AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene049291

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene049291.t1 MTR_3g096140 92.778 360 23 1 1 360 1 357 0.0 691
MS.gene049291.t1 MTR_3g096140 92.330 339 23 1 22 360 1 336 0.0 647
MS.gene049291.t1 MTR_3g096140 95.604 273 12 0 1 273 1 273 0.0 545
MS.gene049291.t1 MTR_8g063550 65.106 235 76 3 1 235 1 229 1.14e-106 316
MS.gene049291.t1 MTR_8g063550 65.106 235 76 3 1 235 1 229 2.86e-106 319
MS.gene049291.t1 MTR_8g063550 65.106 235 76 3 1 235 1 229 8.93e-106 317
MS.gene049291.t1 MTR_8g093580 64.255 235 78 3 1 235 1 229 1.12e-105 319
MS.gene049291.t1 MTR_1g090723 54.359 195 82 3 9 201 10 199 1.79e-68 226
MS.gene049291.t1 MTR_0036s0150 57.143 175 73 2 9 182 7 180 2.04e-68 224
MS.gene049291.t1 MTR_1g097300 50.754 199 93 1 1 194 13 211 5.64e-68 224
MS.gene049291.t1 MTR_1g090723 54.872 195 80 4 9 201 10 198 1.13e-67 223
MS.gene049291.t1 MTR_1g090723 54.872 195 80 4 9 201 10 198 1.55e-67 224
MS.gene049291.t1 MTR_1g090720 56.742 178 70 2 7 178 42 218 3.48e-63 209
MS.gene049291.t1 MTR_6g477900 57.616 151 64 0 9 159 8 158 1.04e-60 195
MS.gene049291.t1 MTR_3g064580 55.215 163 69 3 9 168 8 169 9.80e-57 196
MS.gene049291.t1 MTR_5g076850 53.704 162 74 1 9 169 8 169 1.02e-56 195
MS.gene049291.t1 MTR_2g064090 55.333 150 66 1 9 157 8 157 5.50e-56 186
MS.gene049291.t1 MTR_4g108760 51.592 157 72 2 9 163 19 173 1.89e-50 172
MS.gene049291.t1 MTR_5g069030 39.453 256 144 5 10 259 28 278 3.54e-50 177
MS.gene049291.t1 MTR_4g036030 51.656 151 68 3 9 157 9 156 5.92e-50 171
MS.gene049291.t1 MTR_3g093050 43.961 207 96 3 10 209 25 218 7.96e-50 176
MS.gene049291.t1 MTR_3g093050 43.961 207 96 3 10 209 25 218 1.50e-49 176
MS.gene049291.t1 MTR_2g062730 51.974 152 69 3 9 158 12 161 1.68e-49 169
MS.gene049291.t1 MTR_3g435150 51.250 160 74 2 6 163 15 172 2.68e-49 168
MS.gene049291.t1 MTR_1g096430 49.686 159 75 3 9 165 9 164 3.25e-49 169
MS.gene049291.t1 MTR_8g076110 41.346 208 109 5 9 214 8 204 5.16e-49 167
MS.gene049291.t1 MTR_3g088110 49.383 162 76 3 1 159 1 159 6.30e-49 166
MS.gene049291.t1 MTR_5g014300 46.286 175 84 2 9 176 8 179 7.15e-49 167
MS.gene049291.t1 MTR_2g078700 53.165 158 66 4 9 161 25 179 3.21e-48 167
MS.gene049291.t1 MTR_4g098630 39.474 228 114 4 9 212 8 235 3.88e-48 165
MS.gene049291.t1 MTR_5g021710 49.669 151 71 3 9 157 10 157 6.34e-48 166
MS.gene049291.t1 MTR_6g084430 51.678 149 68 2 9 157 7 151 1.06e-47 164
MS.gene049291.t1 MTR_4g035590 50.331 151 71 2 9 158 10 157 1.23e-47 165
MS.gene049291.t1 MTR_2g079990 47.651 149 76 1 9 157 18 164 1.52e-47 165
MS.gene049291.t1 MTR_4g101680 50.993 151 69 3 9 157 9 156 2.00e-47 164
MS.gene049291.t1 MTR_3g093040 48.649 148 76 0 10 157 111 258 2.80e-47 163
MS.gene049291.t1 MTR_7g085220 45.062 162 74 3 9 157 10 169 5.80e-47 163
MS.gene049291.t1 MTR_2g086880 42.246 187 95 3 7 188 18 196 6.62e-47 167
MS.gene049291.t1 MTR_7g085260 51.282 156 66 4 9 157 19 171 7.47e-47 164
MS.gene049291.t1 MTR_2g086880 49.324 148 67 2 7 154 18 157 8.59e-47 167
MS.gene049291.t1 MTR_6g012670 46.154 169 83 3 9 173 22 186 1.81e-46 161
MS.gene049291.t1 MTR_3g109340 49.045 157 75 3 9 163 24 177 1.77e-45 159
MS.gene049291.t1 MTR_8g467490 45.732 164 76 4 5 157 12 173 1.89e-45 160
MS.gene049291.t1 MTR_7g100990 32.955 264 142 6 9 266 13 247 2.63e-45 158
MS.gene049291.t1 MTR_3g070030 44.068 177 93 3 1 173 12 186 3.25e-45 158
MS.gene049291.t1 MTR_3g109340 48.408 157 75 3 9 163 24 176 5.80e-45 158
MS.gene049291.t1 MTR_6g011860 45.963 161 75 4 7 157 15 173 8.24e-45 158
MS.gene049291.t1 MTR_2157s0010 42.857 168 82 3 7 162 8 173 1.01e-44 155
MS.gene049291.t1 MTR_5g041940 47.403 154 75 2 9 158 5 156 2.30e-44 154
MS.gene049291.t1 MTR_2g080010 45.062 162 74 4 9 157 17 176 4.20e-44 155
MS.gene049291.t1 MTR_4g134460 45.570 158 81 3 3 159 50 203 5.78e-44 157
MS.gene049291.t1 MTR_5g012080 46.405 153 75 5 9 157 9 158 9.34e-44 154
MS.gene049291.t1 MTR_7g011130 43.503 177 82 4 10 170 22 196 1.22e-43 154
MS.gene049291.t1 MTR_4g081870 44.586 157 81 3 9 161 11 165 1.83e-43 152
MS.gene049291.t1 MTR_5g040420 44.172 163 79 4 5 157 12 172 2.97e-43 154
MS.gene049291.t1 MTR_8g059170 47.020 151 76 2 9 157 16 164 3.54e-43 152
MS.gene049291.t1 MTR_7g005280 47.561 164 71 5 9 167 17 170 5.24e-43 150
MS.gene049291.t1 MTR_7g011120 35.521 259 139 6 10 256 11 253 6.70e-43 151
MS.gene049291.t1 MTR_4g089135 43.182 176 73 4 7 157 15 188 9.03e-43 152
MS.gene049291.t1 MTR_2g093810 47.097 155 74 4 9 157 16 168 9.46e-43 151
MS.gene049291.t1 MTR_4g075980 45.000 160 78 4 1 157 9 161 1.75e-42 150
MS.gene049291.t1 MTR_2g079990 49.265 136 67 1 9 144 18 151 2.16e-42 152
MS.gene049291.t1 MTR_1g008740 48.701 154 73 4 9 159 15 165 2.31e-42 151
MS.gene049291.t1 MTR_8g094580 45.806 155 77 3 9 159 9 160 2.47e-42 149
MS.gene049291.t1 MTR_1g008740 48.701 154 73 4 9 159 29 179 3.21e-42 151
MS.gene049291.t1 MTR_6g032770 46.405 153 74 4 10 157 21 170 4.16e-42 151
MS.gene049291.t1 MTR_8g024480 43.125 160 81 2 9 158 17 176 4.18e-42 152
MS.gene049291.t1 MTR_3g096920 46.104 154 77 3 9 159 9 159 2.03e-41 147
MS.gene049291.t1 MTR_2g064470 47.531 162 71 5 1 157 6 158 2.86e-41 147
MS.gene049291.t1 MTR_3g070040 43.636 165 83 4 11 170 12 171 1.93e-39 143
MS.gene049291.t1 MTR_1g069805 45.033 151 75 3 9 157 12 156 2.08e-39 141
MS.gene049291.t1 MTR_7g097090 44.667 150 75 3 9 156 12 155 1.12e-37 137
MS.gene049291.t1 MTR_5g090970 40.719 167 85 3 3 157 14 178 1.69e-37 137
MS.gene049291.t1 MTR_8g023840 47.297 148 69 5 10 154 14 155 2.29e-37 139
MS.gene049291.t1 MTR_2g068880 41.212 165 81 3 8 157 23 186 4.21e-37 136
MS.gene049291.t1 MTR_5g090970 40.120 167 85 3 3 157 14 177 4.33e-37 136
MS.gene049291.t1 MTR_3g096920 46.575 146 73 3 9 154 9 149 5.39e-37 136
MS.gene049291.t1 MTR_8g099750 41.071 168 84 4 9 169 16 175 8.74e-37 133
MS.gene049291.t1 MTR_3g116070 45.926 135 68 3 9 140 25 157 1.76e-36 135
MS.gene049291.t1 MTR_8g023860 43.624 149 75 5 10 155 15 157 9.99e-36 135
MS.gene049291.t1 MTR_2g068920 40.606 165 82 4 8 157 22 185 4.27e-35 130
MS.gene049291.t1 MTR_8g023900 43.709 151 78 5 10 157 15 161 7.83e-35 133
MS.gene049291.t1 MTR_8g023900 43.226 155 79 5 6 157 192 340 4.20e-34 131
MS.gene049291.t1 MTR_3g098810 40.719 167 85 3 9 165 16 178 3.63e-34 126
MS.gene049291.t1 MTR_8g023930 42.384 151 78 5 10 157 27 171 1.14e-33 130
MS.gene049291.t1 MTR_3g098810 45.385 130 63 2 9 134 16 141 2.73e-31 117
MS.gene049291.t1 MTR_4g052620 38.217 157 90 5 6 155 4 160 4.64e-30 116
MS.gene049291.t1 MTR_2g086690 39.355 155 86 6 9 155 6 160 4.96e-30 115
MS.gene049291.t1 MTR_7g105170 33.036 224 127 9 7 211 4 223 4.19e-29 113
MS.gene049291.t1 MTR_8g023880 40.462 173 75 8 3 157 2 164 2.11e-28 112
MS.gene049291.t1 MTR_4g094302 38.125 160 77 6 9 158 13 160 1.38e-26 104
MS.gene049291.t1 MTR_8g094580 44.660 103 52 2 61 159 5 106 4.43e-25 102
MS.gene049291.t1 MTR_4g094302 42.308 130 59 6 9 134 13 130 1.84e-24 98.2
MS.gene049291.t1 MTR_8g093790 36.250 160 76 7 9 166 12 147 3.51e-20 87.4
MS.gene049291.t1 MTR_3g096400 33.516 182 98 8 1 168 1 173 5.76e-19 84.7
