AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene054948

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene054948.t1 MTR_3g096140 92.500 360 24 1 1 360 1 357 0.0 689
MS.gene054948.t1 MTR_3g096140 92.035 339 24 1 22 360 1 336 0.0 645
MS.gene054948.t1 MTR_3g096140 95.238 273 13 0 1 273 1 273 0.0 543
MS.gene054948.t1 MTR_8g063550 65.106 235 76 3 1 235 1 229 1.16e-106 316
MS.gene054948.t1 MTR_8g063550 65.106 235 76 3 1 235 1 229 4.46e-106 318
MS.gene054948.t1 MTR_8g063550 65.106 235 76 3 1 235 1 229 9.12e-106 317
MS.gene054948.t1 MTR_8g093580 64.255 235 78 3 1 235 1 229 1.37e-105 319
MS.gene054948.t1 MTR_1g090723 54.359 195 82 3 9 201 10 199 1.86e-68 226
MS.gene054948.t1 MTR_0036s0150 57.143 175 73 2 9 182 7 180 2.45e-68 224
MS.gene054948.t1 MTR_1g097300 50.754 199 93 1 1 194 13 211 5.64e-68 224
MS.gene054948.t1 MTR_1g090723 54.872 195 80 4 9 201 10 198 1.05e-67 223
MS.gene054948.t1 MTR_1g090723 54.872 195 80 4 9 201 10 198 1.49e-67 224
MS.gene054948.t1 MTR_1g090720 56.742 178 70 2 7 178 42 218 3.52e-63 209
MS.gene054948.t1 MTR_6g477900 57.616 151 64 0 9 159 8 158 9.08e-61 195
MS.gene054948.t1 MTR_3g064580 55.215 163 69 3 9 168 8 169 9.80e-57 196
MS.gene054948.t1 MTR_5g076850 53.704 162 74 1 9 169 8 169 9.93e-57 195
MS.gene054948.t1 MTR_2g064090 55.333 150 66 1 9 157 8 157 5.44e-56 186
MS.gene054948.t1 MTR_4g108760 51.592 157 72 2 9 163 19 173 1.95e-50 172
MS.gene054948.t1 MTR_5g069030 39.453 256 144 5 10 259 28 278 3.58e-50 177
MS.gene054948.t1 MTR_4g036030 51.656 151 68 3 9 157 9 156 5.86e-50 171
MS.gene054948.t1 MTR_3g093050 43.961 207 96 3 10 209 25 218 7.64e-50 176
MS.gene054948.t1 MTR_3g093050 43.961 207 96 3 10 209 25 218 1.48e-49 176
MS.gene054948.t1 MTR_2g062730 51.974 152 69 3 9 158 12 161 1.58e-49 169
MS.gene054948.t1 MTR_3g435150 51.250 160 74 2 6 163 15 172 2.68e-49 168
MS.gene054948.t1 MTR_1g096430 49.686 159 75 3 9 165 9 164 2.98e-49 169
MS.gene054948.t1 MTR_8g076110 41.346 208 109 5 9 214 8 204 5.00e-49 167
MS.gene054948.t1 MTR_5g014300 46.286 175 84 2 9 176 8 179 7.08e-49 167
MS.gene054948.t1 MTR_3g088110 49.383 162 76 3 1 159 1 159 7.31e-49 166
MS.gene054948.t1 MTR_2g078700 53.165 158 66 4 9 161 25 179 3.38e-48 167
MS.gene054948.t1 MTR_4g098630 39.474 228 114 4 9 212 8 235 3.88e-48 165
MS.gene054948.t1 MTR_5g021710 49.669 151 71 3 9 157 10 157 5.65e-48 166
MS.gene054948.t1 MTR_6g084430 51.678 149 68 2 9 157 7 151 8.74e-48 164
MS.gene054948.t1 MTR_4g035590 50.331 151 71 2 9 158 10 157 1.19e-47 165
MS.gene054948.t1 MTR_2g079990 47.651 149 76 1 9 157 18 164 1.42e-47 165
MS.gene054948.t1 MTR_4g101680 50.993 151 69 3 9 157 9 156 2.06e-47 164
MS.gene054948.t1 MTR_3g093040 48.649 148 76 0 10 157 111 258 2.80e-47 163
MS.gene054948.t1 MTR_2g086880 42.246 187 95 3 7 188 18 196 6.10e-47 167
MS.gene054948.t1 MTR_7g085220 45.062 162 74 3 9 157 10 169 6.12e-47 162
MS.gene054948.t1 MTR_7g085260 51.282 156 66 4 9 157 19 171 7.31e-47 164
MS.gene054948.t1 MTR_2g086880 49.324 148 67 2 7 154 18 157 8.25e-47 167
MS.gene054948.t1 MTR_6g012670 46.154 169 83 3 9 173 22 186 1.89e-46 161
MS.gene054948.t1 MTR_3g109340 49.045 157 75 3 9 163 24 177 1.53e-45 159
MS.gene054948.t1 MTR_8g467490 45.732 164 76 4 5 157 12 173 2.14e-45 160
MS.gene054948.t1 MTR_3g070030 44.068 177 93 3 1 173 12 186 3.29e-45 158
MS.gene054948.t1 MTR_7g100990 36.522 230 119 6 9 225 13 228 4.91e-45 157
MS.gene054948.t1 MTR_3g109340 48.408 157 75 3 9 163 24 176 5.33e-45 158
MS.gene054948.t1 MTR_6g011860 45.963 161 75 4 7 157 15 173 8.68e-45 158
MS.gene054948.t1 MTR_2157s0010 43.373 166 80 3 9 162 10 173 9.56e-45 155
MS.gene054948.t1 MTR_5g041940 47.403 154 75 2 9 158 5 156 2.16e-44 154
MS.gene054948.t1 MTR_2g080010 45.062 162 74 4 9 157 17 176 4.07e-44 155
MS.gene054948.t1 MTR_4g134460 45.570 158 81 3 3 159 50 203 6.28e-44 157
MS.gene054948.t1 MTR_5g012080 46.405 153 75 5 9 157 9 158 8.41e-44 155
MS.gene054948.t1 MTR_7g011130 43.503 177 82 4 10 170 22 196 1.13e-43 154
MS.gene054948.t1 MTR_4g081870 44.586 157 81 3 9 161 11 165 1.77e-43 152
MS.gene054948.t1 MTR_5g040420 44.172 163 79 4 5 157 12 172 3.09e-43 154
MS.gene054948.t1 MTR_8g059170 47.020 151 76 2 9 157 16 164 3.39e-43 152
MS.gene054948.t1 MTR_7g011120 35.521 259 139 6 10 256 11 253 4.59e-43 152
MS.gene054948.t1 MTR_7g005280 47.561 164 71 5 9 167 17 170 5.18e-43 150
MS.gene054948.t1 MTR_4g089135 43.182 176 73 4 7 157 15 188 8.39e-43 152
MS.gene054948.t1 MTR_2g093810 47.097 155 74 4 9 157 16 168 9.46e-43 151
MS.gene054948.t1 MTR_4g075980 45.000 160 78 4 1 157 9 161 1.77e-42 150
MS.gene054948.t1 MTR_2g079990 49.265 136 67 1 9 144 18 151 2.16e-42 152
MS.gene054948.t1 MTR_1g008740 48.701 154 73 4 9 159 15 165 2.22e-42 151
MS.gene054948.t1 MTR_8g094580 45.806 155 77 3 9 159 9 160 2.40e-42 149
MS.gene054948.t1 MTR_1g008740 48.701 154 73 4 9 159 29 179 2.99e-42 151
MS.gene054948.t1 MTR_8g024480 43.125 160 81 2 9 158 17 176 3.73e-42 152
MS.gene054948.t1 MTR_6g032770 46.405 153 74 4 10 157 21 170 3.91e-42 151
MS.gene054948.t1 MTR_3g096920 46.104 154 77 3 9 159 9 159 1.97e-41 147
