Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049276.t1 | XP_003602629.1 | 94.7 | 208 | 9 | 2 | 1 | 206 | 1 | 208 | 2.80E-110 | 407.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049276.t1 | Q8GWK6 | 42.0 | 207 | 94 | 6 | 5 | 205 | 1 | 187 | 2.7e-37 | 156.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049276.t1 | G7JBM0 | 94.7 | 208 | 9 | 2 | 1 | 206 | 1 | 208 | 2.0e-110 | 407.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene049276.t1 | TF | NAC |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049276 | MS.gene054964 | 0.905854 | 2.76E-80 | -1.69E-46 |
| MS.gene049276 | MS.gene06395 | 0.932397 | 9.06E-95 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049276.t1 | MTR_3g096400 | 94.712 | 208 | 9 | 2 | 1 | 206 | 1 | 208 | 6.62e-143 | 397 |
| MS.gene049276.t1 | MTR_8g093790 | 57.843 | 204 | 58 | 9 | 5 | 206 | 8 | 185 | 4.86e-65 | 199 |
| MS.gene049276.t1 | MTR_4g094302 | 42.500 | 200 | 94 | 6 | 7 | 205 | 11 | 190 | 1.65e-46 | 152 |
| MS.gene049276.t1 | MTR_4g094302 | 49.180 | 122 | 59 | 3 | 7 | 127 | 11 | 130 | 1.23e-37 | 128 |
| MS.gene049276.t1 | MTR_5g041940 | 32.864 | 213 | 119 | 7 | 5 | 201 | 1 | 205 | 8.34e-30 | 111 |
| MS.gene049276.t1 | MTR_4g081870 | 37.888 | 161 | 84 | 6 | 6 | 158 | 8 | 160 | 3.06e-27 | 104 |
| MS.gene049276.t1 | MTR_2g080010 | 36.810 | 163 | 90 | 5 | 7 | 158 | 15 | 175 | 5.20e-27 | 105 |
| MS.gene049276.t1 | MTR_7g100990 | 36.810 | 163 | 87 | 6 | 5 | 158 | 9 | 164 | 7.45e-26 | 102 |
| MS.gene049276.t1 | MTR_4g108760 | 40.373 | 161 | 76 | 7 | 7 | 158 | 17 | 166 | 1.34e-25 | 102 |
| MS.gene049276.t1 | MTR_4g089135 | 34.286 | 175 | 90 | 5 | 7 | 158 | 15 | 187 | 3.23e-25 | 100 |
| MS.gene049276.t1 | MTR_2157s0010 | 31.677 | 161 | 100 | 3 | 7 | 158 | 8 | 167 | 3.53e-25 | 99.4 |
| MS.gene049276.t1 | MTR_3g435150 | 37.654 | 162 | 87 | 4 | 3 | 158 | 12 | 165 | 4.59e-25 | 99.8 |
| MS.gene049276.t1 | MTR_3g109340 | 40.373 | 161 | 74 | 6 | 7 | 158 | 22 | 169 | 1.59e-24 | 99.0 |
| MS.gene049276.t1 | MTR_2g079990 | 33.125 | 160 | 91 | 3 | 5 | 158 | 14 | 163 | 5.06e-24 | 97.8 |
| MS.gene049276.t1 | MTR_2g093810 | 36.420 | 162 | 81 | 7 | 7 | 156 | 14 | 165 | 5.88e-24 | 97.1 |
| MS.gene049276.t1 | MTR_3g109340 | 39.130 | 161 | 77 | 6 | 7 | 158 | 22 | 170 | 6.00e-24 | 97.4 |
| MS.gene049276.t1 | MTR_3g098810 | 32.515 | 163 | 96 | 4 | 4 | 157 | 11 | 168 | 9.53e-24 | 94.7 |
| MS.gene049276.t1 | MTR_2g062730 | 32.317 | 164 | 89 | 5 | 5 | 158 | 8 | 159 | 1.39e-23 | 96.3 |
| MS.gene049276.t1 | MTR_3g088110 | 32.515 | 163 | 96 | 4 | 1 | 157 | 1 | 155 | 1.58e-23 | 95.1 |
| MS.gene049276.t1 | MTR_3g070030 | 35.795 | 176 | 95 | 6 | 5 | 172 | 17 | 182 | 1.83e-23 | 96.3 |
| MS.gene049276.t1 | MTR_8g094580 | 32.121 | 165 | 95 | 4 | 1 | 157 | 1 | 156 | 2.72e-23 | 94.7 |
| MS.gene049276.t1 | MTR_1g008740 | 40.000 | 165 | 71 | 8 | 7 | 158 | 27 | 176 | 3.17e-23 | 95.5 |
| MS.gene049276.t1 | MTR_1g008740 | 38.547 | 179 | 80 | 9 | 7 | 170 | 13 | 176 | 3.67e-23 | 95.1 |
| MS.gene049276.t1 | MTR_7g005280 | 35.185 | 162 | 80 | 5 | 5 | 157 | 13 | 158 | 5.74e-23 | 93.2 |
| MS.gene049276.t1 | MTR_6g084430 | 37.500 | 160 | 78 | 6 | 7 | 158 | 5 | 150 | 1.43e-22 | 93.2 |
| MS.gene049276.t1 | MTR_3g064580 | 32.022 | 178 | 104 | 4 | 5 | 174 | 4 | 172 | 1.76e-22 | 95.1 |
| MS.gene049276.t1 | MTR_8g059170 | 32.022 | 178 | 105 | 4 | 5 | 176 | 12 | 179 | 1.94e-22 | 93.2 |
| MS.gene049276.t1 | MTR_8g099750 | 30.625 | 160 | 98 | 4 | 4 | 156 | 11 | 164 | 7.97e-22 | 89.4 |
| MS.gene049276.t1 | MTR_2g079990 | 30.726 | 179 | 98 | 4 | 5 | 158 | 14 | 191 | 1.30e-21 | 91.3 |
| MS.gene049276.t1 | MTR_7g085220 | 32.370 | 173 | 94 | 7 | 5 | 161 | 6 | 171 | 1.63e-21 | 90.5 |
| MS.gene049276.t1 | MTR_4g035590 | 32.222 | 180 | 97 | 7 | 7 | 175 | 8 | 173 | 2.14e-21 | 90.5 |
| MS.gene049276.t1 | MTR_2g078700 | 36.646 | 161 | 84 | 6 | 7 | 158 | 23 | 174 | 2.71e-21 | 90.5 |
| MS.gene049276.t1 | MTR_3g096920 | 31.447 | 159 | 95 | 4 | 5 | 157 | 5 | 155 | 3.83e-21 | 89.0 |