MS.gene049291.t1 MTR_7g070140 48.750 80 39 1 57 134 12 91 3.00e-18 80.5
MS.gene049291.t1 MTR_7g083330 29.851 134 89 4 1 132 11 141 2.97e-14 70.9
MS.gene049291.t1 MTR_7g083360 28.082 146 101 3 10 154 13 155 7.03e-14 68.9
MS.gene049291.t1 MTR_1g087190 60.870 46 17 1 9 53 7 52 3.21e-13 63.9
MS.gene049291.t1 MTR_7g070150 53.704 54 22 2 104 157 7 57 6.30e-12 61.6
MS.gene049291.t1 MTR_7g116460 34.194 155 84 10 13 157 11 157 1.05e-11 63.9
MS.gene049291.t1 MTR_7g083370 30.000 130 75 4 10 132 13 133 8.63e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene049291.t1 AT5G09330 47.866 328 135 9 1 305 1 315 4.10e-91 281
MS.gene049291.t1 AT5G09330 47.866 328 135 9 1 305 1 315 4.10e-91 281
MS.gene049291.t1 AT5G09330 47.866 328 135 9 1 305 1 315 4.10e-91 281
MS.gene049291.t1 AT5G09330 47.866 328 135 9 1 305 1 315 4.10e-91 281
MS.gene049291.t1 AT5G09330 47.866 328 135 9 1 305 1 315 4.10e-91 281
MS.gene049291.t1 AT5G64060 55.042 238 99 3 1 238 1 230 6.67e-88 269
MS.gene049291.t1 AT5G04410 61.538 182 69 1 7 188 9 189 1.02e-78 252
MS.gene049291.t1 AT3G10500 63.253 166 61 0 7 172 9 174 1.78e-74 240
MS.gene049291.t1 AT1G34190 47.867 211 109 1 5 215 14 223 1.15e-67 223
MS.gene049291.t1 AT3G10480 56.725 171 73 1 7 177 27 196 8.30e-65 212
MS.gene049291.t1 AT3G10480 56.977 172 72 2 7 177 27 197 1.32e-64 212
MS.gene049291.t1 AT3G10490 55.114 176 77 2 7 181 27 201 3.30e-64 204
MS.gene049291.t1 AT3G10490 55.114 176 77 2 7 181 27 201 5.38e-63 207
MS.gene049291.t1 AT1G34180 50.267 187 92 1 5 190 14 200 1.25e-62 207
MS.gene049291.t1 AT1G34180 50.267 187 92 1 5 190 14 200 1.00e-61 207
MS.gene049291.t1 AT3G17730 58.278 151 63 0 9 159 8 158 2.61e-60 194
MS.gene049291.t1 AT1G34180 47.236 199 92 2 5 190 14 212 1.82e-59 199
MS.gene049291.t1 AT3G10480 48.293 205 71 3 7 177 27 230 3.07e-59 200
MS.gene049291.t1 AT1G65910 52.273 176 83 1 7 181 6 181 1.07e-58 201
MS.gene049291.t1 AT1G34180 47.236 199 92 2 5 190 14 212 1.31e-58 199
MS.gene049291.t1 AT1G33060 54.054 148 68 0 10 157 27 174 1.51e-54 189
MS.gene049291.t1 AT1G33060 54.054 148 68 0 10 157 27 174 1.62e-54 189
MS.gene049291.t1 AT3G03200 55.333 150 66 1 9 157 8 157 6.28e-54 184
MS.gene049291.t1 AT5G24590 46.860 207 92 5 10 215 16 205 1.13e-53 183
MS.gene049291.t1 AT5G17260 52.667 150 70 1 9 157 8 157 8.21e-53 182
MS.gene049291.t1 AT2G27300 53.378 148 61 2 7 154 14 153 1.17e-52 177
MS.gene049291.t1 AT3G49530 51.333 150 72 1 10 158 16 165 3.65e-51 176
MS.gene049291.t1 AT4G35580 54.054 148 68 0 10 157 12 159 4.07e-51 178
MS.gene049291.t1 AT1G54330 52.903 155 70 1 9 163 8 159 4.38e-51 172
MS.gene049291.t1 AT4G35580 54.054 148 68 0 10 157 12 159 4.89e-51 178
MS.gene049291.t1 AT4G35580 54.054 148 68 0 10 157 12 159 5.02e-51 178
MS.gene049291.t1 AT4G17980 51.266 158 73 2 4 157 3 160 5.65e-51 171
MS.gene049291.t1 AT5G61430 52.866 157 70 2 9 163 18 172 7.16e-51 173
MS.gene049291.t1 AT4G17980 51.266 158 73 2 4 157 3 160 1.12e-50 171
MS.gene049291.t1 AT3G49530 51.333 150 72 1 10 158 16 165 1.29e-50 176
MS.gene049291.t1 AT5G22290 47.126 174 76 3 3 167 17 183 1.33e-50 172
MS.gene049291.t1 AT5G39610 54.430 158 66 3 9 163 22 176 1.85e-50 170
MS.gene049291.t1 AT5G46590 49.359 156 77 2 4 157 3 158 1.19e-49 168
MS.gene049291.t1 AT1G71930 48.734 158 78 2 7 163 9 164 2.97e-49 168
MS.gene049291.t1 AT1G71930 48.734 158 78 2 7 163 9 164 2.97e-49 168
MS.gene049291.t1 AT4G10350 50.331 151 74 1 9 158 11 161 3.89e-49 169
MS.gene049291.t1 AT3G44290 51.020 147 64 2 8 154 15 153 6.79e-49 164
MS.gene049291.t1 AT5G07680 51.592 157 72 2 9 163 5 159 8.70e-49 167
MS.gene049291.t1 AT3G18400 51.678 149 69 2 9 157 7 152 9.33e-49 167
MS.gene049291.t1 AT1G32870 51.786 168 77 2 7 172 10 175 1.03e-48 172
MS.gene049291.t1 AT5G07680 51.592 157 72 2 9 163 19 173 1.18e-48 167
MS.gene049291.t1 AT1G32870 51.786 168 77 2 7 172 10 175 1.23e-48 172
MS.gene049291.t1 AT1G12260 47.561 164 77 4 9 168 9 167 1.63e-48 167
MS.gene049291.t1 AT1G12260 47.561 164 77 4 9 168 9 167 2.53e-48 168
MS.gene049291.t1 AT1G32870 51.786 168 77 2 7 172 46 211 3.18e-48 171
MS.gene049291.t1 AT3G44290 51.370 146 63 2 9 154 16 153 5.66e-48 165
MS.gene049291.t1 AT2G18060 41.500 200 104 4 9 206 11 199 6.25e-48 166
MS.gene049291.t1 AT2G18060 41.500 200 104 4 9 206 11 199 6.25e-48 166
MS.gene049291.t1 AT5G18270 44.811 212 105 6 9 215 23 227 6.63e-48 165
MS.gene049291.t1 AT5G46590 52.174 138 65 1 4 140 3 140 1.17e-47 163
MS.gene049291.t1 AT1G01720 46.746 169 83 3 1 165 1 166 1.85e-47 162
MS.gene049291.t1 AT5G18270 44.340 212 106 6 9 215 23 227 1.93e-47 164
MS.gene049291.t1 AT1G33280 49.669 151 72 2 9 158 10 157 2.11e-47 163
MS.gene049291.t1 AT2G24430 50.318 157 73 3 3 157 12 165 3.32e-47 163
MS.gene049291.t1 AT2G24430 50.318 157 73 3 3 157 12 165 3.32e-47 163
MS.gene049291.t1 AT1G77450 48.701 154 73 3 9 159 12 162 3.60e-47 160
MS.gene049291.t1 AT3G29035 49.697 165 79 2 9 171 26 188 5.50e-47 162
MS.gene049291.t1 AT1G62700 48.701 154 70 4 9 158 9 157 7.51e-47 164
MS.gene049291.t1 AT1G62700 48.701 154 70 4 9 158 9 157 7.51e-47 164
MS.gene049291.t1 AT4G36160 48.026 152 74 3 9 158 12 160 1.40e-46 163
MS.gene049291.t1 AT4G36160 48.026 152 74 3 9 158 12 160 1.40e-46 163
MS.gene049291.t1 AT4G36160 48.026 152 74 3 9 158 16 164 1.50e-46 163
MS.gene049291.t1 AT1G69490 38.756 209 110 3 9 201 11 217 2.06e-46 159
MS.gene049291.t1 AT4G27410 46.980 149 77 1 9 157 16 162 2.88e-46 160
MS.gene049291.t1 AT1G52890 47.333 150 77 1 9 158 16 163 3.53e-46 160
MS.gene049291.t1 AT3G15170 48.765 162 77 3 6 163 19 178 7.11e-46 159
MS.gene049291.t1 AT3G15500 46.667 150 78 1 9 158 16 163 9.23e-46 159
MS.gene049291.t1 AT5G53950 50.311 161 72 4 2 157 12 169 2.96e-45 159
MS.gene049291.t1 AT5G08790 46.626 163 78 4 3 159 2 161 3.24e-45 157
MS.gene049291.t1 AT1G56010 45.506 178 90 4 1 174 14 188 3.36e-45 158
MS.gene049291.t1 AT3G04060 49.677 155 73 3 9 160 22 174 6.46e-45 157
MS.gene049291.t1 AT1G79580 48.026 152 74 3 9 158 19 167 7.04e-45 158
MS.gene049291.t1 AT1G79580 48.026 152 74 3 9 158 19 167 7.04e-45 158
MS.gene049291.t1 AT1G79580 48.026 152 74 3 9 158 19 167 7.04e-45 158
MS.gene049291.t1 AT1G79580 48.026 152 74 3 9 158 19 167 7.04e-45 158
MS.gene049291.t1 AT1G79580 48.026 152 74 3 9 158 19 167 7.04e-45 158
MS.gene049291.t1 AT1G32510 45.000 160 80 2 6 157 5 164 1.96e-44 154
MS.gene049291.t1 AT5G62380 48.684 152 73 3 9 158 9 157 2.86e-44 156
MS.gene049291.t1 AT5G62380 48.684 152 73 3 9 158 9 157 2.86e-44 156
MS.gene049291.t1 AT5G66300 45.181 166 85 4 9 171 14 176 3.99e-44 154
MS.gene049291.t1 AT3G12977 46.753 154 79 2 9 161 20 171 1.44e-43 152
MS.gene049291.t1 AT1G61110 47.531 162 70 4 9 157 18 177 2.66e-43 152
MS.gene049291.t1 AT2G02450 44.516 155 81 3 6 159 50 200 3.91e-43 154
MS.gene049291.t1 AT3G04070 44.099 161 76 3 9 157 12 170 4.53e-43 152
MS.gene049291.t1 AT2G02450 44.516 155 81 3 6 159 50 200 4.69e-43 154
MS.gene049291.t1 AT4G27410 40.462 173 88 1 9 166 16 188 9.75e-43 151
MS.gene049291.t1 AT5G39820 42.857 175 75 5 6 157 19 191 9.83e-43 152