MS.gene054948.t1 MTR_2g064470 47.531 162 71 5 1 157 6 158 2.89e-41 147
MS.gene054948.t1 MTR_3g070040 43.636 165 83 4 11 170 12 171 1.76e-39 143
MS.gene054948.t1 MTR_1g069805 45.033 151 75 3 9 157 12 156 2.04e-39 141
MS.gene054948.t1 MTR_7g097090 44.667 150 75 3 9 156 12 155 1.27e-37 137
MS.gene054948.t1 MTR_5g090970 40.719 167 85 3 3 157 14 178 1.77e-37 137
MS.gene054948.t1 MTR_8g023840 47.297 148 69 5 10 154 14 155 2.24e-37 139
MS.gene054948.t1 MTR_2g068880 41.212 165 81 3 8 157 23 186 4.12e-37 136
MS.gene054948.t1 MTR_5g090970 40.120 167 85 3 3 157 14 177 4.46e-37 136
MS.gene054948.t1 MTR_3g096920 46.575 146 73 3 9 154 9 149 5.50e-37 136
MS.gene054948.t1 MTR_8g099750 41.071 168 84 4 9 169 16 175 7.70e-37 133
MS.gene054948.t1 MTR_3g116070 45.926 135 68 3 9 140 25 157 1.72e-36 135
MS.gene054948.t1 MTR_8g023860 43.919 148 74 5 10 154 15 156 8.66e-36 135
MS.gene054948.t1 MTR_2g068920 40.606 165 82 4 8 157 22 185 3.97e-35 130
MS.gene054948.t1 MTR_8g023900 43.709 151 78 5 10 157 15 161 7.75e-35 133
MS.gene054948.t1 MTR_8g023900 43.226 155 79 5 6 157 192 340 4.20e-34 131
MS.gene054948.t1 MTR_3g098810 40.719 167 85 3 9 165 16 178 3.34e-34 126
MS.gene054948.t1 MTR_8g023930 42.384 151 78 5 10 157 27 171 1.09e-33 130
MS.gene054948.t1 MTR_3g098810 45.385 130 63 2 9 134 16 141 2.53e-31 117
MS.gene054948.t1 MTR_4g052620 38.217 157 90 5 6 155 4 160 4.64e-30 116
MS.gene054948.t1 MTR_2g086690 39.355 155 86 6 9 155 6 160 5.01e-30 115
MS.gene054948.t1 MTR_7g105170 33.036 224 127 9 7 211 4 223 3.82e-29 113
MS.gene054948.t1 MTR_8g023880 40.462 173 75 8 3 157 2 164 2.14e-28 112
MS.gene054948.t1 MTR_4g094302 38.125 160 77 6 9 158 13 160 1.43e-26 104
MS.gene054948.t1 MTR_8g094580 44.660 103 52 2 61 159 5 106 4.52e-25 102
MS.gene054948.t1 MTR_4g094302 42.308 130 59 6 9 134 13 130 2.07e-24 98.2
MS.gene054948.t1 MTR_8g093790 36.250 160 76 7 9 166 12 147 3.30e-20 87.4
MS.gene054948.t1 MTR_3g096400 33.516 182 98 8 1 168 1 173 5.71e-19 84.7
MS.gene054948.t1 MTR_7g070140 48.750 80 39 1 57 134 12 91 3.19e-18 80.5
MS.gene054948.t1 MTR_7g083330 29.851 134 89 4 1 132 11 141 3.21e-14 70.9
MS.gene054948.t1 MTR_7g083360 28.082 146 101 3 10 154 13 155 6.50e-14 68.9
MS.gene054948.t1 MTR_1g087190 60.870 46 17 1 9 53 7 52 3.40e-13 63.9
MS.gene054948.t1 MTR_7g070150 53.704 54 22 2 104 157 7 57 6.06e-12 61.6
MS.gene054948.t1 MTR_7g116460 34.194 155 84 10 13 157 11 157 1.04e-11 63.9
MS.gene054948.t1 MTR_7g083370 30.000 130 75 4 10 132 13 133 8.22e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene054948.t1 AT5G09330 47.866 328 135 10 1 305 1 315 1.40e-90 280
MS.gene054948.t1 AT5G09330 47.866 328 135 10 1 305 1 315 1.40e-90 280
MS.gene054948.t1 AT5G09330 47.866 328 135 10 1 305 1 315 1.40e-90 280
MS.gene054948.t1 AT5G09330 47.866 328 135 10 1 305 1 315 1.40e-90 280
MS.gene054948.t1 AT5G09330 47.866 328 135 10 1 305 1 315 1.40e-90 280
MS.gene054948.t1 AT5G64060 55.042 238 99 3 1 238 1 230 5.99e-88 269
MS.gene054948.t1 AT5G04410 61.538 182 69 1 7 188 9 189 9.81e-79 252
MS.gene054948.t1 AT3G10500 63.253 166 61 0 7 172 9 174 1.88e-74 240
MS.gene054948.t1 AT1G34190 47.867 211 109 1 5 215 14 223 1.11e-67 223
MS.gene054948.t1 AT3G10480 56.725 171 73 1 7 177 27 196 7.87e-65 212
MS.gene054948.t1 AT3G10480 56.977 172 72 2 7 177 27 197 1.32e-64 212
MS.gene054948.t1 AT3G10490 55.114 176 77 2 7 181 27 201 3.30e-64 204
MS.gene054948.t1 AT3G10490 55.114 176 77 2 7 181 27 201 4.89e-63 208
MS.gene054948.t1 AT1G34180 50.267 187 92 1 5 190 14 200 1.23e-62 207
MS.gene054948.t1 AT1G34180 50.267 187 92 1 5 190 14 200 1.03e-61 207
MS.gene054948.t1 AT3G17730 58.278 151 63 0 9 159 8 158 2.35e-60 194
MS.gene054948.t1 AT1G34180 47.236 199 92 2 5 190 14 212 1.90e-59 199
MS.gene054948.t1 AT3G10480 48.293 205 71 3 7 177 27 230 3.23e-59 200
MS.gene054948.t1 AT1G65910 52.273 176 83 1 7 181 6 181 1.17e-58 200
MS.gene054948.t1 AT1G34180 47.236 199 92 2 5 190 14 212 1.29e-58 199
MS.gene054948.t1 AT1G33060 54.054 148 68 0 10 157 27 174 1.58e-54 189
MS.gene054948.t1 AT1G33060 54.054 148 68 0 10 157 27 174 1.67e-54 189
MS.gene054948.t1 AT3G03200 55.333 150 66 1 9 157 8 157 6.21e-54 185
MS.gene054948.t1 AT5G24590 46.860 207 92 5 10 215 16 205 1.02e-53 183
MS.gene054948.t1 AT5G17260 52.667 150 70 1 9 157 8 157 8.29e-53 182
MS.gene054948.t1 AT2G27300 53.378 148 61 2 7 154 14 153 1.22e-52 177
MS.gene054948.t1 AT3G49530 51.333 150 72 1 10 158 16 165 3.43e-51 176
MS.gene054948.t1 AT1G54330 52.903 155 70 1 9 163 8 159 4.15e-51 172
MS.gene054948.t1 AT4G35580 54.054 148 68 0 10 157 12 159 4.20e-51 178
MS.gene054948.t1 AT4G17980 51.266 158 73 2 4 157 3 160 4.86e-51 171
MS.gene054948.t1 AT4G35580 54.054 148 68 0 10 157 12 159 5.23e-51 178
MS.gene054948.t1 AT4G35580 54.054 148 68 0 10 157 12 159 5.36e-51 178
MS.gene054948.t1 AT5G61430 52.866 157 70 2 9 163 18 172 7.16e-51 173
MS.gene054948.t1 AT4G17980 51.266 158 73 2 4 157 3 160 1.01e-50 171
MS.gene054948.t1 AT3G49530 51.333 150 72 1 10 158 16 165 1.19e-50 176
MS.gene054948.t1 AT5G22290 47.126 174 76 3 3 167 17 183 1.26e-50 172
