergenic | 50.0% |
| ! | GGTGCTGTATCCAAAGCTGA+TGG | + | chr7.3:1246148-1246167 | MS.gene050621:CDS | 50.0% |
| ! | TGCTGTTTATGGCCCTAGAG+AGG | + | chr7.3:1246293-1246312 | MS.gene050621:CDS | 50.0% |
| !! | AGAGGTGTCTGAAGTAGGTG+TGG | + | chr7.3:1246884-1246903 | MS.gene050621:intron | 50.0% |
| !! | CAGGGACCAGCTGATTTTGA+AGG | + | chr7.3:1247275-1247294 | MS.gene050621:intron | 50.0% |
| !! | TTAGCACTGGTGATCGCATG+AGG | + | chr7.3:1246649-1246668 | MS.gene050621:CDS | 50.0% |
| ACAAAAGGTCCCCGGAAGTG+CGG | - | chr7.3:1248997-1249016 | None:intergenic | 55.0% | |
| ACGGCAGTACTTCCATGGGT+CGG | - | chr7.3:1246013-1246032 | None:intergenic | 55.0% | |
| ACTTTGGCCCTAGCTGATGC+TGG | + | chr7.3:1248251-1248270 | MS.gene050621:CDS | 55.0% | |
| AGGGATCCCAGCATCAGCTA+GGG | - | chr7.3:1248261-1248280 | None:intergenic | 55.0% | |
| ATGGAGTACGTCAGCCCAGA+AGG | + | chr7.3:1245969-1245988 | MS.gene050621:CDS | 55.0% | |
| CAAGAGGTTGTCCCATGCCA+AGG | - | chr7.3:1247791-1247810 | None:intergenic | 55.0% | |
| CCAGAAGGACTTCGCTCTGA+TGG | + | chr7.3:1245984-1246003 | MS.gene050621:CDS | 55.0% | |
| CCATCAGAGCGAAGTCCTTC+TGG | - | chr7.3:1245987-1246006 | None:intergenic | 55.0% | |
| CTCAATAGCACCCCTCTGCT+TGG | + | chr7.3:1248317-1248336 | MS.gene050621:CDS | 55.0% | |
| CTTTGGCCCTAGCTGATGCT+GGG | + | chr7.3:1248252-1248271 | MS.gene050621:CDS | 55.0% | |
| GATGGGAAAGGGATGGGAGA+GGG | + | chr7.3:1247517-1247536 | MS.gene050621:intron | 55.0% | |
| GGGAAACGGCAGTACTTCCA+TGG | - | chr7.3:1246018-1246037 | None:intergenic | 55.0% | |
| GGGGGTCCTGATGTAACTGT+AGG | + | chr7.3:1248504-1248523 | MS.gene050621:CDS | 55.0% | |
| TAGGGATCCCAGCATCAGCT+AGG | - | chr7.3:1248262-1248281 | None:intergenic | 55.0% | |
| TGAGGAAACCAAAGGGCGAC+AGG | + | chr7.3:1246667-1246686 | MS.gene050621:CDS | 55.0% | |
| !! | CAAGCAGAGGGGTGCTATTG+AGG | - | chr7.3:1248319-1248338 | None:intergenic | 55.0% |
| GGATGGGAAAGGGATGGGAG+AGG | + | chr7.3:1247516-1247535 | MS.gene050621:intron | 60.0% | |
| GTCCCTCACTTCCGCACTTC+CGG | + | chr7.3:1248983-1249002 | MS.gene050621:intron | 60.0% | |
| TCCCTCACTTCCGCACTTCC+GGG | + | chr7.3:1248984-1249003 | MS.gene050621:intron | 60.0% | |
| CCCTCACTTCCGCACTTCCG+GGG | + | chr7.3:1248985-1249004 | MS.gene050621:intron | 65.0% | |
| CTCTGATGGTCGCCGACCCA+TGG | + | chr7.3:1245998-1246017 | MS.gene050621:CDS | 65.0% | |
| GAGCGGCGTTCAGTTGGGTG+TGG | + | chr7.3:1249546-1249565 | MS.gene050621:intron | 65.0% | |
| ! | CCCCGGAAGTGCGGAAGTGA+GGG | - | chr7.3:1248988-1249007 | None:intergenic | 65.0% |
