Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06061.t1 | XP_013447178.1 | 98.1 | 361 | 7 | 0 | 1 | 361 | 1 | 361 | 8.10E-206 | 726.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06061.t1 | Q9SUP6 | 45.4 | 284 | 117 | 8 | 6 | 259 | 8 | 283 | 9.4e-54 | 212.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06061.t1 | A0A072U5T4 | 98.1 | 361 | 7 | 0 | 1 | 361 | 1 | 361 | 5.8e-206 | 726.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene06061.t1 | TF | WRKY |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051837 | MS.gene06061 | 0.846101 | 2.68E-59 | -1.69E-46 |
| MS.gene06061 | MS.gene061682 | 0.814124 | 1.81E-51 | -1.69E-46 |
| MS.gene06061 | MS.gene063094 | 0.832449 | 9.39E-56 | -1.69E-46 |
| MS.gene06061 | MS.gene067477 | 0.818187 | 2.23E-52 | -1.69E-46 |
| MS.gene06061 | MS.gene069576 | 0.949152 | 2.27E-107 | -1.69E-46 |
| MS.gene06061 | MS.gene20013 | 0.812727 | 3.67E-51 | -1.69E-46 |
| MS.gene06061 | MS.gene24855 | 0.820699 | 5.97E-53 | -1.69E-46 |
| MS.gene06061 | MS.gene24856 | 0.841971 | 3.44E-58 | -1.69E-46 |
| MS.gene06061 | MS.gene26489 | 0.841163 | 5.61E-58 | -1.69E-46 |
| MS.gene06061 | MS.gene36866 | 0.800794 | 1.22E-48 | -1.69E-46 |
| MS.gene06061 | MS.gene42130 | 0.820514 | 6.59E-53 | -1.69E-46 |
| MS.gene06061 | MS.gene49158 | 0.805625 | 1.22E-49 | -1.69E-46 |
| MS.gene06061 | MS.gene54188 | 0.829241 | 5.75E-55 | -1.69E-46 |
| MS.gene06061 | MS.gene55786 | 0.919484 | 4.25E-87 | -1.69E-46 |
| MS.gene06061 | MS.gene57601 | 0.834631 | 2.68E-56 | -1.69E-46 |
| MS.gene06061 | MS.gene58305 | 0.842205 | 2.98E-58 | -1.69E-46 |
| MS.gene06061 | MS.gene58307 | 0.819927 | 8.98E-53 | -1.69E-46 |
| MS.gene06061 | MS.gene64870 | 0.808737 | 2.67E-50 | -1.69E-46 |
| MS.gene06061 | MS.gene65315 | 0.812146 | 4.91E-51 | -1.69E-46 |
| MS.gene06061 | MS.gene68141 | 0.828854 | 7.13E-55 | -1.69E-46 |
| MS.gene06061 | MS.gene71734 | 0.877993 | 4.02E-69 | -1.69E-46 |
| MS.gene06061 | MS.gene73468 | 0.878919 | 1.90E-69 | -1.69E-46 |
| MS.gene06061 | MS.gene81604 | 0.82404 | 1.00E-53 | -1.69E-46 |
| MS.gene06061 | MS.gene82042 | 0.822135 | 2.79E-53 | -1.69E-46 |
| MS.gene06061 | MS.gene82549 | 0.827963 | 1.17E-54 | -1.69E-46 |
| MS.gene06061 | MS.gene86565 | 0.800186 | 1.62E-48 | -1.69E-46 |
| MS.gene06061 | MS.gene87017 | 0.822865 | 1.88E-53 | -1.69E-46 |
| MS.gene06061 | MS.gene90362 | 0.807294 | 5.42E-50 | -1.69E-46 |
| MS.gene06061 | MS.gene92946 | 0.8483 | 6.69E-60 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene06061 | MS.gene048916 | PPI |
| MS.gene06061 | MS.gene069576 | PPI |
| MS.gene06061 | MS.gene55786 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06061.t1 | MTR_8g099350 | 98.061 | 361 | 7 | 0 | 1 | 361 | 1 | 361 | 0.0 | 738 |
| MS.gene06061.t1 | MTR_7g117200 | 36.927 | 371 | 180 | 11 | 1 | 361 | 1 | 327 | 4.61e-57 | 189 |
| MS.gene06061.t1 | MTR_3g090860 | 38.564 | 376 | 163 | 17 | 12 | 361 | 7 | 340 | 4.03e-56 | 187 |
| MS.gene06061.t1 | MTR_8g027860 | 35.849 | 371 | 187 | 14 | 1 | 349 | 1 | 342 | 3.05e-51 | 174 |
| MS.gene06061.t1 | MTR_7g073430 | 32.178 | 202 | 105 | 5 | 1 | 191 | 1 | 181 | 9.04e-24 | 99.8 |
| MS.gene06061.t1 | MTR_5g067680 | 59.459 | 74 | 30 | 0 | 128 | 201 | 198 | 271 | 1.07e-23 | 100 |
| MS.gene06061.t1 | MTR_8g005750 | 33.511 | 188 | 99 | 5 | 13 | 198 | 6 | 169 | 1.42e-22 | 96.3 |
| MS.gene06061.t1 | MTR_2g075700 | 30.583 | 206 | 108 | 6 | 8 | 191 | 11 | 203 | 3.69e-22 | 95.9 |
| MS.gene06061.t1 | MTR_7g073380 | 32.143 | 196 | 95 | 5 | 9 | 191 | 12 | 182 | 3.15e-20 | 90.1 |
| MS.gene06061.t1 | MTR_2g075680 | 29.327 | 208 | 115 | 6 | 6 | 191 | 10 | 207 | 7.09e-20 | 89.4 |
| MS.gene06061.t1 | MTR_2g075690 | 30.144 | 209 | 119 | 5 | 1 | 191 | 1 | 200 | 5.93e-19 | 86.7 |
| MS.gene06061.t1 | MTR_0002s1250 | 28.718 | 195 | 101 | 5 | 13 | 196 | 8 | 175 | 7.92e-19 | 85.5 |
| MS.gene06061.t1 | MTR_2g075750 | 40.000 | 110 | 59 | 2 | 132 | 239 | 28 | 132 | 9.91e-19 | 83.2 |
| MS.gene06061.t1 | MTR_2g075610 | 53.333 | 60 | 28 | 0 | 132 | 191 | 29 | 88 | 2.08e-18 | 82.4 |
| MS.gene06061.t1 | MTR_5g067700 | 30.055 | 183 | 100 | 5 | 9 | 191 | 11 | 165 | 8.07e-18 | 82.0 |
| MS.gene06061.t1 | MTR_3g093830 | 31.694 | 183 | 97 | 5 | 18 | 191 | 23 | 186 | 3.07e-17 | 81.6 |
| MS.gene06061.t1 | MTR_7g062220 | 32.000 | 150 | 90 | 5 | 45 | 189 | 36 | 178 | 1.24e-15 | 77.0 |
| MS.gene06061.t1 | MTR_2g016770 | 33.571 | 140 | 84 | 4 | 106 | 244 | 9 | 140 | 1.54e-15 | 75.1 |
| MS.gene06061.t1 | MTR_8g028565 | 41.860 | 86 | 42 | 2 | 105 | 190 | 134 | 211 | 2.27e-15 | 76.6 |
| MS.gene06061.t1 | MTR_2g016770 | 36.207 | 116 | 65 | 4 | 130 | 244 | 25 | 132 | 5.45e-15 | 73.6 |
| MS.gene06061.t1 | MTR_3g009470 | 51.351 | 74 | 28 | 3 | 120 | 189 | 264 | 333 | 6.03e-15 | 76.6 |
| MS.gene06061.t1 | MTR_4g094588 | 53.521 | 71 | 25 | 2 | 132 | 197 | 178 | 245 | 6.89e-15 | 75.1 |
| MS.gene06061.t1 | MTR_7g079010 | 42.056 | 107 | 43 | 5 | 94 | 189 | 97 | 195 | 7.29e-15 | 73.2 |
| MS.gene06061.t1 | MTR_8g092140 | 52.308 | 65 | 28 | 1 | 132 | 196 | 160 | 221 | 7.31e-15 | 73.6 |
| MS.gene06061.t1 | MTR_3g009470 | 51.351 | 74 | 28 | 3 | 120 | 189 | 264 | 333 | 8.58e-15 | 75.9 |
| MS.gene06061.t1 | MTR_7g079040 | 42.353 | 85 | 41 | 2 | 105 | 189 | 133 | 209 | 1.61e-14 | 73.9 |