MS.gene049291.t1 AT1G26870 44.785 163 77 4 6 157 15 175 1.37e-42 153
MS.gene049291.t1 AT5G13180 48.125 160 71 4 9 164 16 167 2.31e-42 148
MS.gene049291.t1 AT1G76420 48.366 153 74 3 9 159 24 173 3.30e-42 150
MS.gene049291.t1 AT3G15510 43.069 202 89 9 11 198 21 210 3.34e-42 151
MS.gene049291.t1 AT5G63790 44.785 163 81 4 3 159 45 204 6.11e-42 149
MS.gene049291.t1 AT5G63790 44.785 163 81 4 3 159 55 214 7.75e-42 149
MS.gene049291.t1 AT3G04070 35.507 276 156 7 9 277 12 272 8.70e-42 150
MS.gene049291.t1 AT2G33480 51.634 153 63 4 9 158 17 161 1.82e-41 146
MS.gene049291.t1 AT2G17040 44.444 153 75 4 8 157 7 152 3.07e-41 146
MS.gene049291.t1 AT2G33480 50.000 152 65 3 9 158 17 159 3.90e-41 145
MS.gene049291.t1 AT2G43000 42.949 156 86 2 3 157 14 167 2.80e-40 143
MS.gene049291.t1 AT1G32770 41.975 162 83 2 9 159 18 179 3.76e-40 145
MS.gene049291.t1 AT3G61910 43.636 165 75 4 9 157 13 175 8.76e-40 144
MS.gene049291.t1 AT2G46770 40.964 166 80 3 9 158 18 181 2.28e-39 143
MS.gene049291.t1 AT1G52880 45.283 159 73 4 11 157 21 177 1.05e-38 140
MS.gene049291.t1 AT5G04395 43.452 168 77 4 2 155 24 187 1.91e-36 130
MS.gene049291.t1 AT4G28530 43.114 167 71 4 9 157 12 172 5.87e-36 134
MS.gene049291.t1 AT3G12910 38.953 172 85 4 3 157 17 185 3.71e-34 128
MS.gene049291.t1 AT5G61430 55.046 109 47 1 57 163 1 109 7.67e-34 126
MS.gene049291.t1 AT1G56010 47.863 117 58 1 61 174 5 121 1.48e-30 117
MS.gene049291.t1 AT3G12977 49.524 105 52 1 59 162 15 119 1.69e-30 116
MS.gene049291.t1 AT4G10350 50.526 95 47 0 64 158 20 114 1.24e-29 115
MS.gene049291.t1 AT3G10490 53.922 102 45 2 81 181 1 101 4.17e-29 115
MS.gene049291.t1 AT3G10490 53.922 102 45 2 81 181 1 101 4.17e-29 115
MS.gene049291.t1 AT4G01520 40.000 155 79 5 10 157 7 154 5.61e-29 114
MS.gene049291.t1 AT4G01550 40.698 172 83 7 10 171 7 169 1.26e-28 115
MS.gene049291.t1 AT5G22380 38.217 157 90 5 10 159 8 164 2.11e-28 111
MS.gene049291.t1 AT4G01540 40.000 155 79 5 10 157 7 154 4.19e-28 114
MS.gene049291.t1 AT3G44350 38.710 155 90 5 10 159 8 162 5.30e-28 110
MS.gene049291.t1 AT4G01540 40.000 155 79 5 10 157 7 154 6.39e-28 113
MS.gene049291.t1 AT4G01540 40.000 155 79 5 10 157 7 154 6.50e-28 113
MS.gene049291.t1 AT4G01540 40.000 155 79 5 10 157 7 154 6.80e-28 114
MS.gene049291.t1 AT1G02230 40.127 157 77 6 6 154 1 148 2.46e-25 105
MS.gene049291.t1 AT3G44350 37.908 153 90 5 10 157 8 160 2.75e-25 100
MS.gene049291.t1 AT3G04420 37.333 150 87 2 10 157 6 150 2.52e-24 101
MS.gene049291.t1 AT3G04420 37.333 150 87 2 10 157 6 150 6.94e-24 101
MS.gene049291.t1 AT2G33480 49.524 105 49 3 57 158 1 104 1.43e-23 97.4
MS.gene049291.t1 AT1G02250 38.816 152 77 5 10 154 6 148 1.12e-21 95.1
MS.gene049291.t1 AT5G64530 35.329 167 74 7 9 157 5 155 1.23e-20 88.6
MS.gene049291.t1 AT5G64530 40.909 132 58 6 9 136 5 120 6.42e-20 85.9
MS.gene049291.t1 AT1G01010 38.608 158 74 7 10 154 6 153 6.50e-20 90.9
MS.gene049291.t1 AT1G02220 35.294 153 79 5 10 155 6 145 1.12e-19 89.7
MS.gene049291.t1 AT2G18060 36.364 121 65 3 87 206 2 111 3.13e-19 87.0
MS.gene049291.t1 AT4G28530 38.281 128 59 3 9 118 12 137 4.68e-19 87.0
MS.gene049291.t1 AT5G22290 42.222 90 37 2 87 167 1 84 8.35e-18 82.0
MS.gene049291.t1 AT2G43000 39.080 87 52 1 72 157 3 89 2.26e-15 74.3
MS.gene049291.t1 AT3G56530 30.263 152 95 4 9 155 54 199 2.43e-14 73.6
MS.gene049291.t1 AT5G14000 33.071 127 79 3 10 134 18 140 1.69e-12 65.1
MS.gene049291.t1 AT5G14000 33.071 127 79 3 10 134 18 140 3.76e-12 65.5
MS.gene049291.t1 AT3G55210 25.904 166 99 6 6 155 10 167 3.42e-11 63.5
MS.gene049291.t1 AT1G28470 30.939 181 99 9 10 173 80 251 3.56e-11 63.9
MS.gene049291.t1 AT3G04430 30.435 138 72 6 13 133 6 136 4.40e-11 62.0

Find 109 sgRNAs with CRISPR-Local

Find 326 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCCAGTCTTTCTCATTAAA+TGG 0.189856 3.3:-79709171 None:intergenic
TGTCATTTACTTCAGAAATA+TGG 0.230925 3.3:-79709275 None:intergenic
TCCATACTGTGCACCATTCC+TGG 0.233076 3.3:-79709145 None:intergenic
ATCTCATTTGGAATTAAATA+AGG 0.245537 3.3:-79711219 None:intergenic
CAATCAGTTCGGTCTCCTTT+AGG 0.274643 3.3:-79707829 None:intergenic
GTGCAATATTTCTTTCCAAC+AGG 0.361824 3.3:-79707679 None:intergenic
TCAAGCAACTCAAAGAAATC+AGG 0.367048 3.3:-79711375 None:intergenic
GGTGCAGACACAGCAGCAAC+AGG 0.376155 3.3:-79709228 None:intergenic
GAAACAAAATTGATGATTCC+AGG 0.377486 3.3:+79707364 MS.gene049291:CDS
TGTTTAGTCTGCCAGGATAA+TGG 0.379048 3.3:-79711408 None:intergenic
CCCAGGAATGGTGCACAGTA+TGG 0.387270 3.3:+79709144 MS.gene049291:CDS
AGAACTCCTATGTGATTTGT+AGG 0.387741 3.3:+79709097 MS.gene049291:intron
AACCATTTAATGAGAAAGAC+TGG 0.390374 3.3:+79709169 MS.gene049291:CDS
AGTTCAGCAATGACATGAAA+AGG 0.397881 3.3:-79707460 None:intergenic
CCCTCTGCAAGTGGATGTAT+TGG 0.400344 3.3:+79709303 MS.gene049291:CDS
GCACGGGAGGGAGGATGAAT+CGG 0.411671 3.3:+79707698 MS.gene049291:CDS
TATTAACAGCTTGGTTGGAT+TGG 0.414108 3.3:+79711260 MS.gene049291:CDS
CCATACTGTGCACCATTCCT+GGG 0.415740 3.3:-79709144 None:intergenic
GGAGATATTAACAGCTTGGT+TGG 0.445872 3.3:+79711255 MS.gene049291:CDS
GACGATGAAAATGCATTGGC+CGG 0.464243 3.3:+79709435 MS.gene049291:CDS
ACCTAGAGGTGCCATTATCC+TGG 0.465437 3.3:+79711397 MS.gene049291:CDS
ATGAATCGGGCAACAGAAGT+AGG 0.466475 3.3:+79707712 MS.gene049291:CDS
CTAAAGGAGACCGAACTGAT+TGG 0.467195 3.3:+79707830 MS.gene049291:CDS
TGGTACTTCTTTACCCCTGT+TGG 0.468244 3.3:+79707664 MS.gene049291:CDS
GCCATCATGTTTAGTCTGCC+AGG 0.468396 3.3:-79711415 None:intergenic
ATAAACGAAAAGCTATTTGC+TGG 0.469573 3.3:+79711327 MS.gene049291:CDS
AAAAGGAAGGTCCTGGTCCC+AGG 0.470057 3.3:+79709127 MS.gene049291:CDS
TAAAGGAGACCGAACTGATT+GGG 0.479184 3.3:+79707831 MS.gene049291:CDS
CACGGGAGGGAGGATGAATC+GGG 0.479266 3.3:+79707699 MS.gene049291:CDS
CTTTGAGTTGCTTGACCTAG+AGG 0.489029 3.3:+79711383 MS.gene049291:CDS
CGACAGAAGGTTGATAATCC+TGG 0.495670 3.3:+79711171 MS.gene049291:intron
ACGACACACCCTTCAGCTCT+AGG 0.498439 3.3:+79709369 MS.gene049291:CDS
TCAGCGTTGTTTGCTTGACC+AGG 0.500954 3.3:-79711189 None:intergenic
CATTTACAAGTATGCTCCAT+GGG 0.502977 3.3:+79707486 MS.gene049291:CDS
TCACCCCACTGATGTTGAGC+TGG 0.506550 3.3:+79707396 MS.gene049291:CDS
CTATCAAGATTGATGCCCTC+TGG 0.507191 3.3:+79709345 MS.gene049291:CDS
CACACTGGCAAAGCTCCTAA+AGG 0.508822 3.3:+79707814 MS.gene049291:CDS
GGGCAACAGAAGTAGGGTAC+TGG 0.511584 3.3:+79707719 MS.gene049291:CDS
GTAGGGTACTGGAAGACTAC+AGG 0.511858 3.3:+79707730 MS.gene049291:CDS
GCTTGATTGCCTAGAGCTGA+AGG 0.517653 3.3:-79709378 None:intergenic
CTTTGCCAGTGTGAAACACC+AGG 0.519578 3.3:-79707804 None:intergenic
GTTCAGCAATGACATGAAAA+GGG 0.521712 3.3:-79707459 None:intergenic
CCTGGGAGATATTAACAGCT+TGG 0.523071 3.3:+79711251 MS.gene049291:CDS
GTGGAACACCATTGTCAGCT+AGG 0.523981 3.3:-79707885 None:intergenic
GATTTGTAGGGTATTTCAAA+AGG 0.527496 3.3:+79709110 MS.gene049291:CDS
AGCTTGGTTGGATTGGATGA+TGG 0.527918 3.3:+79711267 MS.gene049291:CDS
TGTAGGGTATTTCAAAAGGA+AGG 0.527921 3.3:+79709114 MS.gene049291:CDS
TCCAATACATCCACTTGCAG+AGG 0.532823 3.3:-79709304 None:intergenic
TTTCGACGATGAAAATGCAT+TGG 0.532966 3.3:+79709431 MS.gene049291:CDS