| ! | TCCCCGGAAGTGCGGAAGTG+AGG | - | chr7.3:1248989-1249008 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 1245969 | 1249874 | 1245969 | ID=MS.gene050621 |
| chr7.3 | mRNA | 1245969 | 1249874 | 1245969 | ID=MS.gene050621.t1;Parent=MS.gene050621 |
| chr7.3 | exon | 1245969 | 1246022 | 1245969 | ID=MS.gene050621.t1.exon1;Parent=MS.gene050621.t1 |
| chr7.3 | CDS | 1245969 | 1246022 | 1245969 | ID=cds.MS.gene050621.t1;Parent=MS.gene050621.t1 |
| chr7.3 | exon | 1246124 | 1246170 | 1246124 | ID=MS.gene050621.t1.exon2;Parent=MS.gene050621.t1 |
| chr7.3 | CDS | 1246124 | 1246170 | 1246124 | ID=cds.MS.gene050621.t1;Parent=MS.gene050621.t1 |
| chr7.3 | exon | 1246254 | 1246314 | 1246254 | ID=MS.gene050621.t1.exon3;Parent=MS.gene050621.t1 |
| chr7.3 | CDS | 1246254 | 1246314 | 1246254 | ID=cds.MS.gene050621.t1;Parent=MS.gene050621.t1 |
| chr7.3 | exon | 1246473 | 1246511 | 1246473 | ID=MS.gene050621.t1.exon4;Parent=MS.gene050621.t1 |
| chr7.3 | CDS | 1246473 | 1246511 | 1246473 | ID=cds.MS.gene050621.t1;Parent=MS.gene050621.t1 |
| chr7.3 | exon | 1246621 | 1246688 | 1246621 | ID=MS.gene050621.t1.exon5;Parent=MS.gene050621.t1 |
| chr7.3 | CDS | 1246621 | 1246688 | 1246621 | ID=cds.MS.gene050621.t1;Parent=MS.gene050621.t1 |
| chr7.3 | exon | 1247853 | 1247931 | 1247853 | ID=MS.gene050621.t1.exon6;Parent=MS.gene050621.t1 |
| chr7.3 | CDS | 1247853 | 1247931 | 1247853 | ID=cds.MS.gene050621.t1;Parent=MS.gene050621.t1 |
| chr7.3 | exon | 1248021 | 1248057 | 1248021 | ID=MS.gene050621.t1.exon7;Parent=MS.gene050621.t1 |
| chr7.3 | CDS | 1248021 | 1248057 | 1248021 | ID=cds.MS.gene050621.t1;Parent=MS.gene050621.t1 |
| chr7.3 | exon | 1248222 | 1248338 | 1248222 | ID=MS.gene050621.t1.exon8;Parent=MS.gene050621.t1 |
| chr7.3 | CDS | 1248222 | 1248338 | 1248222 | ID=cds.MS.gene050621.t1;Parent=MS.gene050621.t1 |
| chr7.3 | exon | 1248478 | 1248563 | 1248478 | ID=MS.gene050621.t1.exon9;Parent=MS.gene050621.t1 |
| chr7.3 | CDS | 1248478 | 1248563 | 1248478 | ID=cds.MS.gene050621.t1;Parent=MS.gene050621.t1 |
| chr7.3 | exon | 1249640 | 1249729 | 1249640 | ID=MS.gene050621.t1.exon10;Parent=MS.gene050621.t1 |
| chr7.3 | CDS | 1249640 | 1249729 | 1249640 | ID=cds.MS.gene050621.t1;Parent=MS.gene050621.t1 |
| chr7.3 | exon | 1249827 | 1249874 | 1249827 | ID=MS.gene050621.t1.exon11;Parent=MS.gene050621.t1 |
| chr7.3 | CDS | 1249827 | 1249874 | 1249827 | ID=cds.MS.gene050621.t1;Parent=MS.gene050621.t1 |
| Gene Sequence |
| Protein sequence |