MS.gene054948.t1 AT5G39610 54.430 158 66 3 9 163 22 176 1.93e-50 170
MS.gene054948.t1 AT5G46590 49.359 156 77 2 4 157 3 158 1.17e-49 168
MS.gene054948.t1 AT1G71930 48.734 158 78 2 7 163 9 164 2.82e-49 168
MS.gene054948.t1 AT1G71930 48.734 158 78 2 7 163 9 164 2.82e-49 168
MS.gene054948.t1 AT4G10350 50.331 151 74 1 9 158 11 161 3.77e-49 169
MS.gene054948.t1 AT3G44290 51.020 147 64 2 8 154 15 153 7.01e-49 164
MS.gene054948.t1 AT3G18400 51.678 149 69 2 9 157 7 152 8.30e-49 167
MS.gene054948.t1 AT5G07680 51.592 157 72 2 9 163 5 159 8.70e-49 167
MS.gene054948.t1 AT1G32870 51.786 168 77 2 7 172 10 175 9.69e-49 172
MS.gene054948.t1 AT1G32870 51.786 168 77 2 7 172 10 175 1.19e-48 172
MS.gene054948.t1 AT5G07680 51.592 157 72 2 9 163 19 173 1.28e-48 167
MS.gene054948.t1 AT1G12260 47.561 164 77 4 9 168 9 167 1.56e-48 167
MS.gene054948.t1 AT1G12260 47.561 164 77 4 9 168 9 167 2.35e-48 168
MS.gene054948.t1 AT1G32870 51.786 168 77 2 7 172 46 211 2.78e-48 171
MS.gene054948.t1 AT3G44290 51.370 146 63 2 9 154 16 153 5.54e-48 165
MS.gene054948.t1 AT2G18060 41.500 200 104 4 9 206 11 199 5.93e-48 166
MS.gene054948.t1 AT2G18060 41.500 200 104 4 9 206 11 199 5.93e-48 166
MS.gene054948.t1 AT5G18270 44.811 212 105 6 9 215 23 227 6.09e-48 165
MS.gene054948.t1 AT5G46590 52.174 138 65 1 4 140 3 140 1.18e-47 163
MS.gene054948.t1 AT1G01720 46.746 169 83 3 1 165 1 166 1.70e-47 162
MS.gene054948.t1 AT5G18270 44.340 212 106 6 9 215 23 227 1.83e-47 164
MS.gene054948.t1 AT1G33280 49.669 151 72 2 9 158 10 157 2.09e-47 163
MS.gene054948.t1 AT2G24430 50.318 157 73 3 3 157 12 165 3.18e-47 163
MS.gene054948.t1 AT2G24430 50.318 157 73 3 3 157 12 165 3.18e-47 163
MS.gene054948.t1 AT1G77450 48.701 154 73 3 9 159 12 162 3.92e-47 160
MS.gene054948.t1 AT3G29035 49.697 165 79 2 9 171 26 188 5.50e-47 162
MS.gene054948.t1 AT1G62700 48.701 154 70 4 9 158 9 157 7.51e-47 164
MS.gene054948.t1 AT1G62700 48.701 154 70 4 9 158 9 157 7.51e-47 164
MS.gene054948.t1 AT4G36160 48.026 152 74 3 9 158 12 160 1.44e-46 163
MS.gene054948.t1 AT4G36160 48.026 152 74 3 9 158 12 160 1.44e-46 163
MS.gene054948.t1 AT4G36160 48.026 152 74 3 9 158 16 164 1.53e-46 163
MS.gene054948.t1 AT1G69490 38.756 209 110 3 9 201 11 217 2.24e-46 159
MS.gene054948.t1 AT4G27410 45.513 156 83 1 9 164 16 169 2.94e-46 160
MS.gene054948.t1 AT1G52890 47.333 150 77 1 9 158 16 163 3.34e-46 160
MS.gene054948.t1 AT3G15170 48.765 162 77 3 6 163 19 178 6.27e-46 159
MS.gene054948.t1 AT3G15500 46.667 150 78 1 9 158 16 163 8.94e-46 159
MS.gene054948.t1 AT5G53950 50.311 161 72 4 2 157 12 169 3.19e-45 159
MS.gene054948.t1 AT5G08790 46.626 163 78 4 3 159 2 161 3.21e-45 157
MS.gene054948.t1 AT1G56010 45.506 178 90 4 1 174 14 188 3.74e-45 157
MS.gene054948.t1 AT3G04060 49.677 155 73 3 9 160 22 174 6.26e-45 157
MS.gene054948.t1 AT1G79580 48.026 152 74 3 9 158 19 167 6.54e-45 158
MS.gene054948.t1 AT1G79580 48.026 152 74 3 9 158 19 167 6.54e-45 158
MS.gene054948.t1 AT1G79580 48.026 152 74 3 9 158 19 167 6.54e-45 158
MS.gene054948.t1 AT1G79580 48.026 152 74 3 9 158 19 167 6.54e-45 158
MS.gene054948.t1 AT1G79580 48.026 152 74 3 9 158 19 167 6.54e-45 158
MS.gene054948.t1 AT1G32510 45.000 160 80 2 6 157 5 164 1.94e-44 154
MS.gene054948.t1 AT5G62380 48.684 152 73 3 9 158 9 157 2.68e-44 156
MS.gene054948.t1 AT5G62380 48.684 152 73 3 9 158 9 157 2.68e-44 156
MS.gene054948.t1 AT5G66300 45.181 166 85 4 9 171 14 176 4.07e-44 154
MS.gene054948.t1 AT3G12977 46.753 154 79 2 9 161 20 171 1.45e-43 152
MS.gene054948.t1 AT1G61110 47.531 162 70 4 9 157 18 177 2.37e-43 153
MS.gene054948.t1 AT2G02450 44.516 155 81 3 6 159 50 200 3.59e-43 154
MS.gene054948.t1 AT3G04070 44.099 161 76 3 9 157 12 170 4.34e-43 152
MS.gene054948.t1 AT2G02450 44.516 155 81 3 6 159 50 200 5.53e-43 154
MS.gene054948.t1 AT4G27410 40.936 171 86 1 9 164 16 186 9.55e-43 151
MS.gene054948.t1 AT5G39820 42.857 175 75 5 6 157 19 191 9.73e-43 152
MS.gene054948.t1 AT1G26870 44.785 163 77 4 6 157 15 175 1.36e-42 153
MS.gene054948.t1 AT5G13180 48.125 160 71 4 9 164 16 167 2.55e-42 148
MS.gene054948.t1 AT1G76420 48.366 153 74 3 9 159 24 173 3.34e-42 150
MS.gene054948.t1 AT3G15510 43.069 202 89 9 11 198 21 210 3.37e-42 151
MS.gene054948.t1 AT5G63790 44.785 163 81 4 3 159 45 204 6.24e-42 149
MS.gene054948.t1 AT5G63790 44.785 163 81 4 3 159 55 214 7.28e-42 149
MS.gene054948.t1 AT3G04070 39.720 214 109 6 9 215 12 212 1.66e-41 149
MS.gene054948.t1 AT2G33480 51.634 153 63 4 9 158 17 161 1.73e-41 146
MS.gene054948.t1 AT2G17040 44.444 153 75 4 8 157 7 152 2.76e-41 146
MS.gene054948.t1 AT2G33480 50.000 152 65 3 9 158 17 159 3.77e-41 145
MS.gene054948.t1 AT2G43000 42.949 156 86 2 3 157 14 167 2.65e-40 143
MS.gene054948.t1 AT1G32770 41.975 162 83 2 9 159 18 179 3.57e-40 145
MS.gene054948.t1 AT3G61910 43.636 165 75 4 9 157 13 175 8.95e-40 144
MS.gene054948.t1 AT2G46770 40.964 166 80 3 9 158 18 181 2.43e-39 143
MS.gene054948.t1 AT1G52880 45.283 159 73 4 11 157 21 177 1.04e-38 140
MS.gene054948.t1 AT5G04395 43.452 168 77 4 2 155 24 187 1.81e-36 130