| MS.gene06061.t1 | MTR_3g095080 | 53.125 | 64 | 27 | 1 | 132 | 195 | 168 | 228 | 2.01e-14 | 72.4 |
| MS.gene06061.t1 | MTR_5g043880 | 43.750 | 96 | 50 | 2 | 95 | 189 | 86 | 178 | 2.37e-14 | 72.8 |
| MS.gene06061.t1 | MTR_3g095080 | 51.471 | 68 | 30 | 1 | 132 | 199 | 144 | 208 | 2.62e-14 | 71.6 |
| MS.gene06061.t1 | MTR_7g109800 | 57.627 | 59 | 22 | 1 | 132 | 190 | 145 | 200 | 2.64e-14 | 73.2 |
| MS.gene06061.t1 | MTR_3g108960 | 44.872 | 78 | 40 | 2 | 118 | 194 | 299 | 374 | 3.66e-14 | 73.6 |
| MS.gene06061.t1 | MTR_7g109600 | 33.775 | 151 | 88 | 3 | 106 | 246 | 24 | 172 | 3.83e-14 | 72.0 |
| MS.gene06061.t1 | MTR_5g073620 | 50.000 | 62 | 31 | 0 | 130 | 191 | 670 | 731 | 3.88e-14 | 74.3 |
| MS.gene06061.t1 | MTR_5g091390 | 55.172 | 58 | 23 | 1 | 132 | 189 | 157 | 211 | 6.02e-14 | 72.0 |
| MS.gene06061.t1 | MTR_5g016610 | 43.529 | 85 | 43 | 3 | 106 | 189 | 174 | 254 | 6.21e-14 | 71.6 |
| MS.gene06061.t1 | MTR_1g086790 | 42.222 | 90 | 44 | 2 | 101 | 190 | 132 | 213 | 6.21e-14 | 72.4 |
| MS.gene06061.t1 | MTR_8g032510 | 33.654 | 104 | 62 | 1 | 89 | 192 | 83 | 179 | 7.64e-14 | 71.6 |
| MS.gene06061.t1 | MTR_7g011820 | 44.048 | 84 | 39 | 2 | 106 | 189 | 389 | 464 | 8.69e-14 | 72.8 |
| MS.gene06061.t1 | MTR_7g011820 | 49.206 | 63 | 28 | 2 | 127 | 189 | 223 | 281 | 2.13e-13 | 71.6 |
| MS.gene06061.t1 | MTR_7g100510 | 46.575 | 73 | 35 | 2 | 117 | 189 | 174 | 242 | 1.05e-13 | 72.4 |
| MS.gene06061.t1 | MTR_7g100510 | 50.704 | 71 | 29 | 2 | 119 | 189 | 351 | 415 | 2.36e-13 | 71.2 |
| MS.gene06061.t1 | MTR_1g009613 | 32.787 | 122 | 68 | 4 | 71 | 189 | 207 | 317 | 1.79e-13 | 70.9 |
| MS.gene06061.t1 | MTR_8g087000 | 39.474 | 114 | 61 | 3 | 82 | 189 | 20 | 131 | 1.84e-13 | 69.7 |
| MS.gene06061.t1 | MTR_1g099600 | 38.144 | 97 | 50 | 3 | 96 | 189 | 151 | 240 | 2.05e-13 | 70.5 |
| MS.gene06061.t1 | MTR_6g053200 | 38.043 | 92 | 51 | 2 | 98 | 189 | 300 | 385 | 2.16e-13 | 71.6 |
| MS.gene06061.t1 | MTR_7g080020 | 55.172 | 58 | 22 | 2 | 132 | 189 | 280 | 333 | 2.99e-13 | 71.6 |
| MS.gene06061.t1 | MTR_4g107970 | 34.694 | 147 | 71 | 6 | 57 | 189 | 98 | 233 | 3.68e-13 | 70.9 |
| MS.gene06061.t1 | MTR_0117s0040 | 47.887 | 71 | 34 | 2 | 120 | 189 | 61 | 129 | 4.37e-13 | 68.6 |
| MS.gene06061.t1 | MTR_7g028415 | 54.237 | 59 | 24 | 1 | 132 | 190 | 93 | 148 | 4.87e-13 | 67.0 |
| MS.gene06061.t1 | MTR_7g028710 | 54.237 | 59 | 24 | 1 | 132 | 190 | 93 | 148 | 4.87e-13 | 67.0 |
| MS.gene06061.t1 | MTR_2g033820 | 52.542 | 59 | 25 | 1 | 132 | 190 | 203 | 258 | 5.97e-13 | 69.7 |
| MS.gene06061.t1 | MTR_4g082580 | 47.619 | 63 | 30 | 1 | 127 | 189 | 140 | 199 | 7.48e-13 | 69.3 |
| MS.gene06061.t1 | MTR_4g082580 | 53.448 | 58 | 24 | 1 | 132 | 189 | 278 | 332 | 4.31e-12 | 67.0 |
| MS.gene06061.t1 | MTR_4g107970 | 34.694 | 147 | 71 | 6 | 57 | 189 | 175 | 310 | 7.63e-13 | 70.1 |
| MS.gene06061.t1 | MTR_7g110720 | 49.315 | 73 | 34 | 2 | 118 | 189 | 174 | 244 | 1.24e-12 | 68.9 |
| MS.gene06061.t1 | MTR_7g110720 | 49.315 | 73 | 34 | 2 | 118 | 189 | 201 | 271 | 1.33e-12 | 68.9 |
| MS.gene06061.t1 | MTR_8g007270 | 40.000 | 90 | 46 | 2 | 100 | 189 | 127 | 208 | 1.43e-12 | 67.0 |
| MS.gene06061.t1 | MTR_8g087000 | 51.667 | 60 | 27 | 1 | 130 | 189 | 75 | 132 | 1.51e-12 | 67.0 |
| MS.gene06061.t1 | MTR_8g098945 | 43.077 | 65 | 35 | 1 | 125 | 189 | 122 | 184 | 1.64e-12 | 67.4 |
| MS.gene06061.t1 | MTR_1g070455 | 49.123 | 57 | 27 | 1 | 133 | 189 | 294 | 348 | 1.96e-12 | 68.2 |
| MS.gene06061.t1 | MTR_3g053330 | 35.484 | 124 | 62 | 5 | 77 | 200 | 207 | 312 | 1.98e-12 | 68.6 |
| MS.gene06061.t1 | MTR_4g094908 | 47.368 | 57 | 28 | 1 | 133 | 189 | 267 | 321 | 2.07e-12 | 67.8 |
| MS.gene06061.t1 | MTR_7g071120 | 55.172 | 58 | 22 | 2 | 132 | 189 | 166 | 219 | 3.04e-12 | 68.2 |
| MS.gene06061.t1 | MTR_4g013260 | 32.857 | 140 | 77 | 4 | 132 | 263 | 184 | 314 | 3.06e-12 | 68.2 |
| MS.gene06061.t1 | MTR_4g013260 | 48.276 | 58 | 27 | 1 | 132 | 189 | 336 | 390 | 9.23e-11 | 63.5 |
| MS.gene06061.t1 | MTR_5g042920 | 51.724 | 58 | 25 | 1 | 132 | 189 | 320 | 374 | 3.17e-12 | 67.8 |
| MS.gene06061.t1 | MTR_5g042920 | 49.206 | 63 | 28 | 2 | 127 | 189 | 146 | 204 | 1.25e-11 | 65.9 |
| MS.gene06061.t1 | MTR_7g080000 | 46.970 | 66 | 31 | 2 | 132 | 197 | 234 | 295 | 3.49e-12 | 68.2 |
| MS.gene06061.t1 | MTR_8g096730 | 44.828 | 58 | 29 | 1 | 132 | 189 | 70 | 124 | 4.20e-12 | 63.9 |
| MS.gene06061.t1 | MTR_5g074400 | 51.724 | 58 | 24 | 2 | 132 | 189 | 243 | 296 | 5.06e-12 | 67.4 |
| MS.gene06061.t1 | MTR_5g094430 | 50.000 | 58 | 26 | 1 | 132 | 189 | 364 | 418 | 5.13e-12 | 67.4 |
| MS.gene06061.t1 | MTR_5g094430 | 49.254 | 67 | 28 | 3 | 125 | 189 | 191 | 253 | 4.38e-11 | 64.7 |
| MS.gene06061.t1 | MTR_3g031220 | 51.724 | 58 | 24 | 2 | 132 | 189 | 198 | 251 | 5.30e-12 | 67.0 |
| MS.gene06061.t1 | MTR_2g083870 | 33.051 | 118 | 69 | 2 | 72 | 189 | 28 | 135 | 5.44e-12 | 65.9 |
| MS.gene06061.t1 | MTR_8g069935 | 37.931 | 87 | 48 | 2 | 103 | 189 | 306 | 386 | 6.57e-12 | 67.0 |
| MS.gene06061.t1 | MTR_1g013760 | 50.877 | 57 | 26 | 1 | 133 | 189 | 141 | 195 | 6.92e-12 | 65.9 |
| MS.gene06061.t1 | MTR_2g105060 | 47.059 | 68 | 32 | 2 | 122 | 189 | 86 | 149 | 7.02e-12 | 65.1 |
| MS.gene06061.t1 | MTR_3g031220 | 51.724 | 58 | 24 | 2 | 132 | 189 | 198 | 251 | 7.17e-12 | 67.0 |