| MS.gene049276.t1 | MTR_2g064470 | 34.161 | 161 | 85 | 6 | 5 | 157 | 9 | 156 | 4.11e-21 | 89.0 |
| MS.gene049276.t1 | MTR_6g477900 | 36.641 | 131 | 74 | 3 | 5 | 127 | 4 | 133 | 6.32e-21 | 87.4 |
| MS.gene049276.t1 | MTR_8g024480 | 30.247 | 162 | 103 | 3 | 6 | 158 | 14 | 174 | 6.48e-21 | 89.7 |
| MS.gene049276.t1 | MTR_3g098810 | 34.307 | 137 | 79 | 3 | 4 | 131 | 11 | 145 | 8.89e-21 | 85.5 |
| MS.gene049276.t1 | MTR_7g085260 | 31.132 | 212 | 127 | 5 | 7 | 206 | 17 | 221 | 1.09e-20 | 89.0 |
| MS.gene049276.t1 | MTR_5g076850 | 32.787 | 183 | 105 | 5 | 5 | 179 | 4 | 176 | 1.40e-20 | 89.4 |
| MS.gene049276.t1 | MTR_8g467490 | 31.214 | 173 | 105 | 5 | 9 | 171 | 16 | 184 | 1.72e-20 | 88.6 |
| MS.gene049276.t1 | MTR_5g012080 | 29.341 | 167 | 99 | 4 | 1 | 158 | 1 | 157 | 2.37e-20 | 87.4 |
| MS.gene049276.t1 | MTR_1g069805 | 29.714 | 175 | 98 | 4 | 5 | 167 | 8 | 169 | 5.49e-20 | 85.5 |
| MS.gene049276.t1 | MTR_3g096140 | 30.846 | 201 | 115 | 8 | 1 | 189 | 1 | 189 | 8.57e-20 | 85.1 |
| MS.gene049276.t1 | MTR_8g093580 | 34.146 | 164 | 88 | 5 | 4 | 158 | 3 | 155 | 2.57e-19 | 85.5 |
| MS.gene049276.t1 | MTR_3g096140 | 30.846 | 201 | 115 | 8 | 1 | 189 | 1 | 189 | 2.58e-19 | 84.7 |
| MS.gene049276.t1 | MTR_4g101680 | 31.319 | 182 | 102 | 6 | 1 | 173 | 1 | 168 | 3.01e-19 | 84.7 |
| MS.gene049276.t1 | MTR_3g070040 | 33.140 | 172 | 102 | 4 | 5 | 171 | 6 | 169 | 3.91e-19 | 84.0 |
| MS.gene049276.t1 | MTR_7g097090 | 30.675 | 163 | 87 | 4 | 5 | 157 | 8 | 154 | 4.85e-19 | 83.2 |
| MS.gene049276.t1 | MTR_6g011860 | 29.114 | 158 | 106 | 1 | 7 | 158 | 15 | 172 | 1.12e-18 | 83.2 |
| MS.gene049276.t1 | MTR_2g064090 | 29.630 | 162 | 97 | 3 | 5 | 158 | 4 | 156 | 1.33e-18 | 82.8 |
| MS.gene049276.t1 | MTR_7g011120 | 32.530 | 166 | 93 | 4 | 5 | 158 | 6 | 164 | 1.33e-18 | 82.4 |
| MS.gene049276.t1 | MTR_6g012670 | 32.704 | 159 | 93 | 4 | 6 | 158 | 19 | 169 | 1.92e-18 | 82.0 |
| MS.gene049276.t1 | MTR_4g036030 | 30.178 | 169 | 93 | 6 | 1 | 158 | 1 | 155 | 2.37e-18 | 82.0 |
| MS.gene049276.t1 | MTR_5g040420 | 31.214 | 173 | 104 | 6 | 9 | 171 | 16 | 183 | 2.68e-18 | 82.4 |
| MS.gene049276.t1 | MTR_1g090720 | 32.353 | 170 | 102 | 5 | 7 | 168 | 42 | 206 | 3.89e-18 | 82.0 |
| MS.gene049276.t1 | MTR_1g096430 | 29.012 | 162 | 92 | 6 | 7 | 158 | 7 | 155 | 6.90e-18 | 80.9 |
| MS.gene049276.t1 | MTR_2g086690 | 31.395 | 172 | 95 | 7 | 1 | 159 | 1 | 162 | 8.76e-18 | 79.3 |
| MS.gene049276.t1 | MTR_2g068880 | 29.878 | 164 | 99 | 5 | 9 | 158 | 24 | 185 | 9.44e-18 | 80.1 |
| MS.gene049276.t1 | MTR_5g014300 | 27.835 | 194 | 114 | 3 | 5 | 184 | 4 | 185 | 1.22e-17 | 80.1 |
| MS.gene049276.t1 | MTR_8g063550 | 33.742 | 163 | 90 | 5 | 4 | 158 | 3 | 155 | 1.29e-17 | 80.5 |
| MS.gene049276.t1 | MTR_3g093050 | 33.750 | 160 | 88 | 4 | 7 | 158 | 22 | 171 | 1.43e-17 | 80.5 |
| MS.gene049276.t1 | MTR_8g023930 | 36.154 | 130 | 72 | 4 | 7 | 126 | 24 | 152 | 1.49e-17 | 80.5 |
| MS.gene049276.t1 | MTR_2g086880 | 32.540 | 126 | 77 | 2 | 9 | 127 | 20 | 144 | 1.53e-17 | 80.5 |
| MS.gene049276.t1 | MTR_3g116070 | 35.252 | 139 | 82 | 3 | 7 | 137 | 23 | 161 | 1.54e-17 | 79.7 |
| MS.gene049276.t1 | MTR_8g063550 | 31.795 | 195 | 108 | 8 | 4 | 184 | 3 | 186 | 1.66e-17 | 79.7 |
| MS.gene049276.t1 | MTR_2g086880 | 32.540 | 126 | 77 | 2 | 9 | 127 | 20 | 144 | 1.78e-17 | 80.5 |
| MS.gene049276.t1 | MTR_3g093050 | 33.750 | 160 | 88 | 4 | 7 | 158 | 22 | 171 | 1.90e-17 | 80.5 |
| MS.gene049276.t1 | MTR_7g011130 | 28.378 | 222 | 131 | 5 | 5 | 205 | 17 | 231 | 2.19e-17 | 79.3 |
| MS.gene049276.t1 | MTR_5g069030 | 32.919 | 161 | 90 | 5 | 6 | 158 | 24 | 174 | 2.27e-17 | 80.1 |
| MS.gene049276.t1 | MTR_8g063550 | 31.795 | 195 | 108 | 8 | 4 | 184 | 3 | 186 | 2.47e-17 | 79.7 |
| MS.gene049276.t1 | MTR_4g052620 | 30.000 | 170 | 100 | 5 | 1 | 159 | 1 | 162 | 2.62e-17 | 78.2 |
| MS.gene049276.t1 | MTR_2g068920 | 29.193 | 161 | 100 | 4 | 9 | 156 | 23 | 182 | 2.79e-17 | 78.6 |
