AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene048916

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene048916.t1 MTR_8g099350 98.061 361 7 0 1 361 1 361 0.0 738
MS.gene048916.t1 MTR_3g090860 38.133 375 166 16 12 361 7 340 1.54e-56 188
MS.gene048916.t1 MTR_7g117200 36.658 371 181 11 1 361 1 327 7.73e-56 186
MS.gene048916.t1 MTR_8g027860 35.135 370 191 13 1 349 1 342 2.98e-50 172
MS.gene048916.t1 MTR_5g067680 59.459 74 30 0 128 201 198 271 1.02e-23 100
MS.gene048916.t1 MTR_7g073430 32.178 202 105 5 1 191 1 181 1.51e-23 99.0
MS.gene048916.t1 MTR_2g075700 30.583 206 108 6 8 191 11 203 2.22e-22 96.3
MS.gene048916.t1 MTR_8g005750 33.511 188 99 5 13 198 6 169 2.37e-22 95.5
MS.gene048916.t1 MTR_2g075680 29.612 206 117 4 6 191 10 207 4.70e-20 89.7
MS.gene048916.t1 MTR_7g073380 32.143 196 95 5 9 191 12 182 5.01e-20 89.4
MS.gene048916.t1 MTR_2g075690 30.144 209 119 5 1 191 1 200 3.54e-19 87.0
MS.gene048916.t1 MTR_0002s1250 28.718 195 101 5 13 196 8 175 9.36e-19 85.1
MS.gene048916.t1 MTR_2g075750 40.000 110 59 2 132 239 28 132 1.07e-18 83.2
MS.gene048916.t1 MTR_2g075610 53.333 60 28 0 132 191 29 88 1.92e-18 82.8
MS.gene048916.t1 MTR_5g067700 30.055 183 100 5 9 191 11 165 1.33e-17 81.6
MS.gene048916.t1 MTR_3g093830 34.254 181 95 6 18 191 23 186 4.83e-17 81.3
MS.gene048916.t1 MTR_7g062220 32.000 150 90 5 45 189 36 178 1.21e-15 77.0
MS.gene048916.t1 MTR_2g016770 33.571 140 84 4 106 244 9 140 1.50e-15 75.1
MS.gene048916.t1 MTR_8g028565 41.860 86 42 2 105 190 134 211 2.19e-15 76.6
MS.gene048916.t1 MTR_2g016770 36.207 116 65 4 130 244 25 132 5.35e-15 73.6
MS.gene048916.t1 MTR_3g009470 51.351 74 28 3 120 189 264 333 6.14e-15 76.6
MS.gene048916.t1 MTR_4g094588 53.521 71 25 2 132 197 178 245 7.15e-15 75.1
MS.gene048916.t1 MTR_8g092140 52.308 65 28 1 132 196 160 221 7.24e-15 73.6
MS.gene048916.t1 MTR_7g079010 42.056 107 43 5 94 189 97 195 7.65e-15 73.2
MS.gene048916.t1 MTR_3g009470 51.351 74 28 3 120 189 264 333 9.23e-15 75.9
MS.gene048916.t1 MTR_7g079040 42.353 85 41 2 105 189 133 209 1.59e-14 73.9
MS.gene048916.t1 MTR_3g095080 53.125 64 27 1 132 195 168 228 1.99e-14 72.4
MS.gene048916.t1 MTR_5g043880 43.750 96 50 2 95 189 86 178 2.24e-14 73.2
MS.gene048916.t1 MTR_7g109800 57.627 59 22 1 132 190 145 200 2.62e-14 73.2
MS.gene048916.t1 MTR_3g095080 51.471 68 30 1 132 199 144 208 2.69e-14 71.6
MS.gene048916.t1 MTR_5g073620 50.000 62 31 0 130 191 670 731 3.77e-14 74.3
MS.gene048916.t1 MTR_7g109600 33.775 151 88 3 106 246 24 172 3.94e-14 72.0
MS.gene048916.t1 MTR_3g108960 39.583 96 46 3 100 194 290 374 3.98e-14 73.6
MS.gene048916.t1 MTR_8g087000 39.130 115 62 3 81 189 19 131 5.99e-14 71.2
MS.gene048916.t1 MTR_5g016610 43.529 85 43 3 106 189 174 254 6.21e-14 71.6
MS.gene048916.t1 MTR_1g086790 42.222 90 44 2 101 190 132 213 6.21e-14 72.4
MS.gene048916.t1 MTR_5g091390 55.172 58 23 1 132 189 157 211 6.31e-14 72.0
MS.gene048916.t1 MTR_8g032510 33.654 104 62 1 89 192 83 179 7.49e-14 71.6
MS.gene048916.t1 MTR_7g011820 44.048 84 39 2 106 189 389 464 9.60e-14 72.8
MS.gene048916.t1 MTR_7g011820 49.206 63 28 2 127 189 223 281 2.21e-13 71.6
MS.gene048916.t1 MTR_7g100510 46.575 73 35 2 117 189 174 242 1.11e-13 72.4
MS.gene048916.t1 MTR_7g100510 50.704 71 29 2 119 189 351 415 2.61e-13 71.2
MS.gene048916.t1 MTR_1g099600 38.144 97 50 3 96 189 151 240 2.03e-13 70.5
MS.gene048916.t1 MTR_6g053200 38.043 92 51 2 98 189 300 385 2.24e-13 71.6
MS.gene048916.t1 MTR_1g009613 36.538 104 52 4 89 189 225 317 2.26e-13 70.9
MS.gene048916.t1 MTR_7g080020 55.172 58 22 2 132 189 280 333 2.96e-13 71.6
MS.gene048916.t1 MTR_0117s0040 47.887 71 34 2 120 189 61 129 4.63e-13 68.6
MS.gene048916.t1 MTR_7g028415 54.237 59 24 1 132 190 93 148 4.92e-13 67.0
MS.gene048916.t1 MTR_7g028710 54.237 59 24 1 132 190 93 148 4.92e-13 67.0
MS.gene048916.t1 MTR_4g107970 35.811 148 68 7 57 189 98 233 5.18e-13 70.5
MS.gene048916.t1 MTR_2g033820 52.542 59 25 1 132 190 203 258 5.91e-13 69.7
MS.gene048916.t1 MTR_8g087000 37.931 116 63 4 81 189 19 132 7.71e-13 68.2
MS.gene048916.t1 MTR_4g082580 47.619 63 30 1 127 189 140 199 7.83e-13 69.3