| MS.gene06061.t1 | MTR_3g031220 | 49.153 | 59 | 27 | 1 | 132 | 190 | 365 | 420 | 7.75e-11 | 63.5 |
| MS.gene06061.t1 | MTR_3g056100 | 50.000 | 58 | 26 | 1 | 132 | 189 | 402 | 456 | 7.87e-12 | 67.0 |
| MS.gene06061.t1 | MTR_5g094430 | 50.000 | 58 | 26 | 1 | 132 | 189 | 230 | 284 | 7.87e-12 | 66.6 |
| MS.gene06061.t1 | MTR_5g094430 | 49.254 | 67 | 28 | 3 | 125 | 189 | 57 | 119 | 5.81e-11 | 63.9 |
| MS.gene06061.t1 | MTR_5g094430 | 50.000 | 58 | 26 | 1 | 132 | 189 | 252 | 306 | 8.21e-12 | 66.6 |
| MS.gene06061.t1 | MTR_5g094430 | 49.254 | 67 | 28 | 3 | 125 | 189 | 79 | 141 | 5.46e-11 | 63.9 |
| MS.gene06061.t1 | MTR_2g088000 | 46.835 | 79 | 39 | 2 | 112 | 189 | 328 | 404 | 8.32e-12 | 67.0 |
| MS.gene06061.t1 | MTR_2g105060 | 47.059 | 68 | 32 | 2 | 122 | 189 | 161 | 224 | 8.45e-12 | 65.9 |
| MS.gene06061.t1 | MTR_4g127040 | 40.449 | 89 | 48 | 3 | 106 | 193 | 220 | 304 | 8.51e-12 | 65.9 |
| MS.gene06061.t1 | MTR_3g056100 | 50.000 | 58 | 26 | 1 | 132 | 189 | 415 | 469 | 8.80e-12 | 66.6 |
| MS.gene06061.t1 | MTR_3g056100 | 50.000 | 58 | 26 | 1 | 132 | 189 | 258 | 312 | 1.22e-11 | 65.9 |
| MS.gene06061.t1 | MTR_3g056100 | 50.000 | 58 | 26 | 1 | 132 | 189 | 271 | 325 | 1.32e-11 | 65.9 |
| MS.gene06061.t1 | MTR_2g032030 | 50.877 | 57 | 26 | 1 | 133 | 189 | 268 | 322 | 1.42e-11 | 65.9 |
| MS.gene06061.t1 | MTR_2g032030 | 50.877 | 57 | 26 | 1 | 133 | 189 | 268 | 322 | 2.14e-11 | 65.5 |
| MS.gene06061.t1 | MTR_7g009730 | 45.205 | 73 | 37 | 2 | 118 | 189 | 204 | 274 | 2.67e-11 | 65.1 |
| MS.gene06061.t1 | MTR_3g106060 | 41.250 | 80 | 43 | 3 | 111 | 189 | 117 | 193 | 3.18e-11 | 63.9 |
| MS.gene06061.t1 | MTR_8g067635 | 46.552 | 58 | 29 | 1 | 132 | 189 | 349 | 404 | 4.74e-11 | 64.3 |
| MS.gene06061.t1 | MTR_8g067650 | 38.043 | 92 | 41 | 3 | 103 | 189 | 314 | 394 | 4.81e-11 | 64.3 |
| MS.gene06061.t1 | MTR_1g078260 | 46.575 | 73 | 32 | 3 | 119 | 190 | 237 | 303 | 5.22e-11 | 64.3 |
| MS.gene06061.t1 | MTR_4g122530 | 48.276 | 58 | 27 | 1 | 132 | 189 | 208 | 262 | 5.68e-11 | 63.9 |
| MS.gene06061.t1 | MTR_2g024380 | 30.986 | 142 | 88 | 4 | 74 | 213 | 199 | 332 | 9.55e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06061.t1 | AT4G11070 | 39.669 | 363 | 143 | 12 | 6 | 353 | 5 | 306 | 2.62e-66 | 212 |
| MS.gene06061.t1 | AT4G23810 | 44.912 | 285 | 119 | 7 | 5 | 259 | 7 | 283 | 1.13e-64 | 208 |
| MS.gene06061.t1 | AT4G11070 | 39.045 | 356 | 123 | 11 | 6 | 353 | 5 | 274 | 4.36e-63 | 203 |
| MS.gene06061.t1 | AT5G24110 | 39.234 | 209 | 93 | 7 | 7 | 205 | 10 | 194 | 6.26e-36 | 133 |
| MS.gene06061.t1 | AT2G46400 | 32.534 | 292 | 154 | 8 | 8 | 295 | 4 | 256 | 8.68e-35 | 129 |
| MS.gene06061.t1 | AT3G56400 | 36.464 | 181 | 102 | 5 | 12 | 191 | 11 | 179 | 2.59e-25 | 104 |
| MS.gene06061.t1 | AT2G40740 | 58.065 | 62 | 26 | 0 | 130 | 191 | 171 | 232 | 3.17e-20 | 90.1 |
| MS.gene06061.t1 | AT2G40740 | 58.065 | 62 | 26 | 0 | 130 | 191 | 180 | 241 | 4.00e-20 | 89.7 |
| MS.gene06061.t1 | AT2G40750 | 33.333 | 171 | 96 | 3 | 40 | 201 | 63 | 224 | 9.25e-20 | 89.7 |
| MS.gene06061.t1 | AT1G66550 | 35.862 | 145 | 81 | 4 | 54 | 191 | 23 | 162 | 1.19e-17 | 82.0 |
| MS.gene06061.t1 | AT1G66550 | 51.471 | 68 | 32 | 1 | 124 | 191 | 101 | 167 | 3.60e-17 | 80.5 |
| MS.gene06061.t1 | AT2G37260 | 36.567 | 134 | 72 | 3 | 61 | 189 | 198 | 323 | 3.07e-16 | 79.3 |
| MS.gene06061.t1 | AT2G37260 | 36.567 | 134 | 72 | 3 | 61 | 189 | 196 | 321 | 3.11e-16 | 79.3 |
| MS.gene06061.t1 | AT5G45260 | 57.895 | 57 | 24 | 0 | 133 | 189 | 1209 | 1265 | 3.63e-16 | 80.5 |
| MS.gene06061.t1 | AT2G37260 | 36.567 | 134 | 72 | 3 | 61 | 189 | 278 | 403 | 3.71e-16 | 79.7 |
| MS.gene06061.t1 | AT5G52830 | 46.512 | 86 | 39 | 2 | 105 | 190 | 143 | 221 | 1.25e-15 | 77.4 |
| MS.gene06061.t1 | AT1G66600 | 41.860 | 86 | 47 | 1 | 106 | 191 | 80 | 162 | 2.00e-15 | 75.5 |
| MS.gene06061.t1 | AT4G01250 | 41.860 | 86 | 42 | 2 | 104 | 189 | 106 | 183 | 2.43e-15 | 76.3 |
| MS.gene06061.t1 | AT4G18170 | 44.681 | 94 | 48 | 2 | 97 | 189 | 136 | 226 | 3.66e-15 | 75.9 |
| MS.gene06061.t1 | AT1G29860 | 58.621 | 58 | 21 | 1 | 132 | 189 | 136 | 190 | 4.46e-15 | 75.1 |
| MS.gene06061.t1 | AT5G41570 | 39.231 | 130 | 66 | 7 | 77 | 204 | 51 | 169 | 7.89e-15 | 72.4 |
| MS.gene06061.t1 | AT4G31550 | 34.783 | 138 | 68 | 5 | 73 | 193 | 172 | 304 | 1.11e-14 | 74.7 |
| MS.gene06061.t1 | AT1G64000 | 45.333 | 75 | 36 | 2 | 132 | 204 | 114 | 185 | 2.12e-14 | 71.6 |
| MS.gene06061.t1 | AT5G22570 | 30.570 | 193 | 114 | 4 | 4 | 196 | 2 | 174 | 2.26e-14 | 73.2 |
| MS.gene06061.t1 | AT5G49520 | 54.237 | 59 | 24 | 1 | 132 | 190 | 221 | 276 | 2.74e-14 | 73.9 |
| MS.gene06061.t1 | AT1G69310 | 42.857 | 91 | 43 | 3 | 103 | 193 | 123 | 204 | 3.51e-14 | 72.8 |
| MS.gene06061.t1 | AT1G69310 | 42.857 | 91 | 43 | 3 | 103 | 193 | 123 | 204 | 3.51e-14 | 72.8 |
| MS.gene06061.t1 | AT1G69310 | 42.857 | 91 | 43 | 3 | 103 | 193 | 123 | 204 | 3.51e-14 | 72.8 |
| MS.gene06061.t1 | AT1G66560 | 48.333 | 60 | 31 | 0 | 132 | 191 | 103 | 162 | 3.97e-14 | 72.0 |
| MS.gene06061.t1 | AT5G46350 | 55.172 | 58 | 23 | 1 | 132 | 189 | 183 | 237 | 6.62e-14 | 72.4 |
| MS.gene06061.t1 | AT1G80590 | 45.455 | 66 | 36 | 0 | 133 | 198 | 86 | 151 | 8.91e-14 | 70.5 |
| MS.gene06061.t1 | AT1G29280 | 53.333 | 60 | 26 | 1 | 130 | 189 | 72 | 129 | 1.21e-13 | 70.5 |