| MS.gene049276.t1 | MTR_5g090970 | 27.673 | 159 | 105 | 4 | 9 | 158 | 20 | 177 | 3.63e-17 | 78.6 |
| MS.gene049276.t1 | MTR_8g023840 | 33.129 | 163 | 78 | 8 | 7 | 156 | 11 | 155 | 6.05e-17 | 78.6 |
| MS.gene049276.t1 | MTR_5g021710 | 28.221 | 163 | 92 | 6 | 7 | 158 | 8 | 156 | 8.74e-17 | 77.8 |
| MS.gene049276.t1 | MTR_1g090723 | 31.250 | 160 | 89 | 7 | 9 | 158 | 10 | 158 | 1.08e-16 | 78.2 |
| MS.gene049276.t1 | MTR_3g096920 | 30.534 | 131 | 83 | 2 | 5 | 129 | 5 | 133 | 1.56e-16 | 76.6 |
| MS.gene049276.t1 | MTR_3g093040 | 31.288 | 163 | 94 | 4 | 4 | 158 | 105 | 257 | 1.66e-16 | 76.6 |
| MS.gene049276.t1 | MTR_8g076110 | 30.534 | 131 | 79 | 4 | 7 | 127 | 6 | 134 | 1.97e-16 | 76.3 |
| MS.gene049276.t1 | MTR_1g090723 | 30.000 | 160 | 90 | 6 | 9 | 158 | 10 | 157 | 2.71e-16 | 77.0 |
| MS.gene049276.t1 | MTR_1g090723 | 30.000 | 160 | 90 | 6 | 9 | 158 | 10 | 157 | 2.81e-16 | 77.0 |
| MS.gene049276.t1 | MTR_6g032770 | 33.594 | 128 | 78 | 2 | 7 | 127 | 18 | 145 | 3.43e-16 | 76.3 |
| MS.gene049276.t1 | MTR_4g098630 | 30.357 | 168 | 96 | 5 | 5 | 162 | 4 | 160 | 7.06e-16 | 74.7 |
| MS.gene049276.t1 | MTR_4g134460 | 30.128 | 156 | 92 | 3 | 9 | 158 | 56 | 200 | 7.12e-16 | 75.5 |
| MS.gene049276.t1 | MTR_8g023900 | 30.357 | 168 | 81 | 7 | 7 | 156 | 188 | 337 | 7.58e-16 | 75.5 |
| MS.gene049276.t1 | MTR_5g090970 | 28.571 | 161 | 100 | 6 | 9 | 158 | 20 | 176 | 9.55e-16 | 74.3 |
| MS.gene049276.t1 | MTR_0036s0150 | 30.435 | 161 | 88 | 7 | 9 | 158 | 7 | 154 | 1.40e-15 | 74.7 |
| MS.gene049276.t1 | MTR_1g097300 | 30.709 | 127 | 79 | 2 | 9 | 127 | 21 | 146 | 3.19e-13 | 68.2 |
| MS.gene049276.t1 | MTR_7g105170 | 24.762 | 210 | 130 | 7 | 7 | 195 | 4 | 206 | 6.68e-13 | 65.9 |
| MS.gene049276.t1 | MTR_3g096140 | 28.889 | 180 | 104 | 8 | 22 | 189 | 1 | 168 | 2.50e-12 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049276.t1 | AT5G64530 | 42.995 | 207 | 92 | 6 | 5 | 205 | 1 | 187 | 3.41e-44 | 146 |
| MS.gene049276.t1 | AT5G64530 | 50.806 | 124 | 54 | 3 | 5 | 127 | 1 | 118 | 5.24e-35 | 121 |
| MS.gene049276.t1 | AT1G61110 | 36.257 | 171 | 94 | 4 | 7 | 165 | 16 | 183 | 3.50e-29 | 110 |
| MS.gene049276.t1 | AT2G24430 | 40.000 | 160 | 77 | 5 | 7 | 158 | 16 | 164 | 1.51e-26 | 103 |
| MS.gene049276.t1 | AT2G24430 | 40.000 | 160 | 77 | 5 | 7 | 158 | 16 | 164 | 1.51e-26 | 103 |
| MS.gene049276.t1 | AT1G01720 | 36.364 | 165 | 88 | 6 | 1 | 157 | 1 | 156 | 5.74e-26 | 101 |
| MS.gene049276.t1 | AT5G07680 | 39.623 | 159 | 78 | 6 | 7 | 157 | 3 | 151 | 7.77e-26 | 102 |
| MS.gene049276.t1 | AT5G07680 | 39.623 | 159 | 78 | 6 | 7 | 157 | 17 | 165 | 8.69e-26 | 102 |
| MS.gene049276.t1 | AT3G04070 | 35.976 | 164 | 89 | 5 | 7 | 158 | 10 | 169 | 5.70e-25 | 100 |
| MS.gene049276.t1 | AT3G04060 | 37.805 | 164 | 83 | 6 | 3 | 157 | 16 | 169 | 7.17e-25 | 99.8 |
| MS.gene049276.t1 | AT1G52890 | 33.750 | 160 | 90 | 3 | 5 | 158 | 12 | 161 | 1.85e-24 | 98.2 |
| MS.gene049276.t1 | AT1G69490 | 34.591 | 159 | 90 | 5 | 7 | 158 | 9 | 160 | 1.91e-24 | 97.4 |
| MS.gene049276.t1 | AT3G18400 | 38.750 | 160 | 77 | 5 | 7 | 158 | 5 | 151 | 2.79e-24 | 97.8 |
| MS.gene049276.t1 | AT3G04070 | 34.270 | 178 | 89 | 6 | 7 | 158 | 10 | 185 | 4.27e-24 | 98.2 |
| MS.gene049276.t1 | AT5G39610 | 35.366 | 164 | 84 | 4 | 5 | 158 | 18 | 169 | 4.47e-24 | 96.7 |
| MS.gene049276.t1 | AT1G77450 | 33.951 | 162 | 93 | 4 | 2 | 157 | 5 | 158 | 5.74e-24 | 95.9 |
| MS.gene049276.t1 | AT5G61430 | 37.107 | 159 | 84 | 5 | 7 | 158 | 16 | 165 | 7.82e-24 | 97.1 |
| MS.gene049276.t1 | AT4G27410 | 33.125 | 160 | 91 | 4 | 5 | 158 | 12 | 161 | 8.69e-24 | 96.3 |
| MS.gene049276.t1 | AT5G18270 | 36.196 | 163 | 87 | 5 | 3 | 157 | 17 | 170 | 1.57e-23 | 96.3 |
| MS.gene049276.t1 | AT5G08790 | 28.155 | 206 | 133 | 4 | 1 | 197 | 1 | 200 | 1.74e-23 | 95.1 |
| MS.gene049276.t1 | AT5G18270 | 35.583 | 163 | 88 | 5 | 3 | 157 | 17 | 170 | 2.67e-23 | 95.5 |
| MS.gene049276.t1 | AT3G15500 | 32.500 | 160 | 92 | 3 | 5 | 158 | 12 | 161 | 3.65e-23 | 94.7 |
| MS.gene049276.t1 | AT5G22290 | 36.029 | 136 | 79 | 3 | 9 | 137 | 23 | 157 | 8.66e-23 | 94.4 |