MS.gene048916.t1 MTR_4g082580 53.448 58 24 1 132 189 278 332 4.43e-12 67.0
MS.gene048916.t1 MTR_4g107970 35.811 148 68 7 57 189 175 310 9.99e-13 69.7
MS.gene048916.t1 MTR_7g110720 49.315 73 34 2 118 189 174 244 1.26e-12 68.9
MS.gene048916.t1 MTR_7g110720 49.315 73 34 2 118 189 201 271 1.27e-12 68.9
MS.gene048916.t1 MTR_8g007270 40.000 90 46 2 100 189 127 208 1.55e-12 66.6
MS.gene048916.t1 MTR_8g098945 43.077 65 35 1 125 189 122 184 1.66e-12 67.4
MS.gene048916.t1 MTR_1g070455 49.123 57 27 1 133 189 294 348 1.98e-12 68.2
MS.gene048916.t1 MTR_4g094908 47.368 57 28 1 133 189 267 321 2.05e-12 67.8
MS.gene048916.t1 MTR_5g042920 51.724 58 25 1 132 189 320 374 3.06e-12 67.8
MS.gene048916.t1 MTR_5g042920 49.206 63 28 2 127 189 146 204 1.16e-11 66.2
MS.gene048916.t1 MTR_4g013260 32.857 140 77 4 132 263 184 314 3.08e-12 68.2
MS.gene048916.t1 MTR_7g071120 55.172 58 22 2 132 189 166 219 3.21e-12 67.8
MS.gene048916.t1 MTR_7g080000 46.970 66 31 2 132 197 234 295 3.36e-12 68.2
MS.gene048916.t1 MTR_8g096730 44.828 58 29 1 132 189 70 124 3.92e-12 63.9
MS.gene048916.t1 MTR_5g094430 50.000 58 26 1 132 189 364 418 5.13e-12 67.4
MS.gene048916.t1 MTR_5g094430 49.254 67 28 3 125 189 191 253 4.27e-11 64.7
MS.gene048916.t1 MTR_3g031220 51.724 58 24 2 132 189 198 251 5.25e-12 67.0
MS.gene048916.t1 MTR_5g074400 51.724 58 24 2 132 189 243 296 5.34e-12 67.4
MS.gene048916.t1 MTR_3g056100 39.062 128 60 7 75 189 334 456 5.40e-12 67.4
MS.gene048916.t1 MTR_3g056100 39.062 128 60 7 75 189 347 469 5.83e-12 67.4
MS.gene048916.t1 MTR_8g069935 37.931 87 48 2 103 189 306 386 6.28e-12 67.0
MS.gene048916.t1 MTR_1g013760 50.877 57 26 1 133 189 141 195 6.42e-12 65.9
MS.gene048916.t1 MTR_2g105060 47.059 68 32 2 122 189 86 149 6.63e-12 65.1
MS.gene048916.t1 MTR_2g083870 36.082 97 60 1 93 189 41 135 6.75e-12 65.5
MS.gene048916.t1 MTR_3g053330 34.677 124 63 5 77 200 207 312 6.76e-12 67.0
MS.gene048916.t1 MTR_3g031220 51.724 58 24 2 132 189 198 251 7.30e-12 67.0
MS.gene048916.t1 MTR_3g031220 49.153 59 27 1 132 190 365 420 7.75e-11 63.5
MS.gene048916.t1 MTR_3g056100 39.062 128 60 7 75 189 190 312 8.01e-12 66.6
MS.gene048916.t1 MTR_5g094430 50.000 58 26 1 132 189 230 284 8.02e-12 66.6
MS.gene048916.t1 MTR_5g094430 49.254 67 28 3 125 189 57 119 5.75e-11 63.9
MS.gene048916.t1 MTR_2g088000 46.835 79 39 2 112 189 328 404 8.03e-12 67.0
MS.gene048916.t1 MTR_5g094430 50.000 58 26 1 132 189 252 306 8.06e-12 66.6
MS.gene048916.t1 MTR_5g094430 49.254 67 28 3 125 189 79 141 5.26e-11 63.9
MS.gene048916.t1 MTR_4g127040 40.449 89 48 3 106 193 220 304 8.12e-12 65.9
MS.gene048916.t1 MTR_3g056100 39.062 128 60 7 75 189 203 325 8.33e-12 66.6
MS.gene048916.t1 MTR_2g105060 47.059 68 32 2 122 189 161 224 8.61e-12 65.9
MS.gene048916.t1 MTR_2g032030 50.877 57 26 1 133 189 268 322 1.36e-11 65.9
MS.gene048916.t1 MTR_2g032030 50.877 57 26 1 133 189 268 322 2.20e-11 65.5
MS.gene048916.t1 MTR_7g009730 45.205 73 37 2 118 189 204 274 2.65e-11 65.1
MS.gene048916.t1 MTR_3g106060 41.250 80 43 3 111 189 117 193 3.13e-11 63.9
MS.gene048916.t1 MTR_8g067635 46.552 58 29 1 132 189 349 404 4.70e-11 64.3
MS.gene048916.t1 MTR_8g067650 38.043 92 41 3 103 189 314 394 4.77e-11 64.3
MS.gene048916.t1 MTR_1g078260 46.575 73 32 3 119 190 237 303 5.41e-11 64.3
MS.gene048916.t1 MTR_4g122530 48.276 58 27 1 132 189 208 262 5.53e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene048916.t1 AT4G11070 39.118 363 145 12 6 353 5 306 7.77e-65 208
MS.gene048916.t1 AT4G23810 44.561 285 120 7 5 259 7 283 3.75e-64 207
MS.gene048916.t1 AT4G11070 38.483 356 125 11 6 353 5 274 1.21e-61 199
MS.gene048916.t1 AT5G24110 39.234 209 93 7 7 205 10 194 1.42e-35 132
MS.gene048916.t1 AT2G46400 32.192 292 155 8 8 295 4 256 8.09e-34 127
MS.gene048916.t1 AT3G56400 36.464 181 102 5 12 191 11 179 8.27e-25 102
MS.gene048916.t1 AT2G40750 35.000 180 81 5 40 201 63 224 2.27e-20 91.3
MS.gene048916.t1 AT2G40740 58.065 62 26 0 130 191 171 232 3.02e-20 90.1
MS.gene048916.t1 AT2G40740 58.065 62 26 0 130 191 180 241 3.70e-20 90.1
MS.gene048916.t1 AT1G66550 39.091 110 63 2 82 191 57 162 1.40e-17 81.6
MS.gene048916.t1 AT1G66550 51.471 68 32 1 124 191 101 167 3.63e-17 80.5