| MS.gene06061.t1 | AT4G04450 | 45.349 | 86 | 44 | 2 | 105 | 189 | 170 | 253 | 1.29e-13 | 72.0 |
| MS.gene06061.t1 | AT5G01900 | 47.458 | 59 | 31 | 0 | 133 | 191 | 111 | 169 | 1.51e-13 | 70.5 |
| MS.gene06061.t1 | AT2G03340 | 35.897 | 117 | 57 | 3 | 132 | 248 | 415 | 513 | 1.53e-13 | 72.0 |
| MS.gene06061.t1 | AT2G03340 | 50.000 | 60 | 26 | 2 | 130 | 189 | 248 | 303 | 1.65e-11 | 65.9 |
| MS.gene06061.t1 | AT2G23320 | 41.176 | 85 | 45 | 3 | 106 | 189 | 215 | 295 | 1.75e-13 | 70.9 |
| MS.gene06061.t1 | AT4G31550 | 51.613 | 62 | 26 | 2 | 133 | 193 | 247 | 305 | 1.90e-13 | 70.9 |
| MS.gene06061.t1 | AT4G39410 | 51.515 | 66 | 27 | 2 | 132 | 196 | 223 | 284 | 2.33e-13 | 70.5 |
| MS.gene06061.t1 | AT4G04450 | 45.349 | 86 | 44 | 2 | 105 | 189 | 264 | 347 | 2.96e-13 | 71.2 |
| MS.gene06061.t1 | AT2G38470 | 43.333 | 90 | 47 | 2 | 100 | 189 | 152 | 237 | 3.05e-13 | 71.2 |
| MS.gene06061.t1 | AT4G26440 | 53.125 | 64 | 26 | 2 | 130 | 193 | 176 | 235 | 4.39e-13 | 70.9 |
| MS.gene06061.t1 | AT4G26440 | 50.847 | 59 | 26 | 1 | 132 | 190 | 372 | 427 | 4.27e-11 | 64.7 |
| MS.gene06061.t1 | AT2G47260 | 43.820 | 89 | 46 | 2 | 103 | 190 | 144 | 229 | 4.78e-13 | 69.7 |
| MS.gene06061.t1 | AT2G44745 | 41.758 | 91 | 43 | 3 | 101 | 189 | 117 | 199 | 5.92e-13 | 67.8 |
| MS.gene06061.t1 | AT5G56270 | 55.000 | 60 | 23 | 2 | 130 | 189 | 271 | 326 | 7.10e-13 | 70.5 |
| MS.gene06061.t1 | AT3G01080 | 55.000 | 60 | 23 | 2 | 130 | 189 | 203 | 258 | 8.19e-13 | 68.9 |
| MS.gene06061.t1 | AT2G24570 | 38.835 | 103 | 57 | 4 | 89 | 189 | 200 | 298 | 1.07e-12 | 68.6 |
| MS.gene06061.t1 | AT5G07100 | 51.724 | 58 | 25 | 1 | 132 | 189 | 141 | 195 | 1.32e-12 | 67.0 |
| MS.gene06061.t1 | AT5G07100 | 45.763 | 59 | 29 | 1 | 131 | 189 | 23 | 78 | 1.98e-11 | 63.5 |
| MS.gene06061.t1 | AT5G07100 | 51.724 | 58 | 25 | 1 | 132 | 189 | 141 | 195 | 1.32e-12 | 67.0 |
| MS.gene06061.t1 | AT5G07100 | 45.763 | 59 | 29 | 1 | 131 | 189 | 23 | 78 | 1.98e-11 | 63.5 |
| MS.gene06061.t1 | AT5G07100 | 51.724 | 58 | 25 | 1 | 132 | 189 | 141 | 195 | 1.32e-12 | 67.0 |
| MS.gene06061.t1 | AT5G07100 | 45.763 | 59 | 29 | 1 | 131 | 189 | 23 | 78 | 1.98e-11 | 63.5 |
| MS.gene06061.t1 | AT5G07100 | 51.724 | 58 | 25 | 1 | 132 | 189 | 141 | 195 | 1.32e-12 | 67.0 |
| MS.gene06061.t1 | AT5G07100 | 45.763 | 59 | 29 | 1 | 131 | 189 | 23 | 78 | 1.98e-11 | 63.5 |
| MS.gene06061.t1 | AT5G07100 | 51.724 | 58 | 25 | 1 | 132 | 189 | 234 | 288 | 1.35e-12 | 68.2 |
| MS.gene06061.t1 | AT5G07100 | 45.763 | 59 | 29 | 1 | 131 | 189 | 116 | 171 | 2.01e-11 | 64.7 |
| MS.gene06061.t1 | AT4G24240 | 42.353 | 85 | 44 | 3 | 106 | 189 | 256 | 336 | 1.36e-12 | 68.6 |
| MS.gene06061.t1 | AT1G13960 | 51.724 | 58 | 25 | 1 | 132 | 189 | 409 | 463 | 1.39e-12 | 69.3 |
| MS.gene06061.t1 | AT1G13960 | 47.619 | 63 | 29 | 2 | 127 | 189 | 224 | 282 | 5.94e-12 | 67.4 |
| MS.gene06061.t1 | AT2G25000 | 50.000 | 58 | 27 | 1 | 132 | 189 | 103 | 158 | 1.49e-12 | 67.0 |
| MS.gene06061.t1 | AT2G25000 | 50.000 | 58 | 27 | 1 | 132 | 189 | 103 | 158 | 1.49e-12 | 67.0 |
| MS.gene06061.t1 | AT1G62300 | 45.679 | 81 | 41 | 2 | 110 | 189 | 289 | 367 | 1.55e-12 | 68.9 |
| MS.gene06061.t1 | AT3G01080 | 55.000 | 60 | 23 | 2 | 130 | 189 | 203 | 258 | 1.87e-12 | 68.6 |
| MS.gene06061.t1 | AT3G01080 | 51.724 | 58 | 25 | 1 | 132 | 189 | 344 | 398 | 5.23e-12 | 67.4 |
| MS.gene06061.t1 | AT2G46130 | 42.667 | 75 | 38 | 2 | 132 | 204 | 30 | 101 | 2.08e-12 | 63.5 |
| MS.gene06061.t1 | AT2G25000 | 50.000 | 58 | 27 | 1 | 132 | 189 | 125 | 180 | 2.20e-12 | 66.6 |
| MS.gene06061.t1 | AT3G01080 | 55.000 | 60 | 23 | 2 | 130 | 189 | 165 | 220 | 2.25e-12 | 68.2 |
| MS.gene06061.t1 | AT3G01080 | 51.724 | 58 | 25 | 1 | 132 | 189 | 306 | 360 | 7.12e-12 | 66.6 |
| MS.gene06061.t1 | AT3G58710 | 31.176 | 170 | 82 | 6 | 76 | 237 | 22 | 164 | 2.41e-12 | 67.0 |
| MS.gene06061.t1 | AT1G13960 | 51.724 | 58 | 25 | 1 | 132 | 189 | 256 | 310 | 2.92e-12 | 67.8 |
| MS.gene06061.t1 | AT1G13960 | 47.619 | 63 | 29 | 2 | 127 | 189 | 71 | 129 | 1.11e-11 | 65.9 |
| MS.gene06061.t1 | AT2G25000 | 50.000 | 58 | 27 | 1 | 132 | 189 | 146 | 201 | 3.07e-12 | 66.6 |
| MS.gene06061.t1 | AT2G34830 | 42.857 | 91 | 41 | 3 | 103 | 189 | 196 | 279 | 3.09e-12 | 67.8 |
| MS.gene06061.t1 | AT2G34830 | 42.857 | 91 | 41 | 3 | 103 | 189 | 187 | 270 | 3.13e-12 | 67.8 |
| MS.gene06061.t1 | AT5G28650 | 40.476 | 84 | 47 | 2 | 106 | 189 | 237 | 317 | 3.33e-12 | 67.4 |
| MS.gene06061.t1 | AT4G23550 | 50.877 | 57 | 26 | 1 | 133 | 189 | 141 | 195 | 3.39e-12 | 67.0 |
| MS.gene06061.t1 | AT2G30250 | 52.632 | 57 | 24 | 1 | 133 | 189 | 329 | 382 | 4.85e-12 | 67.0 |
| MS.gene06061.t1 | AT4G26640 | 44.000 | 75 | 33 | 2 | 132 | 200 | 341 | 412 | 4.94e-12 | 67.4 |
| MS.gene06061.t1 | AT4G26640 | 53.448 | 58 | 23 | 2 | 132 | 189 | 171 | 224 | 2.56e-11 | 65.1 |
| MS.gene06061.t1 | AT4G26640 | 44.000 | 75 | 33 | 2 | 132 | 200 | 381 | 452 | 5.65e-12 | 67.4 |
| MS.gene06061.t1 | AT4G26640 | 53.448 | 58 | 23 | 2 | 132 | 189 | 211 | 264 | 2.77e-11 | 65.1 |
| MS.gene06061.t1 | AT4G26640 | 44.000 | 75 | 33 | 2 | 132 | 200 | 309 | 380 | 6.04e-12 | 67.0 |
| MS.gene06061.t1 | AT4G26640 | 53.448 | 58 | 23 | 2 | 132 | 189 | 139 | 192 | 2.97e-11 | 65.1 |
| MS.gene06061.t1 | AT5G13080 | 50.847 | 59 | 26 | 1 | 132 | 190 | 67 | 122 | 6.85e-12 | 63.2 |