| MS.gene049276.t1 | AT5G46590 | 34.177 | 158 | 88 | 3 | 7 | 156 | 6 | 155 | 9.96e-23 | 93.2 |
| MS.gene049276.t1 | AT5G53950 | 37.349 | 166 | 86 | 6 | 2 | 158 | 12 | 168 | 1.75e-22 | 94.0 |
| MS.gene049276.t1 | AT3G15510 | 33.962 | 159 | 92 | 5 | 11 | 158 | 21 | 177 | 3.82e-22 | 92.8 |
| MS.gene049276.t1 | AT4G10350 | 31.000 | 200 | 112 | 7 | 7 | 191 | 9 | 197 | 4.30e-22 | 92.4 |
| MS.gene049276.t1 | AT3G61910 | 32.571 | 175 | 99 | 6 | 6 | 163 | 10 | 182 | 6.80e-22 | 91.7 |
| MS.gene049276.t1 | AT1G76420 | 37.423 | 163 | 75 | 7 | 7 | 157 | 22 | 169 | 1.30e-21 | 90.9 |
| MS.gene049276.t1 | AT3G10500 | 33.333 | 165 | 92 | 4 | 2 | 158 | 4 | 158 | 1.35e-21 | 92.4 |
| MS.gene049276.t1 | AT5G63790 | 32.164 | 171 | 100 | 5 | 1 | 163 | 44 | 206 | 1.45e-21 | 90.5 |
| MS.gene049276.t1 | AT5G63790 | 32.164 | 171 | 100 | 5 | 1 | 163 | 54 | 216 | 1.71e-21 | 90.5 |
| MS.gene049276.t1 | AT1G79580 | 31.138 | 167 | 92 | 5 | 2 | 158 | 12 | 165 | 4.06e-21 | 90.1 |
| MS.gene049276.t1 | AT1G79580 | 31.138 | 167 | 92 | 5 | 2 | 158 | 12 | 165 | 4.06e-21 | 90.1 |
| MS.gene049276.t1 | AT1G79580 | 31.138 | 167 | 92 | 5 | 2 | 158 | 12 | 165 | 4.06e-21 | 90.1 |
| MS.gene049276.t1 | AT1G79580 | 31.138 | 167 | 92 | 5 | 2 | 158 | 12 | 165 | 4.06e-21 | 90.1 |
| MS.gene049276.t1 | AT1G79580 | 31.138 | 167 | 92 | 5 | 2 | 158 | 12 | 165 | 4.06e-21 | 90.1 |
| MS.gene049276.t1 | AT3G44290 | 34.848 | 132 | 78 | 3 | 9 | 133 | 16 | 146 | 5.11e-21 | 87.4 |
| MS.gene049276.t1 | AT5G46590 | 36.154 | 130 | 75 | 2 | 7 | 128 | 6 | 135 | 6.87e-21 | 88.2 |
| MS.gene049276.t1 | AT3G12977 | 31.098 | 164 | 98 | 4 | 5 | 162 | 16 | 170 | 7.94e-21 | 87.8 |
| MS.gene049276.t1 | AT2G33480 | 34.783 | 161 | 84 | 6 | 4 | 157 | 12 | 158 | 9.22e-21 | 87.4 |
| MS.gene049276.t1 | AT5G04410 | 32.727 | 165 | 93 | 4 | 2 | 158 | 4 | 158 | 1.04e-20 | 89.7 |
| MS.gene049276.t1 | AT5G17260 | 32.716 | 162 | 92 | 3 | 5 | 158 | 4 | 156 | 1.04e-20 | 89.7 |
| MS.gene049276.t1 | AT4G27410 | 32.203 | 177 | 87 | 6 | 5 | 158 | 12 | 178 | 1.15e-20 | 88.2 |
| MS.gene049276.t1 | AT3G17730 | 35.878 | 131 | 75 | 3 | 5 | 127 | 4 | 133 | 1.48e-20 | 86.7 |
| MS.gene049276.t1 | AT2G46770 | 30.814 | 172 | 104 | 6 | 6 | 164 | 15 | 184 | 1.51e-20 | 88.2 |
| MS.gene049276.t1 | AT3G44290 | 34.848 | 132 | 78 | 3 | 9 | 133 | 16 | 146 | 1.88e-20 | 87.8 |
| MS.gene049276.t1 | AT5G13180 | 32.927 | 164 | 84 | 6 | 4 | 157 | 11 | 158 | 4.53e-20 | 85.5 |
| MS.gene049276.t1 | AT3G15170 | 35.669 | 157 | 87 | 4 | 7 | 156 | 20 | 169 | 4.84e-20 | 86.3 |
| MS.gene049276.t1 | AT1G33280 | 31.138 | 167 | 92 | 5 | 7 | 164 | 8 | 160 | 5.20e-20 | 86.3 |
| MS.gene049276.t1 | AT3G29035 | 40.458 | 131 | 67 | 4 | 5 | 127 | 22 | 149 | 7.15e-20 | 85.9 |
| MS.gene049276.t1 | AT4G35580 | 31.633 | 196 | 100 | 6 | 7 | 183 | 9 | 189 | 1.24e-19 | 86.7 |
| MS.gene049276.t1 | AT2G33480 | 34.161 | 161 | 83 | 6 | 4 | 157 | 12 | 156 | 1.30e-19 | 84.3 |
| MS.gene049276.t1 | AT4G35580 | 31.633 | 196 | 100 | 6 | 7 | 183 | 9 | 189 | 1.73e-19 | 86.3 |
| MS.gene049276.t1 | AT4G35580 | 31.633 | 196 | 100 | 6 | 7 | 183 | 9 | 189 | 1.75e-19 | 86.3 |
| MS.gene049276.t1 | AT1G32510 | 30.488 | 164 | 92 | 3 | 7 | 156 | 6 | 161 | 2.61e-19 | 84.0 |
| MS.gene049276.t1 | AT1G56010 | 31.677 | 161 | 94 | 5 | 5 | 157 | 17 | 169 | 2.68e-19 | 84.3 |
| MS.gene049276.t1 | AT1G65910 | 32.716 | 162 | 91 | 4 | 5 | 158 | 4 | 155 | 4.33e-19 | 85.1 |
| MS.gene049276.t1 | AT3G03200 | 30.864 | 162 | 95 | 3 | 5 | 158 | 4 | 156 | 5.14e-19 | 84.7 |
| MS.gene049276.t1 | AT1G32770 | 30.120 | 166 | 99 | 5 | 6 | 158 | 15 | 176 | 5.88e-19 | 84.0 |
| MS.gene049276.t1 | AT2G02450 | 28.421 | 190 | 115 | 3 | 9 | 188 | 53 | 231 | 6.64e-19 | 84.0 |
| MS.gene049276.t1 | AT1G12260 | 27.650 | 217 | 124 | 8 | 1 | 205 | 1 | 196 | 7.36e-19 | 83.6 |
| MS.gene049276.t1 | AT2G02450 | 28.421 | 190 | 115 | 3 | 9 | 188 | 53 | 231 | 9.61e-19 | 83.6 |