MS.gene048916.t1 AT2G37260 36.567 134 72 3 61 189 198 323 2.29e-16 79.7
MS.gene048916.t1 AT2G37260 36.567 134 72 3 61 189 196 321 2.39e-16 79.7
MS.gene048916.t1 AT2G37260 36.567 134 72 3 61 189 278 403 3.15e-16 80.1
MS.gene048916.t1 AT5G45260 57.895 57 24 0 133 189 1209 1265 3.57e-16 80.9
MS.gene048916.t1 AT5G52830 46.512 86 39 2 105 190 143 221 1.19e-15 77.8
MS.gene048916.t1 AT1G66600 41.860 86 47 1 106 191 80 162 1.96e-15 75.5
MS.gene048916.t1 AT4G31550 35.507 138 67 5 73 193 172 304 2.43e-15 76.6
MS.gene048916.t1 AT4G01250 41.860 86 42 2 104 189 106 183 2.50e-15 76.3
MS.gene048916.t1 AT4G18170 44.681 94 48 2 97 189 136 226 3.84e-15 75.9
MS.gene048916.t1 AT1G29860 58.621 58 21 1 132 189 136 190 4.59e-15 75.1
MS.gene048916.t1 AT5G41570 39.231 130 66 7 77 204 51 169 6.05e-15 72.8
MS.gene048916.t1 AT1G64000 45.333 75 36 2 132 204 114 185 2.41e-14 71.2
MS.gene048916.t1 AT5G49520 54.237 59 24 1 132 190 221 276 2.66e-14 73.9
MS.gene048916.t1 AT5G22570 30.570 193 114 4 4 196 2 174 2.78e-14 72.8
MS.gene048916.t1 AT1G69310 42.857 91 43 3 103 193 123 204 3.41e-14 72.8
MS.gene048916.t1 AT1G69310 42.857 91 43 3 103 193 123 204 3.41e-14 72.8
MS.gene048916.t1 AT1G69310 42.857 91 43 3 103 193 123 204 3.41e-14 72.8
MS.gene048916.t1 AT1G66560 48.333 60 31 0 132 191 103 162 4.13e-14 71.6
MS.gene048916.t1 AT4G31550 34.058 138 70 5 73 193 172 305 5.10e-14 72.4
MS.gene048916.t1 AT5G46350 55.172 58 23 1 132 189 183 237 6.50e-14 72.4
MS.gene048916.t1 AT1G80590 45.455 66 36 0 133 198 86 151 8.74e-14 70.5
MS.gene048916.t1 AT4G04450 45.349 86 44 2 105 189 170 253 1.25e-13 72.0
MS.gene048916.t1 AT1G29280 53.333 60 26 1 130 189 72 129 1.25e-13 70.5
MS.gene048916.t1 AT5G01900 47.458 59 31 0 133 191 111 169 1.46e-13 70.5
MS.gene048916.t1 AT2G03340 35.897 117 57 3 132 248 415 513 1.59e-13 72.0
MS.gene048916.t1 AT2G03340 50.000 60 26 2 130 189 248 303 1.70e-11 65.9
MS.gene048916.t1 AT2G23320 41.176 85 45 3 106 189 215 295 1.82e-13 70.9
MS.gene048916.t1 AT4G39410 51.515 66 27 2 132 196 223 284 2.37e-13 70.5
MS.gene048916.t1 AT4G04450 45.349 86 44 2 105 189 264 347 2.96e-13 71.2
MS.gene048916.t1 AT2G38470 43.333 90 47 2 100 189 152 237 3.11e-13 71.2
MS.gene048916.t1 AT2G24570 33.103 145 74 6 62 189 160 298 3.96e-13 69.7
MS.gene048916.t1 AT4G26440 53.125 64 26 2 130 193 176 235 4.43e-13 70.9
MS.gene048916.t1 AT4G26440 50.847 59 26 1 132 190 372 427 4.35e-11 64.7
MS.gene048916.t1 AT2G47260 43.820 89 46 2 103 190 144 229 4.73e-13 69.7
MS.gene048916.t1 AT2G44745 41.758 91 43 3 101 189 117 199 6.45e-13 67.8
MS.gene048916.t1 AT5G56270 55.000 60 23 2 130 189 271 326 7.42e-13 70.1
MS.gene048916.t1 AT3G01080 55.000 60 23 2 130 189 203 258 8.50e-13 68.9
MS.gene048916.t1 AT5G07100 51.724 58 25 1 132 189 141 195 1.31e-12 67.0
MS.gene048916.t1 AT5G07100 45.763 59 29 1 131 189 23 78 2.12e-11 63.5
MS.gene048916.t1 AT5G07100 51.724 58 25 1 132 189 141 195 1.31e-12 67.0
MS.gene048916.t1 AT5G07100 45.763 59 29 1 131 189 23 78 2.12e-11 63.5
MS.gene048916.t1 AT5G07100 51.724 58 25 1 132 189 141 195 1.31e-12 67.0
MS.gene048916.t1 AT5G07100 45.763 59 29 1 131 189 23 78 2.12e-11 63.5
MS.gene048916.t1 AT5G07100 51.724 58 25 1 132 189 141 195 1.31e-12 67.0
MS.gene048916.t1 AT5G07100 45.763 59 29 1 131 189 23 78 2.12e-11 63.5
MS.gene048916.t1 AT5G07100 51.724 58 25 1 132 189 234 288 1.37e-12 68.2
MS.gene048916.t1 AT5G07100 45.763 59 29 1 131 189 116 171 2.12e-11 64.7
MS.gene048916.t1 AT2G25000 50.000 58 27 1 132 189 103 158 1.38e-12 67.0
MS.gene048916.t1 AT2G25000 50.000 58 27 1 132 189 103 158 1.38e-12 67.0
MS.gene048916.t1 AT1G13960 51.724 58 25 1 132 189 409 463 1.43e-12 68.9
MS.gene048916.t1 AT1G13960 47.619 63 29 2 127 189 224 282 6.27e-12 67.0
MS.gene048916.t1 AT4G24240 42.353 85 44 3 106 189 256 336 1.48e-12 68.6
MS.gene048916.t1 AT1G62300 45.679 81 41 2 110 189 289 367 1.62e-12 68.9
MS.gene048916.t1 AT3G01080 55.000 60 23 2 130 189 203 258 1.82e-12 68.6
MS.gene048916.t1 AT3G01080 51.724 58 25 1 132 189 344 398 5.14e-12 67.4
MS.gene048916.t1 AT2G25000 50.000 58 27 1 132 189 125 180 2.16e-12 67.0
MS.gene048916.t1 AT3G01080 55.000 60 23 2 130 189 165 220 2.29e-12 68.2
