AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene049155

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene049155.t1 MTR_8g104655 89.267 382 24 1 1 365 160 541 0.0 683
MS.gene049155.t1 MTR_8g104645 89.431 369 22 1 14 365 4 372 0.0 660
MS.gene049155.t1 MTR_8g104580 80.366 382 25 3 1 365 152 500 0.0 589
MS.gene049155.t1 MTR_0618s0020 95.175 228 11 0 138 365 1 228 5.93e-167 465
MS.gene049155.t1 MTR_4g025690 56.283 382 125 6 1 365 157 513 4.34e-147 426
MS.gene049155.t1 MTR_4g025730 54.974 382 129 7 1 365 154 509 2.60e-141 411
MS.gene049155.t1 MTR_4g025670 59.810 316 108 2 69 365 174 489 3.45e-140 407
MS.gene049155.t1 MTR_7g108905 51.459 377 159 4 2 361 183 552 1.32e-135 398
MS.gene049155.t1 MTR_3g008640 51.169 385 148 6 1 365 163 527 4.93e-133 390
MS.gene049155.t1 MTR_7g053360 55.162 339 130 3 45 365 193 527 1.86e-132 389
MS.gene049155.t1 MTR_3g033690 55.457 339 129 3 45 365 192 526 2.39e-132 389
MS.gene049155.t1 MTR_3g008720 50.781 384 151 5 1 365 163 527 1.16e-131 387
MS.gene049155.t1 MTR_7g050870 50.518 386 159 6 1 365 180 554 5.96e-131 386
MS.gene049155.t1 MTR_3g008700 55.000 340 129 4 45 365 193 527 8.13e-131 385
MS.gene049155.t1 MTR_2g044880 49.733 374 159 4 9 365 164 525 1.17e-126 374
MS.gene049155.t1 MTR_8g042900 51.688 385 148 7 2 365 214 581 6.13e-126 374
MS.gene049155.t1 MTR_8g023310 49.869 381 162 5 8 365 215 589 6.74e-126 374
MS.gene049155.t1 MTR_7g050950 53.779 344 135 5 41 365 215 553 1.74e-125 372
MS.gene049155.t1 MTR_4g035980 47.520 383 171 4 1 365 169 539 2.51e-125 371
MS.gene049155.t1 MTR_1g008140 48.196 388 168 8 2 365 229 607 1.12e-123 369
MS.gene049155.t1 MTR_7g050980 52.786 341 138 4 44 365 219 555 2.17e-123 367
MS.gene049155.t1 MTR_3g091380 48.320 387 168 6 2 365 220 597 2.53e-123 368
MS.gene049155.t1 MTR_4g087980 50.882 340 144 3 43 365 183 516 2.17e-120 358
MS.gene049155.t1 MTR_7g112580 47.656 384 163 6 2 365 177 542 3.33e-119 355
MS.gene049155.t1 MTR_7g108900 50.708 353 143 4 39 361 205 556 9.03e-119 355
MS.gene049155.t1 MTR_1g083520 49.471 378 164 7 9 365 157 528 7.84e-118 352
MS.gene049155.t1 MTR_7g108890 52.395 334 138 4 51 365 231 562 1.24e-117 352
MS.gene049155.t1 MTR_7g108875 47.583 393 176 5 2 365 173 564 1.78e-117 352
MS.gene049155.t1 MTR_3g010780 48.052 385 161 7 2 365 208 574 2.72e-117 352
MS.gene049155.t1 MTR_1g088020 52.537 335 138 4 51 365 222 555 3.64e-116 348
MS.gene049155.t1 MTR_1g054880 51.497 334 141 4 51 365 227 558 1.64e-114 344
MS.gene049155.t1 MTR_4g087970 48.529 340 152 3 43 365 184 517 3.04e-113 340
MS.gene049155.t1 MTR_8g042910 49.245 331 148 3 54 365 283 612 1.92e-112 340
MS.gene049155.t1 MTR_4g124550 45.855 386 171 7 7 365 219 593 4.34e-111 337
MS.gene049155.t1 MTR_1g088225 51.642 335 139 5 51 365 222 553 1.62e-110 333
MS.gene049155.t1 MTR_1g086210 47.059 357 156 5 38 365 217 569 4.95e-110 333
MS.gene049155.t1 MTR_4g124520 45.288 382 170 9 4 365 159 521 1.07e-108 328
MS.gene049155.t1 MTR_8g023150 47.135 384 170 9 1 365 213 582 2.51e-107 326
MS.gene049155.t1 MTR_0458s0030 56.705 261 95 2 122 365 55 314 2.04e-106 315
MS.gene049155.t1 MTR_1g088040 56.705 261 95 2 122 365 55 314 2.04e-106 315
MS.gene049155.t1 MTR_2g044810 43.272 379 179 6 4 365 175 534 2.33e-106 322
MS.gene049155.t1 MTR_3g010770 46.269 335 159 4 50 365 243 575 7.46e-104 317
MS.gene049155.t1 MTR_2g044660 49.379 322 140 5 61 365 317 632 3.37e-103 317
MS.gene049155.t1 MTR_1g086190 41.406 384 200 7 2 365 185 563 1.18e-98 303
MS.gene049155.t1 MTR_1g083470 41.885 382 193 7 1 361 193 566 9.94e-97 299
MS.gene049155.t1 MTR_1g083500 41.885 382 193 7 1 361 193 566 9.94e-97 299
MS.gene049155.t1 MTR_1g083490 41.099 382 196 7 1 361 198 571 1.80e-95 296
MS.gene049155.t1 MTR_4g005170 41.361 382 195 7 1 361 198 571 4.65e-95 296
MS.gene049155.t1 MTR_4g120290 43.864 383 183 9 7 364 196 571 2.54e-94 293
MS.gene049155.t1 MTR_4g120280 44.156 385 179 10 7 364 196 571 3.51e-94 293
MS.gene049155.t1 MTR_7g112590 41.147 401 189 8 1 364 192 582 1.40e-93 291
MS.gene049155.t1 MTR_7g110490 42.051 390 193 6 2 360 182 569 1.20e-92 288
MS.gene049155.t1 MTR_7g110510 42.051 390 193 6 2 360 182 569 1.20e-92 288
MS.gene049155.t1 MTR_1g083510 39.163 406 193 9 1 364 189 582 8.84e-92 286
MS.gene049155.t1 MTR_4g005180 40.314 382 199 7 1 361 180 553 1.47e-91 285
MS.gene049155.t1 MTR_2g436040 41.643 353 171 8 35 361 199 542 1.86e-88 278
MS.gene049155.t1 MTR_7g110440 40.302 397 200 7 2 365 182 574 3.61e-88 277