MS.gene054948.t1 AT4G28530 43.114 167 71 4 9 157 12 172 5.40e-36 134
MS.gene054948.t1 AT3G12910 38.953 172 85 4 3 157 17 185 3.83e-34 128
MS.gene054948.t1 AT5G61430 55.046 109 47 1 57 163 1 109 7.83e-34 126
MS.gene054948.t1 AT1G56010 47.863 117 58 1 61 174 5 121 1.41e-30 117
MS.gene054948.t1 AT3G12977 49.524 105 52 1 59 162 15 119 1.73e-30 116
MS.gene054948.t1 AT4G10350 50.526 95 47 0 64 158 20 114 1.20e-29 115
MS.gene054948.t1 AT3G10490 53.922 102 45 2 81 181 1 101 4.35e-29 115
MS.gene054948.t1 AT3G10490 53.922 102 45 2 81 181 1 101 4.35e-29 115
MS.gene054948.t1 AT4G01520 40.000 155 79 5 10 157 7 154 5.11e-29 114
MS.gene054948.t1 AT4G01550 40.698 172 83 7 10 171 7 169 1.23e-28 116
MS.gene054948.t1 AT5G22380 38.217 157 90 5 10 159 8 164 2.11e-28 111
MS.gene054948.t1 AT4G01540 40.000 155 79 5 10 157 7 154 3.87e-28 114
MS.gene054948.t1 AT3G44350 38.710 155 90 5 10 159 8 162 5.46e-28 110
MS.gene054948.t1 AT4G01540 40.000 155 79 5 10 157 7 154 6.27e-28 113
MS.gene054948.t1 AT4G01540 40.000 155 79 5 10 157 7 154 6.48e-28 114
MS.gene054948.t1 AT4G01540 40.000 155 79 5 10 157 7 154 6.90e-28 113
MS.gene054948.t1 AT1G02230 40.127 157 77 6 6 154 1 148 2.56e-25 105
MS.gene054948.t1 AT3G44350 37.908 153 90 5 10 157 8 160 2.80e-25 100
MS.gene054948.t1 AT3G04420 37.333 150 87 2 10 157 6 150 2.47e-24 101
MS.gene054948.t1 AT3G04420 40.800 125 72 1 10 132 6 130 6.87e-24 101
MS.gene054948.t1 AT2G33480 49.524 105 49 3 57 158 1 104 1.64e-23 97.1
MS.gene054948.t1 AT1G02250 38.816 152 77 5 10 154 6 148 1.06e-21 95.1
MS.gene054948.t1 AT5G64530 35.329 167 74 7 9 157 5 155 1.17e-20 89.0
MS.gene054948.t1 AT5G64530 40.909 132 58 6 9 136 5 120 6.29e-20 85.9
MS.gene054948.t1 AT1G01010 38.608 158 74 7 10 154 6 153 6.75e-20 90.9
MS.gene054948.t1 AT1G02220 35.294 153 79 5 10 155 6 145 1.17e-19 89.7
MS.gene054948.t1 AT2G18060 36.364 121 65 3 87 206 2 111 3.01e-19 87.0
MS.gene054948.t1 AT4G28530 38.281 128 59 3 9 118 12 137 4.25e-19 87.0
MS.gene054948.t1 AT5G22290 42.222 90 37 2 87 167 1 84 8.27e-18 82.0
MS.gene054948.t1 AT2G43000 39.080 87 52 1 72 157 3 89 2.26e-15 74.3
MS.gene054948.t1 AT3G56530 30.263 152 95 4 9 155 54 199 2.19e-14 73.6
MS.gene054948.t1 AT5G14000 33.071 127 79 3 10 134 18 140 1.66e-12 65.1
MS.gene054948.t1 AT5G14000 33.071 127 79 3 10 134 18 140 3.66e-12 65.5
MS.gene054948.t1 AT3G55210 25.904 166 99 6 6 155 10 167 3.36e-11 63.5
MS.gene054948.t1 AT1G28470 30.939 181 99 9 10 173 80 251 3.79e-11 63.9
MS.gene054948.t1 AT3G04430 30.435 138 72 6 13 133 6 136 4.24e-11 62.0

Find 109 sgRNAs with CRISPR-Local

Find 327 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCCAGTCTTTCTCATTAAA+TGG 0.189856 3.1:-76553795 None:intergenic
TGTCATTTACTTCAGAAATA+TGG 0.230925 3.1:-76553899 None:intergenic
TCCATACTGTGCACCATTCC+TGG 0.233076 3.1:-76553769 None:intergenic
ATCTCATTTGGAATTAAATA+AGG 0.245537 3.1:-76555843 None:intergenic
CAATCAGTTCGGTCTCCTTT+AGG 0.274643 3.1:-76552453 None:intergenic
GTGCAATATTTCTTTCCAAC+AGG 0.361824 3.1:-76552303 None:intergenic
TCAAGCAACTCAAAGAAATC+AGG 0.367048 3.1:-76555999 None:intergenic
GGTGCAGACACAGCAGCAAC+AGG 0.376155 3.1:-76553852 None:intergenic
GAAACAAAATTGATGATTCC+AGG 0.377486 3.1:+76551988 MS.gene054948:CDS
TGTTTAGTCTGCCAGGATAA+TGG 0.379048 3.1:-76556032 None:intergenic
CCCAGGAATGGTGCACAGTA+TGG 0.387270 3.1:+76553768 MS.gene054948:CDS
AGAACTCCTATGTGATTTGT+AGG 0.387741 3.1:+76553721 MS.gene054948:intron
AACCATTTAATGAGAAAGAC+TGG 0.390374 3.1:+76553793 MS.gene054948:CDS
AGTTCAGCAATGACATGAAA+AGG 0.397881 3.1:-76552084 None:intergenic
CCCTCTGCAAGTGGATGTAT+TGG 0.400344 3.1:+76553927 MS.gene054948:CDS
GCACGGGAGGGAGGATGAAT+CGG 0.411671 3.1:+76552322 MS.gene054948:CDS
TATTAACAGCTTGGTTGGAT+TGG 0.414108 3.1:+76555884 MS.gene054948:CDS
CCATACTGTGCACCATTCCT+GGG 0.415740 3.1:-76553768 None:intergenic
GGAGATATTAACAGCTTGGT+TGG 0.445872 3.1:+76555879 MS.gene054948:CDS
GACGATGAAAATGCATTGGC+CGG 0.464243 3.1:+76554059 MS.gene054948:CDS
ACCTAGAGGTGCCATTATCC+TGG 0.465437 3.1:+76556021 MS.gene054948:CDS
ATGAATCGGGCAACAGAAGT+AGG 0.466475 3.1:+76552336 MS.gene054948:CDS
CTAAAGGAGACCGAACTGAT+TGG 0.467195 3.1:+76552454 MS.gene054948:CDS
TGGTACTTCTTTACCCCTGT+TGG 0.468244 3.1:+76552288 MS.gene054948:CDS
GCCATCATGTTTAGTCTGCC+AGG 0.468396 3.1:-76556039 None:intergenic
ATAAACGAAAAGCTATTTGC+TGG 0.469573 3.1:+76555951 MS.gene054948:CDS
AAAAGGAAGGTCCTGGTCCC+AGG 0.470057 3.1:+76553751 MS.gene054948:CDS
TAAAGGAGACCGAACTGATT+GGG 0.479184 3.1:+76552455 MS.gene054948:CDS
CACGGGAGGGAGGATGAATC+GGG 0.479266 3.1:+76552323 MS.gene054948:CDS
CTTTGAGTTGCTTGACCTAG+AGG 0.489029 3.1:+76556007 MS.gene054948:CDS
CGACAGAAGGTTGATAATCC+TGG 0.495670 3.1:+76555795 MS.gene054948:intron
ATGACACACCCTTCAGCTCT+AGG 0.498439 3.1:+76553993 MS.gene054948:CDS
TCAGCGTTGTTTGCTTGACC+AGG 0.500954 3.1:-76555813 None:intergenic
CATTTACAAGTATGCTCCAT+GGG 0.502977 3.1:+76552110 MS.gene054948:CDS
TCACCCCACTGATGTTGAGC+TGG 0.506550 3.1:+76552020 MS.gene054948:CDS
CTATCAAGATTGATGCCCTC+TGG 0.507191 3.1:+76553969 MS.gene054948:CDS
CACACTGGCAAAGCTCCTAA+AGG 0.508822 3.1:+76552438 MS.gene054948:CDS