MS.gene048916.t1 AT3G01080 51.724 58 25 1 132 189 306 360 6.74e-12 66.6
MS.gene048916.t1 AT2G46130 42.667 75 38 2 132 204 30 101 2.32e-12 63.5
MS.gene048916.t1 AT1G13960 51.724 58 25 1 132 189 256 310 2.82e-12 67.8
MS.gene048916.t1 AT1G13960 47.619 63 29 2 127 189 71 129 1.06e-11 65.9
MS.gene048916.t1 AT2G25000 50.000 58 27 1 132 189 146 201 2.99e-12 66.6
MS.gene048916.t1 AT2G34830 42.857 91 41 3 103 189 187 270 3.10e-12 67.8
MS.gene048916.t1 AT2G34830 42.857 91 41 3 103 189 196 279 3.20e-12 67.8
MS.gene048916.t1 AT4G23550 50.877 57 26 1 133 189 141 195 3.33e-12 67.0
MS.gene048916.t1 AT5G28650 40.476 84 47 2 106 189 237 317 3.55e-12 67.0
MS.gene048916.t1 AT2G30250 52.632 57 24 1 133 189 329 382 4.72e-12 67.0
MS.gene048916.t1 AT4G26640 44.000 75 33 2 132 200 341 412 4.81e-12 67.4
MS.gene048916.t1 AT4G26640 53.448 58 23 2 132 189 171 224 2.47e-11 65.5
MS.gene048916.t1 AT4G26640 44.000 75 33 2 132 200 381 452 5.65e-12 67.4
MS.gene048916.t1 AT4G26640 53.448 58 23 2 132 189 211 264 2.62e-11 65.5
MS.gene048916.t1 AT3G58710 31.176 170 82 6 76 237 22 164 5.71e-12 65.9
MS.gene048916.t1 AT4G26640 44.000 75 33 2 132 200 309 380 5.78e-12 67.0
MS.gene048916.t1 AT4G26640 53.448 58 23 2 132 189 139 192 2.82e-11 65.1
MS.gene048916.t1 AT5G13080 50.847 59 26 1 132 190 67 122 7.05e-12 63.2
MS.gene048916.t1 AT3G58710 36.111 108 58 3 130 237 69 165 7.64e-12 65.5
MS.gene048916.t1 AT2G04880 50.877 57 25 1 133 189 284 337 8.02e-12 66.6
MS.gene048916.t1 AT2G04880 50.877 57 25 1 133 189 308 361 8.39e-12 66.6
MS.gene048916.t1 AT4G26640 44.000 75 33 2 132 200 205 276 8.46e-12 66.2
MS.gene048916.t1 AT4G26640 53.448 58 23 2 132 189 35 88 3.37e-11 64.3
MS.gene048916.t1 AT4G26640 44.000 75 33 2 132 200 205 276 8.46e-12 66.2
MS.gene048916.t1 AT4G26640 53.448 58 23 2 132 189 35 88 3.37e-11 64.3
MS.gene048916.t1 AT4G26640 44.000 75 33 2 132 200 205 276 8.46e-12 66.2
MS.gene048916.t1 AT4G26640 53.448 58 23 2 132 189 35 88 3.37e-11 64.3
MS.gene048916.t1 AT4G26640 44.000 75 33 2 132 200 205 276 8.46e-12 66.2
MS.gene048916.t1 AT4G26640 53.448 58 23 2 132 189 35 88 3.37e-11 64.3
MS.gene048916.t1 AT1G18860 47.368 76 37 2 115 189 221 294 1.04e-11 66.6
MS.gene048916.t1 AT4G31800 48.276 58 28 1 132 189 111 166 1.05e-11 64.7
MS.gene048916.t1 AT4G31800 48.276 58 28 1 132 189 176 231 1.44e-11 65.1
MS.gene048916.t1 AT2G30590 33.945 109 68 3 82 189 263 368 1.45e-11 65.5
MS.gene048916.t1 AT3G04670 39.286 84 48 2 106 189 237 317 1.58e-11 65.1
MS.gene048916.t1 AT5G45050 45.714 70 36 1 120 189 1029 1096 1.90e-11 66.2
MS.gene048916.t1 AT5G45050 45.714 70 36 1 120 189 1168 1235 1.94e-11 66.2
MS.gene048916.t1 AT5G43290 36.842 114 65 3 116 226 98 207 1.97e-11 64.3
MS.gene048916.t1 AT5G45050 45.714 70 36 1 120 189 1140 1207 2.02e-11 66.2
MS.gene048916.t1 AT1G68150 29.897 194 115 7 8 189 106 290 2.26e-11 65.1
MS.gene048916.t1 AT1G30650 42.857 91 41 3 103 189 189 272 2.26e-11 65.1
MS.gene048916.t1 AT4G01720 54.386 57 24 1 133 189 240 294 6.42e-11 63.9
MS.gene048916.t1 AT2G21900 28.682 129 76 3 61 189 51 163 7.46e-11 61.6

Find 97 sgRNAs with CRISPR-Local

Find 117 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTGAATAATATTATTATTA+TGG 0.201295 4.2:-4584952 None:intergenic
TTCCTCTCACCTTGGATGTT+TGG 0.252288 4.2:-4584644 None:intergenic
GGAGTATTGAAAGGGAAATT+TGG 0.255776 4.2:-4585364 None:intergenic
ATCAAGTGGGAAACGGAAAT+TGG 0.267866 4.2:-4585326 None:intergenic
ACCCTCCCTTCCACTTCATA+TGG 0.295628 4.2:+4585070 MS.gene048916:CDS
AAATGGAGAATGAATGTAAC+TGG 0.315765 4.2:+4584087 None:intergenic
TCCCTTGTGCCAAGGGAATA+TGG 0.341878 4.2:-4584185 None:intergenic
GATGAGAAATAGTTTGATTC+TGG 0.343483 4.2:-4585193 None:intergenic
TAGTTTGATTCTGGTGTTGC+TGG 0.345432 4.2:-4585184 None:intergenic
GGCTACAACTGGAGAAAATA+TGG 0.354359 4.2:+4584601 MS.gene048916:CDS
TCCGCAACACACAGGACTGC+TGG 0.367448 4.2:+4584792 MS.gene048916:CDS
TTGGTAGACACTGGGGATTC+CGG 0.370552 4.2:-4584317 None:intergenic
CATCTTCATTTGGTCCTTCA+AGG 0.372550 4.2:-4584579 None:intergenic
TCTTATCTGATCCATCCATT+TGG 0.372776 4.2:-4584539 None:intergenic
TCCGGTAACGAAGTTATTAC+TGG 0.373162 4.2:-4584299 None:intergenic