MS.gene049155.t1 MTR_2g044810 51.739 230 110 1 136 365 237 465 3.97e-87 271
MS.gene049155.t1 MTR_7g110560 37.958 382 205 6 2 365 182 549 1.54e-86 272
MS.gene049155.t1 MTR_8g093460 43.614 321 148 7 68 359 229 545 1.32e-84 267
MS.gene049155.t1 MTR_8g088610 38.279 337 181 4 44 361 44 372 1.99e-81 253
MS.gene049155.t1 MTR_3g095920 38.308 402 191 9 3 358 167 557 5.39e-81 258
MS.gene049155.t1 MTR_5g083620 40.058 342 181 7 43 365 20 356 1.88e-78 245
MS.gene049155.t1 MTR_7g107180 40.129 309 169 5 68 365 4 307 5.11e-78 242
MS.gene049155.t1 MTR_2g436050 40.857 350 177 6 38 364 221 563 7.46e-78 249
MS.gene049155.t1 MTR_2g105560 39.344 305 171 5 70 365 40 339 1.40e-77 242
MS.gene049155.t1 MTR_7g110420 39.678 373 177 8 38 365 217 586 2.56e-74 241
MS.gene049155.t1 MTR_7g110430 37.119 361 157 7 38 365 217 540 9.19e-66 218
MS.gene049155.t1 MTR_7g111560 35.604 323 174 7 71 365 240 556 4.70e-59 200
MS.gene049155.t1 MTR_0458s0010 38.209 335 149 8 51 365 222 518 2.57e-56 192
MS.gene049155.t1 MTR_2g039530 38.961 308 149 8 44 331 30 318 6.15e-54 181
MS.gene049155.t1 MTR_5g083590 33.016 315 142 6 69 365 5 268 2.89e-52 175
MS.gene049155.t1 MTR_6g024165 33.974 312 160 9 71 354 41 334 1.03e-48 167
MS.gene049155.t1 MTR_6g088810 34.868 304 154 7 79 354 90 377 4.60e-47 164
MS.gene049155.t1 MTR_6g012800 30.844 308 171 5 71 351 6 298 3.89e-46 160
MS.gene049155.t1 MTR_6g042660 33.451 284 156 6 62 327 28 296 7.15e-46 159
MS.gene049155.t1 MTR_8g102380 33.866 313 161 7 72 354 81 377 3.37e-45 159
MS.gene049155.t1 MTR_7g011530 30.864 324 176 7 73 363 8 316 3.05e-44 155
MS.gene049155.t1 MTR_1g086540 29.773 309 174 6 73 354 52 344 1.24e-42 152
MS.gene049155.t1 MTR_7g092780 29.319 382 219 9 1 355 31 388 7.07e-41 148
MS.gene049155.t1 MTR_6g042690 33.333 291 152 8 62 327 30 303 7.11e-41 147
MS.gene049155.t1 MTR_7g102600 27.807 374 208 10 2 327 10 369 1.18e-38 142
MS.gene049155.t1 MTR_1g033050 29.000 300 174 6 79 358 26 306 1.78e-38 140
MS.gene049155.t1 MTR_8g102380 34.241 257 126 5 72 298 81 324 3.60e-38 139
MS.gene049155.t1 MTR_5g088280 31.773 299 172 7 71 355 39 319 5.10e-37 136
MS.gene049155.t1 MTR_5g088290 31.333 300 173 7 71 355 48 329 5.06e-36 134
MS.gene049155.t1 MTR_5g088300 31.773 299 172 7 71 355 37 317 9.21e-36 133
MS.gene049155.t1 MTR_5g093970 30.132 302 180 7 71 355 43 330 3.72e-34 129
MS.gene049155.t1 MTR_4g124740 29.355 310 169 11 71 354 54 339 4.45e-34 129
MS.gene049155.t1 MTR_4g051810 29.299 314 191 7 56 355 22 318 4.54e-33 125
MS.gene049155.t1 MTR_5g095490 29.316 307 172 6 77 354 67 357 5.09e-33 126
MS.gene049155.t1 MTR_5g012600 29.010 293 164 7 66 327 56 335 1.52e-30 120
MS.gene049155.t1 MTR_4g074290 28.623 276 163 6 71 324 71 334 2.68e-30 119
MS.gene049155.t1 MTR_8g036225 28.155 309 192 8 65 355 27 323 3.30e-30 118
MS.gene049155.t1 MTR_2g033970 27.492 331 205 7 46 354 29 346 1.05e-29 117
MS.gene049155.t1 MTR_2g073390 28.315 279 164 7 71 326 71 336 5.16e-29 115
MS.gene049155.t1 MTR_0009s0350 28.520 277 162 7 71 324 71 334 1.40e-28 114
MS.gene049155.t1 MTR_0009s0340 28.520 277 162 7 71 324 71 334 1.40e-28 114
MS.gene049155.t1 MTR_2g436600 26.807 332 197 10 46 354 28 336 2.37e-25 105
MS.gene049155.t1 MTR_6g025590 30.481 187 99 5 53 214 36 216 1.43e-20 89.7
MS.gene049155.t1 MTR_0408s0030 40.404 99 46 3 231 327 36 123 7.74e-16 74.3
MS.gene049155.t1 MTR_4g130790 28.834 163 95 4 102 243 55 217 2.55e-13 69.7
MS.gene049155.t1 MTR_2g436070 44.681 94 41 4 38 128 221 306 2.47e-12 67.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene049155.t1 AT1G23200 52.658 395 142 7 4 365 172 554 6.09e-139 406
MS.gene049155.t1 AT2G45220 58.235 340 113 6 43 365 184 511 1.18e-138 404
MS.gene049155.t1 AT3G60730 55.937 320 122 2 65 365 200 519 5.89e-131 385
MS.gene049155.t1 AT5G53370 48.691 382 172 6 2 365 210 585 4.33e-125 372
MS.gene049155.t1 AT5G53370 48.691 382 172 6 2 365 246 621 8.77e-125 372
MS.gene049155.t1 AT3G49220 48.837 387 166 8 2 365 219 596 9.62e-124 369
MS.gene049155.t1 AT3G49220 48.837 387 166 8 2 365 264 641 3.35e-123 369
MS.gene049155.t1 AT1G11580 51.304 345 149 3 38 365 215 557 6.60e-123 365
MS.gene049155.t1 AT1G11580 51.304 345 149 3 38 365 236 578 1.35e-122 365
MS.gene049155.t1 AT1G53830 48.187 386 166 5 8 365 208 587 1.13e-121 363
MS.gene049155.t1 AT3G14310 52.161 347 143 3 36 365 252 592 1.18e-121 363
MS.gene049155.t1 AT5G51490 45.953 383 170 5 3 365 171 536 1.46e-120 359