| MS.gene06061.t1 | AT3G58710 | 36.111 | 108 | 58 | 3 | 130 | 237 | 69 | 165 | 7.64e-12 | 65.5 |
| MS.gene06061.t1 | AT2G04880 | 50.877 | 57 | 25 | 1 | 133 | 189 | 284 | 337 | 7.67e-12 | 66.6 |
| MS.gene06061.t1 | AT2G04880 | 35.714 | 140 | 74 | 5 | 62 | 189 | 29 | 164 | 8.79e-11 | 63.5 |
| MS.gene06061.t1 | AT4G26640 | 44.000 | 75 | 33 | 2 | 132 | 200 | 205 | 276 | 8.09e-12 | 66.2 |
| MS.gene06061.t1 | AT4G26640 | 53.448 | 58 | 23 | 2 | 132 | 189 | 35 | 88 | 3.28e-11 | 64.7 |
| MS.gene06061.t1 | AT4G26640 | 44.000 | 75 | 33 | 2 | 132 | 200 | 205 | 276 | 8.09e-12 | 66.2 |
| MS.gene06061.t1 | AT4G26640 | 53.448 | 58 | 23 | 2 | 132 | 189 | 35 | 88 | 3.28e-11 | 64.7 |
| MS.gene06061.t1 | AT4G26640 | 44.000 | 75 | 33 | 2 | 132 | 200 | 205 | 276 | 8.09e-12 | 66.2 |
| MS.gene06061.t1 | AT4G26640 | 53.448 | 58 | 23 | 2 | 132 | 189 | 35 | 88 | 3.28e-11 | 64.7 |
| MS.gene06061.t1 | AT4G26640 | 44.000 | 75 | 33 | 2 | 132 | 200 | 205 | 276 | 8.09e-12 | 66.2 |
| MS.gene06061.t1 | AT4G26640 | 53.448 | 58 | 23 | 2 | 132 | 189 | 35 | 88 | 3.28e-11 | 64.7 |
| MS.gene06061.t1 | AT2G04880 | 50.877 | 57 | 25 | 1 | 133 | 189 | 308 | 361 | 8.62e-12 | 66.6 |
| MS.gene06061.t1 | AT2G04880 | 35.714 | 140 | 74 | 5 | 62 | 189 | 29 | 164 | 6.57e-11 | 63.9 |
| MS.gene06061.t1 | AT1G18860 | 47.368 | 76 | 37 | 2 | 115 | 189 | 221 | 294 | 9.42e-12 | 66.6 |
| MS.gene06061.t1 | AT4G31800 | 48.276 | 58 | 28 | 1 | 132 | 189 | 111 | 166 | 1.08e-11 | 64.7 |
| MS.gene06061.t1 | AT5G15130 | 36.667 | 120 | 57 | 5 | 73 | 192 | 143 | 243 | 1.39e-11 | 66.2 |
| MS.gene06061.t1 | AT2G30590 | 33.945 | 109 | 68 | 3 | 82 | 189 | 263 | 368 | 1.45e-11 | 65.5 |
| MS.gene06061.t1 | AT4G31800 | 48.276 | 58 | 28 | 1 | 132 | 189 | 176 | 231 | 1.49e-11 | 65.1 |
| MS.gene06061.t1 | AT5G15130 | 36.667 | 120 | 57 | 5 | 73 | 192 | 185 | 285 | 1.51e-11 | 65.9 |
| MS.gene06061.t1 | AT3G04670 | 39.286 | 84 | 48 | 2 | 106 | 189 | 237 | 317 | 1.53e-11 | 65.1 |
| MS.gene06061.t1 | AT5G45050 | 45.714 | 70 | 36 | 1 | 120 | 189 | 1029 | 1096 | 1.80e-11 | 66.2 |
| MS.gene06061.t1 | AT5G45050 | 45.714 | 70 | 36 | 1 | 120 | 189 | 1168 | 1235 | 1.89e-11 | 66.2 |
| MS.gene06061.t1 | AT5G43290 | 36.842 | 114 | 65 | 3 | 116 | 226 | 98 | 207 | 2.02e-11 | 64.3 |
| MS.gene06061.t1 | AT5G45050 | 45.714 | 70 | 36 | 1 | 120 | 189 | 1140 | 1207 | 2.03e-11 | 66.2 |
| MS.gene06061.t1 | AT1G30650 | 42.857 | 91 | 41 | 3 | 103 | 189 | 189 | 272 | 2.26e-11 | 65.1 |
| MS.gene06061.t1 | AT1G68150 | 29.897 | 194 | 115 | 7 | 8 | 189 | 106 | 290 | 4.67e-11 | 63.9 |
| MS.gene06061.t1 | AT4G01720 | 54.386 | 57 | 24 | 1 | 133 | 189 | 240 | 294 | 6.14e-11 | 63.9 |
Find 96 sgRNAs with CRISPR-Local
Find 117 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTGAATAATATTATTATTA+TGG | 0.201295 | 4.1:-4730074 | None:intergenic |
| GGAGTATTGAAAGGGAAATT+TGG | 0.255776 | 4.1:-4730486 | None:intergenic |
| TTCCCCTCACCTTGGATGTT+TGG | 0.266100 | 4.1:-4729766 | None:intergenic |
| ATCAAGTGGGAAACGGAAAT+TGG | 0.267866 | 4.1:-4730448 | None:intergenic |
| ACCTTCCCTTCCACTTCATA+TGG | 0.287302 | 4.1:+4730192 | MS.gene06061:CDS |
| AAATGGAGAATGAATGTAAC+TGG | 0.315765 | 4.1:+4729208 | None:intergenic |
| TCCCTTGTGCCAAGGGAATA+TGG | 0.341878 | 4.1:-4729306 | None:intergenic |
| GATGAGAAATAGTTTGATTC+TGG | 0.343483 | 4.1:-4730315 | None:intergenic |
| TAGTTTGATTCTGGTGTTGC+TGG | 0.345432 | 4.1:-4730306 | None:intergenic |
| TTGGTAGACGCTGGGGATTC+CGG | 0.347235 | 4.1:-4729438 | None:intergenic |
| GGCTACAACTGGAGAAAATA+TGG | 0.354359 | 4.1:+4729723 | MS.gene06061:CDS |
| TCCGCAACACACAGGACTGC+TGG | 0.367448 | 4.1:+4729914 | MS.gene06061:CDS |
| CATCTTCATTTGGTCCTTCA+AGG | 0.372550 | 4.1:-4729701 | None:intergenic |
| TCTTATCTGATCCATCCATT+TGG | 0.372776 | 4.1:-4729661 | None:intergenic |
| TCCGGTAACGAAGTTATTAC+TGG | 0.373162 | 4.1:-4729420 | None:intergenic |
| CTTATCTGATCCATCCATTT+GGG | 0.376482 | 4.1:-4729660 | None:intergenic |
| CAGTTGTAGCCATCTTCATT+TGG | 0.394723 | 4.1:-4729711 | None:intergenic |
| TCCAGTAATAACTTCGTTAC+CGG | 0.409442 | 4.1:+4729419 | MS.gene06061:CDS |
| TTCAACATGAATGACTTTGA+TGG | 0.415973 | 4.1:+4730345 | MS.gene06061:CDS |
| AGGAAAGCATACATGTTCTC+AGG | 0.418553 | 4.1:+4729996 | MS.gene06061:CDS |
| AACAACCCTCGTTCAGAATC+CGG | 0.427607 | 4.1:+4730375 | MS.gene06061:CDS |
| TAATATTATTATTATGGATG+TGG | 0.435488 | 4.1:-4730068 | None:intergenic |
| GATACTATCTTCTTATGAAA+AGG | 0.436019 | 4.1:+4729344 | MS.gene06061:CDS |
| AATATTATTATTATGGATGT+GGG | 0.437122 | 4.1:-4730067 | None:intergenic |
| TCGTTCAGAATCCGGCATTA+CGG | 0.438155 | 4.1:+4730383 | MS.gene06061:CDS |
| AAATTTGGATCTATTTCCAC+TGG | 0.446466 | 4.1:-4730471 | None:intergenic |
| CCTTCCCTTCCACTTCATAT+GGG | 0.447528 | 4.1:+4730193 | MS.gene06061:CDS |
| CTGGAGATAATAAGTGTGTC+TGG | 0.447945 | 4.1:-4730287 | None:intergenic |
| AGAATTTGTTACTGATGTAT+TGG | 0.449729 | 4.1:-4730418 | None:intergenic |
| CCTCTGAGCGAGGACTTTGA+TGG | 0.453832 | 4.1:+4729468 | MS.gene06061:CDS |
| ACCTTGGATGTTTGGTGCCA+AGG | 0.456940 | 4.1:-4729758 | None:intergenic |
| TTGTGACTTATATGGCTCAA+TGG | 0.457594 | 4.1:-4730028 | None:intergenic |
| AACTTCTTGGTGATCTTGGA+AGG | 0.459080 | 4.1:-4729493 | None:intergenic |
| TCAGAAAGGTTGCGCCCAAA+TGG | 0.459805 | 4.1:+4729646 | MS.gene06061:intron |