ATCGTCGAAAATAGCAAGCA+TGG 0.533664 3.3:-79709418 None:intergenic
CATGCATAACCCAATCAGTT+CGG 0.542397 3.3:-79707840 None:intergenic
CAAGCAACTCAAAGAAATCA+GGG 0.542667 3.3:-79711374 None:intergenic
AGCTGACAATGGTGTTCCAC+AGG 0.546378 3.3:+79707888 MS.gene049291:CDS
AGAAATATTGCACGGGAGGG+AGG 0.549227 3.3:+79707689 MS.gene049291:CDS
TCTTGATAGACATGATAAAG+AGG 0.553266 3.3:-79709331 None:intergenic
TCCAAACCTGGTAGATCCCA+TGG 0.553951 3.3:-79707502 None:intergenic
AAACAAAATTGATGATTCCA+GGG 0.554783 3.3:+79707365 MS.gene049291:CDS
GAACATAAGAATCAAGTGGT+GGG 0.560868 3.3:+79707769 MS.gene049291:CDS
TGCAATATTTCTTTCCAACA+GGG 0.561122 3.3:-79707678 None:intergenic
GAAGGTCCTGGTCCCAGGAA+TGG 0.561485 3.3:+79709132 MS.gene049291:CDS
TCAGAAATATGGCTTGAGCT+AGG 0.568979 3.3:-79709264 None:intergenic
GATAAATCTTTGCTCAAGAG+TGG 0.570392 3.3:+79707631 MS.gene049291:intron
GTTGGATTGGATGATGGAAG+CGG 0.572350 3.3:+79711273 MS.gene049291:CDS
GGAAGACTACAGGGAAGGAT+AGG 0.572952 3.3:+79707740 MS.gene049291:CDS
ACATTTACAAGTATGCTCCA+TGG 0.574983 3.3:+79707485 MS.gene049291:CDS
ACGATGAAAATGCATTGGCC+GGG 0.583391 3.3:+79709436 MS.gene049291:CDS
GTATTTCAAAAGGAAGGTCC+TGG 0.583445 3.3:+79709120 MS.gene049291:CDS
GAACTCCTATGTGATTTGTA+GGG 0.583857 3.3:+79709098 MS.gene049291:intron
TGAAGGGTGTGTCGTGCCAG+AGG 0.584025 3.3:-79709361 None:intergenic
AACATAAGAATCAAGTGGTG+GGG 0.590194 3.3:+79707770 MS.gene049291:CDS
GAAGGGTGTGTCGTGCCAGA+GGG 0.592236 3.3:-79709360 None:intergenic
TGAATCGGGCAACAGAAGTA+GGG 0.592463 3.3:+79707713 MS.gene049291:CDS
GGTCAAGCAAACAACGCTGA+AGG 0.593547 3.3:+79711192 MS.gene049291:CDS
ATTACCAGCTCAACATCAGT+GGG 0.596276 3.3:-79707400 None:intergenic
GGAAAGAAATATTGCACGGG+AGG 0.596853 3.3:+79707685 MS.gene049291:CDS
GACATGCATCCCTCTGCAAG+TGG 0.596887 3.3:+79709294 MS.gene049291:CDS
AGAACCCTGGTGTTTCACAC+TGG 0.601634 3.3:+79707799 MS.gene049291:CDS
GCCAGGATAATGGCACCTCT+AGG 0.602723 3.3:-79711398 None:intergenic
TGTGCACCATTCCTGGGACC+AGG 0.603992 3.3:-79709138 None:intergenic
GTGGGGTGAAAACGAAACCC+TGG 0.604367 3.3:-79707382 None:intergenic
CATTACCAGCTCAACATCAG+TGG 0.606060 3.3:-79707401 None:intergenic
AGCAACTCAAAGAAATCAGG+GGG 0.608948 3.3:-79711372 None:intergenic
TCCTGGCAGACTAAACATGA+TGG 0.610442 3.3:+79711414 MS.gene049291:CDS
CCAAGCTGTTAATATCTCCC+AGG 0.614179 3.3:-79711251 None:intergenic
CTTGATTGCCTAGAGCTGAA+GGG 0.615214 3.3:-79709377 None:intergenic
GAATGAAAACAATGGATCTG+AGG 0.618267 3.3:+79709458 MS.gene049291:CDS
GCAATATTTCTTTCCAACAG+GGG 0.618582 3.3:-79707677 None:intergenic
CCAATACATCCACTTGCAGA+GGG 0.625389 3.3:-79709303 None:intergenic
GAGCTAGGTAGAATGAGAGC+TGG 0.627457 3.3:-79709249 None:intergenic
GTTGGAAAGAAATATTGCAC+GGG 0.629534 3.3:+79707682 MS.gene049291:CDS
TGAACATAAGAATCAAGTGG+TGG 0.630537 3.3:+79707768 MS.gene049291:CDS
TGTTGGAAAGAAATATTGCA+CGG 0.632190 3.3:+79707681 MS.gene049291:CDS
ACCATTTAATGAGAAAGACT+GGG 0.636505 3.3:+79709170 MS.gene049291:CDS
TATGCTCCATGGGATCTACC+AGG 0.645247 3.3:+79707496 MS.gene049291:CDS
TAGGGTACTGGAAGACTACA+GGG 0.648401 3.3:+79707731 MS.gene049291:CDS
TTGGCCGGGAATGAAAACAA+TGG 0.650090 3.3:+79709450 MS.gene049291:CDS
GACAAAGACCTAGCTGACAA+TGG 0.652509 3.3:+79707877 MS.gene049291:CDS
GTGCAGACACAGCAGCAACA+GGG 0.657913 3.3:-79709227 None:intergenic
AAATACCCTACAAATCACAT+AGG 0.659266 3.3:-79709103 None:intergenic
TCAAGAGTGGTGATTTGCAA+TGG 0.660182 3.3:+79707644 MS.gene049291:CDS
GAAAGAAATATTGCACGGGA+GGG 0.676449 3.3:+79707686 MS.gene049291:CDS
GATTGAACATAAGAATCAAG+TGG 0.676975 3.3:+79707765 MS.gene049291:CDS
GTACTGGAAGACTACAGGGA+AGG 0.680520 3.3:+79707735 MS.gene049291:CDS
AAGCAACTCAAAGAAATCAG+GGG 0.683918 3.3:-79711373 None:intergenic
GAAAGACTGGGATAGCGAAG+AGG 0.695888 3.3:+79709182 MS.gene049291:CDS
TTTGCCAGTGTGAAACACCA+GGG 0.703208 3.3:-79707803 None:intergenic
GGTGGGGATGATAAGAACCC+TGG 0.707991 3.3:+79707786 MS.gene049291:CDS
GCAACTCAAAGAAATCAGGG+GGG 0.804791 3.3:-79711371 None:intergenic
TTACCAGCTCAACATCAGTG+GGG 0.822926 3.3:-79707399 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAATAAAAAAAGTTG+AGG - chr3.3:79709596-79709615 None:intergenic 10.0%
!! AATTATTATTAGTATTAACA+AGG + chr3.3:79708386-79708405 MS.gene049291:intron 10.0%
!! ATTATTATTAGTATTAACAA+GGG + chr3.3:79708387-79708406 MS.gene049291:intron 10.0%
!! TTATTATTAGTATTAATAAG+GGG + chr3.3:79708423-79708442 MS.gene049291:intron 10.0%
!!! ATTTTTGTTAAAAAAATTTG+GGG + chr3.3:79710516-79710535 MS.gene049291:intron 10.0%
!! TTATTATTAGTATTAACAAG+GGG + chr3.3:79708388-79708407 MS.gene049291:intron 15.0%
!! TTGAAATAAGACTTATATTT+AGG + chr3.3:79708481-79708500 MS.gene049291:intron 15.0%
!!! ACTAATAATAATTTGTCTTA+GGG - chr3.3:79708379-79708398 None:intergenic 15.0%
!!! ATTTCTCTTATTTGTTTTTT+TGG + chr3.3:79708640-79708659 MS.gene049291:intron 15.0%
!!! TACTAATAATAATTTGTCTT+AGG - chr3.3:79708380-79708399 None:intergenic 15.0%
!!! TTATAGTATTTTCATCTTTT+TGG - chr3.3:79711311-79711330 None:intergenic 15.0%
!!! TTTTTGTTAAAAAAATTTGG+GGG + chr3.3:79710517-79710536 MS.gene049291:intron 15.0%
!! AAAGAAATAAATTAAGAAGC+AGG + chr3.3:79710842-79710861 MS.gene049291:intron 20.0%
!! AGCAAAAAAAAATGAGAAAT+CGG + chr3.3:79709846-79709865 MS.gene049291:intron 20.0%
!! ATATGTCAATAATCAAAAAC+TGG - chr3.3:79708054-79708073 None:intergenic 20.0%
!! ATGAAAGTTTGTAAATTAGT+TGG + chr3.3:79710809-79710828 MS.gene049291:intron 20.0%
!! TACTTTCTACACATATTTAT+AGG - chr3.3:79709911-79709930 None:intergenic 20.0%
!! TCAAAGATAACTAAAAAAAG+AGG - chr3.3:79709648-79709667 None:intergenic 20.0%
!!! ATCTCATTTGGAATTAAATA+AGG - chr3.3:79711222-79711241 None:intergenic 20.0%
!!! TATTGTATTCTGCATTTTTT+GGG + chr3.3:79710390-79710409 MS.gene049291:intron 20.0%
!!! TATTTGTTTTTTTGGAAACT+TGG + chr3.3:79708648-79708667 MS.gene049291:intron 20.0%
!!! TGCTTCTTAATTTATTTCTT+TGG - chr3.3:79710843-79710862 None:intergenic 20.0%
! AAACTTTCATTTGCACAAAA+GGG - chr3.3:79710799-79710818 None:intergenic 25.0%
! GAGGAATTATGTTTATCAAT+TGG + chr3.3:79707927-79707946 MS.gene049291:intron 25.0%
! GTACAAAATTCTTATGCATT+AGG + chr3.3:79710042-79710061 MS.gene049291:intron 25.0%
! TTACAAAGATAACAAAGAGA+AGG - chr3.3:79710214-79710233 None:intergenic 25.0%
! TTATATAAAACATCACACTC+TGG + chr3.3:79709690-79709709 MS.gene049291:intron 25.0%
! TTTGACTAACCATTAAAAAC+TGG + chr3.3:79710957-79710976 MS.gene049291:intron 25.0%
!! AAACAAAATTGATGATTCCA+GGG + chr3.3:79707365-79707384 MS.gene049291:CDS 25.0%
!! AATTCCAAATGAGATTTTTG+AGG + chr3.3:79711227-79711246 MS.gene049291:CDS 25.0%
!! TGTCATTTACTTCAGAAATA+TGG - chr3.3:79709278-79709297 None:intergenic 25.0%
!!! AGTTTTTAATGGTTAGTCAA+AGG - chr3.3:79710958-79710977 None:intergenic 25.0%
!!! CAAAAGTATTCTCTCAAAAA+AGG + chr3.3:79708839-79708858 MS.gene049291:intron 25.0%
!!! GTATTGTATTCTGCATTTTT+TGG + chr3.3:79710389-79710408 MS.gene049291:intron 25.0%
!!! GTTTTTAATGGTTAGTCAAA+GGG - chr3.3:79710957-79710976 None:intergenic 25.0%
!!! TGCATTTTTTGGGTATATTT+TGG + chr3.3:79710400-79710419 MS.gene049291:intron 25.0%
!!! TGGAATCATCAATTTTGTTT+CGG - chr3.3:79707365-79707384 None:intergenic 25.0%