MS.gene049155.t1 AT3G59010 50.263 380 151 8 4 365 169 528 1.21e-119 356
MS.gene049155.t1 AT5G51500 46.475 383 170 5 3 365 173 540 3.30e-119 355
MS.gene049155.t1 AT4G02330 52.976 336 137 5 50 365 237 571 3.32e-118 354
MS.gene049155.t1 AT3G47400 46.457 381 173 4 4 365 226 594 7.70e-118 354
MS.gene049155.t1 AT4G02320 50.888 338 145 4 45 365 185 518 1.01e-117 351
MS.gene049155.t1 AT3G43270 51.622 339 142 3 44 365 192 525 5.50e-117 349
MS.gene049155.t1 AT3G05620 46.982 381 162 6 2 365 184 541 6.61e-116 347
MS.gene049155.t1 AT4G02300 46.791 374 168 5 9 365 173 532 6.68e-116 347
MS.gene049155.t1 AT5G27870 48.406 345 156 5 38 365 223 562 8.54e-116 353
MS.gene049155.t1 AT2G26450 46.809 376 170 7 8 365 248 611 9.05e-115 347
MS.gene049155.t1 AT1G02810 52.516 318 128 6 69 365 262 577 3.68e-113 341
MS.gene049155.t1 AT4G33220 46.313 339 159 3 44 365 70 402 5.94e-112 332
MS.gene049155.t1 AT2G26440 44.961 387 184 6 1 365 168 547 6.20e-112 337
MS.gene049155.t1 AT2G43050 45.669 381 163 5 4 365 161 516 7.85e-112 336
MS.gene049155.t1 AT3G05610 46.243 346 164 5 38 365 224 565 7.39e-111 338
MS.gene049155.t1 AT4G33220 46.313 339 159 3 44 365 191 523 8.04e-111 333
MS.gene049155.t1 AT4G00190 52.201 318 131 4 66 365 160 474 1.85e-110 331
MS.gene049155.t1 AT5G49180 45.358 377 178 7 7 361 196 566 2.58e-110 334
MS.gene049155.t1 AT3G10710 46.194 381 171 6 2 365 198 561 1.57e-108 329
MS.gene049155.t1 AT2G47550 50.151 331 144 5 54 365 230 558 2.96e-108 328
MS.gene049155.t1 AT5G04960 44.474 380 182 6 2 363 194 562 2.57e-107 326
MS.gene049155.t1 AT5G20860 44.271 384 169 9 2 365 180 538 5.71e-107 324
MS.gene049155.t1 AT3G06830 43.684 380 188 8 7 363 190 566 9.40e-107 325
MS.gene049155.t1 AT4G33230 44.737 380 181 8 8 365 234 606 6.17e-106 323
MS.gene049155.t1 AT3G10720 47.321 336 155 4 51 365 281 615 3.35e-104 319
MS.gene049155.t1 AT5G04970 49.045 314 140 3 71 365 308 620 1.59e-101 313
MS.gene049155.t1 AT4G15980 45.217 345 166 5 39 363 359 700 1.06e-97 305
MS.gene049155.t1 AT3G10720 52.692 260 105 2 123 365 1 259 1.41e-97 291
MS.gene049155.t1 AT4G15980 45.217 345 166 5 39 363 369 710 2.25e-97 304
MS.gene049155.t1 AT3G27980 45.104 337 160 4 46 365 169 497 2.24e-96 296
MS.gene049155.t1 AT4G03930 45.104 337 164 4 46 365 192 524 2.63e-96 296
MS.gene049155.t1 AT1G11590 44.807 337 165 4 46 365 192 524 8.86e-96 295
MS.gene049155.t1 AT1G53840 41.514 383 180 10 2 359 218 581 3.36e-93 290
MS.gene049155.t1 AT3G14300 42.408 382 181 9 2 360 601 966 1.12e-92 298
MS.gene049155.t1 AT5G20860 43.064 346 158 7 2 344 180 489 5.47e-89 277
MS.gene049155.t1 AT5G09760 39.086 394 195 7 4 358 164 551 3.09e-86 271
MS.gene049155.t1 AT5G09760 39.086 394 195 7 4 358 190 577 7.54e-86 271
MS.gene049155.t1 AT2G47030 38.847 399 202 7 2 365 197 588 1.42e-81 260
MS.gene049155.t1 AT2G47040 40.053 377 187 8 21 365 226 595 2.33e-80 257
MS.gene049155.t1 AT3G62170 37.772 413 204 8 2 365 180 588 5.39e-80 256
MS.gene049155.t1 AT5G64640 41.390 331 154 7 58 355 276 599 7.99e-80 256
MS.gene049155.t1 AT1G11370 46.124 258 121 2 57 297 32 288 1.37e-78 243
MS.gene049155.t1 AT5G19730 34.385 317 163 8 67 354 81 381 1.19e-47 166
MS.gene049155.t1 AT3G29090 32.746 284 152 4 71 327 7 278 1.76e-45 158
MS.gene049155.t1 AT1G05310 31.611 329 179 8 61 359 81 393 1.64e-41 150
MS.gene049155.t1 AT2G36700 29.934 304 177 6 73 354 44 333 5.15e-40 144
MS.gene049155.t1 AT2G36710 30.844 308 176 6 71 354 91 385 1.24e-39 145
MS.gene049155.t1 AT2G21610 30.872 298 176 8 71 354 51 332 1.48e-38 141
MS.gene049155.t1 AT2G21610 30.537 298 177 8 71 354 56 337 1.90e-38 141
MS.gene049155.t1 AT3G24130 30.851 282 161 6 70 327 33 304 4.74e-37 137
MS.gene049155.t1 AT1G44980 39.614 207 106 3 29 218 37 241 1.90e-36 132
MS.gene049155.t1 AT5G18990 31.419 296 162 7 56 327 21 299 3.80e-36 134
MS.gene049155.t1 AT3G17060 28.013 307 182 7 71 354 46 336 3.37e-35 132
MS.gene049155.t1 AT5G47500 28.487 337 194 8 50 355 38 358 7.73e-34 129
MS.gene049155.t1 AT5G07430 28.618 304 182 6 71 354 67 355 8.67e-34 128
MS.gene049155.t1 AT5G26810 28.616 318 177 9 71 355 34 334 5.12e-32 123
MS.gene049155.t1 AT2G19150 28.221 326 190 9 62 361 32 339 1.56e-31 122
MS.gene049155.t1 AT5G61680 27.684 354 209 12 1 327 1 334 2.67e-31 122
MS.gene049155.t1 AT5G55590 31.529 314 168 7 71 354 82 378 7.28e-31 121
MS.gene049155.t1 AT5G55590 31.518 257 134 5 71 298 82 325 1.57e-29 116