GGGCAACAGAAGTAGGGTAC+TGG 0.511584 3.1:+76552343 MS.gene054948:CDS
GTAGGGTACTGGAAGACTAC+AGG 0.511858 3.1:+76552354 MS.gene054948:CDS
GCTTGATTGCCTAGAGCTGA+AGG 0.517653 3.1:-76554002 None:intergenic
CTTTGCCAGTGTGAAACACC+AGG 0.519578 3.1:-76552428 None:intergenic
GTTCAGCAATGACATGAAAA+GGG 0.521712 3.1:-76552083 None:intergenic
CCTGGGAGATATTAACAGCT+TGG 0.523071 3.1:+76555875 MS.gene054948:CDS
GTGGAACACCATTGTCAGCT+AGG 0.523981 3.1:-76552509 None:intergenic
GATTTGTAGGGTATTTCAAA+AGG 0.527496 3.1:+76553734 MS.gene054948:CDS
AGCTTGGTTGGATTGGATGA+TGG 0.527918 3.1:+76555891 MS.gene054948:CDS
TGTAGGGTATTTCAAAAGGA+AGG 0.527921 3.1:+76553738 MS.gene054948:CDS
TCCAATACATCCACTTGCAG+AGG 0.532823 3.1:-76553928 None:intergenic
TTTCGACGATGAAAATGCAT+TGG 0.532966 3.1:+76554055 MS.gene054948:CDS
ATCGTCGAAAATAGCAAGCA+TGG 0.533664 3.1:-76554042 None:intergenic
CATGCATAACCCAATCAGTT+CGG 0.542397 3.1:-76552464 None:intergenic
CAAGCAACTCAAAGAAATCA+GGG 0.542667 3.1:-76555998 None:intergenic
AGCTGACAATGGTGTTCCAC+AGG 0.546378 3.1:+76552512 MS.gene054948:CDS
AGAAATATTGCACGGGAGGG+AGG 0.549227 3.1:+76552313 MS.gene054948:CDS
TCTTGATAGACATGATAAAG+AGG 0.553266 3.1:-76553955 None:intergenic
TCCAAACCTGGTAGATCCCA+TGG 0.553951 3.1:-76552126 None:intergenic
AAACAAAATTGATGATTCCA+GGG 0.554783 3.1:+76551989 MS.gene054948:CDS
GAACATAAGAATCAAGTGGT+GGG 0.560868 3.1:+76552393 MS.gene054948:CDS
TGCAATATTTCTTTCCAACA+GGG 0.561122 3.1:-76552302 None:intergenic
GAAGGTCCTGGTCCCAGGAA+TGG 0.561485 3.1:+76553756 MS.gene054948:CDS
TCAGAAATATGGCTTGAGCT+AGG 0.568979 3.1:-76553888 None:intergenic
GATAAATCTTTGCTCAAGAG+TGG 0.570392 3.1:+76552255 MS.gene054948:intron
GTTGGATTGGATGATGGAAG+CGG 0.572350 3.1:+76555897 MS.gene054948:CDS
GGAAGACTACAGGGAAGGAT+AGG 0.572952 3.1:+76552364 MS.gene054948:CDS
ACATTTACAAGTATGCTCCA+TGG 0.574983 3.1:+76552109 MS.gene054948:CDS
ACGATGAAAATGCATTGGCC+GGG 0.583391 3.1:+76554060 MS.gene054948:CDS
GTATTTCAAAAGGAAGGTCC+TGG 0.583445 3.1:+76553744 MS.gene054948:CDS
GAACTCCTATGTGATTTGTA+GGG 0.583857 3.1:+76553722 MS.gene054948:intron
AACATAAGAATCAAGTGGTG+GGG 0.590194 3.1:+76552394 MS.gene054948:CDS
TGAATCGGGCAACAGAAGTA+GGG 0.592463 3.1:+76552337 MS.gene054948:CDS
GGTCAAGCAAACAACGCTGA+AGG 0.593547 3.1:+76555816 MS.gene054948:CDS
ATTACCAGCTCAACATCAGT+GGG 0.596276 3.1:-76552024 None:intergenic
GGAAAGAAATATTGCACGGG+AGG 0.596853 3.1:+76552309 MS.gene054948:CDS
GACATGCATCCCTCTGCAAG+TGG 0.596887 3.1:+76553918 MS.gene054948:CDS
AGAACCCTGGTGTTTCACAC+TGG 0.601634 3.1:+76552423 MS.gene054948:CDS
GCCAGGATAATGGCACCTCT+AGG 0.602723 3.1:-76556022 None:intergenic
TGTGCACCATTCCTGGGACC+AGG 0.603992 3.1:-76553762 None:intergenic
GTGGGGTGAAAACGAAACCC+TGG 0.604367 3.1:-76552006 None:intergenic
CATTACCAGCTCAACATCAG+TGG 0.606060 3.1:-76552025 None:intergenic
AGCAACTCAAAGAAATCAGG+GGG 0.608948 3.1:-76555996 None:intergenic
TCCTGGCAGACTAAACATGA+TGG 0.610442 3.1:+76556038 MS.gene054948:CDS
CCAAGCTGTTAATATCTCCC+AGG 0.614179 3.1:-76555875 None:intergenic
CTTGATTGCCTAGAGCTGAA+GGG 0.615214 3.1:-76554001 None:intergenic
GAATGAAAACAATGGATCTG+AGG 0.618267 3.1:+76554082 MS.gene054948:CDS
GCAATATTTCTTTCCAACAG+GGG 0.618582 3.1:-76552301 None:intergenic
CCAATACATCCACTTGCAGA+GGG 0.625389 3.1:-76553927 None:intergenic
GAGCTAGGTAGAATGAGAGC+TGG 0.627457 3.1:-76553873 None:intergenic
GTTGGAAAGAAATATTGCAC+GGG 0.629534 3.1:+76552306 MS.gene054948:CDS
TGAACATAAGAATCAAGTGG+TGG 0.630537 3.1:+76552392 MS.gene054948:CDS
TGAAGGGTGTGTCATGCCAG+AGG 0.630682 3.1:-76553985 None:intergenic
TGTTGGAAAGAAATATTGCA+CGG 0.632190 3.1:+76552305 MS.gene054948:CDS
ACCATTTAATGAGAAAGACT+GGG 0.636505 3.1:+76553794 MS.gene054948:CDS
GAAGGGTGTGTCATGCCAGA+GGG 0.638957 3.1:-76553984 None:intergenic
TATGCTCCATGGGATCTACC+AGG 0.645247 3.1:+76552120 MS.gene054948:CDS
TAGGGTACTGGAAGACTACA+GGG 0.648401 3.1:+76552355 MS.gene054948:CDS
TTGGCCGGGAATGAAAACAA+TGG 0.650090 3.1:+76554074 MS.gene054948:CDS
GACAAAGACCTAGCTGACAA+TGG 0.652509 3.1:+76552501 MS.gene054948:CDS
GTGCAGACACAGCAGCAACA+GGG 0.657913 3.1:-76553851 None:intergenic
AAATACCCTACAAATCACAT+AGG 0.659266 3.1:-76553727 None:intergenic
TCAAGAGTGGTGATTTGCAA+TGG 0.660182 3.1:+76552268 MS.gene054948:CDS
GAAAGAAATATTGCACGGGA+GGG 0.676449 3.1:+76552310 MS.gene054948:CDS
GATTGAACATAAGAATCAAG+TGG 0.676975 3.1:+76552389 MS.gene054948:CDS
GTACTGGAAGACTACAGGGA+AGG 0.680520 3.1:+76552359 MS.gene054948:CDS
AAGCAACTCAAAGAAATCAG+GGG 0.683918 3.1:-76555997 None:intergenic
GAAAGACTGGGATAGCGAAG+AGG 0.695888 3.1:+76553806 MS.gene054948:CDS
TTTGCCAGTGTGAAACACCA+GGG 0.703208 3.1:-76552427 None:intergenic
GGTGGGGATGATAAGAACCC+TGG 0.707991 3.1:+76552410 MS.gene054948:CDS
GCAACTCAAAGAAATCAGGG+GGG 0.804791 3.1:-76555995 None:intergenic
TTACCAGCTCAACATCAGTG+GGG 0.822926 3.1:-76552023 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAATAAAAAAAGTTG+AGG - chr3.1:76554220-76554239 None:intergenic 10.0%
!! AATTATTATTAGTATTAACA+AGG + chr3.1:76553010-76553029 MS.gene054948:intron 10.0%
!! ATTATTATTAGTATTAACAA+GGG + chr3.1:76553011-76553030 MS.gene054948:intron 10.0%