!!! TTCTCATTTTTTTTTGCTAC+AGG - chr3.3:79709844-79709863 None:intergenic 25.0%
!!! TTTTTAATGGTTAGTCAAAG+GGG - chr3.3:79710956-79710975 None:intergenic 25.0%
!!! TTTTTTTTACGCCCTATTTT+TGG + chr3.3:79710180-79710199 MS.gene049291:intron 25.0%
AAATACCCTACAAATCACAT+AGG - chr3.3:79709106-79709125 None:intergenic 30.0%
AACAAAAGAGACAGTAAGAT+TGG - chr3.3:79710882-79710901 None:intergenic 30.0%
AACCATTTAATGAGAAAGAC+TGG + chr3.3:79709169-79709188 MS.gene049291:CDS 30.0%
AACTTTCATTTGCACAAAAG+GGG - chr3.3:79710798-79710817 None:intergenic 30.0%
ACAAATGTCCAATGTTCTAA+TGG - chr3.3:79710484-79710503 None:intergenic 30.0%
ACACATATTTATAGGTCATG+TGG - chr3.3:79709903-79709922 None:intergenic 30.0%
ACCATTTAATGAGAAAGACT+GGG + chr3.3:79709170-79709189 MS.gene049291:CDS 30.0%
ACTAACCATTAAAAACTGGA+AGG + chr3.3:79710961-79710980 MS.gene049291:intron 30.0%
ACTTGGTATATTCTTAGTCT+GGG + chr3.3:79708994-79709013 MS.gene049291:intron 30.0%
AGAACAGTTAAGATAAAACC+AGG - chr3.3:79709058-79709077 None:intergenic 30.0%
ATAAACGAAAAGCTATTTGC+TGG + chr3.3:79711327-79711346 MS.gene049291:CDS 30.0%
ATAGGAAACTAAGACAAAAG+AGG - chr3.3:79710453-79710472 None:intergenic 30.0%
CAAACTTTCATTTGCACAAA+AGG - chr3.3:79710800-79710819 None:intergenic 30.0%
CACATATTTATAGGTCATGT+GGG - chr3.3:79709902-79709921 None:intergenic 30.0%
CTTTCTATCAGTTTGATCAT+TGG + chr3.3:79710334-79710353 MS.gene049291:intron 30.0%
GACAAAGCTGTTTATATCAA+AGG - chr3.3:79708242-79708261 None:intergenic 30.0%
GAGTTTAACATGAAAACACA+TGG - chr3.3:79708126-79708145 None:intergenic 30.0%
GATTGAACATAAGAATCAAG+TGG + chr3.3:79707765-79707784 MS.gene049291:CDS 30.0%
TAATGTATCCATTGTGTGTA+TGG + chr3.3:79708298-79708317 MS.gene049291:intron 30.0%
TAGTCTAACATTCATTACCT+AGG - chr3.3:79710647-79710666 None:intergenic 30.0%
TCTTGATAGACATGATAAAG+AGG - chr3.3:79709334-79709353 None:intergenic 30.0%
TGCAATATTTCTTTCCAACA+GGG - chr3.3:79707681-79707700 None:intergenic 30.0%
TGTTGGAAAGAAATATTGCA+CGG + chr3.3:79707681-79707700 MS.gene049291:CDS 30.0%
TTTGATCCTACTAATCAAGA+TGG + chr3.3:79711002-79711021 MS.gene049291:intron 30.0%
! ATGTATCACGTGTTATTAGA+AGG + chr3.3:79710102-79710121 MS.gene049291:intron 30.0%
! CCAACAAAAGCTGTAATTTT+AGG - chr3.3:79708084-79708103 None:intergenic 30.0%
! CCTAAAATTACAGCTTTTGT+TGG + chr3.3:79708081-79708100 MS.gene049291:intron 30.0%
! CTTTGAAAAAAATGGAAGGA+TGG + chr3.3:79708570-79708589 MS.gene049291:intron 30.0%
! GAAACAAAATTGATGATTCC+AGG + chr3.3:79707364-79707383 MS.gene049291:CDS 30.0%
! GATTTGTAGGGTATTTCAAA+AGG + chr3.3:79709110-79709129 MS.gene049291:CDS 30.0%
! TTTCTCAAGAGGAAGATTTT+GGG + chr3.3:79707427-79707446 MS.gene049291:CDS 30.0%
! TTTTCTCAAGAGGAAGATTT+TGG + chr3.3:79707426-79707445 MS.gene049291:CDS 30.0%
!! ATTTTCATCTTTTTGGCCAT+AGG - chr3.3:79711304-79711323 None:intergenic 30.0%
!! CTTACTGTCTCTTTTGTTTA+GGG + chr3.3:79710884-79710903 MS.gene049291:intron 30.0%
!! GTTTTAAGCTTTTTGTCTGT+CGG + chr3.3:79707543-79707562 MS.gene049291:intron 30.0%
!! TCTTACTGTCTCTTTTGTTT+AGG + chr3.3:79710883-79710902 MS.gene049291:intron 30.0%
!! TGGTAATGTATTTTCTCAAG+AGG + chr3.3:79707416-79707435 MS.gene049291:CDS 30.0%
!!! ATTGTATTGGAGGAGTATTT+TGG + chr3.3:79708720-79708739 MS.gene049291:intron 30.0%
!!! TAGGAACAATTTTTTCCCAA+AGG + chr3.3:79708500-79708519 MS.gene049291:intron 30.0%
!!! TTTTTTGGAAACTTGGTATC+CGG + chr3.3:79708655-79708674 MS.gene049291:intron 30.0%
!!! TTTTTTTCTGATTGTTCTCC+TGG + chr3.3:79709037-79709056 MS.gene049291:intron 30.0%
AAAAAAATGGAAGGATGGAG+TGG + chr3.3:79708575-79708594 MS.gene049291:intron 35.0%
AAATGACTGTTCACCAGAAA+TGG - chr3.3:79710163-79710182 None:intergenic 35.0%
AACATAAGAATCAAGTGGTG+GGG + chr3.3:79707770-79707789 MS.gene049291:CDS 35.0%
AACTAAACCCCTCCTAATTT+GGG + chr3.3:79708688-79708707 MS.gene049291:intron 35.0%
AAGATAACAAAGAGAAGGAG+AGG - chr3.3:79710209-79710228 None:intergenic 35.0%
AAGCAACTCAAAGAAATCAG+GGG - chr3.3:79711376-79711395 None:intergenic 35.0%
ACATTTACAAGTATGCTCCA+TGG + chr3.3:79707485-79707504 MS.gene049291:CDS 35.0%
AGGTCCTCAAAAATCTCATT+TGG - chr3.3:79711234-79711253 None:intergenic 35.0%
AGTAACATCCATACACACAA+TGG - chr3.3:79708309-79708328 None:intergenic 35.0%
AGTCTTAACAGTAGCATAAG+TGG - chr3.3:79710300-79710319 None:intergenic 35.0%
AGTTCAGCAATGACATGAAA+AGG - chr3.3:79707463-79707482 None:intergenic 35.0%
ATATGACTACCTCCAATATC+TGG + chr3.3:79710130-79710149 MS.gene049291:intron 35.0%
ATGTGATTATGTTCGACAGA+AGG + chr3.3:79711158-79711177 MS.gene049291:intron 35.0%
CAAGCAACTCAAAGAAATCA+GGG - chr3.3:79711377-79711396 None:intergenic 35.0%
CATTTACAAGTATGCTCCAT+GGG + chr3.3:79707486-79707505 MS.gene049291:CDS 35.0%
CCTAAAGAGGACTTGTATTA+GGG + chr3.3:79708934-79708953 MS.gene049291:intron 35.0%
CCTAATACAAGTCCTCTTTA+GGG - chr3.3:79708936-79708955 None:intergenic 35.0%
CTCAAGCTGTAAATGATTCA+TGG + chr3.3:79708143-79708162 MS.gene049291:intron 35.0%
CTTCGTTGTTATATTGGACT+TGG + chr3.3:79710745-79710764 MS.gene049291:intron 35.0%
GAACATAAGAATCAAGTGGT+GGG + chr3.3:79707769-79707788 MS.gene049291:CDS 35.0%
GAATGAAAACAATGGATCTG+AGG + chr3.3:79709458-79709477 MS.gene049291:CDS 35.0%
GATAAATCTTTGCTCAAGAG+TGG + chr3.3:79707631-79707650 MS.gene049291:intron 35.0%
GCAATATTTCTTTCCAACAG+GGG - chr3.3:79707680-79707699 None:intergenic 35.0%
GTGCAATATTTCTTTCCAAC+AGG - chr3.3:79707682-79707701 None:intergenic 35.0%
GTTCAGCAATGACATGAAAA+GGG - chr3.3:79707462-79707481 None:intergenic 35.0%
GTTGGAAAGAAATATTGCAC+GGG + chr3.3:79707682-79707701 MS.gene049291:CDS 35.0%
TATTAACAGCTTGGTTGGAT+TGG + chr3.3:79711260-79711279 MS.gene049291:CDS 35.0%
TCAAGCAACTCAAAGAAATC+AGG - chr3.3:79711378-79711397 None:intergenic 35.0%
TCCCAGTCTTTCTCATTAAA+TGG - chr3.3:79709174-79709193 None:intergenic 35.0%
TGAACATAAGAATCAAGTGG+TGG + chr3.3:79707768-79707787 MS.gene049291:CDS 35.0%
TGCAAGTGCAATTAATCAGA+AGG - chr3.3:79710577-79710596 None:intergenic 35.0%
TGCTATCTTTCATTTGCTCT+CGG + chr3.3:79710245-79710264 MS.gene049291:intron 35.0%
TGTCTGCTTCGTTGTTATAT+TGG + chr3.3:79710739-79710758 MS.gene049291:intron 35.0%
TTAAATGTTCTACATGGCCT+AGG + chr3.3:79710627-79710646 MS.gene049291:intron 35.0%
TTTCGACGATGAAAATGCAT+TGG + chr3.3:79709431-79709450 MS.gene049291:CDS 35.0%
! AATTTGAGTTCCCCCAAATT+AGG - chr3.3:79708703-79708722 None:intergenic 35.0%
! AGAACTCCTATGTGATTTGT+AGG + chr3.3:79709097-79709116 MS.gene049291:intron 35.0%
! AGATCCATTGTTTTCATTCC+CGG - chr3.3:79709457-79709476 None:intergenic 35.0%
! GAACTCCTATGTGATTTGTA+GGG + chr3.3:79709098-79709117 MS.gene049291:intron 35.0%
! GACTTGGTATATTCTTAGTC+TGG + chr3.3:79708993-79709012 MS.gene049291:intron 35.0%
! GCACTTTTAGTGTTATGCAA+GGG + chr3.3:79709753-79709772 MS.gene049291:intron 35.0%
! TGTAGGGTATTTCAAAAGGA+AGG + chr3.3:79709114-79709133 MS.gene049291:CDS 35.0%
! TTATAGGTCATGTGGGTTTT+GGG - chr3.3:79709895-79709914 None:intergenic 35.0%
! TTCAGCCTTCCAGTTTTTAA+TGG - chr3.3:79710969-79710988 None:intergenic 35.0%
! TTTATAGGTCATGTGGGTTT+TGG - chr3.3:79709896-79709915 None:intergenic 35.0%
!! AAATGAGATTTTTGAGGACC+TGG + chr3.3:79711233-79711252 MS.gene049291:CDS 35.0%