MS.gene049155.t1 AT5G07420 27.597 308 180 10 71 354 67 355 6.59e-29 115
MS.gene049155.t1 AT2G47280 27.362 307 188 7 71 355 35 328 1.96e-27 110
MS.gene049155.t1 AT2G19150 29.119 261 148 7 62 298 32 279 1.31e-26 107
MS.gene049155.t1 AT1G69940 24.916 297 187 7 79 354 74 355 2.47e-25 105
MS.gene049155.t1 AT5G07410 25.185 270 169 6 79 327 74 331 2.45e-24 102
MS.gene049155.t1 AT3G49220 37.143 140 73 7 2 135 264 394 2.27e-15 77.4

Find 97 sgRNAs with CRISPR-Local

Find 151 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTGCTGATTCTTGGATTTC+AGG 0.130565 4.4:-2366859 MS.gene049155:CDS
GTGACAAATTTAATGATATT+TGG 0.156463 4.4:-2369015 MS.gene049155:CDS
GCATTGAGTACACTTTATTA+TGG 0.267204 4.4:-2366997 MS.gene049155:CDS
CTGCTGATTCTTGGATTTCA+GGG 0.308239 4.4:-2366858 MS.gene049155:CDS
AATCATTTGCTGCGGTTATA+CGG 0.315468 4.4:+2367154 None:intergenic
AATTTCCATACTGGCTTTCA+AGG 0.355470 4.4:-2369239 MS.gene049155:CDS
TCATCAAGTACTAAACAAAA+TGG 0.356786 4.4:-2369285 MS.gene049155:CDS
TCTGACCTTGAAAGCCAGTA+TGG 0.366153 4.4:+2369234 None:intergenic
GGAACTATTGATTTCATCTT+CGG 0.369134 4.4:-2367306 MS.gene049155:CDS
TATCAGATAAATTTCCATAC+TGG 0.372948 4.4:-2369248 MS.gene049155:CDS
TTTGATAAATTCACAAGGTT+GGG 0.373566 4.4:-2367040 MS.gene049155:CDS
CTTCAGGCAACACCGGGGTC+AGG 0.382501 4.4:-2369201 MS.gene049155:CDS
AATTCAGTTAAAACATATCT+TGG 0.398697 4.4:-2367117 MS.gene049155:CDS
TGTTGCAGTCGCGGTAGAAT+TGG 0.411073 4.4:+2367334 None:intergenic
GTAATGAAAAGTAATCTTGA+TGG 0.411444 4.4:-2367063 MS.gene049155:CDS
TGTTCTTCCTTGTGCTGTTA+CGG 0.414972 4.4:+2367215 None:intergenic
ATACTGGTGGAAGAGTTAAT+TGG 0.417090 4.4:-2366945 MS.gene049155:CDS
GTTTGATAAATTCACAAGGT+TGG 0.422089 4.4:-2367041 MS.gene049155:CDS
TGAAGTTAGAGTATTGATAA+TGG 0.424970 4.4:+2369329 None:intergenic
GCGGTTGGCGTAAGCATATA+AGG 0.426322 4.4:+2367356 None:intergenic
AATAATAACTGCAGCTGTCA+TGG 0.427766 4.4:-2367511 MS.gene049155:intron
GCTGCTAAGCTTAGTGGAAA+AGG 0.429873 4.4:-2369099 MS.gene049155:CDS
CGCAGCAAATGATTTGAAAC+CGG 0.431620 4.4:-2367145 MS.gene049155:CDS
GTTGGTGGTGGTGCTAATAC+TGG 0.437055 4.4:-2366961 MS.gene049155:CDS
CAAGCAGTAGCTCTCCGTTC+CGG 0.442034 4.4:-2367429 MS.gene049155:CDS
GGTGTCTTGGTAGCCTTTGA+AGG 0.442263 4.4:+2367377 None:intergenic
GTCAGATAGAAAGCTTCTTC+AGG 0.443922 4.4:-2369217 MS.gene049155:CDS
GTGTTCTGTTGGTTGCTCAT+TGG 0.453378 4.4:+2367237 None:intergenic
GCAACACCGGGGTCAGGGAC+AGG 0.454024 4.4:-2369195 MS.gene049155:CDS
AAGAGAATGTTGATATCAAA+AGG 0.455565 4.4:-2369041 MS.gene049155:CDS
ACAAGGTTGGGCTCCATGGA+TGG 0.456078 4.4:-2367028 MS.gene049155:CDS
CAAGGTTGGGCTCCATGGAT+GGG 0.470284 4.4:-2367027 MS.gene049155:CDS
ATTCACAAGGTTGGGCTCCA+TGG 0.471108 4.4:-2367032 MS.gene049155:CDS
GGACATGACCTTTGAGAATA+CGG 0.477411 4.4:-2367469 MS.gene049155:CDS
AATGATATTTGGAGATGGAA+TGG 0.477734 4.4:-2369004 MS.gene049155:CDS
GATGCAGCTGCTAAGCTTAG+TGG 0.483722 4.4:-2369105 MS.gene049155:CDS
GTTGTTATTCATCTGAAAGC+AGG 0.486478 4.4:-2369072 MS.gene049155:CDS
TTCTACCGTTGCGCCTTCAA+AGG 0.497358 4.4:-2367390 MS.gene049155:CDS
CTGCTAAGCTTAGTGGAAAA+GGG 0.504769 4.4:-2369098 MS.gene049155:CDS
AGTGGTGTGCCGTTTGATGC+AGG 0.508356 4.4:-2366835 MS.gene049155:CDS
AAGCTTCTTCAGGCAACACC+GGG 0.510144 4.4:-2369207 MS.gene049155:CDS
TGCAGTCGCGGTAGAATTGG+CGG 0.511251 4.4:+2367337 None:intergenic
GTTCTTGAATATTTCTGCCA+TGG 0.518439 4.4:+2367090 None:intergenic
GGTGGAAGAGTTAATTGGCC+TGG 0.520232 4.4:-2366940 MS.gene049155:CDS
TAAGACAATATCTGAGGGTG+TGG 0.520252 4.4:-2369127 MS.gene049155:CDS
CTTGGTCCTGTCCCTGACCC+CGG 0.525603 4.4:+2369189 None:intergenic
ATTCACAAACCTGCATCAAA+CGG 0.526344 4.4:+2366826 None:intergenic
TTTAGTGAAGTTGCTTAACA+TGG 0.527598 4.4:+2369371 None:intergenic
TACCGCGACTGCAACATCTA+CGG 0.528232 4.4:-2367327 MS.gene049155:CDS
ACTGCAGCTGTCATGGGAGA+TGG 0.533273 4.4:-2367504 MS.gene049155:intron
CGTAAGCATATAAGGTGTCT+TGG 0.533953 4.4:+2367364 None:intergenic
GGTTGGGCTCCATGGATGGG+TGG 0.536463 4.4:-2367024 MS.gene049155:CDS
TGTTATTACTAATCCTTCTG+AGG 0.537907 4.4:-2366911 MS.gene049155:CDS
GTGCTGTTACGGTGTTCTGT+TGG 0.539536 4.4:+2367226 None:intergenic
AATTTAATGATATTTGGAGA+TGG 0.540497 4.4:-2369009 MS.gene049155:CDS
ATAATAACTGCAGCTGTCAT+GGG 0.542595 4.4:-2367510 MS.gene049155:intron
TATGGTGAATATATGAATGT+TGG 0.547151 4.4:-2366979 MS.gene049155:CDS
AAAGCTTCTTCAGGCAACAC+CGG 0.552192 4.4:-2369208 MS.gene049155:CDS
GAAAATTTAACAGCCTCAGA+AGG 0.553132 4.4:+2366898 None:intergenic