!! TTATTATTAGTATTAATAAG+GGG + chr3.1:76553047-76553066 MS.gene054948:intron 10.0%
!!! ATATTTTTGTTAAAAAAGAT+TGG + chr3.1:76555138-76555157 MS.gene054948:intron 10.0%
!!! TATTTTTGTTAAAAAAGATT+GGG + chr3.1:76555139-76555158 MS.gene054948:intron 10.0%
!! TTATTATTAGTATTAACAAG+GGG + chr3.1:76553012-76553031 MS.gene054948:intron 15.0%
!! TTGAAATAAGACTTATATTT+AGG + chr3.1:76553105-76553124 MS.gene054948:intron 15.0%
!!! ACTAATAATAATTTGTCTTA+GGG - chr3.1:76553003-76553022 None:intergenic 15.0%
!!! ATTTCTCTTATTTGTTTTTT+TGG + chr3.1:76553264-76553283 MS.gene054948:intron 15.0%
!!! ATTTTTGTTAAAAAAGATTG+GGG + chr3.1:76555140-76555159 MS.gene054948:intron 15.0%
!!! TACTAATAATAATTTGTCTT+AGG - chr3.1:76553004-76553023 None:intergenic 15.0%
!!! TTATAGTATTTTCATCTTTT+TGG - chr3.1:76555935-76555954 None:intergenic 15.0%
!! AAAGAAATAAATTAAGAAGC+AGG + chr3.1:76555466-76555485 MS.gene054948:intron 20.0%
!! AGCAAAAAAAAATGAGAAAT+CGG + chr3.1:76554470-76554489 MS.gene054948:intron 20.0%
!! ATATGTCAATAATCAAAAAC+TGG - chr3.1:76552678-76552697 None:intergenic 20.0%
!! ATGAAAGTTTGTAAATTAGT+TGG + chr3.1:76555433-76555452 MS.gene054948:intron 20.0%
!! TACTTTCTACACATATTTAT+AGG - chr3.1:76554535-76554554 None:intergenic 20.0%
!! TCAAAGATAACTAAAAAAAG+AGG - chr3.1:76554272-76554291 None:intergenic 20.0%
!!! ATCTCATTTGGAATTAAATA+AGG - chr3.1:76555846-76555865 None:intergenic 20.0%
!!! TATTGTATTCTGCATTTTTT+GGG + chr3.1:76555014-76555033 MS.gene054948:intron 20.0%
!!! TATTTGTTTTTTTGGAAACT+TGG + chr3.1:76553272-76553291 MS.gene054948:intron 20.0%
!!! TGCTTCTTAATTTATTTCTT+TGG - chr3.1:76555467-76555486 None:intergenic 20.0%
!!! TTTTTGTTAAAAAAGATTGG+GGG + chr3.1:76555141-76555160 MS.gene054948:intron 20.0%
! AAACTTTCATTTGCACAAAA+GGG - chr3.1:76555423-76555442 None:intergenic 25.0%
! GTACAAAATTCTTATGCATT+AGG + chr3.1:76554666-76554685 MS.gene054948:intron 25.0%
! TTACAAAGATAACAAAGAGA+AGG - chr3.1:76554838-76554857 None:intergenic 25.0%
! TTATATAAAACATCACACTC+TGG + chr3.1:76554314-76554333 MS.gene054948:intron 25.0%
! TTTGACTAACCATTAAAAAC+TGG + chr3.1:76555581-76555600 MS.gene054948:intron 25.0%
!! AAACAAAATTGATGATTCCA+GGG + chr3.1:76551989-76552008 MS.gene054948:CDS 25.0%
!! AATTCCAAATGAGATTTTTG+AGG + chr3.1:76555851-76555870 MS.gene054948:CDS 25.0%
!! TGTCATTTACTTCAGAAATA+TGG - chr3.1:76553902-76553921 None:intergenic 25.0%
!!! AGTTTTTAATGGTTAGTCAA+AGG - chr3.1:76555582-76555601 None:intergenic 25.0%
!!! CAAAAGTATTCTCTCAAAAA+AGG + chr3.1:76553463-76553482 MS.gene054948:intron 25.0%
!!! GTATTGTATTCTGCATTTTT+TGG + chr3.1:76555013-76555032 MS.gene054948:intron 25.0%
!!! GTTTTTAATGGTTAGTCAAA+GGG - chr3.1:76555581-76555600 None:intergenic 25.0%
!!! TGCATTTTTTGGGTATATTT+TGG + chr3.1:76555024-76555043 MS.gene054948:intron 25.0%
!!! TGGAATCATCAATTTTGTTT+CGG - chr3.1:76551989-76552008 None:intergenic 25.0%
!!! TTCTCATTTTTTTTTGCTAC+AGG - chr3.1:76554468-76554487 None:intergenic 25.0%
!!! TTTTTAATGGTTAGTCAAAG+GGG - chr3.1:76555580-76555599 None:intergenic 25.0%
!!! TTTTTTTTACGCCCTATTTT+TGG + chr3.1:76554804-76554823 MS.gene054948:intron 25.0%
AAATACCCTACAAATCACAT+AGG - chr3.1:76553730-76553749 None:intergenic 30.0%
AACAAAAGAGAGAGTAAGAT+TGG - chr3.1:76555506-76555525 None:intergenic 30.0%
AACCATTTAATGAGAAAGAC+TGG + chr3.1:76553793-76553812 MS.gene054948:CDS 30.0%
AACTTTCATTTGCACAAAAG+GGG - chr3.1:76555422-76555441 None:intergenic 30.0%
ACAAATGTCCAATGTTCTAA+TGG - chr3.1:76555108-76555127 None:intergenic 30.0%
ACACATATTTATAGGTCATG+TGG - chr3.1:76554527-76554546 None:intergenic 30.0%
ACCATTTAATGAGAAAGACT+GGG + chr3.1:76553794-76553813 MS.gene054948:CDS 30.0%
ACTAACCATTAAAAACTGGA+AGG + chr3.1:76555585-76555604 MS.gene054948:intron 30.0%
ACTTGGTATATTCTTAGTCT+GGG + chr3.1:76553618-76553637 MS.gene054948:intron 30.0%
AGAACAGTTAAGATAAAACC+AGG - chr3.1:76553682-76553701 None:intergenic 30.0%
ATAAACGAAAAGCTATTTGC+TGG + chr3.1:76555951-76555970 MS.gene054948:CDS 30.0%
ATAGGAAACTAAGACAAAAG+AGG - chr3.1:76555077-76555096 None:intergenic 30.0%
CAAACTTTCATTTGCACAAA+AGG - chr3.1:76555424-76555443 None:intergenic 30.0%
CACATATTTATAGGTCATGT+GGG - chr3.1:76554526-76554545 None:intergenic 30.0%
CTTTCTATCAGTTTGATCAT+TGG + chr3.1:76554958-76554977 MS.gene054948:intron 30.0%
GACAAAGCTGTTTATATCAA+AGG - chr3.1:76552866-76552885 None:intergenic 30.0%
GAGGAATTATGTTTACCAAT+TGG + chr3.1:76552551-76552570 MS.gene054948:intron 30.0%
GAGTTTAACATGAAAACACA+TGG - chr3.1:76552750-76552769 None:intergenic 30.0%
GATTGAACATAAGAATCAAG+TGG + chr3.1:76552389-76552408 MS.gene054948:CDS 30.0%
TAATGTATCCATTGTGTGTA+TGG + chr3.1:76552922-76552941 MS.gene054948:intron 30.0%
TAGTCTAACATTCATTACCT+AGG - chr3.1:76555271-76555290 None:intergenic 30.0%
TCTTGATAGACATGATAAAG+AGG - chr3.1:76553958-76553977 None:intergenic 30.0%
TGCAATATTTCTTTCCAACA+GGG - chr3.1:76552305-76552324 None:intergenic 30.0%
TGTTGGAAAGAAATATTGCA+CGG + chr3.1:76552305-76552324 MS.gene054948:CDS 30.0%
TTTGATCCTACTAATCAAGA+TGG + chr3.1:76555626-76555645 MS.gene054948:intron 30.0%
! ATGTATCACGTGTTATTAGA+AGG + chr3.1:76554726-76554745 MS.gene054948:intron 30.0%