!! AATGAGATTTTTGAGGACCT+GGG + chr3.3:79711234-79711253 MS.gene049291:CDS 35.0%
!! AGGGCTTTGAAAAAAATGGA+AGG + chr3.3:79708566-79708585 MS.gene049291:intron 35.0%
!! TCATTGGTCTTAACATATGC+TGG + chr3.3:79710350-79710369 MS.gene049291:intron 35.0%
!! TGTTTTGTTGGATGTACGTA+TGG + chr3.3:79707958-79707977 MS.gene049291:intron 35.0%
!!! ATTTTTTCCCAAAGGTCTGT+TGG + chr3.3:79708508-79708527 MS.gene049291:intron 35.0%
!!! TATTGGAGGAGTATTTTGGA+GGG + chr3.3:79708724-79708743 MS.gene049291:intron 35.0%
!!! TTGACTGTTTTAGCATGACT+TGG + chr3.3:79708977-79708996 MS.gene049291:intron 35.0%
!!! TTTTTTCCCAAAGGTCTGTT+GGG + chr3.3:79708509-79708528 MS.gene049291:intron 35.0%
AAAAAGAGGAACAGTTCACG+AGG - chr3.3:79709634-79709653 None:intergenic 40.0%
AAAAATTTGGGGGCAAGAAG+TGG + chr3.3:79710527-79710546 MS.gene049291:intron 40.0%
AAAGTCAGAGCTACCAAAGT+TGG - chr3.3:79709542-79709561 None:intergenic 40.0%
AAGGAGAGGTTGCCAAAAAT+AGG - chr3.3:79710195-79710214 None:intergenic 40.0%
AAGTCAGAGCTACCAAAGTT+GGG - chr3.3:79709541-79709560 None:intergenic 40.0%
AATGGAAGCTTGCCAGATAT+TGG - chr3.3:79710145-79710164 None:intergenic 40.0%
ACCAATCTCATCACCAACAA+TGG + chr3.3:79709801-79709820 MS.gene049291:intron 40.0%
ACTAAACCCCTCCTAATTTG+GGG + chr3.3:79708689-79708708 MS.gene049291:intron 40.0%
ACTCACTCCAAAGTGATTAG+TGG + chr3.3:79710601-79710620 MS.gene049291:intron 40.0%
AGCAACTCAAAGAAATCAGG+GGG - chr3.3:79711375-79711394 None:intergenic 40.0%
AGGAGAGGTTGCCAAAAATA+GGG - chr3.3:79710194-79710213 None:intergenic 40.0%
AGGTACGACATCTTTGAATG+AGG + chr3.3:79707908-79707927 MS.gene049291:intron 40.0%
AGTTTCGTTGAATCCAAACC+TGG - chr3.3:79707517-79707536 None:intergenic 40.0%
ATCGTCGAAAATAGCAAGCA+TGG - chr3.3:79709421-79709440 None:intergenic 40.0%
ATTACCAGCTCAACATCAGT+GGG - chr3.3:79707403-79707422 None:intergenic 40.0%
ATTCAAAGATGTCGTACCTG+TGG - chr3.3:79707907-79707926 None:intergenic 40.0%
CAAATTAGGAGGGGTTTAGT+TGG - chr3.3:79708689-79708708 None:intergenic 40.0%
CAACTAAACCCCTCCTAATT+TGG + chr3.3:79708687-79708706 MS.gene049291:intron 40.0%
CATGCATAACCCAATCAGTT+CGG - chr3.3:79707843-79707862 None:intergenic 40.0%
CCCTAAAGAGGACTTGTATT+AGG + chr3.3:79708933-79708952 MS.gene049291:intron 40.0%
CCCTAATACAAGTCCTCTTT+AGG - chr3.3:79708937-79708956 None:intergenic 40.0%
CGTTGTTATATTGGACTTGG+TGG + chr3.3:79710748-79710767 MS.gene049291:intron 40.0%
CTCACTCCAAAGTGATTAGT+GGG + chr3.3:79710602-79710621 MS.gene049291:intron 40.0%
GAAAGAAATATTGCACGGGA+GGG + chr3.3:79707686-79707705 MS.gene049291:CDS 40.0%
GAGAGCAAATGAAAGATAGC+AGG - chr3.3:79710246-79710265 None:intergenic 40.0%
GATGTACGTATGGCGTTTAA+TGG + chr3.3:79707968-79707987 MS.gene049291:intron 40.0%
GGAAACTAAGACAAAAGAGG+CGG - chr3.3:79710450-79710469 None:intergenic 40.0%
GGACAGTGAGAGTAATAAGA+TGG - chr3.3:79708221-79708240 None:intergenic 40.0%
GGAGATATTAACAGCTTGGT+TGG + chr3.3:79711255-79711274 MS.gene049291:CDS 40.0%
GGGAACTCAAATTGTATTGG+AGG + chr3.3:79708710-79708729 MS.gene049291:intron 40.0%
GTATTTCAAAAGGAAGGTCC+TGG + chr3.3:79709120-79709139 MS.gene049291:CDS 40.0%
TAAAGGAGACCGAACTGATT+GGG + chr3.3:79707831-79707850 MS.gene049291:CDS 40.0%
TCACTCCAAAGTGATTAGTG+GGG + chr3.3:79710603-79710622 MS.gene049291:intron 40.0%
TCAGAAATATGGCTTGAGCT+AGG - chr3.3:79709267-79709286 None:intergenic 40.0%
TCCAATGTTCTAATGGCAGA+TGG - chr3.3:79710477-79710496 None:intergenic 40.0%
TGCTGAATTGCATGACACAT+TGG + chr3.3:79709731-79709750 MS.gene049291:intron 40.0%
TGGCTTTCACGTGTAACAAA+GGG - chr3.3:79708034-79708053 None:intergenic 40.0%
TGGGGCTTAAATGTTCTACA+TGG + chr3.3:79710621-79710640 MS.gene049291:intron 40.0%
TGGGGGAACTCAAATTGTAT+TGG + chr3.3:79708707-79708726 MS.gene049291:intron 40.0%
TGTTTAGTCTGCCAGGATAA+TGG - chr3.3:79711411-79711430 None:intergenic 40.0%
TTAAGCCCCACTAATCACTT+TGG - chr3.3:79710611-79710630 None:intergenic 40.0%
! AAGGAATGAAGAGGTTTGGT+AGG + chr3.3:79708598-79708617 MS.gene049291:intron 40.0%
! AGGAATGAAGAGGTTTGGTA+GGG + chr3.3:79708599-79708618 MS.gene049291:intron 40.0%
! GGCACTTTTAGTGTTATGCA+AGG + chr3.3:79709752-79709771 MS.gene049291:intron 40.0%
! TCAAGAGTGGTGATTTGCAA+TGG + chr3.3:79707644-79707663 MS.gene049291:CDS 40.0%
! TTGGTTGCGAACTGTTTTGT+TGG + chr3.3:79707946-79707965 MS.gene049291:intron 40.0%
! TTTTTCCCAAAGGTCTGTTG+GGG + chr3.3:79708510-79708529 MS.gene049291:intron 40.0%
!! ACTGTCTCTTTTGTTTAGGG+AGG + chr3.3:79710887-79710906 MS.gene049291:intron 40.0%
!! CTGTCTCTTTTGTTTAGGGA+GGG + chr3.3:79710888-79710907 MS.gene049291:intron 40.0%
!! GGAGAGGGCTTTGAAAAAAA+TGG + chr3.3:79708562-79708581 MS.gene049291:intron 40.0%
!!! AGGAGTATTTTGGAGGGTTT+TGG + chr3.3:79708730-79708749 MS.gene049291:intron 40.0%
!!! GTATTGGAGGAGTATTTTGG+AGG + chr3.3:79708723-79708742 MS.gene049291:intron 40.0%
AAATGGAAGGATGGAGTGGA+AGG + chr3.3:79708579-79708598 MS.gene049291:intron 45.0%
AGAAATCGGATCATGAGCCA+TGG + chr3.3:79709860-79709879 MS.gene049291:intron 45.0%
AGCAAGAATGGTAACCACCA+TGG - chr3.3:79709779-79709798 None:intergenic 45.0%
AGTCAGAGCTACCAAAGTTG+GGG - chr3.3:79709540-79709559 None:intergenic 45.0%
ATCTGGCAAGCTTCCATTTC+TGG + chr3.3:79710147-79710166 MS.gene049291:intron 45.0%
ATGAATCGGGCAACAGAAGT+AGG + chr3.3:79707712-79707731 MS.gene049291:CDS 45.0%
ATGGAGTGGAAGGAATGAAG+AGG + chr3.3:79708589-79708608 MS.gene049291:intron 45.0%
CAATCAGTTCGGTCTCCTTT+AGG - chr3.3:79707832-79707851 None:intergenic 45.0%
CATCTGAACAGACCCTAAAG+AGG + chr3.3:79708921-79708940 MS.gene049291:intron 45.0%
CATTACCAGCTCAACATCAG+TGG - chr3.3:79707404-79707423 None:intergenic 45.0%
CCAAGCTGTTAATATCTCCC+AGG - chr3.3:79711254-79711273 None:intergenic 45.0%
CCAATACATCCACTTGCAGA+GGG - chr3.3:79709306-79709325 None:intergenic 45.0%
CCTACTAATCAAGATGGCAG+AGG + chr3.3:79711008-79711027 MS.gene049291:intron 45.0%
CCTCTGCCATCTTGATTAGT+AGG - chr3.3:79711011-79711030 None:intergenic 45.0%
CCTGGGAGATATTAACAGCT+TGG + chr3.3:79711251-79711270 MS.gene049291:CDS 45.0%
CTAAACCCCTCCTAATTTGG+GGG + chr3.3:79708690-79708709 MS.gene049291:intron 45.0%
CTAAAGGAGACCGAACTGAT+TGG + chr3.3:79707830-79707849 MS.gene049291:CDS 45.0%
CTATCAAGATTGATGCCCTC+TGG + chr3.3:79709345-79709364 MS.gene049291:CDS 45.0%
CTTGATTGCCTAGAGCTGAA+GGG - chr3.3:79709380-79709399 None:intergenic 45.0%
GACAAAGACCTAGCTGACAA+TGG + chr3.3:79707877-79707896 MS.gene049291:CDS 45.0%
GCAACTCAAAGAAATCAGGG+GGG - chr3.3:79711374-79711393 None:intergenic 45.0%
GCCATCTGCCATTAGAACAT+TGG + chr3.3:79710473-79710492 MS.gene049291:intron 45.0%
GGAAAGAAATATTGCACGGG+AGG + chr3.3:79707685-79707704 MS.gene049291:CDS 45.0%
GGTCTGTTCAGATGTTTCGA+GGG - chr3.3:79708915-79708934 None:intergenic 45.0%
GTCTGTTCAGATGTTTCGAG+GGG - chr3.3:79708914-79708933 None:intergenic 45.0%
GTGGAAGGAATGAAGAGGTT+TGG + chr3.3:79708594-79708613 MS.gene049291:intron 45.0%
GTTCTAATGGCAGATGGCAT+AGG - chr3.3:79710471-79710490 None:intergenic 45.0%
TCCAATACATCCACTTGCAG+AGG - chr3.3:79709307-79709326 None:intergenic 45.0%
TCCTGGCAGACTAAACATGA+TGG + chr3.3:79711414-79711433 MS.gene049291:CDS 45.0%