GTGGTTGCACAAGATGGAAG+TGG 0.556036 4.4:-2369156 MS.gene049155:CDS
CAGAACACCGTAACAGCACA+AGG 0.556039 4.4:-2367222 MS.gene049155:CDS
GATTCTTGGATTTCAGGGAG+TGG 0.557003 4.4:-2366853 MS.gene049155:CDS
GGGAGATGGTTTCATAGCTA+AGG 0.562094 4.4:-2367490 MS.gene049155:CDS
TTGTTTAGTACTTGATGATG+TGG 0.565122 4.4:+2369290 None:intergenic
CAGAGTGATCGGCGCCGGAA+CGG 0.565710 4.4:+2367415 None:intergenic
GAAAACAGAGTGATCGGCGC+CGG 0.568686 4.4:+2367410 None:intergenic
GGGTCCTGCCGTATTCTCAA+AGG 0.569689 4.4:+2367461 None:intergenic
GTCGCGGTAGAATTGGCGGT+TGG 0.570719 4.4:+2367341 None:intergenic
ATGGATTCTACTATTGTCAC+GGG 0.574508 4.4:-2368985 MS.gene049155:intron
CGGAACGGAGAGCTACTGCT+TGG 0.579824 4.4:+2367430 None:intergenic
AATGCAAAACCACCCATCCA+TGG 0.580980 4.4:+2367015 None:intergenic
TTCCGTAGATGTTGCAGTCG+CGG 0.586032 4.4:+2367325 None:intergenic
TCAAGTACTAAACAAAATGG+AGG 0.588650 4.4:-2369282 MS.gene049155:CDS
AATGGATTCTACTATTGTCA+CGG 0.588947 4.4:-2368986 MS.gene049155:CDS
GGTGAATATATGAATGTTGG+TGG 0.591996 4.4:-2366976 MS.gene049155:CDS
GATATCGTGGTTGCACAAGA+TGG 0.592172 4.4:-2369162 MS.gene049155:CDS
ATGACCTTTGAGAATACGGC+AGG 0.599978 4.4:-2367465 MS.gene049155:CDS
TTCAGGCAACACCGGGGTCA+GGG 0.601142 4.4:-2369200 MS.gene049155:CDS
ACGGTAGAAAACAGAGTGAT+CGG 0.604542 4.4:+2367404 None:intergenic
GAACTATAAGACAATATCTG+AGG 0.605352 4.4:-2369133 MS.gene049155:CDS
AACTATAAGACAATATCTGA+GGG 0.612206 4.4:-2369132 MS.gene049155:CDS
GGTAGCCTTTGAAGGCGCAA+CGG 0.619934 4.4:+2367385 None:intergenic
CTAAACAAAATGGAGGGAGA+AGG 0.620123 4.4:-2369275 MS.gene049155:CDS
GAATATATGAATGTTGGTGG+TGG 0.621736 4.4:-2366973 MS.gene049155:CDS
CGGTTTCAAATCATTTGCTG+CGG 0.623680 4.4:+2367146 None:intergenic
CAAGTACTAAACAAAATGGA+GGG 0.628274 4.4:-2369281 MS.gene049155:CDS
AGGACCAAGTGCTGATATCG+TGG 0.631260 4.4:-2369175 MS.gene049155:CDS
GATGATGTGGATGAAGATGA+TGG 0.634150 4.4:+2369303 None:intergenic
ACAGATCCAAATGAAAACAC+AGG 0.641536 4.4:-2367195 MS.gene049155:CDS
TGGTTGCACAAGATGGAAGT+GGG 0.642324 4.4:-2369155 MS.gene049155:CDS
AAACATATCTTGGTAGACCA+TGG 0.646826 4.4:-2367107 MS.gene049155:CDS
GCAACCACGATATCAGCACT+TGG 0.658862 4.4:+2369171 None:intergenic
GGTGGTGGTGCTAATACTGG+TGG 0.661832 4.4:-2366958 MS.gene049155:CDS
ATGGCAGAAATATTCAAGAA+CGG 0.671890 4.4:-2367088 MS.gene049155:CDS
TTAGTAATAACATGAAAACC+AGG 0.674041 4.4:+2366922 None:intergenic
GATGGTTTGATAAATTCACA+AGG 0.696704 4.4:-2367045 MS.gene049155:CDS
AGCTTCTTCAGGCAACACCG+GGG 0.762405 4.4:-2369206 MS.gene049155:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AACACTATAAATATTCATTT+TGG - chr4.4:2367966-2367985 MS.gene049155:intron 15.0%
!!! TTAAAATTAGTCATCTTTTT+AGG - chr4.4:2367528-2367547 MS.gene049155:intron 15.0%
!! AATTCAGTTAAAACATATCT+TGG - chr4.4:2369080-2369099 MS.gene049155:CDS 20.0%
!! AATTTAATGATATTTGGAGA+TGG - chr4.4:2367188-2367207 MS.gene049155:CDS 20.0%
!! GAATAGGATAATTAACAAAT+AGG - chr4.4:2368133-2368152 MS.gene049155:intron 20.0%
!! GGAAAAAACGAAAAATTTAA+AGG - chr4.4:2367685-2367704 MS.gene049155:intron 20.0%
!! GTGACAAATTTAATGATATT+TGG - chr4.4:2367182-2367201 MS.gene049155:CDS 20.0%
!! TTATTTCATAGTTAGAACTT+TGG + chr4.4:2368667-2368686 None:intergenic 20.0%
!! TTGAAACTTAAAAATCACTT+TGG - chr4.4:2367664-2367683 MS.gene049155:intron 20.0%
!!! AAAAGATGACTAATTTTAAG+TGG + chr4.4:2367527-2367546 None:intergenic 20.0%
!!! AAAGATGACTAATTTTAAGT+GGG + chr4.4:2367526-2367545 None:intergenic 20.0%
!!! ATTTTCTGTTGGTAATTTTT+TGG - chr4.4:2369316-2369335 MS.gene049155:CDS 20.0%
!!! TTTTTTTTTGAATATGCGTT+TGG + chr4.4:2368284-2368303 None:intergenic 20.0%
! AACTATAAGACAATATCTGA+GGG - chr4.4:2367065-2367084 MS.gene049155:CDS 25.0%
! AAGAGAATGTTGATATCAAA+AGG - chr4.4:2367156-2367175 MS.gene049155:CDS 25.0%
! AGAAAAGTTATCGTTACATA+TGG + chr4.4:2368518-2368537 None:intergenic 25.0%
! AGATTATTGTGTGAGAATAT+AGG - chr4.4:2367319-2367338 MS.gene049155:CDS 25.0%
! AGGAAAAACGAAAAACTTAA+AGG + chr4.4:2367363-2367382 None:intergenic 25.0%
! ATATTATTGCTGTGATTACA+CGG + chr4.4:2368396-2368415 None:intergenic 25.0%
! ATTACTTACTTTCTCACAAA+AGG - chr4.4:2368211-2368230 MS.gene049155:intron 25.0%
! GAAACGATTCAAAAACTAAA+AGG - chr4.4:2367626-2367645 MS.gene049155:intron 25.0%
! GAAACGATTCAAAAACTAAA+AGG + chr4.4:2367645-2367626 None:intergenic 25.0%
! GTAATGAAAAGTAATCTTGA+TGG - chr4.4:2369134-2369153 MS.gene049155:CDS 25.0%
! TATCAGATAAATTTCCATAC+TGG - chr4.4:2366949-2366968 MS.gene049155:CDS 25.0%