| TCAAGTGGGAAACGGAAATT+GGG | 0.461042 | 4.1:-4730447 | None:intergenic |
| AGCTGTGACAGTAGCCTTGA+AGG | 0.468608 | 4.1:+4729687 | MS.gene06061:CDS |
| GACTCCCATTGGTAGACGCT+GGG | 0.469167 | 4.1:-4729446 | None:intergenic |
| CTCATCAATGAGTTAATTCA+AGG | 0.471281 | 4.1:+4729243 | MS.gene06061:CDS |
| CAAATGAAGATGGCTACAAC+TGG | 0.475643 | 4.1:+4729712 | MS.gene06061:CDS |
| TCAACATGAATGACTTTGAT+GGG | 0.485787 | 4.1:+4730346 | MS.gene06061:CDS |
| AATTTCCCTTTCAATACTCC+AGG | 0.487060 | 4.1:+4730489 | MS.gene06061:CDS |
| GGGAAACGGAAATTGGGAAT+AGG | 0.487728 | 4.1:-4730441 | None:intergenic |
| ATATTTGACATAACTTATAG+AGG | 0.489229 | 4.1:+4729976 | MS.gene06061:CDS |
| ATGTCATTTCTTCGTTTCCC+AGG | 0.491525 | 4.1:-4730161 | None:intergenic |
| CAACGCAGGAAAACCACAGC+TGG | 0.492451 | 4.1:+4730220 | MS.gene06061:CDS |
| GACTGTGAAAACAGATAACC+TGG | 0.505158 | 4.1:+4730143 | MS.gene06061:CDS |
| AAGTCATTCATGTTGAAAGA+TGG | 0.505789 | 4.1:-4730339 | None:intergenic |
| CTCTGAGCGAGGACTTTGAT+GGG | 0.512988 | 4.1:+4729469 | MS.gene06061:CDS |
| ATTTGTTACTGATGTATTGG+TGG | 0.517341 | 4.1:-4730415 | None:intergenic |
| GGAAATGATCTCCGTAATGC+CGG | 0.517483 | 4.1:-4730394 | None:intergenic |
| CCTTGGCACAAGGGATTCAC+AGG | 0.521370 | 4.1:+4729314 | MS.gene06061:CDS |
| CCGCAACACACAGGACTGCT+GGG | 0.524602 | 4.1:+4729915 | MS.gene06061:CDS |
| AAAGGTTGCGCCCAAATGGA+TGG | 0.526632 | 4.1:+4729650 | MS.gene06061:CDS |
| CCACTGGATCAAGTGGGAAA+CGG | 0.528076 | 4.1:-4730455 | None:intergenic |
| CTGTGAATCCCTTGTGCCAA+GGG | 0.529447 | 4.1:-4729313 | None:intergenic |
| CACCATATTCCCTTGGCACA+AGG | 0.530203 | 4.1:+4729304 | MS.gene06061:CDS |
| GAATCCCCAGCGTCTACCAA+TGG | 0.531265 | 4.1:+4729441 | MS.gene06061:CDS |
| CCCAGCAGTCCTGTGTGTTG+CGG | 0.534772 | 4.1:-4729915 | None:intergenic |
| CCGTTTCCCACTTGATCCAG+TGG | 0.535887 | 4.1:+4730455 | MS.gene06061:CDS |
| TAAGTTATGTCAAATATTGT+CGG | 0.537763 | 4.1:-4729970 | None:intergenic |
| AATCCCCAGCGTCTACCAAT+GGG | 0.538110 | 4.1:+4729442 | MS.gene06061:CDS |
| TTTCTTGTGATTGTTGTGCA+TGG | 0.548111 | 4.1:-4730095 | None:intergenic |
| GGACTCCCATTGGTAGACGC+TGG | 0.553945 | 4.1:-4729447 | None:intergenic |
| GAAGTGGAAGGGAAGGTGAA+AGG | 0.559123 | 4.1:-4730186 | None:intergenic |
| TTGAGGACACCATATTCCCT+TGG | 0.560526 | 4.1:+4729297 | MS.gene06061:CDS |
| AAAAGCCTGGAGTATTGAAA+GGG | 0.560663 | 4.1:-4730494 | None:intergenic |
| GGAAAGCATACATGTTCTCA+GGG | 0.560758 | 4.1:+4729997 | MS.gene06061:CDS |
| CTGGAAAAGACTGCTCAAGA+AGG | 0.564100 | 4.1:-4730268 | None:intergenic |
| CTTGAAGGACCAAATGAAGA+TGG | 0.570659 | 4.1:+4729702 | MS.gene06061:CDS |
| CCCATATGAAGTGGAAGGGA+AGG | 0.572985 | 4.1:-4730193 | None:intergenic |
| TCTATTTCCACTGGATCAAG+TGG | 0.573162 | 4.1:-4730462 | None:intergenic |
| CAATGAGTTAATTCAAGGGA+TGG | 0.575038 | 4.1:+4729248 | MS.gene06061:CDS |
| CTCGCTCAGAGGACTCCCAT+TGG | 0.583201 | 4.1:-4729457 | None:intergenic |
| GTGTACCCATATGAAGTGGA+AGG | 0.589053 | 4.1:-4730198 | None:intergenic |
| GCAGTCCTGTGTGTTGCGGA+AGG | 0.591799 | 4.1:-4729911 | None:intergenic |
| ACCATATTCCCTTGGCACAA+GGG | 0.601275 | 4.1:+4729305 | MS.gene06061:CDS |
| AGGCTGGCGGAACCCAGCTG+TGG | 0.617131 | 4.1:-4730233 | None:intergenic |
| ATATTATTATTATGGATGTG+GGG | 0.623210 | 4.1:-4730066 | None:intergenic |
| TTCATATGGGTACACAACGC+AGG | 0.623458 | 4.1:+4730206 | MS.gene06061:CDS |
| ACAATTGCAGAAGTTACTAT+CGG | 0.623705 | 4.1:+4729884 | MS.gene06061:intron |
| CCATCAAAGTCCTCGCTCAG+AGG | 0.628233 | 4.1:-4729468 | None:intergenic |
| CCTGTGAATCCCTTGTGCCA+AGG | 0.629078 | 4.1:-4729314 | None:intergenic |
| CGTTGTGTACCCATATGAAG+TGG | 0.630275 | 4.1:-4730202 | None:intergenic |
| TCCTTGGCACCAAACATCCA+AGG | 0.635439 | 4.1:+4729757 | MS.gene06061:CDS |
| AACGCAGGAAAACCACAGCT+GGG | 0.639928 | 4.1:+4730221 | MS.gene06061:CDS |
| CAATGGGAGTCCTCTGAGCG+AGG | 0.641184 | 4.1:+4729458 | MS.gene06061:CDS |
| GTAATGCCGGATTCTGAACG+AGG | 0.646895 | 4.1:-4730381 | None:intergenic |
| AGAGATTGAAAGAAGACTTG+AGG | 0.648506 | 4.1:+4729280 | MS.gene06061:CDS |
| TGTACCCATATGAAGTGGAA+GGG | 0.653842 | 4.1:-4730197 | None:intergenic |
| AATGGAGAATGAATGTAACT+GGG | 0.656029 | 4.1:+4729209 | None:intergenic |
| TCATCAATGAGTTAATTCAA+GGG | 0.662966 | 4.1:+4729244 | MS.gene06061:CDS |
| GTGCACCTTCCGCAACACAC+AGG | 0.675108 | 4.1:+4729906 | MS.gene06061:CDS |
| CTATTTCCACTGGATCAAGT+GGG | 0.677998 | 4.1:-4730461 | None:intergenic |
| ACTCCCATTGGTAGACGCTG+GGG | 0.692667 | 4.1:-4729445 | None:intergenic |
| TAATGCCGGATTCTGAACGA+GGG | 0.706809 | 4.1:-4730380 | None:intergenic |
| ACTGTGAAAACAGATAACCT+GGG | 0.720036 | 4.1:+4730144 | MS.gene06061:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATTATTATTATGGATGT+GGG | - | chr4.1:4730070-4730089 | None:intergenic | 15.0% |
| !! | GGTGAATAATATTATTATTA+TGG | - | chr4.1:4730077-4730096 | None:intergenic | 15.0% |
| !! | TAATATTATTATTATGGATG+TGG | - | chr4.1:4730071-4730090 | None:intergenic | 15.0% |
| !! | TTAAAAACAAATCAAAGAAA+AGG | + | chr4.1:4729514-4729533 | MS.gene06061:CDS | 15.0% |
| !! | AAAAAAAATTGTTAGGACAT+AGG | - | chr4.1:4729613-4729632 | None:intergenic | 20.0% |
| !! | ATATTATTATTATGGATGTG+GGG | - | chr4.1:4730069-4730088 | None:intergenic | 20.0% |
| !! | ATATTTGACATAACTTATAG+AGG | + | chr4.1:4729976-4729995 | MS.gene06061:CDS | 20.0% |