| MS.gene049276.t1 | AT5G62380 | 29.825 | 171 | 91 | 7 | 1 | 158 | 1 | 155 | 1.15e-18 | 83.2 |
| MS.gene049276.t1 | AT5G62380 | 29.825 | 171 | 91 | 7 | 1 | 158 | 1 | 155 | 1.15e-18 | 83.2 |
| MS.gene049276.t1 | AT1G12260 | 27.650 | 217 | 124 | 8 | 1 | 205 | 1 | 196 | 1.41e-18 | 83.2 |
| MS.gene049276.t1 | AT2G43000 | 28.205 | 156 | 97 | 3 | 9 | 158 | 20 | 166 | 1.81e-18 | 81.6 |
| MS.gene049276.t1 | AT5G24590 | 30.061 | 163 | 97 | 4 | 4 | 158 | 10 | 163 | 2.30e-18 | 82.8 |
| MS.gene049276.t1 | AT4G17980 | 32.727 | 165 | 93 | 5 | 7 | 162 | 6 | 161 | 2.59e-18 | 80.9 |
| MS.gene049276.t1 | AT1G52880 | 31.138 | 167 | 85 | 6 | 11 | 158 | 21 | 176 | 3.11e-18 | 81.6 |
| MS.gene049276.t1 | AT4G17980 | 32.704 | 159 | 91 | 4 | 7 | 156 | 6 | 157 | 3.42e-18 | 80.9 |
| MS.gene049276.t1 | AT1G33060 | 32.704 | 159 | 89 | 4 | 7 | 157 | 24 | 172 | 6.84e-18 | 81.6 |
| MS.gene049276.t1 | AT1G33060 | 32.704 | 159 | 89 | 4 | 7 | 157 | 24 | 172 | 7.12e-18 | 81.6 |
| MS.gene049276.t1 | AT2G27300 | 34.351 | 131 | 78 | 3 | 4 | 127 | 11 | 140 | 9.53e-18 | 80.5 |
| MS.gene049276.t1 | AT2G18060 | 29.012 | 162 | 92 | 6 | 7 | 158 | 9 | 157 | 1.14e-17 | 80.5 |
| MS.gene049276.t1 | AT2G18060 | 29.012 | 162 | 92 | 6 | 7 | 158 | 9 | 157 | 1.14e-17 | 80.5 |
| MS.gene049276.t1 | AT4G36160 | 28.395 | 162 | 93 | 5 | 7 | 158 | 14 | 162 | 1.94e-17 | 79.7 |
| MS.gene049276.t1 | AT4G36160 | 28.395 | 162 | 93 | 5 | 7 | 158 | 10 | 158 | 2.16e-17 | 79.7 |
| MS.gene049276.t1 | AT4G36160 | 28.395 | 162 | 93 | 5 | 7 | 158 | 10 | 158 | 2.16e-17 | 79.7 |
| MS.gene049276.t1 | AT4G28530 | 28.571 | 175 | 89 | 4 | 6 | 157 | 9 | 170 | 2.56e-17 | 79.3 |
| MS.gene049276.t1 | AT1G26870 | 30.247 | 162 | 100 | 4 | 7 | 158 | 16 | 174 | 3.53e-17 | 79.3 |
| MS.gene049276.t1 | AT5G22380 | 31.361 | 169 | 95 | 5 | 1 | 157 | 1 | 160 | 5.10e-17 | 77.0 |
| MS.gene049276.t1 | AT1G62700 | 29.167 | 168 | 96 | 6 | 1 | 158 | 1 | 155 | 6.75e-17 | 78.6 |
| MS.gene049276.t1 | AT1G62700 | 29.167 | 168 | 96 | 6 | 1 | 158 | 1 | 155 | 6.75e-17 | 78.6 |
| MS.gene049276.t1 | AT5G39820 | 28.177 | 181 | 109 | 6 | 9 | 169 | 22 | 201 | 1.35e-16 | 77.0 |
| MS.gene049276.t1 | AT1G71930 | 27.647 | 170 | 98 | 7 | 1 | 158 | 1 | 157 | 1.46e-16 | 77.0 |
| MS.gene049276.t1 | AT1G71930 | 27.647 | 170 | 98 | 7 | 1 | 158 | 1 | 157 | 1.46e-16 | 77.0 |
| MS.gene049276.t1 | AT1G54330 | 29.143 | 175 | 97 | 4 | 5 | 168 | 4 | 162 | 1.92e-16 | 76.3 |
| MS.gene049276.t1 | AT3G10480 | 32.759 | 174 | 97 | 6 | 7 | 172 | 27 | 188 | 2.05e-16 | 77.0 |
| MS.gene049276.t1 | AT3G12910 | 26.036 | 169 | 110 | 6 | 3 | 158 | 18 | 184 | 6.90e-16 | 74.7 |
| MS.gene049276.t1 | AT5G66300 | 27.778 | 162 | 95 | 6 | 7 | 158 | 12 | 161 | 7.89e-16 | 74.7 |
| MS.gene049276.t1 | AT1G32870 | 36.220 | 127 | 74 | 2 | 7 | 127 | 10 | 135 | 1.23e-15 | 75.1 |
| MS.gene049276.t1 | AT1G32870 | 36.220 | 127 | 74 | 2 | 7 | 127 | 10 | 135 | 1.27e-15 | 75.1 |
| MS.gene049276.t1 | AT5G04395 | 33.103 | 145 | 76 | 4 | 7 | 130 | 28 | 172 | 1.28e-15 | 72.0 |
| MS.gene049276.t1 | AT1G32870 | 36.220 | 127 | 74 | 2 | 7 | 127 | 46 | 171 | 1.71e-15 | 74.7 |
| MS.gene049276.t1 | AT3G49530 | 28.571 | 161 | 96 | 5 | 7 | 158 | 13 | 163 | 2.00e-15 | 74.3 |
| MS.gene049276.t1 | AT3G49530 | 28.571 | 161 | 96 | 5 | 7 | 158 | 13 | 163 | 3.17e-15 | 73.9 |
| MS.gene049276.t1 | AT3G10480 | 32.571 | 175 | 97 | 7 | 7 | 172 | 27 | 189 | 4.10e-15 | 73.6 |
| MS.gene049276.t1 | AT1G34190 | 32.283 | 127 | 77 | 2 | 9 | 127 | 18 | 143 | 7.54e-15 | 72.8 |
| MS.gene049276.t1 | AT1G02230 | 32.090 | 134 | 76 | 4 | 8 | 129 | 4 | 134 | 1.02e-14 | 72.0 |
| MS.gene049276.t1 | AT3G10490 | 32.000 | 175 | 98 | 7 | 7 | 172 | 27 | 189 | 1.10e-14 | 70.5 |
| MS.gene049276.t1 | AT5G14000 | 32.934 | 167 | 79 | 7 | 5 | 158 | 13 | 159 | 1.25e-14 | 70.1 |
| MS.gene049276.t1 | AT5G64060 | 28.235 | 170 | 103 | 4 | 7 | 168 | 6 | 164 | 5.37e-14 | 70.1 |
| MS.gene049276.t1 | AT3G10490 | 32.000 | 175 | 98 | 7 | 7 | 172 | 27 | 189 | 6.77e-14 | 70.1 |