CTTATCTGATCCATCCATTT+GGG 0.376482 4.2:-4584538 None:intergenic
CAGTTGTAGCCATCTTCATT+TGG 0.394723 4.2:-4584589 None:intergenic
TCCAGTAATAACTTCGTTAC+CGG 0.409442 4.2:+4584298 MS.gene048916:CDS
TTCAACATGAATGACTTTGA+TGG 0.415973 4.2:+4585223 MS.gene048916:CDS
AGGAAAGCATACATGTTCTC+AGG 0.418553 4.2:+4584874 MS.gene048916:CDS
AACAACCCTCGTTCAGAATC+CGG 0.427607 4.2:+4585253 MS.gene048916:CDS
TAATATTATTATTATGGATG+TGG 0.435488 4.2:-4584946 None:intergenic
AATATTATTATTATGGATGT+GGG 0.437122 4.2:-4584945 None:intergenic
GATACTGTCTTCTTATGAAA+AGG 0.438052 4.2:+4584223 MS.gene048916:CDS
TCGTTCAGAATCCGGCATTA+CGG 0.438155 4.2:+4585261 MS.gene048916:CDS
AAATTTGGATCTATTTCCAC+TGG 0.446466 4.2:-4585349 None:intergenic
CTGGAGATAATAAGTGTGTC+TGG 0.447945 4.2:-4585165 None:intergenic
AGAATTTGTTACTGATGTAT+TGG 0.449729 4.2:-4585296 None:intergenic
CCTCTGAGCGAGGACTTTGA+TGG 0.453832 4.2:+4584347 MS.gene048916:CDS
ACCTTGGATGTTTGGTGCCA+AGG 0.456940 4.2:-4584636 None:intergenic
TTGTGACTTATATGGCTCAA+TGG 0.457594 4.2:-4584906 None:intergenic
AACTTCTTGGTGATCTTGGA+AGG 0.459080 4.2:-4584372 None:intergenic
TCAGAAAGGTTGCGCCCAAA+TGG 0.459805 4.2:+4584524 MS.gene048916:intron
TCAAGTGGGAAACGGAAATT+GGG 0.461042 4.2:-4585325 None:intergenic
ACAATTGCAGAAGTTACTAT+AGG 0.468017 4.2:+4584762 MS.gene048916:intron
AGCTGTGACAGTAGCCTTGA+AGG 0.468608 4.2:+4584565 MS.gene048916:CDS
CTCATCAATGAGTTAATTCA+AGG 0.471281 4.2:+4584122 MS.gene048916:CDS
CAAATGAAGATGGCTACAAC+TGG 0.475643 4.2:+4584590 MS.gene048916:CDS
TCAACATGAATGACTTTGAT+GGG 0.485787 4.2:+4585224 MS.gene048916:CDS
AATTTCCCTTTCAATACTCC+AGG 0.487060 4.2:+4585367 MS.gene048916:CDS
GGGAAACGGAAATTGGGAAT+AGG 0.487728 4.2:-4585319 None:intergenic
ATATTTGACATAACTTATAG+AGG 0.489229 4.2:+4584854 MS.gene048916:CDS
ATGTCATTTCTTCGTTTCCC+AGG 0.491525 4.2:-4585039 None:intergenic
CAACGCAGGAAAACCACAGC+TGG 0.492451 4.2:+4585098 MS.gene048916:CDS
CCCTCCCTTCCACTTCATAT+GGG 0.499389 4.2:+4585071 MS.gene048916:CDS
GACTGTGAAAACAGATAACC+TGG 0.505158 4.2:+4585021 MS.gene048916:CDS
AAGTCATTCATGTTGAAAGA+TGG 0.505789 4.2:-4585217 None:intergenic
GAAGTGGAAGGGAGGGTGAA+AGG 0.511132 4.2:-4585064 None:intergenic
CTCTGAGCGAGGACTTTGAT+GGG 0.512988 4.2:+4584348 MS.gene048916:CDS
ATTTGTTACTGATGTATTGG+TGG 0.517341 4.2:-4585293 None:intergenic
GGAAATGATCTCCGTAATGC+CGG 0.517483 4.2:-4585272 None:intergenic
CCTTGGCACAAGGGATTCAC+AGG 0.521370 4.2:+4584193 MS.gene048916:CDS
GACTCCCATTGGTAGACACT+GGG 0.522624 4.2:-4584325 None:intergenic
CCGCAACACACAGGACTGCT+GGG 0.524602 4.2:+4584793 MS.gene048916:CDS
AAAGGTTGCGCCCAAATGGA+TGG 0.526632 4.2:+4584528 MS.gene048916:CDS
CCACTGGATCAAGTGGGAAA+CGG 0.528076 4.2:-4585333 None:intergenic
CTGTGAATCCCTTGTGCCAA+GGG 0.529447 4.2:-4584192 None:intergenic
CACCATATTCCCTTGGCACA+AGG 0.530203 4.2:+4584183 MS.gene048916:CDS
CCCAGCAGTCCTGTGTGTTG+CGG 0.534772 4.2:-4584793 None:intergenic
CCGTTTCCCACTTGATCCAG+TGG 0.535887 4.2:+4585333 MS.gene048916:CDS
TAAGTTATGTCAAATATTGT+CGG 0.537763 4.2:-4584848 None:intergenic
TTTCTTGTGATTGTTGTGCA+TGG 0.548111 4.2:-4584973 None:intergenic
AATCCCCAGTGTCTACCAAT+GGG 0.550161 4.2:+4584321 MS.gene048916:CDS
GAATCCCCAGTGTCTACCAA+TGG 0.558077 4.2:+4584320 MS.gene048916:CDS
GGACTCCCATTGGTAGACAC+TGG 0.559721 4.2:-4584326 None:intergenic
TTGAGGACACCATATTCCCT+TGG 0.560526 4.2:+4584176 MS.gene048916:CDS
AAAAGCCTGGAGTATTGAAA+GGG 0.560663 4.2:-4585372 None:intergenic
GGAAAGCATACATGTTCTCA+GGG 0.560758 4.2:+4584875 MS.gene048916:CDS
CTGGAAAAGACTGCTCAAGA+AGG 0.564100 4.2:-4585146 None:intergenic
CTTGAAGGACCAAATGAAGA+TGG 0.570659 4.2:+4584580 MS.gene048916:CDS
TCTATTTCCACTGGATCAAG+TGG 0.573162 4.2:-4585340 None:intergenic
CAATGAGTTAATTCAAGGGA+TGG 0.575038 4.2:+4584127 MS.gene048916:CDS
CCCATATGAAGTGGAAGGGA+GGG 0.578640 4.2:-4585071 None:intergenic
CTCGCTCAGAGGACTCCCAT+TGG 0.583201 4.2:-4584336 None:intergenic
GTGTACCCATATGAAGTGGA+AGG 0.589053 4.2:-4585076 None:intergenic
GCAGTCCTGTGTGTTGCGGA+AGG 0.591799 4.2:-4584789 None:intergenic
ACCATATTCCCTTGGCACAA+GGG 0.601275 4.2:+4584184 MS.gene048916:CDS
AGGCTGGCGGAACCCAGCTG+TGG 0.617131 4.2:-4585111 None:intergenic
ATATTATTATTATGGATGTG+GGG 0.623210 4.2:-4584944 None:intergenic