| !! | TAAGTTATGTCAAATATTGT+CGG | - | chr4.1:4729973-4729992 | None:intergenic | 20.0% |
| !! | TTTCAGGAAAAAAAATTGTT+AGG | - | chr4.1:4729620-4729639 | None:intergenic | 20.0% |
| !!! | TTGATTTGTTTTTAACTTCT+TGG | - | chr4.1:4729509-4729528 | None:intergenic | 20.0% |
| ! | GATACTATCTTCTTATGAAA+AGG | + | chr4.1:4729344-4729363 | MS.gene06061:CDS | 25.0% |
| ! | TCATCAATGAGTTAATTCAA+GGG | + | chr4.1:4729244-4729263 | MS.gene06061:CDS | 25.0% |
| !! | CAAAAATTAGTTGATTTCTG+TGG | - | chr4.1:4729575-4729594 | None:intergenic | 25.0% |
| !! | CACAGAAATCAACTAATTTT+TGG | + | chr4.1:4729573-4729592 | MS.gene06061:intron | 25.0% |
| !! | TGTTTTTCTTGTGACTTATA+TGG | - | chr4.1:4730039-4730058 | None:intergenic | 25.0% |
| !!! | AGAATTTGTTACTGATGTAT+TGG | - | chr4.1:4730421-4730440 | None:intergenic | 25.0% |
| AAATTTGGATCTATTTCCAC+TGG | - | chr4.1:4730474-4730493 | None:intergenic | 30.0% | |
| AACTTCTGCAATTGTCATAA+TGG | - | chr4.1:4729879-4729898 | None:intergenic | 30.0% | |
| AAGTCATTCATGTTGAAAGA+TGG | - | chr4.1:4730342-4730361 | None:intergenic | 30.0% | |
| ACAATTGCAGAAGTTACTAT+CGG | + | chr4.1:4729884-4729903 | MS.gene06061:intron | 30.0% | |
| ACTTCTGCAATTGTCATAAT+GGG | - | chr4.1:4729878-4729897 | None:intergenic | 30.0% | |
| CTCATCAATGAGTTAATTCA+AGG | + | chr4.1:4729243-4729262 | MS.gene06061:CDS | 30.0% | |
| GATGAGAAATAGTTTGATTC+TGG | - | chr4.1:4730318-4730337 | None:intergenic | 30.0% | |
| TATGGTCAAAAAGATATCCT+TGG | + | chr4.1:4729741-4729760 | MS.gene06061:CDS | 30.0% | |
| TCAACATGAATGACTTTGAT+GGG | + | chr4.1:4730346-4730365 | MS.gene06061:CDS | 30.0% | |
| TTCAACATGAATGACTTTGA+TGG | + | chr4.1:4730345-4730364 | MS.gene06061:CDS | 30.0% | |
| ! | ATTTGTTACTGATGTATTGG+TGG | - | chr4.1:4730418-4730437 | None:intergenic | 30.0% |
| !!! | TTTTAACTTCTTGGTGATCT+TGG | - | chr4.1:4729500-4729519 | None:intergenic | 30.0% |
| AATGAGATGACATCATTCAC+AGG | - | chr4.1:4729850-4729869 | None:intergenic | 35.0% | |
| AATTTCCCTTTCAATACTCC+AGG | + | chr4.1:4730489-4730508 | MS.gene06061:CDS | 35.0% | |
| ACTGTGAAAACAGATAACCT+GGG | + | chr4.1:4730144-4730163 | MS.gene06061:CDS | 35.0% | |
| AGAGATTGAAAGAAGACTTG+AGG | + | chr4.1:4729280-4729299 | MS.gene06061:CDS | 35.0% | |
| CAATGAGTTAATTCAAGGGA+TGG | + | chr4.1:4729248-4729267 | MS.gene06061:CDS | 35.0% | |
| CTTATCTGATCCATCCATTT+GGG | - | chr4.1:4729663-4729682 | None:intergenic | 35.0% | |
| TCCAGTAATAACTTCGTTAC+CGG | + | chr4.1:4729419-4729438 | MS.gene06061:CDS | 35.0% | |
| TCCTGAAATTGCTTTCAGAA+AGG | + | chr4.1:4729632-4729651 | MS.gene06061:intron | 35.0% | |
| TCTTATCTGATCCATCCATT+TGG | - | chr4.1:4729664-4729683 | None:intergenic | 35.0% | |
| TTGTGACTTATATGGCTCAA+TGG | - | chr4.1:4730031-4730050 | None:intergenic | 35.0% | |
| TTTCTTGTGATTGTTGTGCA+TGG | - | chr4.1:4730098-4730117 | None:intergenic | 35.0% | |
| ! | ACCTTTCTGAAAGCAATTTC+AGG | - | chr4.1:4729636-4729655 | None:intergenic | 35.0% |
| ! | CAAGAAGGAATCGTTTTCTA+AGG | - | chr4.1:4730256-4730275 | None:intergenic | 35.0% |
| ! | GTTATCTGTTTTCACAGTCA+AGG | - | chr4.1:4730142-4730161 | None:intergenic | 35.0% |
| !! | AAAAAGCCTGGAGTATTGAA+AGG | - | chr4.1:4730498-4730517 | None:intergenic | 35.0% |
| !! | AAAAGCCTGGAGTATTGAAA+GGG | - | chr4.1:4730497-4730516 | None:intergenic | 35.0% |
| !! | GGAGTATTGAAAGGGAAATT+TGG | - | chr4.1:4730489-4730508 | None:intergenic | 35.0% |
| ATCAAGTGGGAAACGGAAAT+TGG | - | chr4.1:4730451-4730470 | None:intergenic | 40.0% | |
| CAAATGAAGATGGCTACAAC+TGG | + | chr4.1:4729712-4729731 | MS.gene06061:CDS | 40.0% | |
| CAGTTGTAGCCATCTTCATT+TGG | - | chr4.1:4729714-4729733 | None:intergenic | 40.0% | |
| CATCTTCATTTGGTCCTTCA+AGG | - | chr4.1:4729704-4729723 | None:intergenic | 40.0% | |
| CTATTTCCACTGGATCAAGT+GGG | - | chr4.1:4730464-4730483 | None:intergenic | 40.0% | |
| CTGGAGATAATAAGTGTGTC+TGG | - | chr4.1:4730290-4730309 | None:intergenic | 40.0% | |
| CTTGAAGGACCAAATGAAGA+TGG | + | chr4.1:4729702-4729721 | MS.gene06061:CDS | 40.0% | |
| GACTGTGAAAACAGATAACC+TGG | + | chr4.1:4730143-4730162 | MS.gene06061:CDS | 40.0% | |
| GGCTACAACTGGAGAAAATA+TGG | + | chr4.1:4729723-4729742 | MS.gene06061:CDS | 40.0% | |
| TATTAGAATTCCCCTCACCT+TGG | - | chr4.1:4729777-4729796 | None:intergenic | 40.0% | |
| TCAAGTGGGAAACGGAAATT+GGG | - | chr4.1:4730450-4730469 | None:intergenic | 40.0% | |
| TCCGGTAACGAAGTTATTAC+TGG | - | chr4.1:4729423-4729442 | None:intergenic | 40.0% | |
| TCTATTTCCACTGGATCAAG+TGG | - | chr4.1:4730465-4730484 | None:intergenic | 40.0% | |
| TGTACCCATATGAAGTGGAA+GGG | - | chr4.1:4730200-4730219 | None:intergenic | 40.0% | |
| ! | AACTTCTTGGTGATCTTGGA+AGG | - | chr4.1:4729496-4729515 | None:intergenic | 40.0% |
| ! | AGGAAAGCATACATGTTCTC+AGG | + | chr4.1:4729996-4730015 | MS.gene06061:CDS | 40.0% |
| ! | ATGTCATTTCTTCGTTTCCC+AGG | - | chr4.1:4730164-4730183 | None:intergenic | 40.0% |
| ! | GGAAAGCATACATGTTCTCA+GGG | + | chr4.1:4729997-4730016 | MS.gene06061:CDS | 40.0% |
| !! | TAGTTTGATTCTGGTGTTGC+TGG | - | chr4.1:4730309-4730328 | None:intergenic | 40.0% |
| !!! | AAGGAATCGTTTTCTAAGGC+TGG | - | chr4.1:4730252-4730271 | None:intergenic | 40.0% |
| AACAACCCTCGTTCAGAATC+CGG | + | chr4.1:4730375-4730394 | MS.gene06061:CDS | 45.0% | |