TGAATCGGGCAACAGAAGTA+GGG + chr3.3:79707713-79707732 MS.gene049291:CDS 45.0%
TGAGATTGGTGCAGCAAGAA+TGG - chr3.3:79709791-79709810 None:intergenic 45.0%
TGAGTTCCCCCAAATTAGGA+GGG - chr3.3:79708699-79708718 None:intergenic 45.0%
TGGTACTTCTTTACCCCTGT+TGG + chr3.3:79707664-79707683 MS.gene049291:CDS 45.0%
TTACCAGCTCAACATCAGTG+GGG - chr3.3:79707402-79707421 None:intergenic 45.0%
TTAGTGTTATGCAAGGGCCA+TGG + chr3.3:79709759-79709778 MS.gene049291:intron 45.0%
TTGAGTTCCCCCAAATTAGG+AGG - chr3.3:79708700-79708719 None:intergenic 45.0%
TTGGCCGGGAATGAAAACAA+TGG + chr3.3:79709450-79709469 MS.gene049291:CDS 45.0%
TTGGGGGCTTATGGAGTTAT+GGG + chr3.3:79708527-79708546 MS.gene049291:intron 45.0%
TTTGCACAAAAGGGGTAGCA+AGG - chr3.3:79710790-79710809 None:intergenic 45.0%
TTTGCCAGTGTGAAACACCA+GGG - chr3.3:79707806-79707825 None:intergenic 45.0%
! AAGCACGCACGAAGTATCTA+CGG - chr3.3:79708169-79708188 None:intergenic 45.0%
! ACATATGCTGGCAGTGCTTT+TGG + chr3.3:79710362-79710381 MS.gene049291:intron 45.0%
! ACGATGAAAATGCATTGGCC+GGG + chr3.3:79709436-79709455 MS.gene049291:CDS 45.0%
! AGCTTGGTTGGATTGGATGA+TGG + chr3.3:79711267-79711286 MS.gene049291:CDS 45.0%
! CGTGCTTACATAGCATTGAG+TGG + chr3.3:79708182-79708201 MS.gene049291:intron 45.0%
! CTGGCTTTCACGTGTAACAA+AGG - chr3.3:79708035-79708054 None:intergenic 45.0%
! GACGATGAAAATGCATTGGC+CGG + chr3.3:79709435-79709454 MS.gene049291:CDS 45.0%
! GATGGAAGCGGTTTTTCCTA+TGG + chr3.3:79711285-79711304 MS.gene049291:CDS 45.0%
! GGAATGAAGAGGTTTGGTAG+GGG + chr3.3:79708600-79708619 MS.gene049291:intron 45.0%
! TTTTCCCAAAGGTCTGTTGG+GGG + chr3.3:79708511-79708530 MS.gene049291:intron 45.0%
! TTTTCCTGCCTTCGACTAGA+AGG - chr3.3:79710553-79710572 None:intergenic 45.0%
!! CAGTAGCATAAGTGGACTAG+TGG - chr3.3:79710292-79710311 None:intergenic 45.0%
!! CGACAGAAGGTTGATAATCC+TGG + chr3.3:79711171-79711190 MS.gene049291:intron 45.0%
!! CTTTGAGTTGCTTGACCTAG+AGG + chr3.3:79711383-79711402 MS.gene049291:CDS 45.0%
!! CTTTTGTTTAGGGAGGGTGA+AGG + chr3.3:79710894-79710913 MS.gene049291:intron 45.0%
!! GCCATTGTTGGTGATGAGAT+TGG - chr3.3:79709805-79709824 None:intergenic 45.0%
!! GTTGGATTGGATGATGGAAG+CGG + chr3.3:79711273-79711292 MS.gene049291:CDS 45.0%
!! TAGCATAAGTGGACTAGTGG+AGG - chr3.3:79710289-79710308 None:intergenic 45.0%
!! TAGGGTACTGGAAGACTACA+GGG + chr3.3:79707731-79707750 MS.gene049291:CDS 45.0%
!! AATTATTATTAGTATTAATA+AGG + chr3.3:79708421-79708440 MS.gene049291:intron 5.0%
!! ATTATTATTAGTATTAATAA+GGG + chr3.3:79708422-79708441 MS.gene049291:intron 5.0%
!!! ATATTTTTGTTAAAAAAATT+TGG + chr3.3:79710514-79710533 MS.gene049291:intron 5.0%
!!! TATTTTTGTTAAAAAAATTT+GGG + chr3.3:79710515-79710534 MS.gene049291:intron 5.0%
AAAGGTCTGTTGGGGGCTTA+TGG + chr3.3:79708518-79708537 MS.gene049291:intron 50.0%
AGAAATATTGCACGGGAGGG+AGG + chr3.3:79707689-79707708 MS.gene049291:CDS 50.0%
AGAACCCTGGTGTTTCACAC+TGG + chr3.3:79707799-79707818 MS.gene049291:CDS 50.0%
AGAAGTGGCCTTCTAGTCGA+AGG + chr3.3:79710542-79710561 MS.gene049291:intron 50.0%
AGCTGACAATGGTGTTCCAC+AGG + chr3.3:79707888-79707907 MS.gene049291:CDS 50.0%
ATAAGCCCCCAACAGACCTT+TGG - chr3.3:79708519-79708538 None:intergenic 50.0%
CAATCTGCCATCGCCATTGT+TGG - chr3.3:79709817-79709836 None:intergenic 50.0%
CACACTGGCAAAGCTCCTAA+AGG + chr3.3:79707814-79707833 MS.gene049291:CDS 50.0%
CCATACTGTGCACCATTCCT+GGG - chr3.3:79709147-79709166 None:intergenic 50.0%
CCCTCTGCAAGTGGATGTAT+TGG + chr3.3:79709303-79709322 MS.gene049291:CDS 50.0%
CTCATCACCAACAATGGCGA+TGG + chr3.3:79709807-79709826 MS.gene049291:intron 50.0%
CTTATGGAGTTATGGGGGAG+GGG + chr3.3:79708534-79708553 MS.gene049291:intron 50.0%
CTTTGCCAGTGTGAAACACC+AGG - chr3.3:79707807-79707826 None:intergenic 50.0%
GAAAGACTGGGATAGCGAAG+AGG + chr3.3:79709182-79709201 MS.gene049291:CDS 50.0%
GAGCTAGGTAGAATGAGAGC+TGG - chr3.3:79709252-79709271 None:intergenic 50.0%
GAGGGGTTTAGTTGGTCCTT+GGG - chr3.3:79708681-79708700 None:intergenic 50.0%
GAGTTCCCCCAAATTAGGAG+GGG - chr3.3:79708698-79708717 None:intergenic 50.0%
GCCATCATGTTTAGTCTGCC+AGG - chr3.3:79711418-79711437 None:intergenic 50.0%
GCTTATGGAGTTATGGGGGA+GGG + chr3.3:79708533-79708552 MS.gene049291:intron 50.0%
GCTTGATTGCCTAGAGCTGA+AGG - chr3.3:79709381-79709400 None:intergenic 50.0%
GGAAGACTACAGGGAAGGAT+AGG + chr3.3:79707740-79707759 MS.gene049291:CDS 50.0%
GGAAGCTTGCCAGATATTGG+AGG - chr3.3:79710142-79710161 None:intergenic 50.0%
GGGTCTGTTCAGATGTTTCG+AGG - chr3.3:79708916-79708935 None:intergenic 50.0%
GGTCAAGCAAACAACGCTGA+AGG + chr3.3:79711192-79711211 MS.gene049291:CDS 50.0%
GTACTGGAAGACTACAGGGA+AGG + chr3.3:79707735-79707754 MS.gene049291:CDS 50.0%
GTGGAACACCATTGTCAGCT+AGG - chr3.3:79707888-79707907 None:intergenic 50.0%
GTTGGGGGCTTATGGAGTTA+TGG + chr3.3:79708526-79708545 MS.gene049291:intron 50.0%
TAAGCCCCCAACAGACCTTT+GGG - chr3.3:79708518-79708537 None:intergenic 50.0%
TATGCTCCATGGGATCTACC+AGG + chr3.3:79707496-79707515 MS.gene049291:CDS 50.0%
TCAGCGTTGTTTGCTTGACC+AGG - chr3.3:79711192-79711211 None:intergenic 50.0%
TCCAAACCTGGTAGATCCCA+TGG - chr3.3:79707505-79707524 None:intergenic 50.0%
TCCATACTGTGCACCATTCC+TGG - chr3.3:79709148-79709167 None:intergenic 50.0%
TCCATGGGATCTACCAGGTT+TGG + chr3.3:79707501-79707520 MS.gene049291:intron 50.0%
TGGGGGCTTATGGAGTTATG+GGG + chr3.3:79708528-79708547 MS.gene049291:intron 50.0%
TTCAGATGTTTCGAGGGGAG+AGG - chr3.3:79708909-79708928 None:intergenic 50.0%
! ATGAAGAGGTTTGGTAGGGG+AGG + chr3.3:79708603-79708622 MS.gene049291:intron 50.0%
! TGAAGAGGTTTGGTAGGGGA+GGG + chr3.3:79708604-79708623 MS.gene049291:intron 50.0%
!! ACCTAGAGGTGCCATTATCC+TGG + chr3.3:79711397-79711416 MS.gene049291:CDS 50.0%
!! GTAGGGTACTGGAAGACTAC+AGG + chr3.3:79707730-79707749 MS.gene049291:CDS 50.0%
!! GTTTTGGGTCTGTCTAGCCA+TGG - chr3.3:79709880-79709899 None:intergenic 50.0%
!! TACCAAAGTTGGGGAGCATC+TGG - chr3.3:79709531-79709550 None:intergenic 50.0%
AAAAGGAAGGTCCTGGTCCC+AGG + chr3.3:79709127-79709146 MS.gene049291:CDS 55.0%
ACGACACACCCTTCAGCTCT+AGG + chr3.3:79709369-79709388 MS.gene049291:CDS 55.0%
CCCAGGAATGGTGCACAGTA+TGG + chr3.3:79709144-79709163 MS.gene049291:CDS 55.0%
GAAACTTGGTATCCGGCCCA+AGG + chr3.3:79708662-79708681 MS.gene049291:intron 55.0%
GACATGCATCCCTCTGCAAG+TGG + chr3.3:79709294-79709313 MS.gene049291:CDS 55.0%
GATGTTTCGAGGGGAGAGGA+TGG - chr3.3:79708905-79708924 None:intergenic 55.0%
GGAGGGGTTTAGTTGGTCCT+TGG - chr3.3:79708682-79708701 None:intergenic 55.0%
GGCTTATGGAGTTATGGGGG+AGG + chr3.3:79708532-79708551 MS.gene049291:intron 55.0%
GGGCAACAGAAGTAGGGTAC+TGG + chr3.3:79707719-79707738 MS.gene049291:CDS 55.0%
GGGGGCTTATGGAGTTATGG+GGG + chr3.3:79708529-79708548 MS.gene049291:intron 55.0%
GGTGGGGATGATAAGAACCC+TGG + chr3.3:79707786-79707805 MS.gene049291:CDS 55.0%
GGTTTAGTTGGTCCTTGGGC+CGG - chr3.3:79708677-79708696 None:intergenic 55.0%
GTGCAGACACAGCAGCAACA+GGG - chr3.3:79709230-79709249 None:intergenic 55.0%
GTGGGGTGAAAACGAAACCC+TGG - chr3.3:79707385-79707404 None:intergenic 55.0%
GTGTTATGCAAGGGCCATGG+TGG + chr3.3:79709762-79709781 MS.gene049291:intron 55.0%