| MS.gene049276.t1 | AT2G17040 | 32.143 | 140 | 83 | 4 | 1 | 129 | 1 | 139 | 2.57e-13 | 67.4 |
| MS.gene049276.t1 | AT5G14000 | 33.099 | 142 | 80 | 5 | 5 | 137 | 13 | 148 | 2.63e-13 | 65.5 |
| MS.gene049276.t1 | AT1G34180 | 31.496 | 127 | 78 | 2 | 9 | 127 | 18 | 143 | 6.14e-13 | 67.0 |
| MS.gene049276.t1 | AT1G34180 | 31.496 | 127 | 78 | 2 | 9 | 127 | 18 | 143 | 6.47e-13 | 67.0 |
| MS.gene049276.t1 | AT3G44350 | 28.395 | 162 | 91 | 6 | 10 | 157 | 8 | 158 | 7.70e-13 | 65.5 |
| MS.gene049276.t1 | AT5G09330 | 27.879 | 165 | 99 | 5 | 5 | 160 | 4 | 157 | 3.49e-12 | 65.1 |
| MS.gene049276.t1 | AT5G09330 | 27.879 | 165 | 99 | 5 | 5 | 160 | 4 | 157 | 3.49e-12 | 65.1 |
| MS.gene049276.t1 | AT5G09330 | 27.879 | 165 | 99 | 5 | 5 | 160 | 4 | 157 | 3.49e-12 | 65.1 |
| MS.gene049276.t1 | AT5G09330 | 27.879 | 165 | 99 | 5 | 5 | 160 | 4 | 157 | 3.49e-12 | 65.1 |
| MS.gene049276.t1 | AT5G09330 | 27.879 | 165 | 99 | 5 | 5 | 160 | 4 | 157 | 3.49e-12 | 65.1 |
| MS.gene049276.t1 | AT3G44350 | 29.412 | 136 | 79 | 4 | 10 | 131 | 8 | 140 | 5.16e-12 | 62.0 |
| MS.gene049276.t1 | AT5G61430 | 36.111 | 108 | 50 | 6 | 60 | 158 | 5 | 102 | 2.46e-11 | 61.6 |
Find 46 sgRNAs with CRISPR-Local
Find 68 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTTCTTCATTCCCACTTTC+TGG | 0.138453 | 3.3:+79861837 | None:intergenic |
| AATAAATCCAGTACCGAAAA+TGG | 0.244913 | 3.3:-79861908 | MS.gene049276:CDS |
| ATTCGCCAATGTGGAATAAT+AGG | 0.293651 | 3.3:+79861813 | None:intergenic |
| CTTGTTCCTTGGGAATTAAA+TGG | 0.298684 | 3.3:-79862353 | MS.gene049276:intron |
| CCAGTACCGAAAATGGATAT+TGG | 0.313420 | 3.3:-79861901 | MS.gene049276:CDS |
| ATCTGTCTCTACTTGTTCCT+TGG | 0.327451 | 3.3:-79862364 | MS.gene049276:CDS |
| AATGGATATTGGGAGGAAAT+TGG | 0.352799 | 3.3:-79861890 | MS.gene049276:CDS |
| TCTGTCTCTACTTGTTCCTT+GGG | 0.353376 | 3.3:-79862363 | MS.gene049276:CDS |
| TGGTCAGTGCCTGAAAATAT+TGG | 0.355149 | 3.3:+79861857 | None:intergenic |
| GAATATCATATTTGCTCCTC+TGG | 0.364606 | 3.3:-79861755 | MS.gene049276:CDS |
| TCTAGATCAGGGATGAAGTT+TGG | 0.373168 | 3.3:+79862386 | None:intergenic |
| TGGCATGACAGGGTGAAAAT+TGG | 0.385812 | 3.3:-79861565 | MS.gene049276:intron |
| GATATTGTCAAGCTTCCTCC+TGG | 0.398901 | 3.3:-79862485 | MS.gene049276:CDS |
| CAGTACCGAAAATGGATATT+GGG | 0.414415 | 3.3:-79861900 | MS.gene049276:CDS |
| CACAAAGTTCTGAAACAAGT+TGG | 0.433370 | 3.3:-79861787 | MS.gene049276:CDS |
| AGTAGAGACAGATCTAGATC+AGG | 0.454456 | 3.3:+79862374 | None:intergenic |
| AGGATAAGTTCTTCATCTGT+TGG | 0.457202 | 3.3:+79862449 | None:intergenic |
| ACAGTGGAACTGATCTTTCA+TGG | 0.461699 | 3.3:-79861454 | MS.gene049276:CDS |
| AGGGTGAAAATTGGAGCGAA+TGG | 0.500867 | 3.3:-79861556 | MS.gene049276:CDS |
| GGGTGAAAATTGGAGCGAAT+GGG | 0.512033 | 3.3:-79861555 | MS.gene049276:CDS |
| ACAAAGTTCTGAAACAAGTT+GGG | 0.512054 | 3.3:-79861786 | MS.gene049276:CDS |
| TTCAGGCACTGACCAGAAAG+TGG | 0.528880 | 3.3:-79861849 | MS.gene049276:CDS |
| ATATTGTCAAGCTTCCTCCT+GGG | 0.550955 | 3.3:-79862484 | MS.gene049276:CDS |
| CAAAGTACTGTTTCATATCA+CGG | 0.554478 | 3.3:-79861725 | MS.gene049276:CDS |
| TTCATATCACGGTGATAAAG+TGG | 0.556185 | 3.3:-79861714 | MS.gene049276:intron |
| GGAGTACCATTTAATTCCCA+AGG | 0.563304 | 3.3:+79862347 | None:intergenic |
| CCTTAGAATAGAGAAAATGA+AGG | 0.569373 | 3.3:+79862429 | None:intergenic |
| CTATTTCTTCGCCAAAGTGA+AGG | 0.570044 | 3.3:-79861933 | MS.gene049276:CDS |
| TAGTGATTTACACCTTCTTG+AGG | 0.571144 | 3.3:+79861494 | None:intergenic |
| GTAGAGACAGATCTAGATCA+GGG | 0.575051 | 3.3:+79862375 | None:intergenic |
| AAGAACATGTATCCTCAAGA+AGG | 0.582925 | 3.3:-79861506 | MS.gene049276:CDS |
| TCAGGCACTGACCAGAAAGT+GGG | 0.598459 | 3.3:-79861848 | MS.gene049276:CDS |
| TACCGAAAATGGATATTGGG+AGG | 0.624892 | 3.3:-79861897 | MS.gene049276:CDS |
| TTTGGAGTTGGATGATGACA+TGG | 0.636188 | 3.3:-79861411 | MS.gene049276:CDS |
| TTTGTGCTAATTCGCCAATG+TGG | 0.638216 | 3.3:+79861804 | None:intergenic |
| ACAGATAAGGCATTGTGCGG+TGG | 0.648627 | 3.3:-79861968 | MS.gene049276:intron |