! TATGGTGAATATATGAATGT+TGG - chr4.4:2369218-2369237 MS.gene049155:CDS 25.0%
! TCATCAAGTACTAAACAAAA+TGG - chr4.4:2366912-2366931 MS.gene049155:CDS 25.0%
! TTAGTAATAACATGAAAACC+AGG + chr4.4:2369278-2369297 None:intergenic 25.0%
! TTTGATAAATTCACAAGGTT+GGG - chr4.4:2369157-2369176 MS.gene049155:CDS 25.0%
!! AAAAACTAAAAGGACTTGTT+TGG - chr4.4:2367636-2367655 MS.gene049155:intron 25.0%
!! AAAACTAAAAGGACTTGTTT+GGG - chr4.4:2367637-2367656 MS.gene049155:intron 25.0%
!!! ATTAGTCATCTTTTTAGGTA+TGG - chr4.4:2367533-2367552 MS.gene049155:intron 25.0%
!!! TGAAGTTAGAGTATTGATAA+TGG + chr4.4:2366871-2366890 None:intergenic 25.0%
!!! TGAGACTTTTGAAACTTAAA+AGG + chr4.4:2367394-2367413 None:intergenic 25.0%
!!! TTTCAAACAAGTCATTTTAG+AGG + chr4.4:2367610-2367629 None:intergenic 25.0%
AAACTTAAAAGGACCACTTT+AGG + chr4.4:2367383-2367402 None:intergenic 30.0%
AATGATATTTGGAGATGGAA+TGG - chr4.4:2367193-2367212 MS.gene049155:CDS 30.0%
ATGGCAGAAATATTCAAGAA+CGG - chr4.4:2369109-2369128 MS.gene049155:CDS 30.0%
CAAGTACTAAACAAAATGGA+GGG - chr4.4:2366916-2366935 MS.gene049155:CDS 30.0%
GAACTATAAGACAATATCTG+AGG - chr4.4:2367064-2367083 MS.gene049155:CDS 30.0%
GATGGTTTGATAAATTCACA+AGG - chr4.4:2369152-2369171 MS.gene049155:CDS 30.0%
GCATTGAGTACACTTTATTA+TGG - chr4.4:2369200-2369219 MS.gene049155:CDS 30.0%
GGTAATCAAAATGCTATAGA+TGG - chr4.4:2367233-2367252 MS.gene049155:CDS 30.0%
GTTTGATAAATTCACAAGGT+TGG - chr4.4:2369156-2369175 MS.gene049155:CDS 30.0%
TATAGGTCAAATGCATCTAA+AGG - chr4.4:2367336-2367355 MS.gene049155:CDS 30.0%
TCAAGTACTAAACAAAATGG+AGG - chr4.4:2366915-2366934 MS.gene049155:CDS 30.0%
TCTCGATCAAATGAATCTAA+AGG + chr4.4:2367712-2367731 None:intergenic 30.0%
TGTACAAATTGTGTTACGTA+CGG - chr4.4:2368031-2368050 MS.gene049155:intron 30.0%
TGTTATTACTAATCCTTCTG+AGG - chr4.4:2369286-2369305 MS.gene049155:CDS 30.0%
! AATGGATTCTACTATTGTCA+CGG - chr4.4:2367211-2367230 MS.gene049155:CDS 30.0%
! ACAATTCCTGTGTTTTCATT+TGG + chr4.4:2369011-2369030 None:intergenic 30.0%
!! CAAGTCATTTTAGAGGATAA+TGG + chr4.4:2367603-2367622 None:intergenic 30.0%
!! GATTGTTTGCTATTATGCAT+GGG - chr4.4:2367884-2367903 MS.gene049155:intron 30.0%
!! GGAACTATTGATTTCATCTT+CGG - chr4.4:2368891-2368910 MS.gene049155:intron 30.0%
!! GTTTTTCGTTTTTCCTAAAG+TGG - chr4.4:2367367-2367386 MS.gene049155:CDS 30.0%
!! TCGTTTTGCTATCAAAGAAT+AGG - chr4.4:2368117-2368136 MS.gene049155:intron 30.0%
!! TGATTGTTTGCTATTATGCA+TGG - chr4.4:2367883-2367902 MS.gene049155:intron 30.0%
!! TTGTTTAGTACTTGATGATG+TGG + chr4.4:2366910-2366929 None:intergenic 30.0%
!!! ATCTTTTTAGGTATGGCAAA+TGG - chr4.4:2367540-2367559 MS.gene049155:intron 30.0%
!!! GTTTTAACTGAATTCTGAAC+CGG + chr4.4:2369074-2369093 None:intergenic 30.0%
AAACATATCTTGGTAGACCA+TGG - chr4.4:2369090-2369109 MS.gene049155:CDS 35.0%
AATAATAACTGCAGCTGTCA+TGG - chr4.4:2368686-2368705 MS.gene049155:intron 35.0%
ACAGATCCAAATGAAAACAC+AGG - chr4.4:2369002-2369021 MS.gene049155:CDS 35.0%
ATAATAACTGCAGCTGTCAT+GGG - chr4.4:2368687-2368706 MS.gene049155:intron 35.0%
ATACTGGTGGAAGAGTTAAT+TGG - chr4.4:2369252-2369271 MS.gene049155:CDS 35.0%
ATGGATTCTACTATTGTCAC+GGG - chr4.4:2367212-2367231 MS.gene049155:CDS 35.0%
CCAACTATGCTATCTACAAT+AGG + chr4.4:2367455-2367474 None:intergenic 35.0%
CCTATTGTAGATAGCATAGT+TGG - chr4.4:2367452-2367471 MS.gene049155:CDS 35.0%
GAAAATTTAACAGCCTCAGA+AGG + chr4.4:2369302-2369321 None:intergenic 35.0%
GGTGAATATATGAATGTTGG+TGG - chr4.4:2369221-2369240 MS.gene049155:CDS 35.0%
TGCATGGGATAAATCATATG+TGG - chr4.4:2367899-2367918 MS.gene049155:intron 35.0%
! AATCATTTGCTGCGGTTATA+CGG + chr4.4:2369046-2369065 None:intergenic 35.0%
! ACATTTCGTTCAGCAACTTT+TGG - chr4.4:2367263-2367282 MS.gene049155:CDS 35.0%
! GAATATATGAATGTTGGTGG+TGG - chr4.4:2369224-2369243 MS.gene049155:CDS 35.0%
! GAGGCTGTTAAATTTTCTGT+TGG - chr4.4:2369305-2369324 MS.gene049155:CDS 35.0%
! GTTCTTGAATATTTCTGCCA+TGG + chr4.4:2369110-2369129 None:intergenic 35.0%
! GTTGTTATTCATCTGAAAGC+AGG - chr4.4:2367125-2367144 MS.gene049155:CDS 35.0%
!! AATATTCATTTTGGCCCCAT+TGG - chr4.4:2367975-2367994 MS.gene049155:intron 35.0%
!! AATTTCCATACTGGCTTTCA+AGG - chr4.4:2366958-2366977 MS.gene049155:CDS 35.0%
!! ATATTCATTTTGGCCCCATT+GGG - chr4.4:2367976-2367995 MS.gene049155:intron 35.0%
!!! ATTTTTTGGCTGCTGATTCT+TGG - chr4.4:2369330-2369349 MS.gene049155:CDS 35.0%
!!! TTTTTAGGTATGGCAAATGG+TGG - chr4.4:2367543-2367562 MS.gene049155:intron 35.0%