GTTTGGTAGGGGAGGGCTTT+GGG + chr3.3:79708611-79708630 MS.gene049291:intron 55.0%
TCACCCCACTGATGTTGAGC+TGG + chr3.3:79707396-79707415 MS.gene049291:CDS 55.0%
TGCCAGATGCTCCCCAACTT+TGG + chr3.3:79709526-79709545 MS.gene049291:intron 55.0%
TTTGGTAGGGGAGGGCTTTG+GGG + chr3.3:79708612-79708631 MS.gene049291:intron 55.0%
! GCCAGGATAATGGCACCTCT+AGG - chr3.3:79711401-79711420 None:intergenic 55.0%
AGTTATGGGGGAGGGGAGAG+AGG + chr3.3:79708541-79708560 MS.gene049291:intron 60.0%
CACGGGAGGGAGGATGAATC+GGG + chr3.3:79707699-79707718 MS.gene049291:CDS 60.0%
CGAGGGGAGAGGATGGCTTT+GGG - chr3.3:79708898-79708917 None:intergenic 60.0%
GAAGGTCCTGGTCCCAGGAA+TGG + chr3.3:79709132-79709151 MS.gene049291:CDS 60.0%
GCACGGGAGGGAGGATGAAT+CGG + chr3.3:79707698-79707717 MS.gene049291:CDS 60.0%
GGTGCAGACACAGCAGCAAC+AGG - chr3.3:79709231-79709250 None:intergenic 60.0%
GTGGCCTTCTAGTCGAAGGC+AGG + chr3.3:79710546-79710565 MS.gene049291:intron 60.0%
TCGAGGGGAGAGGATGGCTT+TGG - chr3.3:79708899-79708918 None:intergenic 60.0%
TGTGCACCATTCCTGGGACC+AGG - chr3.3:79709141-79709160 None:intergenic 60.0%
! GAAGGGTGTGTCGTGCCAGA+GGG - chr3.3:79709363-79709382 None:intergenic 60.0%
! GGTTTGGTAGGGGAGGGCTT+TGG + chr3.3:79708610-79708629 MS.gene049291:intron 60.0%
! TGAAGGGTGTGTCGTGCCAG+AGG - chr3.3:79709364-79709383 None:intergenic 60.0%
!! GAGAGGATGGCTTTGGGAGC+AGG - chr3.3:79708892-79708911 None:intergenic 60.0%
GGGGGAGGGGAGAGAGGAGA+GGG + chr3.3:79708547-79708566 MS.gene049291:intron 70.0%
TGGGGGAGGGGAGAGAGGAG+AGG + chr3.3:79708546-79708565 MS.gene049291:intron 70.0%


Chromosome Type Strat End Strand Name
chr3.3 gene 79707358 79711440 79707358 ID=MS.gene049291
chr3.3 mRNA 79707358 79711440 79707358 ID=MS.gene049291.t1;Parent=MS.gene049291
chr3.3 exon 79707358 79707517 79707358 ID=MS.gene049291.t1.exon1;Parent=MS.gene049291.t1
chr3.3 CDS 79707358 79707517 79707358 ID=cds.MS.gene049291.t1;Parent=MS.gene049291.t1
chr3.3 exon 79707632 79707909 79707632 ID=MS.gene049291.t1.exon2;Parent=MS.gene049291.t1
chr3.3 CDS 79707632 79707909 79707632 ID=cds.MS.gene049291.t1;Parent=MS.gene049291.t1
chr3.3 exon 79709099 79709479 79709099 ID=MS.gene049291.t1.exon3;Parent=MS.gene049291.t1
chr3.3 CDS 79709099 79709479 79709099 ID=cds.MS.gene049291.t1;Parent=MS.gene049291.t1
chr3.3 exon 79711177 79711440 79711177 ID=MS.gene049291.t1.exon4;Parent=MS.gene049291.t1
chr3.3 CDS 79711177 79711440 79711177 ID=cds.MS.gene049291.t1;Parent=MS.gene049291.t1
Gene Sequence

>MS.gene049291

ATGGCCGAAACAAAATTGATGATTCCAGGGTTTCGTTTTCACCCCACTGATGTTGAGCTGGTAATGTATTTTCTCAAGAGGAAGATTTTGGGTAGAAAATTCCCTTTTCATGTCATTGCTGAACTTGACATTTACAAGTATGCTCCATGGGATCTACCAGGTTTGGATTCAACGAAACTCGACTAGTTTTAAGCTTTTTGTCTGTCGGTGAAGTATTTTAGTAGTAAGTACATTTGTGTTTCTCTGATGTTTTGTTTATTGTTTTATTTTTCAGATAAATCTTTGCTCAAGAGTGGTGATTTGCAATGGTACTTCTTTACCCCTGTTGGAAAGAAATATTGCACGGGAGGGAGGATGAATCGGGCAACAGAAGTAGGGTACTGGAAGACTACAGGGAAGGATAGGTCGATTGAACATAAGAATCAAGTGGTGGGGATGATAAGAACCCTGGTGTTTCACACTGGCAAAGCTCCTAAAGGAGACCGAACTGATTGGGTTATGCATGAATACAGACTTGAAGACAAAGACCTAGCTGACAATGGTGTTCCACAGGTACGACATCTTTGAATGAGGAATTATGTTTATCAATTGGTTGCGAACTGTTTTGTTGGATGTACGTATGGCGTTTAATGGTCTGTGCACGTGATGTCTAGTACTGTTGCTGCTATTATTGCCCTTTGTTACACGTGAAAGCCAGTTTTTGATTATTGACATATTTCAATACCTAAAATTACAGCTTTTGTTGGATATGACATCATAGTAGAACCATGTGTTTTCATGTTAAACTCAAGCTGTAAATGATTCATGGCCGTAGATACTTCGTGCGTGCTTACATAGCATTGAGTGGCAGCTTTGTTTTGCCATCTTATTACTCTCACTGTCCTTTGATATAAACAGCTTTGTCATTTTCATATATATTAAGAAAAGTAAATAGTGTATTTAATGTATCCATTGTGTGTATGGATGTTACTAAAATGCACTTTTGCGTATAGACATGTCTATCTCTGACATGTTATCTCCCTAAGACAAATTATTATTAGTATTAACAAGGGGCCCTAAGACAAATTATTATTAGTATTAATAAGGGGTATATTAAAAAACTAAAAATAATGTATCTACTAATTTGAAATAAGACTTATATTTAGGAACAATTTTTTCCCAAAGGTCTGTTGGGGGCTTATGGAGTTATGGGGGAGGGGAGAGAGGAGAGGGCTTTGAAAAAAATGGAAGGATGGAGTGGAAGGAATGAAGAGGTTTGGTAGGGGAGGGCTTTGGGGAGTTTATTTCTCTTATTTGTTTTTTTGGAAACTTGGTATCCGGCCCAAGGACCAACTAAACCCCTCCTAATTTGGGGGAACTCAAATTGTATTGGAGGAGTATTTTGGAGGGTTTTGGTAAATTCTTCAAATCAATTCTAAGTTGTTACAATACTCTTAAAATCAGCAATATATTAATCACAAGCAATCATTTATCATTCTATACAAAAGTATTCTCTCAAAAAAGGTGTAACATCTCTCTATTTATTTATTCACCTGCTCCCAAAGCCATCCTCTCCCCTCGAAACATCTGAACAGACCCTAAAGAGGACTTGTATTAGGGACAGCGATAGTACTATGCATTTGACTGTTTTAGCATGACTTGGTATATTCTTAGTCTGGGTTGTTGACTTTCTGTCTCATTTTTTTTCTGATTGTTCTCCTGGTTTTATCTTAACTGTTCTACTGATTTATTTGTATTGCAGAACTCCTATGTGATTTGTAGGGTATTTCAAAAGGAAGGTCCTGGTCCCAGGAATGGTGCACAGTATGGAAAACCATTTAATGAGAAAGACTGGGATAGCGAAGAGGAAATTGATTATGTACAAGCTGTCCCTGTTGCTGCTGTGTCTGCACCAGCTCTCATTCTACCTAGCTCAAGCCATATTTCTGAAGTAAATGACATGCATCCCTCTGCAAGTGGATGTATTGGACTGACCTCTTTATCATGTCTATCAAGATTGATGCCCTCTGGCACGACACACCCTTCAGCTCTAGGCAATCAAGCTGATGATGACATTTTATCCATGCTTGCTATTTTCGACGATGAAAATGCATTGGCCGGGAATGAAAACAATGGATCTGAGGTGTGTAATCTATTTCTTGATATTTATATTTGTTACAACTAACTTGTGCCAGATGCTCCCCAACTTTGGTAGCTCTGACTTTATCTTTCAACATCTTTTTTCTACACTTTTTACCTCAACTTTTTTTATTTTTTTTATCTCGTATTTGACTCCTCGTGAACTGTTCCTCTTTTTTTAGTTATCTTTGAAATAGTGAAATTATCGTGTATTTTATATAAAACATCACACTCTGGCTTCATTTGTCAGTCACTTGCTGAATTGCATGACACATTGGCACTTTTAGTGTTATGCAAGGGCCATGGTGGTTACCATTCTTGCTGCACCAATCTCATCACCAACAATGGCGATGGCAGATTGAAAGCCTGTAGCAAAAAAAAATGAGAAATCGGATCATGAGCCATGGCTAGACAGACCCAAAACCCACATGACCTATAAATATGTGTAGAAAGTAGTAAAGAGTATATAGAATACTATCTTGAAATAAAAATATATATTTTAAATAGTCTCATTTTTTAGAATTTTAAATAATGACTAATTAGATTACAGTAAACAGTAATTTATAGTACAAAATTCTTATGCATTAGGATGAAATATGTATAATGTATATAGTATAATACATATAATGTATCACGTGTTATTAGAAGGTCTGTATATGACTACCTCCAATATCTGGCAAGCTTCCATTTCTGGTGAACAGTCATTTTTTTTACGCCCTATTTTTGGCAACCTCTCCTTCTCTTTGTTATCTTTGTAATTCTTCTTTCCTGCTATCTTTCATTTGCTCTCGGTTCTGTTATTATTTTTTTCCTCCACTAGTCCACTTATGCTACTGTTAAGACTTATGATATTATGTGCTTTCTATCAGTTTGATCATTGGTCTTAACATATGCTGGCAGTGCTTTTGGTTTTGTATTGTATTCTGCATTTTTTGGGTATATTTTGGTATATGTGTTCTCTTTTATGATTGCCGCCTCTTTTGTCTTAGTTTCCTATGCCATCTGCCATTAGAACATTGGACATTTGTGTTATACTTTATATTTTTGTTAAAAAAATTTGGGGGCAAGAAGTGGCCTTCTAGTCGAAGGCAGGAAAAGCCTTCTGATTAATTGCACTTGCAATTAACTCACTCCAAAGTGATTAGTGGGGCTTAAATGTTCTACATGGCCTAGGTAATGAATGTTAGACTATGCTGTAGTGTGCATAAGTGTGAGATTAGACATATACTTTCAATAATTTAATGCAATGCTGCATTCTACTTATGTCTGCTTCGTTGTTATATTGGACTTGGTGGTGTCATTTGAGAATATCCTTGCTACCCCTTTTGTGCAAATGAAAGTTTGTAAATTAGTTGGTTAGTTTTCCAAAGAAATAAATTAAGAAGCAGGCATATCATCATTTTCCAATCTTACTGTCTCTTTTGTTTAGGGAGGGTGAAGGTTGTTTATTTTTGAATAGATTTTTGTTTATTAGTTTCCCCTTTGACTAACCATTAAAAACTGGAAGGCTGAATTGCTTAAAAAATTTTGATCCTACTAATCAAGATGGCAGAGGTATTTGTTTTCTTATCTAGAAATGTATTGAGTTTCTTTTCTGTAGATTTTATTTTGTAATATTATGAGTCATAGACAGTTTTAACATGCTTGCTTTAATCTACATCACTTTGCTCATATATGCTAATATGTGATTATGTTCGACAGAAGGTTGATAATCCTGGTCAAGCAAACAACGCTGAAGGTGCACCTTATTTAATTCCAAATGAGATTTTTGAGGACCTGGGAGATATTAACAGCTTGGTTGGATTGGATGATGGAAGCGGTTTTTCCTATGGCCAAAAAGATGAAAATACTATAAACGAAAAGCTATTTGCTGGCGACATCTCTTTGTTTTGCAACCCCCCTGATTTCTTTGAGTTGCTTGACCTAGAGGTGCCATTATCCTGGCAGACTAAACATGATGGCTGA
Protein sequence

>MS.gene049291.t1

MAETKLMIPGFRFHPTDVELVMYFLKRKILGRKFPFHVIAELDIYKYAPWDLPDKSLLKSGDLQWYFFTPVGKKYCTGGRMNRATEVGYWKTTGKDRSIEHKNQVVGMIRTLVFHTGKAPKGDRTDWVMHEYRLEDKDLADNGVPQNSYVICRVFQKEGPGPRNGAQYGKPFNEKDWDSEEEIDYVQAVPVAAVSAPALILPSSSHISEVNDMHPSASGCIGLTSLSCLSRLMPSGTTHPSALGNQADDDILSMLAIFDDENALAGNENNGSEKVDNPGQANNAEGAPYLIPNEIFEDLGDINSLVGLDDGSGFSYGQKDENTINEKLFAGDISLFCNPPDFFELLDLEVPLSWQTKHDG