! CCAACAAAAGCTGTAATTTT+AGG - chr3.1:76552708-76552727 None:intergenic 30.0%
! CCTAAAATTACAGCTTTTGT+TGG + chr3.1:76552705-76552724 MS.gene054948:intron 30.0%
! CTTTGAAAAAAATGGAAGGA+TGG + chr3.1:76553194-76553213 MS.gene054948:intron 30.0%
! GAAACAAAATTGATGATTCC+AGG + chr3.1:76551988-76552007 MS.gene054948:CDS 30.0%
! GATTTGTAGGGTATTTCAAA+AGG + chr3.1:76553734-76553753 MS.gene054948:CDS 30.0%
! TTTCTCAAGAGGAAGATTTT+GGG + chr3.1:76552051-76552070 MS.gene054948:CDS 30.0%
! TTTTCTCAAGAGGAAGATTT+TGG + chr3.1:76552050-76552069 MS.gene054948:CDS 30.0%
!! ATTTTCATCTTTTTGGCCAT+AGG - chr3.1:76555928-76555947 None:intergenic 30.0%
!! CTTACTCTCTCTTTTGTTTA+GGG + chr3.1:76555508-76555527 MS.gene054948:intron 30.0%
!! GTTTTAAGCTTTTTGTCTGT+CGG + chr3.1:76552167-76552186 MS.gene054948:intron 30.0%
!! TCTTACTCTCTCTTTTGTTT+AGG + chr3.1:76555507-76555526 MS.gene054948:intron 30.0%
!! TGGTAATGTATTTTCTCAAG+AGG + chr3.1:76552040-76552059 MS.gene054948:CDS 30.0%
!!! ATTGTATTGGAGGAGTATTT+TGG + chr3.1:76553344-76553363 MS.gene054948:intron 30.0%
!!! TAGGAACAATTTTTTCCCAA+AGG + chr3.1:76553124-76553143 MS.gene054948:intron 30.0%
!!! TTTTTTGGAAACTTGGTATC+CGG + chr3.1:76553279-76553298 MS.gene054948:intron 30.0%
!!! TTTTTTTCTGATTGTTCTCC+TGG + chr3.1:76553661-76553680 MS.gene054948:intron 30.0%
AAAAAAATGGAAGGATGGAG+TGG + chr3.1:76553199-76553218 MS.gene054948:intron 35.0%
AAATGACTGTTCACCAGAAA+TGG - chr3.1:76554787-76554806 None:intergenic 35.0%
AACATAAGAATCAAGTGGTG+GGG + chr3.1:76552394-76552413 MS.gene054948:CDS 35.0%
AACTAAACCCCTCCTAATTT+GGG + chr3.1:76553312-76553331 MS.gene054948:intron 35.0%
AAGATAACAAAGAGAAGGAG+AGG - chr3.1:76554833-76554852 None:intergenic 35.0%
AAGCAACTCAAAGAAATCAG+GGG - chr3.1:76556000-76556019 None:intergenic 35.0%
ACATTTACAAGTATGCTCCA+TGG + chr3.1:76552109-76552128 MS.gene054948:CDS 35.0%
AGGTATGACATCTTTGAATG+AGG + chr3.1:76552532-76552551 MS.gene054948:intron 35.0%
AGGTCCTCAAAAATCTCATT+TGG - chr3.1:76555858-76555877 None:intergenic 35.0%
AGTAACATCCATACACACAA+TGG - chr3.1:76552933-76552952 None:intergenic 35.0%
AGTCTTAACAGTAGCATAAG+TGG - chr3.1:76554924-76554943 None:intergenic 35.0%
AGTTCAGCAATGACATGAAA+AGG - chr3.1:76552087-76552106 None:intergenic 35.0%
ATATGACTACCTCCAATATC+TGG + chr3.1:76554754-76554773 MS.gene054948:intron 35.0%
ATGTGATTATGTTCGACAGA+AGG + chr3.1:76555782-76555801 MS.gene054948:intron 35.0%
ATTCAAAGATGTCATACCTG+TGG - chr3.1:76552531-76552550 None:intergenic 35.0%
CAAGCAACTCAAAGAAATCA+GGG - chr3.1:76556001-76556020 None:intergenic 35.0%
CATTTACAAGTATGCTCCAT+GGG + chr3.1:76552110-76552129 MS.gene054948:CDS 35.0%
CCTAAAGAGGACTTGTATTA+GGG + chr3.1:76553558-76553577 MS.gene054948:intron 35.0%
CCTAATACAAGTCCTCTTTA+GGG - chr3.1:76553560-76553579 None:intergenic 35.0%
CTCAAGCTGTAAATGATTCA+TGG + chr3.1:76552767-76552786 MS.gene054948:intron 35.0%
CTTCGTTGTTATATTGGACT+TGG + chr3.1:76555369-76555388 MS.gene054948:intron 35.0%
GAACATAAGAATCAAGTGGT+GGG + chr3.1:76552393-76552412 MS.gene054948:CDS 35.0%
GAATGAAAACAATGGATCTG+AGG + chr3.1:76554082-76554101 MS.gene054948:CDS 35.0%
GATAAATCTTTGCTCAAGAG+TGG + chr3.1:76552255-76552274 MS.gene054948:intron 35.0%
GCAATATTTCTTTCCAACAG+GGG - chr3.1:76552304-76552323 None:intergenic 35.0%
GTGCAATATTTCTTTCCAAC+AGG - chr3.1:76552306-76552325 None:intergenic 35.0%
GTTCAGCAATGACATGAAAA+GGG - chr3.1:76552086-76552105 None:intergenic 35.0%
GTTGGAAAGAAATATTGCAC+GGG + chr3.1:76552306-76552325 MS.gene054948:CDS 35.0%
TATTAACAGCTTGGTTGGAT+TGG + chr3.1:76555884-76555903 MS.gene054948:CDS 35.0%
TCAAGCAACTCAAAGAAATC+AGG - chr3.1:76556002-76556021 None:intergenic 35.0%
TCCCAGTCTTTCTCATTAAA+TGG - chr3.1:76553798-76553817 None:intergenic 35.0%
TGAACATAAGAATCAAGTGG+TGG + chr3.1:76552392-76552411 MS.gene054948:CDS 35.0%
TGCAAGTGCAATTAATCAGA+AGG - chr3.1:76555201-76555220 None:intergenic 35.0%
TGCTATCTTTCATTTGCTCT+CGG + chr3.1:76554869-76554888 MS.gene054948:intron 35.0%
TGTCTGCTTCGTTGTTATAT+TGG + chr3.1:76555363-76555382 MS.gene054948:intron 35.0%
TTAAATGTTCTACATGGCCT+AGG + chr3.1:76555251-76555270 MS.gene054948:intron 35.0%
TTTCGACGATGAAAATGCAT+TGG + chr3.1:76554055-76554074 MS.gene054948:CDS 35.0%
! AATTTGAGTTCCCCCAAATT+AGG - chr3.1:76553327-76553346 None:intergenic 35.0%
! AGAACTCCTATGTGATTTGT+AGG + chr3.1:76553721-76553740 MS.gene054948:intron 35.0%
! AGATCCATTGTTTTCATTCC+CGG - chr3.1:76554081-76554100 None:intergenic 35.0%
! GAACTCCTATGTGATTTGTA+GGG + chr3.1:76553722-76553741 MS.gene054948:intron 35.0%
! GACTTGGTATATTCTTAGTC+TGG + chr3.1:76553617-76553636 MS.gene054948:intron 35.0%
! GCACTTTTAGTGTTATGCAA+GGG + chr3.1:76554377-76554396 MS.gene054948:intron 35.0%
! TGTAGGGTATTTCAAAAGGA+AGG + chr3.1:76553738-76553757 MS.gene054948:CDS 35.0%
! TTATAGGTCATGTGGGTTTT+GGG - chr3.1:76554519-76554538 None:intergenic 35.0%
! TTCAGCCTTCCAGTTTTTAA+TGG - chr3.1:76555593-76555612 None:intergenic 35.0%
! TTTATAGGTCATGTGGGTTT+TGG - chr3.1:76554520-76554539 None:intergenic 35.0%
!! AAATGAGATTTTTGAGGACC+TGG + chr3.1:76555857-76555876 MS.gene054948:CDS 35.0%