ACGGTAGAAAACAGAGTGAT+CGG + chr4.4:2368796-2368815 None:intergenic 40.0%
CTAAACAAAATGGAGGGAGA+AGG - chr4.4:2366922-2366941 MS.gene049155:CDS 40.0%
CTCATCTTTGGTACCAAATC+TGG - chr4.4:2367491-2367510 MS.gene049155:CDS 40.0%
CTGCTAAGCTTAGTGGAAAA+GGG - chr4.4:2367099-2367118 MS.gene049155:CDS 40.0%
GATGATGTGGATGAAGATGA+TGG + chr4.4:2366897-2366916 None:intergenic 40.0%
GTCAGATAGAAAGCTTCTTC+AGG - chr4.4:2366980-2366999 MS.gene049155:CDS 40.0%
GTCTCTATCCTAATCCCAAT+GGG + chr4.4:2367993-2368012 None:intergenic 40.0%
TAAGACAATATCTGAGGGTG+TGG - chr4.4:2367070-2367089 MS.gene049155:CDS 40.0%
TCTCTATCCTAATCCCAATG+GGG + chr4.4:2367992-2368011 None:intergenic 40.0%
TGCTTCCTTGAACTCATCTT+TGG - chr4.4:2367479-2367498 MS.gene049155:CDS 40.0%
TGGTACCAAAGATGAGTTCA+AGG + chr4.4:2367487-2367506 None:intergenic 40.0%
TGTCTCTATCCTAATCCCAA+TGG + chr4.4:2367994-2368013 None:intergenic 40.0%
! CGCAGCAAATGATTTGAAAC+CGG - chr4.4:2369052-2369071 MS.gene049155:CDS 40.0%
! CGGTTTCAAATCATTTGCTG+CGG + chr4.4:2369054-2369073 None:intergenic 40.0%
! CGTAAGCATATAAGGTGTCT+TGG + chr4.4:2368836-2368855 None:intergenic 40.0%
! GGACATGACCTTTGAGAATA+CGG - chr4.4:2368728-2368747 MS.gene049155:intron 40.0%
! TGTTCTTCCTTGTGCTGTTA+CGG + chr4.4:2368985-2369004 None:intergenic 40.0%
!! CGAAGATGTTGCAGTTTTGA+AGG + chr4.4:2368932-2368951 None:intergenic 40.0%
!! CTGCTGATTCTTGGATTTCA+GGG - chr4.4:2369339-2369358 MS.gene049155:CDS 40.0%
!!! AGCTACTGCTTGGTGTTTTT+GGG + chr4.4:2368760-2368779 None:intergenic 40.0%
AAAGCTTCTTCAGGCAACAC+CGG - chr4.4:2366989-2367008 MS.gene049155:CDS 45.0%
AATGCAAAACCACCCATCCA+TGG + chr4.4:2369185-2369204 None:intergenic 45.0%
GATATCGTGGTTGCACAAGA+TGG - chr4.4:2367035-2367054 MS.gene049155:CDS 45.0%
GATTCTTGGATTTCAGGGAG+TGG - chr4.4:2369344-2369363 MS.gene049155:CDS 45.0%
GCTGCTAAGCTTAGTGGAAA+AGG - chr4.4:2367098-2367117 MS.gene049155:CDS 45.0%
GGGAGATGGTTTCATAGCTA+AGG - chr4.4:2368707-2368726 MS.gene049155:intron 45.0%
TCTGACCTTGAAAGCCAGTA+TGG + chr4.4:2366966-2366985 None:intergenic 45.0%
TGGGTGTTAGAAGCCAGATT+TGG + chr4.4:2367507-2367526 None:intergenic 45.0%
TGGTTGCACAAGATGGAAGT+GGG - chr4.4:2367042-2367061 MS.gene049155:CDS 45.0%
! ATGACCTTTGAGAATACGGC+AGG - chr4.4:2368732-2368751 MS.gene049155:intron 45.0%
! GTGTTCTGTTGGTTGCTCAT+TGG + chr4.4:2368963-2368982 None:intergenic 45.0%
!! ATTTTGGCCCCATTGGGATT+AGG - chr4.4:2367982-2368001 MS.gene049155:intron 45.0%
!! GCTGCTGATTCTTGGATTTC+AGG - chr4.4:2369338-2369357 MS.gene049155:CDS 45.0%
!!! GAGCTACTGCTTGGTGTTTT+TGG + chr4.4:2368761-2368780 None:intergenic 45.0%
!!! GCTACTGCTTGGTGTTTTTG+GGG + chr4.4:2368759-2368778 None:intergenic 45.0%
AAGCTTCTTCAGGCAACACC+GGG - chr4.4:2366990-2367009 MS.gene049155:CDS 50.0%
ATTCACAAGGTTGGGCTCCA+TGG - chr4.4:2369165-2369184 MS.gene049155:CDS 50.0%
CAGAACACCGTAACAGCACA+AGG - chr4.4:2368975-2368994 MS.gene049155:intron 50.0%
GATGCAGCTGCTAAGCTTAG+TGG - chr4.4:2367092-2367111 MS.gene049155:CDS 50.0%
GCAACCACGATATCAGCACT+TGG + chr4.4:2367029-2367048 None:intergenic 50.0%
GCGGTTGGCGTAAGCATATA+AGG + chr4.4:2368844-2368863 None:intergenic 50.0%
GGTGGAAGAGTTAATTGGCC+TGG - chr4.4:2369257-2369276 MS.gene049155:CDS 50.0%
GTGGTTGCACAAGATGGAAG+TGG - chr4.4:2367041-2367060 MS.gene049155:CDS 50.0%
TACCGCGACTGCAACATCTA+CGG - chr4.4:2368870-2368889 MS.gene049155:intron 50.0%
TGTTGCAGTCGCGGTAGAAT+TGG + chr4.4:2368866-2368885 None:intergenic 50.0%
TTCCGTAGATGTTGCAGTCG+CGG + chr4.4:2368875-2368894 None:intergenic 50.0%
TTCTACCGTTGCGCCTTCAA+AGG - chr4.4:2368807-2368826 MS.gene049155:intron 50.0%
! GGTGTCTTGGTAGCCTTTGA+AGG + chr4.4:2368823-2368842 None:intergenic 50.0%
! GTGCTGTTACGGTGTTCTGT+TGG + chr4.4:2368974-2368993 None:intergenic 50.0%
!! AGGACCAAGTGCTGATATCG+TGG - chr4.4:2367022-2367041 MS.gene049155:CDS 50.0%
!! GTTGGTGGTGGTGCTAATAC+TGG - chr4.4:2369236-2369255 MS.gene049155:CDS 50.0%
ACAAGGTTGGGCTCCATGGA+TGG - chr4.4:2369169-2369188 MS.gene049155:CDS 55.0%
ACTGCAGCTGTCATGGGAGA+TGG - chr4.4:2368693-2368712 MS.gene049155:intron 55.0%
AGCTTCTTCAGGCAACACCG+GGG - chr4.4:2366991-2367010 MS.gene049155:CDS 55.0%
CAAGCAGTAGCTCTCCGTTC+CGG - chr4.4:2368768-2368787 MS.gene049155:intron 55.0%
CAAGGTTGGGCTCCATGGAT+GGG - chr4.4:2369170-2369189 MS.gene049155:CDS 55.0%
GAAAACAGAGTGATCGGCGC+CGG + chr4.4:2368790-2368809 None:intergenic 55.0%
GGGTCCTGCCGTATTCTCAA+AGG + chr4.4:2368739-2368758 None:intergenic 55.0%
TGCAGTCGCGGTAGAATTGG+CGG + chr4.4:2368863-2368882 None:intergenic 55.0%