TTCATATGGGTACACAACGC+AGG 0.623458 4.2:+4585084 MS.gene048916:CDS
ACCCATATGAAGTGGAAGGG+AGG 0.626260 4.2:-4585072 None:intergenic
CCATCAAAGTCCTCGCTCAG+AGG 0.628233 4.2:-4584347 None:intergenic
CCTGTGAATCCCTTGTGCCA+AGG 0.629078 4.2:-4584193 None:intergenic
CGTTGTGTACCCATATGAAG+TGG 0.630275 4.2:-4585080 None:intergenic
TCCTTGGCACCAAACATCCA+AGG 0.635439 4.2:+4584635 MS.gene048916:CDS
AACGCAGGAAAACCACAGCT+GGG 0.639928 4.2:+4585099 MS.gene048916:CDS
CAATGGGAGTCCTCTGAGCG+AGG 0.641184 4.2:+4584337 MS.gene048916:CDS
GTAATGCCGGATTCTGAACG+AGG 0.646895 4.2:-4585259 None:intergenic
AGAGATTGAAAGAAGACTTG+AGG 0.648506 4.2:+4584159 MS.gene048916:CDS
TGTACCCATATGAAGTGGAA+GGG 0.653842 4.2:-4585075 None:intergenic
AATGGAGAATGAATGTAACT+GGG 0.656029 4.2:+4584088 None:intergenic
TCATCAATGAGTTAATTCAA+GGG 0.662966 4.2:+4584123 MS.gene048916:CDS
CTATTTCCACTGGATCAAGT+GGG 0.677998 4.2:-4585339 None:intergenic
GTGCACCTTCCGCAACACAC+AGG 0.679677 4.2:+4584784 MS.gene048916:CDS
TAATGCCGGATTCTGAACGA+GGG 0.706809 4.2:-4585258 None:intergenic
ACTGTGAAAACAGATAACCT+GGG 0.720036 4.2:+4585022 MS.gene048916:CDS
ACTCCCATTGGTAGACACTG+GGG 0.741937 4.2:-4584324 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATATTATTATTATGGATGT+GGG - chr4.2:4584948-4584967 None:intergenic 15.0%
!! GGTGAATAATATTATTATTA+TGG - chr4.2:4584955-4584974 None:intergenic 15.0%
!! TAATATTATTATTATGGATG+TGG - chr4.2:4584949-4584968 None:intergenic 15.0%
!! TTAAAAACAAATCAAAGAAA+AGG + chr4.2:4584393-4584412 MS.gene048916:CDS 15.0%
!! ATATTATTATTATGGATGTG+GGG - chr4.2:4584947-4584966 None:intergenic 20.0%
!! ATATTTGACATAACTTATAG+AGG + chr4.2:4584854-4584873 MS.gene048916:CDS 20.0%
!! TAAGTTATGTCAAATATTGT+CGG - chr4.2:4584851-4584870 None:intergenic 20.0%
!!! ATTTCAGGTAAAAAATTGTT+AGG - chr4.2:4584499-4584518 None:intergenic 20.0%
!!! TTGATTTGTTTTTAACTTCT+TGG - chr4.2:4584388-4584407 None:intergenic 20.0%
! GTAAAAAATTGTTAGGACAT+AGG - chr4.2:4584492-4584511 None:intergenic 25.0%
! GTAAATTTATTAGACACACT+TGG + chr4.2:4584415-4584434 MS.gene048916:intron 25.0%
! TCATCAATGAGTTAATTCAA+GGG + chr4.2:4584123-4584142 MS.gene048916:CDS 25.0%
!! CAAAAATTAGTTGATTTCTG+TGG - chr4.2:4584454-4584473 None:intergenic 25.0%
!! CACAGAAATCAACTAATTTT+TGG + chr4.2:4584452-4584471 MS.gene048916:intron 25.0%
!! TGTTTTTCTTGTGACTTATA+TGG - chr4.2:4584917-4584936 None:intergenic 25.0%
!!! AGAATTTGTTACTGATGTAT+TGG - chr4.2:4585299-4585318 None:intergenic 25.0%
AAATTTGGATCTATTTCCAC+TGG - chr4.2:4585352-4585371 None:intergenic 30.0%
AACTTCTGCAATTGTCATAA+TGG - chr4.2:4584757-4584776 None:intergenic 30.0%
AAGTCATTCATGTTGAAAGA+TGG - chr4.2:4585220-4585239 None:intergenic 30.0%
ACAATTGCAGAAGTTACTAT+AGG + chr4.2:4584762-4584781 MS.gene048916:intron 30.0%
ACTTCTGCAATTGTCATAAT+GGG - chr4.2:4584756-4584775 None:intergenic 30.0%
CTCATCAATGAGTTAATTCA+AGG + chr4.2:4584122-4584141 MS.gene048916:CDS 30.0%
GATACTGTCTTCTTATGAAA+AGG + chr4.2:4584223-4584242 MS.gene048916:CDS 30.0%
GATGAGAAATAGTTTGATTC+TGG - chr4.2:4585196-4585215 None:intergenic 30.0%
TATGGTCAAAAAGATATCCT+TGG + chr4.2:4584619-4584638 MS.gene048916:CDS 30.0%
TCAACATGAATGACTTTGAT+GGG + chr4.2:4585224-4585243 MS.gene048916:CDS 30.0%
TTCAACATGAATGACTTTGA+TGG + chr4.2:4585223-4585242 MS.gene048916:CDS 30.0%
! ATTTGTTACTGATGTATTGG+TGG - chr4.2:4585296-4585315 None:intergenic 30.0%
!!! TTTTAACTTCTTGGTGATCT+TGG - chr4.2:4584379-4584398 None:intergenic 30.0%
AATGAGATGACATCATTCAC+AGG - chr4.2:4584728-4584747 None:intergenic 35.0%
AATTTCCCTTTCAATACTCC+AGG + chr4.2:4585367-4585386 MS.gene048916:CDS 35.0%
ACCTGAAATTGCTTTCAGAA+AGG + chr4.2:4584510-4584529 MS.gene048916:intron 35.0%
ACTGTGAAAACAGATAACCT+GGG + chr4.2:4585022-4585041 MS.gene048916:CDS 35.0%
AGAGATTGAAAGAAGACTTG+AGG + chr4.2:4584159-4584178 MS.gene048916:CDS 35.0%
CAATGAGTTAATTCAAGGGA+TGG + chr4.2:4584127-4584146 MS.gene048916:CDS 35.0%
CTTATCTGATCCATCCATTT+GGG - chr4.2:4584541-4584560 None:intergenic 35.0%
TATTAGAATTCCTCTCACCT+TGG - chr4.2:4584655-4584674 None:intergenic 35.0%
TCCAGTAATAACTTCGTTAC+CGG + chr4.2:4584298-4584317 MS.gene048916:CDS 35.0%
TCTTATCTGATCCATCCATT+TGG - chr4.2:4584542-4584561 None:intergenic 35.0%