| CATACATAACTACTGAGGCA+TGG | 0.664163 | 3.3:+79861379 | None:intergenic |
| GAGTTGGATGATGACATGGA+GGG | 0.672071 | 3.3:-79861407 | MS.gene049276:CDS |
| AAGTACCTATTATTCCACAT+TGG | 0.679443 | 3.3:-79861818 | MS.gene049276:CDS |
| GTTGGAGAGAAGACAAACCC+AGG | 0.681756 | 3.3:+79862467 | None:intergenic |
| TAATGCATACATAACTACTG+AGG | 0.692062 | 3.3:+79861374 | None:intergenic |
| TGTACAGATAAGGCATTGTG+CGG | 0.708392 | 3.3:-79861971 | MS.gene049276:intron |
| GGAGAGAAGACAAACCCAGG+AGG | 0.709023 | 3.3:+79862470 | None:intergenic |
| AGTACTTTGATCAAATCCAG+AGG | 0.713491 | 3.3:+79861739 | None:intergenic |
| GGAGTTGGATGATGACATGG+AGG | 0.713793 | 3.3:-79861408 | MS.gene049276:CDS |
| AACAGCGATGATGATGACAG+TGG | 0.723595 | 3.3:-79861470 | MS.gene049276:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTAAAAATATTGAAGAAA+TGG | + | chr3.3:79861556-79861575 | None:intergenic | 10.0% |
| !! | CTATAGTTTAATTAATTAAA+TGG | - | chr3.3:79862280-79862299 | MS.gene049276:intron | 10.0% |
| !! | TTATTTAACATGTACAGATA+AGG | - | chr3.3:79861898-79861917 | MS.gene049276:CDS | 20.0% |
| ! | AAACTATAGATAGCTAACTA+GGG | + | chr3.3:79862269-79862288 | None:intergenic | 25.0% |
| ! | GAAAGAAAAAAAAAAAGACC+AGG | - | chr3.3:79861673-79861692 | MS.gene049276:intron | 25.0% |
| ! | GATACATAACATAAGAGATA+TGG | + | chr3.3:79861753-79861772 | None:intergenic | 25.0% |
| ! | TAAACTATAGATAGCTAACT+AGG | + | chr3.3:79862270-79862289 | None:intergenic | 25.0% |
| ! | TCATCGAAAGTAGTAAAATT+TGG | + | chr3.3:79861604-79861623 | None:intergenic | 25.0% |
| AAGTACCTATTATTCCACAT+TGG | - | chr3.3:79862061-79862080 | MS.gene049276:intron | 30.0% | |
| CCTTAGAATAGAGAAAATGA+AGG | + | chr3.3:79861453-79861472 | None:intergenic | 30.0% | |
| ! | AATAAATCCAGTACCGAAAA+TGG | - | chr3.3:79861971-79861990 | MS.gene049276:intron | 30.0% |
| ! | CCTTCATTTTCTCTATTCTA+AGG | - | chr3.3:79861450-79861469 | MS.gene049276:CDS | 30.0% |
| ! | GTTACAGTACCAATATTTTC+AGG | - | chr3.3:79862013-79862032 | MS.gene049276:intron | 30.0% |
| ! | TGTAGTATAAGTTCTAATCC+TGG | + | chr3.3:79861694-79861713 | None:intergenic | 30.0% |
| !! | ACAAAGTTCTGAAACAAGTT+GGG | - | chr3.3:79862093-79862112 | MS.gene049276:intron | 30.0% |
| !! | CAAAGTACTGTTTCATATCA+CGG | - | chr3.3:79862154-79862173 | MS.gene049276:intron | 30.0% |
| !! | GGATTTATTTTCCTTCACTT+TGG | + | chr3.3:79861960-79861979 | None:intergenic | 30.0% |
| AAGAACATGTATCCTCAAGA+AGG | - | chr3.3:79862373-79862392 | MS.gene049276:CDS | 35.0% | |
| AATGGATATTGGGAGGAAAT+TGG | - | chr3.3:79861989-79862008 | MS.gene049276:intron | 35.0% | |
| ACTCCAAAGACAGAAAAACT+TGG | + | chr3.3:79862456-79862475 | None:intergenic | 35.0% | |
| AGGATAAGTTCTTCATCTGT+TGG | + | chr3.3:79861433-79861452 | None:intergenic | 35.0% | |
| AGTACTTTGATCAAATCCAG+AGG | + | chr3.3:79862143-79862162 | None:intergenic | 35.0% | |
| ATTAAATGGTGCATCATGCA+TGG | - | chr3.3:79862294-79862313 | MS.gene049276:intron | 35.0% | |
| ATTCGCCAATGTGGAATAAT+AGG | + | chr3.3:79862069-79862088 | None:intergenic | 35.0% | |
| CTTGTTCCTTGGGAATTAAA+TGG | - | chr3.3:79861526-79861545 | MS.gene049276:CDS | 35.0% | |
| GAATATCATATTTGCTCCTC+TGG | - | chr3.3:79862124-79862143 | MS.gene049276:intron | 35.0% | |
| TAGTGATTTACACCTTCTTG+AGG | + | chr3.3:79862388-79862407 | None:intergenic | 35.0% | |
| TTCATATCACGGTGATAAAG+TGG | - | chr3.3:79862165-79862184 | MS.gene049276:intron | 35.0% | |
| TTCATCGAACATTCATGCAT+TGG | + | chr3.3:79861858-79861877 | None:intergenic | 35.0% | |
| ! | AGACCAAGTTTTTCTGTCTT+TGG | - | chr3.3:79862450-79862469 | MS.gene049276:CDS | 35.0% |
| ! | CAGTACCGAAAATGGATATT+GGG | - | chr3.3:79861979-79861998 | MS.gene049276:intron | 35.0% |
| ! | TAGCTGTGTGTATGTGATTT+TGG | + | chr3.3:79861795-79861814 | None:intergenic | 35.0% |
| ! | TTCCTCCCAATATCCATTTT+CGG | + | chr3.3:79861987-79862006 | None:intergenic | 35.0% |
| !! | CACAAAGTTCTGAAACAAGT+TGG | - | chr3.3:79862092-79862111 | MS.gene049276:intron | 35.0% |