! GGTAGCCTTTGAAGGCGCAA+CGG + chr4.4:2368815-2368834 None:intergenic 55.0%
! GGTGGTGGTGCTAATACTGG+TGG - chr4.4:2369239-2369258 MS.gene049155:CDS 55.0%
!! AGTGGTGTGCCGTTTGATGC+AGG - chr4.4:2369362-2369381 MS.gene049155:CDS 55.0%
CGGAACGGAGAGCTACTGCT+TGG + chr4.4:2368770-2368789 None:intergenic 60.0%
GTCGCGGTAGAATTGGCGGT+TGG + chr4.4:2368859-2368878 None:intergenic 60.0%
TTCAGGCAACACCGGGGTCA+GGG - chr4.4:2366997-2367016 MS.gene049155:CDS 60.0%
CTTCAGGCAACACCGGGGTC+AGG - chr4.4:2366996-2367015 MS.gene049155:CDS 65.0%
CTTGGTCCTGTCCCTGACCC+CGG + chr4.4:2367011-2367030 None:intergenic 65.0%
GGTTGGGCTCCATGGATGGG+TGG - chr4.4:2369173-2369192 MS.gene049155:CDS 65.0%
! CAGAGTGATCGGCGCCGGAA+CGG + chr4.4:2368785-2368804 None:intergenic 65.0%
GCAACACCGGGGTCAGGGAC+AGG - chr4.4:2367002-2367021 MS.gene049155:CDS 70.0%


Chromosome Type Strat End Strand Name
chr4.4 gene 2366828 2369391 2366828 ID=MS.gene049155
chr4.4 mRNA 2366828 2369391 2366828 ID=MS.gene049155.t1;Parent=MS.gene049155
chr4.4 exon 2368986 2369391 2368986 ID=MS.gene049155.t1.exon1;Parent=MS.gene049155.t1
chr4.4 CDS 2368986 2369391 2368986 ID=cds.MS.gene049155.t1;Parent=MS.gene049155.t1
chr4.4 exon 2366828 2367519 2366828 ID=MS.gene049155.t1.exon2;Parent=MS.gene049155.t1
chr4.4 CDS 2366828 2367519 2366828 ID=cds.MS.gene049155.t1;Parent=MS.gene049155.t1
Gene Sequence

>MS.gene049155

ATGTTAAGCAACTTCACTAAATTGCTTAGCAATTCTTTGTCCATTATCAATACTCTAACTTCATCGCCATCATCTTCATCCACATCATCAAGTACTAAACAAAATGGAGGGAGAAGGTTGTTATCAGATAAATTTCCATACTGGCTTTCAAGGTCAGATAGAAAGCTTCTTCAGGCAACACCGGGGTCAGGGACAGGACCAAGTGCTGATATCGTGGTTGCACAAGATGGAAGTGGGAACTATAAGACAATATCTGAGGGTGTGGATGCAGCTGCTAAGCTTAGTGGAAAAGGGAGAGTTGTTATTCATCTGAAAGCAGGTGTTTATAAAGAGAATGTTGATATCAAAAGGACAGTGACAAATTTAATGATATTTGGAGATGGAATGGATTCTACTATTGTCACGGGTAATCAAAATGCTATAGATGGTTCTACTACATTTCGTTCAGCAACTTTTGGTAAGTTCTTCAATAGTTAATTACTCATTCATATAGATTATTGTGTGAGAATATAGGTCAAATGCATCTAAAGGTCCTTTAAGTTTTTCGTTTTTCCTAAAGTGGTCCTTTTAAGTTTCAAAAGTCTCAAACAAGTCCTTTTAGTTTTTGAATCGTTTCAAACAAGTCCTATTGTAGATAGCATAGTTGGTAATTGCTTCCTTGAACTCATCTTTGGTACCAAATCTGGCTTCTAACACCCACTTAAAATTAGTCATCTTTTTAGGTATGGCAAATGGTGGATAATGCTCTTTGTTGCTATCATCTGAATCATCTCCATTATCCTCTAAAATGACTTGTTTGAAACGATTCAAAAACTAAAAGGACTTGTTTGGGACTTTTGAAACTTAAAAATCACTTTGGAAAAAACGAAAAATTTAAAGGACCTTTAGATTCATTTGATCGAGAATATATTATGATTGTTTGCTATTATGATGACTTGTTTGAAACGATTCAAAAACTAAAAGGACTTGTTTGGGACTTTTGAAACTTAAAAATCACTTTGGAAAAAACGAAAAATTTAAAGGACCTTTAGATTCATTTGATCGAGAATATATTATGATTGTTTGCTATTATGCATGGGATAAATCATATGTGGAATAGTAACAATGATAGTAATATAAAAACACTTTGAATTAACTGAACACTATAAATATTCATTTTGGCCCCATTGGGATTAGGATAGAGACATATGCAGTACTTACTTTTGTACAAATTGTGTTACGTACGGATCATACATCACTTCTTTTTTTGATAAGCATATAGCTCATATAATATTATATTGAGAAAATTGTCGTTTTGCTATCAAAGAATAGGATAATTAACAAATAGGATAATTAACAAAAAAGTACAAAGACGATAATATTTTCAAAATAATCTCTTTTTTAATTACTTACTTTCTCACAAAAGGTACTTTTTGTTATATTTTTTTTTTAGACTTGTTAATTAAAACATGTTCCAAACGCATATTCAAAAAAAAAAAAAATTAGCTAAGATATGATCATGTCAATTATAAAACTCTAATAACTTTAATTTTTCTTTCAAAAAAAAAAAACTCTAATTTCTATAACCGTGTAATCACAGCAATAATATATCAATATTACTCAACATACACTTTTTACAGCAGTCTCACAAAACAATGTATCTATCTATGATGTTCTTACTTTATATCATGCGAAGAAAATATCTTATCCATATGTAACGATAACTTTTCTAACAAAATACAATGCATTGTAATTGCAAATTTCTTTCACAGTAAATTAGAGTCGATCATTTGTATGACTTTAAAAGTAATTAATGATAAAAGTCTTACTAATTAACTAGATGTATATAAATTAAATCCAAAGTTCTAACTATGAAATAAATAATAACTGCAGCTGTCATGGGAGATGGTTTCATAGCTAAGGACATGACCTTTGAGAATACGGCAGGACCCCAAAAACACCAAGCAGTAGCTCTCCGTTCCGGCGCCGATCACTCTGTTTTCTACCGTTGCGCCTTCAAAGGCTACCAAGACACCTTATATGCTTACGCCAACCGCCAATTCTACCGCGACTGCAACATCTACGGAACTATTGATTTCATCTTCGGCAACGCAGTTACTGTCCTTCAAAACTGCAACATCTTCGTTAGAAAACCAATGAGCAACCAACAGAACACCGTAACAGCACAAGGAAGAACAGATCCAAATGAAAACACAGGAATTGTAATACATAACTGCCGTATAACCGCAGCAAATGATTTGAAACCGGTTCAGAATTCAGTTAAAACATATCTTGGTAGACCATGGCAGAAATATTCAAGAACGGTTGTAATGAAAAGTAATCTTGATGGTTTGATAAATTCACAAGGTTGGGCTCCATGGATGGGTGGTTTTGCATTGAGTACACTTTATTATGGTGAATATATGAATGTTGGTGGTGGTGCTAATACTGGTGGAAGAGTTAATTGGCCTGGTTTTCATGTTATTACTAATCCTTCTGAGGCTGTTAAATTTTCTGTTGGTAATTTTTTGGCTGCTGATTCTTGGATTTCAGGGAGTGGTGTGCCGTTTGATGCAGGTTTGTGA
Protein sequence

>MS.gene049155.t1

MLSNFTKLLSNSLSIINTLTSSPSSSSTSSSTKQNGGRRLLSDKFPYWLSRSDRKLLQATPGSGTGPSADIVVAQDGSGNYKTISEGVDAAAKLSGKGRVVIHLKAGVYKENVDIKRTVTNLMIFGDGMDSTIVTAVMGDGFIAKDMTFENTAGPQKHQAVALRSGADHSVFYRCAFKGYQDTLYAYANRQFYRDCNIYGTIDFIFGNAVTVLQNCNIFVRKPMSNQQNTVTAQGRTDPNENTGIVIHNCRITAANDLKPVQNSVKTYLGRPWQKYSRTVVMKSNLDGLINSQGWAPWMGGFALSTLYYGEYMNVGGGANTGGRVNWPGFHVITNPSEAVKFSVGNFLAADSWISGSGVPFDAGL