TTGTGACTTATATGGCTCAA+TGG - chr4.2:4584909-4584928 None:intergenic 35.0%
TTTCTTGTGATTGTTGTGCA+TGG - chr4.2:4584976-4584995 None:intergenic 35.0%
! ACCTTTCTGAAAGCAATTTC+AGG - chr4.2:4584514-4584533 None:intergenic 35.0%
! CAAGAAGGAATCGTTTTCTA+AGG - chr4.2:4585134-4585153 None:intergenic 35.0%
! GTTATCTGTTTTCACAGTCA+AGG - chr4.2:4585020-4585039 None:intergenic 35.0%
!! AAAAAGCCTGGAGTATTGAA+AGG - chr4.2:4585376-4585395 None:intergenic 35.0%
!! AAAAGCCTGGAGTATTGAAA+GGG - chr4.2:4585375-4585394 None:intergenic 35.0%
!! GGAGTATTGAAAGGGAAATT+TGG - chr4.2:4585367-4585386 None:intergenic 35.0%
ATCAAGTGGGAAACGGAAAT+TGG - chr4.2:4585329-4585348 None:intergenic 40.0%
CAAATGAAGATGGCTACAAC+TGG + chr4.2:4584590-4584609 MS.gene048916:CDS 40.0%
CAGTTGTAGCCATCTTCATT+TGG - chr4.2:4584592-4584611 None:intergenic 40.0%
CATCTTCATTTGGTCCTTCA+AGG - chr4.2:4584582-4584601 None:intergenic 40.0%
CTATTTCCACTGGATCAAGT+GGG - chr4.2:4585342-4585361 None:intergenic 40.0%
CTGGAGATAATAAGTGTGTC+TGG - chr4.2:4585168-4585187 None:intergenic 40.0%
CTTGAAGGACCAAATGAAGA+TGG + chr4.2:4584580-4584599 MS.gene048916:CDS 40.0%
GACTGTGAAAACAGATAACC+TGG + chr4.2:4585021-4585040 MS.gene048916:CDS 40.0%
GGCTACAACTGGAGAAAATA+TGG + chr4.2:4584601-4584620 MS.gene048916:CDS 40.0%
TCAAGTGGGAAACGGAAATT+GGG - chr4.2:4585328-4585347 None:intergenic 40.0%
TCCGGTAACGAAGTTATTAC+TGG - chr4.2:4584302-4584321 None:intergenic 40.0%
TCTATTTCCACTGGATCAAG+TGG - chr4.2:4585343-4585362 None:intergenic 40.0%
TGTACCCATATGAAGTGGAA+GGG - chr4.2:4585078-4585097 None:intergenic 40.0%
! AACTTCTTGGTGATCTTGGA+AGG - chr4.2:4584375-4584394 None:intergenic 40.0%
! AGGAAAGCATACATGTTCTC+AGG + chr4.2:4584874-4584893 MS.gene048916:CDS 40.0%
! ATGTCATTTCTTCGTTTCCC+AGG - chr4.2:4585042-4585061 None:intergenic 40.0%
! GGAAAGCATACATGTTCTCA+GGG + chr4.2:4584875-4584894 MS.gene048916:CDS 40.0%
!! TAGTTTGATTCTGGTGTTGC+TGG - chr4.2:4585187-4585206 None:intergenic 40.0%
!!! AAGGAATCGTTTTCTAAGGC+TGG - chr4.2:4585130-4585149 None:intergenic 40.0%
AACAACCCTCGTTCAGAATC+CGG + chr4.2:4585253-4585272 MS.gene048916:CDS 45.0%
AATCCCCAGTGTCTACCAAT+GGG + chr4.2:4584321-4584340 MS.gene048916:CDS 45.0%
ACCATATTCCCTTGGCACAA+GGG + chr4.2:4584184-4584203 MS.gene048916:CDS 45.0%
CGTTGTGTACCCATATGAAG+TGG - chr4.2:4585083-4585102 None:intergenic 45.0%
CTGGAAAAGACTGCTCAAGA+AGG - chr4.2:4585149-4585168 None:intergenic 45.0%
GGAAATGATCTCCGTAATGC+CGG - chr4.2:4585275-4585294 None:intergenic 45.0%
GGGAAACGGAAATTGGGAAT+AGG - chr4.2:4585322-4585341 None:intergenic 45.0%
GTGTACCCATATGAAGTGGA+AGG - chr4.2:4585079-4585098 None:intergenic 45.0%
TAATGCCGGATTCTGAACGA+GGG - chr4.2:4585261-4585280 None:intergenic 45.0%
TCGTTCAGAATCCGGCATTA+CGG + chr4.2:4585261-4585280 MS.gene048916:CDS 45.0%
TTCATATGGGTACACAACGC+AGG + chr4.2:4585084-4585103 MS.gene048916:CDS 45.0%
TTCCTCTCACCTTGGATGTT+TGG - chr4.2:4584647-4584666 None:intergenic 45.0%
TTGAGGACACCATATTCCCT+TGG + chr4.2:4584176-4584195 MS.gene048916:CDS 45.0%
!!! GAATCGTTTTCTAAGGCTGG+CGG - chr4.2:4585127-4585146 None:intergenic 45.0%
AAAGGTTGCGCCCAAATGGA+TGG + chr4.2:4584528-4584547 MS.gene048916:CDS 50.0%
AACGCAGGAAAACCACAGCT+GGG + chr4.2:4585099-4585118 MS.gene048916:CDS 50.0%
ACCCATATGAAGTGGAAGGG+AGG - chr4.2:4585075-4585094 None:intergenic 50.0%
ACCCTCCCTTCCACTTCATA+TGG + chr4.2:4585070-4585089 MS.gene048916:CDS 50.0%
ACTCCCATTGGTAGACACTG+GGG - chr4.2:4584327-4584346 None:intergenic 50.0%
CACCAAACATCCAAGGTGAG+AGG + chr4.2:4584642-4584661 MS.gene048916:intron 50.0%
CACCATATTCCCTTGGCACA+AGG + chr4.2:4584183-4584202 MS.gene048916:CDS 50.0%
CCACTGGATCAAGTGGGAAA+CGG - chr4.2:4585336-4585355 None:intergenic 50.0%
CCCATATGAAGTGGAAGGGA+GGG - chr4.2:4585074-4585093 None:intergenic 50.0%
CCCTCCCTTCCACTTCATAT+GGG + chr4.2:4585071-4585090 MS.gene048916:CDS 50.0%
CTCTGAGCGAGGACTTTGAT+GGG + chr4.2:4584348-4584367 MS.gene048916:CDS 50.0%
CTGTGAATCCCTTGTGCCAA+GGG - chr4.2:4584195-4584214 None:intergenic 50.0%
GAATCCCCAGTGTCTACCAA+TGG + chr4.2:4584320-4584339 MS.gene048916:CDS 50.0%
GACTCCCATTGGTAGACACT+GGG - chr4.2:4584328-4584347 None:intergenic 50.0%