| !!! | AGTTTTTCTGTCTTTGGAGT+TGG | - | chr3.3:79862456-79862475 | MS.gene049276:CDS | 35.0% |
| ACAGTGGAACTGATCTTTCA+TGG | - | chr3.3:79862425-79862444 | MS.gene049276:CDS | 40.0% | |
| ACTTCTTCATTCCCACTTTC+TGG | + | chr3.3:79862045-79862064 | None:intergenic | 40.0% | |
| AGTAGAGACAGATCTAGATC+AGG | + | chr3.3:79861508-79861527 | None:intergenic | 40.0% | |
| ATATTGTCAAGCTTCCTCCT+GGG | - | chr3.3:79861395-79861414 | MS.gene049276:CDS | 40.0% | |
| ATCTGTCTCTACTTGTTCCT+TGG | - | chr3.3:79861515-79861534 | MS.gene049276:CDS | 40.0% | |
| CATGCATTGGACATGTGTAT+TGG | + | chr3.3:79861845-79861864 | None:intergenic | 40.0% | |
| GTAGAGACAGATCTAGATCA+GGG | + | chr3.3:79861507-79861526 | None:intergenic | 40.0% | |
| TACCGAAAATGGATATTGGG+AGG | - | chr3.3:79861982-79862001 | MS.gene049276:intron | 40.0% | |
| TCTAGATCAGGGATGAAGTT+TGG | + | chr3.3:79861496-79861515 | None:intergenic | 40.0% | |
| TCTGTCTCTACTTGTTCCTT+GGG | - | chr3.3:79861516-79861535 | MS.gene049276:CDS | 40.0% | |
| TGGTCAGTGCCTGAAAATAT+TGG | + | chr3.3:79862025-79862044 | None:intergenic | 40.0% | |
| TTTGTGCTAATTCGCCAATG+TGG | + | chr3.3:79862078-79862097 | None:intergenic | 40.0% | |
| ! | CCAATATCCATTTTCGGTAC+TGG | + | chr3.3:79861981-79862000 | None:intergenic | 40.0% |
| ! | CCAGTACCGAAAATGGATAT+TGG | - | chr3.3:79861978-79861997 | MS.gene049276:intron | 40.0% |
| ! | CTATTTCTTCGCCAAAGTGA+AGG | - | chr3.3:79861946-79861965 | MS.gene049276:CDS | 40.0% |
| ! | GGAGTACCATTTAATTCCCA+AGG | + | chr3.3:79861535-79861554 | None:intergenic | 40.0% |
| ! | TTTGGAGTTGGATGATGACA+TGG | - | chr3.3:79862468-79862487 | MS.gene049276:CDS | 40.0% |
| !! | TGTACAGATAAGGCATTGTG+CGG | - | chr3.3:79861908-79861927 | MS.gene049276:CDS | 40.0% |
| AGGGTGAAAATTGGAGCGAA+TGG | - | chr3.3:79862323-79862342 | MS.gene049276:intron | 45.0% | |
| GAGTTGGATGATGACATGGA+GGG | - | chr3.3:79862472-79862491 | MS.gene049276:CDS | 45.0% | |
| GATATTGTCAAGCTTCCTCC+TGG | - | chr3.3:79861394-79861413 | MS.gene049276:CDS | 45.0% | |
| GGGTGAAAATTGGAGCGAAT+GGG | - | chr3.3:79862324-79862343 | MS.gene049276:intron | 45.0% | |
| TGGCATGACAGGGTGAAAAT+TGG | - | chr3.3:79862314-79862333 | MS.gene049276:intron | 45.0% | |
| ! | AACAGCGATGATGATGACAG+TGG | - | chr3.3:79862409-79862428 | MS.gene049276:CDS | 45.0% |
| !! | AATTTAATATATTGAATATA+TGG | - | chr3.3:79861726-79861745 | MS.gene049276:CDS | 5.0% |
| GCATCATGCATGGCATGACA+GGG | - | chr3.3:79862304-79862323 | MS.gene049276:intron | 50.0% | |
| GGAGTTGGATGATGACATGG+AGG | - | chr3.3:79862471-79862490 | MS.gene049276:CDS | 50.0% | |
| GTTGGAGAGAAGACAAACCC+AGG | + | chr3.3:79861415-79861434 | None:intergenic | 50.0% | |
| TGCATCATGCATGGCATGAC+AGG | - | chr3.3:79862303-79862322 | MS.gene049276:intron | 50.0% | |
| !! | ACAGATAAGGCATTGTGCGG+TGG | - | chr3.3:79861911-79861930 | MS.gene049276:CDS | 50.0% |
| !! | TCAGGCACTGACCAGAAAGT+GGG | - | chr3.3:79862031-79862050 | MS.gene049276:intron | 50.0% |
| !! | TTCAGGCACTGACCAGAAAG+TGG | - | chr3.3:79862030-79862049 | MS.gene049276:intron | 50.0% |
| GGAGAGAAGACAAACCCAGG+AGG | + | chr3.3:79861412-79861431 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 79861388 | 79862513 | 79861388 | ID=MS.gene049276 |
| chr3.3 | mRNA | 79861388 | 79862513 | 79861388 | ID=MS.gene049276.t1;Parent=MS.gene049276 |
| chr3.3 | exon | 79862354 | 79862513 | 79862354 | ID=MS.gene049276.t1.exon1;Parent=MS.gene049276.t1 |
| chr3.3 | CDS | 79862354 | 79862513 | 79862354 | ID=cds.MS.gene049276.t1;Parent=MS.gene049276.t1 |
| chr3.3 | exon | 79861715 | 79861986 | 79861715 | ID=MS.gene049276.t1.exon2;Parent=MS.gene049276.t1 |
| chr3.3 | CDS | 79861715 | 79861986 | 79861715 | ID=cds.MS.gene049276.t1;Parent=MS.gene049276.t1 |
| chr3.3 | exon | 79861388 | 79861576 | 79861388 | ID=MS.gene049276.t1.exon3;Parent=MS.gene049276.t1 |
| chr3.3 | CDS | 79861388 | 79861576 | 79861388 | ID=cds.MS.gene049276.t1;Parent=MS.gene049276.t1 |
| Gene Sequence |
| Protein sequence |