| ACCATATTCCCTTGGCACAA+GGG | + | chr4.1:4729305-4729324 | MS.gene06061:CDS | 45.0% | |
| ACCTTCCCTTCCACTTCATA+TGG | + | chr4.1:4730192-4730211 | MS.gene06061:CDS | 45.0% | |
| CCTTCCCTTCCACTTCATAT+GGG | + | chr4.1:4730193-4730212 | MS.gene06061:CDS | 45.0% | |
| CGTTGTGTACCCATATGAAG+TGG | - | chr4.1:4730205-4730224 | None:intergenic | 45.0% | |
| CTGGAAAAGACTGCTCAAGA+AGG | - | chr4.1:4730271-4730290 | None:intergenic | 45.0% | |
| GGAAATGATCTCCGTAATGC+CGG | - | chr4.1:4730397-4730416 | None:intergenic | 45.0% | |
| GGGAAACGGAAATTGGGAAT+AGG | - | chr4.1:4730444-4730463 | None:intergenic | 45.0% | |
| GTGTACCCATATGAAGTGGA+AGG | - | chr4.1:4730201-4730220 | None:intergenic | 45.0% | |
| TAATGCCGGATTCTGAACGA+GGG | - | chr4.1:4730383-4730402 | None:intergenic | 45.0% | |
| TCGTTCAGAATCCGGCATTA+CGG | + | chr4.1:4730383-4730402 | MS.gene06061:CDS | 45.0% | |
| TTCATATGGGTACACAACGC+AGG | + | chr4.1:4730206-4730225 | MS.gene06061:CDS | 45.0% | |
| TTGAGGACACCATATTCCCT+TGG | + | chr4.1:4729297-4729316 | MS.gene06061:CDS | 45.0% | |
| !!! | GAATCGTTTTCTAAGGCTGG+CGG | - | chr4.1:4730249-4730268 | None:intergenic | 45.0% |
| AAAGGTTGCGCCCAAATGGA+TGG | + | chr4.1:4729650-4729669 | MS.gene06061:CDS | 50.0% | |
| AACGCAGGAAAACCACAGCT+GGG | + | chr4.1:4730221-4730240 | MS.gene06061:CDS | 50.0% | |
| AATCCCCAGCGTCTACCAAT+GGG | + | chr4.1:4729442-4729461 | MS.gene06061:CDS | 50.0% | |
| CACCAAACATCCAAGGTGAG+GGG | + | chr4.1:4729764-4729783 | MS.gene06061:intron | 50.0% | |
| CACCATATTCCCTTGGCACA+AGG | + | chr4.1:4729304-4729323 | MS.gene06061:CDS | 50.0% | |
| CCACTGGATCAAGTGGGAAA+CGG | - | chr4.1:4730458-4730477 | None:intergenic | 50.0% | |
| CCCATATGAAGTGGAAGGGA+AGG | - | chr4.1:4730196-4730215 | None:intergenic | 50.0% | |
| CTCTGAGCGAGGACTTTGAT+GGG | + | chr4.1:4729469-4729488 | MS.gene06061:CDS | 50.0% | |
| CTGTGAATCCCTTGTGCCAA+GGG | - | chr4.1:4729316-4729335 | None:intergenic | 50.0% | |
| GAAGTGGAAGGGAAGGTGAA+AGG | - | chr4.1:4730189-4730208 | None:intergenic | 50.0% | |
| GCACCAAACATCCAAGGTGA+GGG | + | chr4.1:4729763-4729782 | MS.gene06061:intron | 50.0% | |
| GTAATGCCGGATTCTGAACG+AGG | - | chr4.1:4730384-4730403 | None:intergenic | 50.0% | |
| TCAGAAAGGTTGCGCCCAAA+TGG | + | chr4.1:4729646-4729665 | MS.gene06061:intron | 50.0% | |
| TCCCTTGTGCCAAGGGAATA+TGG | - | chr4.1:4729309-4729328 | None:intergenic | 50.0% | |
| TCCTTGGCACCAAACATCCA+AGG | + | chr4.1:4729757-4729776 | MS.gene06061:CDS | 50.0% | |
| TTCCCCTCACCTTGGATGTT+TGG | - | chr4.1:4729769-4729788 | None:intergenic | 50.0% | |
| ! | AGCTGTGACAGTAGCCTTGA+AGG | + | chr4.1:4729687-4729706 | MS.gene06061:CDS | 50.0% |
| !! | ACCTTGGATGTTTGGTGCCA+AGG | - | chr4.1:4729761-4729780 | None:intergenic | 50.0% |
| ACTCCCATTGGTAGACGCTG+GGG | - | chr4.1:4729448-4729467 | None:intergenic | 55.0% | |
| CAACGCAGGAAAACCACAGC+TGG | + | chr4.1:4730220-4730239 | MS.gene06061:CDS | 55.0% | |
| CCATCAAAGTCCTCGCTCAG+AGG | - | chr4.1:4729471-4729490 | None:intergenic | 55.0% | |
| CCGTTTCCCACTTGATCCAG+TGG | + | chr4.1:4730455-4730474 | MS.gene06061:CDS | 55.0% | |
| CCTCTGAGCGAGGACTTTGA+TGG | + | chr4.1:4729468-4729487 | MS.gene06061:CDS | 55.0% | |
| CCTGTGAATCCCTTGTGCCA+AGG | - | chr4.1:4729317-4729336 | None:intergenic | 55.0% | |
| CCTTGGCACAAGGGATTCAC+AGG | + | chr4.1:4729314-4729333 | MS.gene06061:CDS | 55.0% | |
| GAATCCCCAGCGTCTACCAA+TGG | + | chr4.1:4729441-4729460 | MS.gene06061:CDS | 55.0% | |
| GACTCCCATTGGTAGACGCT+GGG | - | chr4.1:4729449-4729468 | None:intergenic | 55.0% | |
| GGCACCAAACATCCAAGGTG+AGG | + | chr4.1:4729762-4729781 | MS.gene06061:intron | 55.0% | |
| TTGGTAGACGCTGGGGATTC+CGG | - | chr4.1:4729441-4729460 | None:intergenic | 55.0% | |
| CAATGGGAGTCCTCTGAGCG+AGG | + | chr4.1:4729458-4729477 | MS.gene06061:CDS | 60.0% | |
| CCCAGCAGTCCTGTGTGTTG+CGG | - | chr4.1:4729918-4729937 | None:intergenic | 60.0% | |
| CCGCAACACACAGGACTGCT+GGG | + | chr4.1:4729915-4729934 | MS.gene06061:CDS | 60.0% | |
| CTCGCTCAGAGGACTCCCAT+TGG | - | chr4.1:4729460-4729479 | None:intergenic | 60.0% | |
| GCAGTCCTGTGTGTTGCGGA+AGG | - | chr4.1:4729914-4729933 | None:intergenic | 60.0% | |
| GGACTCCCATTGGTAGACGC+TGG | - | chr4.1:4729450-4729469 | None:intergenic | 60.0% | |
| GTGCACCTTCCGCAACACAC+AGG | + | chr4.1:4729906-4729925 | MS.gene06061:CDS | 60.0% | |
| TCCGCAACACACAGGACTGC+TGG | + | chr4.1:4729914-4729933 | MS.gene06061:CDS | 60.0% | |
| AGGCTGGCGGAACCCAGCTG+TGG | - | chr4.1:4730236-4730255 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 4729210 | 4730524 | 4729210 | ID=MS.gene06061 |
| chr4.1 | mRNA | 4729210 | 4730524 | 4729210 | ID=MS.gene06061.t1;Parent=MS.gene06061 |
| chr4.1 | exon | 4729210 | 4729535 | 4729210 | ID=MS.gene06061.t1.exon1;Parent=MS.gene06061.t1 |
| chr4.1 | CDS | 4729210 | 4729535 | 4729210 | ID=cds.MS.gene06061.t1;Parent=MS.gene06061.t1 |
| chr4.1 | exon | 4729650 | 4729778 | 4729650 | ID=MS.gene06061.t1.exon2;Parent=MS.gene06061.t1 |
| chr4.1 | CDS | 4729650 | 4729778 | 4729650 | ID=cds.MS.gene06061.t1;Parent=MS.gene06061.t1 |
| chr4.1 | exon | 4729894 | 4730524 | 4729894 | ID=MS.gene06061.t1.exon3;Parent=MS.gene06061.t1 |
| chr4.1 | CDS | 4729894 | 4730524 | 4729894 | ID=cds.MS.gene06061.t1;Parent=MS.gene06061.t1 |
| Gene Sequence |
| Protein sequence |