GTAATGCCGGATTCTGAACG+AGG - chr4.2:4585262-4585281 None:intergenic 50.0%
TCAGAAAGGTTGCGCCCAAA+TGG + chr4.2:4584524-4584543 MS.gene048916:intron 50.0%
TCCCTTGTGCCAAGGGAATA+TGG - chr4.2:4584188-4584207 None:intergenic 50.0%
TCCTTGGCACCAAACATCCA+AGG + chr4.2:4584635-4584654 MS.gene048916:CDS 50.0%
TTGGTAGACACTGGGGATTC+CGG - chr4.2:4584320-4584339 None:intergenic 50.0%
! AGCTGTGACAGTAGCCTTGA+AGG + chr4.2:4584565-4584584 MS.gene048916:CDS 50.0%
!! ACCTTGGATGTTTGGTGCCA+AGG - chr4.2:4584639-4584658 None:intergenic 50.0%
CAACGCAGGAAAACCACAGC+TGG + chr4.2:4585098-4585117 MS.gene048916:CDS 55.0%
CCATCAAAGTCCTCGCTCAG+AGG - chr4.2:4584350-4584369 None:intergenic 55.0%
CCGTTTCCCACTTGATCCAG+TGG + chr4.2:4585333-4585352 MS.gene048916:CDS 55.0%
CCTCTGAGCGAGGACTTTGA+TGG + chr4.2:4584347-4584366 MS.gene048916:CDS 55.0%
CCTGTGAATCCCTTGTGCCA+AGG - chr4.2:4584196-4584215 None:intergenic 55.0%
CCTTGGCACAAGGGATTCAC+AGG + chr4.2:4584193-4584212 MS.gene048916:CDS 55.0%
GAAGTGGAAGGGAGGGTGAA+AGG - chr4.2:4585067-4585086 None:intergenic 55.0%
GGACTCCCATTGGTAGACAC+TGG - chr4.2:4584329-4584348 None:intergenic 55.0%
CAATGGGAGTCCTCTGAGCG+AGG + chr4.2:4584337-4584356 MS.gene048916:CDS 60.0%
CCCAGCAGTCCTGTGTGTTG+CGG - chr4.2:4584796-4584815 None:intergenic 60.0%
CCGCAACACACAGGACTGCT+GGG + chr4.2:4584793-4584812 MS.gene048916:CDS 60.0%
CTCGCTCAGAGGACTCCCAT+TGG - chr4.2:4584339-4584358 None:intergenic 60.0%
GCAGTCCTGTGTGTTGCGGA+AGG - chr4.2:4584792-4584811 None:intergenic 60.0%
GTGCACCTTCCGCAACACAC+AGG + chr4.2:4584784-4584803 MS.gene048916:CDS 60.0%
TCCGCAACACACAGGACTGC+TGG + chr4.2:4584792-4584811 MS.gene048916:CDS 60.0%
AGGCTGGCGGAACCCAGCTG+TGG - chr4.2:4585114-4585133 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr4.2 gene 4584089 4585402 4584089 ID=MS.gene048916
chr4.2 mRNA 4584089 4585402 4584089 ID=MS.gene048916.t1;Parent=MS.gene048916
chr4.2 exon 4584089 4584414 4584089 ID=MS.gene048916.t1.exon1;Parent=MS.gene048916.t1
chr4.2 CDS 4584089 4584414 4584089 ID=cds.MS.gene048916.t1;Parent=MS.gene048916.t1
chr4.2 exon 4584528 4584656 4584528 ID=MS.gene048916.t1.exon2;Parent=MS.gene048916.t1
chr4.2 CDS 4584528 4584656 4584528 ID=cds.MS.gene048916.t1;Parent=MS.gene048916.t1
chr4.2 exon 4584772 4585402 4584772 ID=MS.gene048916.t1.exon3;Parent=MS.gene048916.t1
chr4.2 CDS 4584772 4585402 4584772 ID=cds.MS.gene048916.t1;Parent=MS.gene048916.t1
Gene Sequence

>MS.gene048916

ATGGAGAATGAATGTAACTGGGAGCAAAACACACTCATCAATGAGTTAATTCAAGGGATGGATGTAGCAAAGAGATTGAAAGAAGACTTGAGGACACCATATTCCCTTGGCACAAGGGATTCACAGGTGCAGATGATACTGTCTTCTTATGAAAAGGCTTTACAAATTTTAAGATGTAATGAATCAACTTCTAAGTCACAGACAGTGACTCCAGTAATAACTTCGTTACCGGAATCCCCAGTGTCTACCAATGGGAGTCCTCTGAGCGAGGACTTTGATGGGACCTTCCAAGATCACCAAGAAGTTAAAAACAAATCAAAGAAAAGGTAAATTTATTAGACACACTTGGTAACAGTTTTATACCACAGAAATCAACTAATTTTTGGTTTATACTAAAACTCCTATGTCCTAACAATTTTTTACCTGAAATTGCTTTCAGAAAGGTTGCGCCCAAATGGATGGATCAGATAAGAGTGAGCTGTGACAGTAGCCTTGAAGGACCAAATGAAGATGGCTACAACTGGAGAAAATATGGTCAAAAAGATATCCTTGGCACCAAACATCCAAGGTGAGAGGAATTCTAATATCATGCTTAAGAAAAAATCATAAGAATTCTTAATGTATAAATTGCATTTACCTGTGAATGATGTCATCTCATTAACAACCCATTATGACAATTGCAGAAGTTACTATAGGTGCACCTTCCGCAACACACAGGACTGCTGGGCGACGAAGCAAGTGCAGAGATCAGATGAAGATCCGACAATATTTGACATAACTTATAGAGGAAAGCATACATGTTCTCAGGGAAACAATGCCATTGAGCCATATAAGTCACAAGAAAAACAAGAGAAACCCCACATCCATAATAATAATATTATTCACCATGCACAACAATCACAAGAAAGCTTTACAAATTTCAGCAACACCTTGACTGTGAAAACAGATAACCTGGGAAACGAAGAAATGACATGTCCTTTCACCCTCCCTTCCACTTCATATGGGTACACAACGCAGGAAAACCACAGCTGGGTTCCGCCAGCCTTAGAAAACGATTCCTTCTTGAGCAGTCTTTTCCAGACACACTTATTATCTCCAGCAACACCAGAATCAAACTATTTCTCATCTCCATCTTTCAACATGAATGACTTTGATGGGTTCTATAACAACCCTCGTTCAGAATCCGGCATTACGGAGATCATTTCCACCAATACATCAGTAACAAATTCTCCTATTCCCAATTTCCGTTTCCCACTTGATCCAGTGGAAATAGATCCAAATTTCCCTTTCAATACTCCAGGCTTTTTCTCCTAA
Protein sequence

>MS.gene048916.t1

MENECNWEQNTLINELIQGMDVAKRLKEDLRTPYSLGTRDSQVQMILSSYEKALQILRCNESTSKSQTVTPVITSLPESPVSTNGSPLSEDFDGTFQDHQEVKNKSKKRKVAPKWMDQIRVSCDSSLEGPNEDGYNWRKYGQKDILGTKHPRSYYRCTFRNTQDCWATKQVQRSDEDPTIFDITYRGKHTCSQGNNAIEPYKSQEKQEKPHIHNNNIIHHAQQSQESFTNFSNTLTVKTDNLGNEEMTCPFTLPSTSYGYTTQENHSWVPPALENDSFLSSLFQTHLLSPATPESNYFSSPSFNMNDFDGFYNNPRSESGITEIISTNTSVTNSPIPNFRFPLDPVEIDPNFPFNTPGFFS