!! AATGAGATTTTTGAGGACCT+GGG + chr3.1:76555858-76555877 MS.gene054948:CDS 35.0%
!! AGGGCTTTGAAAAAAATGGA+AGG + chr3.1:76553190-76553209 MS.gene054948:intron 35.0%
!! TCATTGGTCTTAACATATGC+TGG + chr3.1:76554974-76554993 MS.gene054948:intron 35.0%
!! TGTTTTGTTGGATGTACGTA+TGG + chr3.1:76552582-76552601 MS.gene054948:intron 35.0%
!!! ATTTTTTCCCAAAGGTCTGT+TGG + chr3.1:76553132-76553151 MS.gene054948:intron 35.0%
!!! TATTGGAGGAGTATTTTGGA+GGG + chr3.1:76553348-76553367 MS.gene054948:intron 35.0%
!!! TTGACTGTTTTAGCATGACT+TGG + chr3.1:76553601-76553620 MS.gene054948:intron 35.0%
!!! TTTTTTCCCAAAGGTCTGTT+GGG + chr3.1:76553133-76553152 MS.gene054948:intron 35.0%
AAAAAGAGGAACAGTTCACG+AGG - chr3.1:76554258-76554277 None:intergenic 40.0%
AAAGTCAGAGCTACCAAAGT+TGG - chr3.1:76554166-76554185 None:intergenic 40.0%
AAGGAGAGGTTGCCAAAAAT+AGG - chr3.1:76554819-76554838 None:intergenic 40.0%
AAGTCAGAGCTACCAAAGTT+GGG - chr3.1:76554165-76554184 None:intergenic 40.0%
AATGGAAGCTTGCCAGATAT+TGG - chr3.1:76554769-76554788 None:intergenic 40.0%
ACCAATCTCATCACCAACAA+TGG + chr3.1:76554425-76554444 MS.gene054948:intron 40.0%
ACTAAACCCCTCCTAATTTG+GGG + chr3.1:76553313-76553332 MS.gene054948:intron 40.0%
ACTCACTCCAAAGTGATTAG+TGG + chr3.1:76555225-76555244 MS.gene054948:intron 40.0%
AGCAACTCAAAGAAATCAGG+GGG - chr3.1:76555999-76556018 None:intergenic 40.0%
AGGAGAGGTTGCCAAAAATA+GGG - chr3.1:76554818-76554837 None:intergenic 40.0%
AGTTTCGTTGAATCCAAACC+TGG - chr3.1:76552141-76552160 None:intergenic 40.0%
ATCGTCGAAAATAGCAAGCA+TGG - chr3.1:76554045-76554064 None:intergenic 40.0%
ATTACCAGCTCAACATCAGT+GGG - chr3.1:76552027-76552046 None:intergenic 40.0%
CAAAACAGTTCGCAACCAAT+TGG - chr3.1:76552569-76552588 None:intergenic 40.0%
CAAATTAGGAGGGGTTTAGT+TGG - chr3.1:76553313-76553332 None:intergenic 40.0%
CAACTAAACCCCTCCTAATT+TGG + chr3.1:76553311-76553330 MS.gene054948:intron 40.0%
CATGCATAACCCAATCAGTT+CGG - chr3.1:76552467-76552486 None:intergenic 40.0%
CCCTAAAGAGGACTTGTATT+AGG + chr3.1:76553557-76553576 MS.gene054948:intron 40.0%
CCCTAATACAAGTCCTCTTT+AGG - chr3.1:76553561-76553580 None:intergenic 40.0%
CGTTGTTATATTGGACTTGG+TGG + chr3.1:76555372-76555391 MS.gene054948:intron 40.0%
CTCACTCCAAAGTGATTAGT+GGG + chr3.1:76555226-76555245 MS.gene054948:intron 40.0%
GAAAGAAATATTGCACGGGA+GGG + chr3.1:76552310-76552329 MS.gene054948:CDS 40.0%
GAGAGCAAATGAAAGATAGC+AGG - chr3.1:76554870-76554889 None:intergenic 40.0%
GATGTACGTATGGCGTTTAA+TGG + chr3.1:76552592-76552611 MS.gene054948:intron 40.0%
GGAAACTAAGACAAAAGAGG+TGG - chr3.1:76555074-76555093 None:intergenic 40.0%
GGACAGTGAGAGTAATAAGA+TGG - chr3.1:76552845-76552864 None:intergenic 40.0%
GGAGATATTAACAGCTTGGT+TGG + chr3.1:76555879-76555898 MS.gene054948:CDS 40.0%
GGGAACTCAAATTGTATTGG+AGG + chr3.1:76553334-76553353 MS.gene054948:intron 40.0%
GTATTTCAAAAGGAAGGTCC+TGG + chr3.1:76553744-76553763 MS.gene054948:CDS 40.0%
TAAAGGAGACCGAACTGATT+GGG + chr3.1:76552455-76552474 MS.gene054948:CDS 40.0%
TCACTCCAAAGTGATTAGTG+GGG + chr3.1:76555227-76555246 MS.gene054948:intron 40.0%
TCAGAAATATGGCTTGAGCT+AGG - chr3.1:76553891-76553910 None:intergenic 40.0%
TCCAATGTTCTAATGGCAGA+TGG - chr3.1:76555101-76555120 None:intergenic 40.0%
TGCTGAATTGCATGACACAT+TGG + chr3.1:76554355-76554374 MS.gene054948:intron 40.0%
TGGCTTTCACGTGTAACAAA+GGG - chr3.1:76552658-76552677 None:intergenic 40.0%
TGGGGCTTAAATGTTCTACA+TGG + chr3.1:76555245-76555264 MS.gene054948:intron 40.0%
TGGGGGAACTCAAATTGTAT+TGG + chr3.1:76553331-76553350 MS.gene054948:intron 40.0%
TGTTTAGTCTGCCAGGATAA+TGG - chr3.1:76556035-76556054 None:intergenic 40.0%
TTAAGCCCCACTAATCACTT+TGG - chr3.1:76555235-76555254 None:intergenic 40.0%
! AAGGAATGAAGAGGTTTGGT+AGG + chr3.1:76553222-76553241 MS.gene054948:intron 40.0%
! AGGAATGAAGAGGTTTGGTA+GGG + chr3.1:76553223-76553242 MS.gene054948:intron 40.0%
! GGCACTTTTAGTGTTATGCA+AGG + chr3.1:76554376-76554395 MS.gene054948:intron 40.0%
! TCAAGAGTGGTGATTTGCAA+TGG + chr3.1:76552268-76552287 MS.gene054948:CDS 40.0%
! TTGGTTGCGAACTGTTTTGT+TGG + chr3.1:76552570-76552589 MS.gene054948:intron 40.0%
! TTTTTCCCAAAGGTCTGTTG+GGG + chr3.1:76553134-76553153 MS.gene054948:intron 40.0%
!! ACTCTCTCTTTTGTTTAGGG+AGG + chr3.1:76555511-76555530 MS.gene054948:intron 40.0%
!! CTCTCTCTTTTGTTTAGGGA+GGG + chr3.1:76555512-76555531 MS.gene054948:intron 40.0%
!! GGAGAGGGCTTTGAAAAAAA+TGG + chr3.1:76553186-76553205 MS.gene054948:intron 40.0%
!!! AGGAGTATTTTGGAGGGTTT+TGG + chr3.1:76553354-76553373 MS.gene054948:intron 40.0%
!!! GTATTGGAGGAGTATTTTGG+AGG + chr3.1:76553347-76553366 MS.gene054948:intron 40.0%
AAAAGATTGGGGGCAAGAAG+TGG + chr3.1:76555151-76555170 MS.gene054948:intron 45.0%
AAATGGAAGGATGGAGTGGA+AGG + chr3.1:76553203-76553222 MS.gene054948:intron 45.0%
AGAAATCGGATCATGAGCCA+TGG + chr3.1:76554484-76554503 MS.gene054948:intron 45.0%
AGCAAGAATGGTAACCACCA+TGG - chr3.1:76554403-76554422 None:intergenic 45.0%
AGTCAGAGCTACCAAAGTTG+GGG - chr3.1:76554164-76554183 None:intergenic 45.0%
ATCTGGCAAGCTTCCATTTC+TGG + chr3.1:76554771-76554790 MS.gene054948:intron 45.0%
ATGAATCGGGCAACAGAAGT+AGG + chr3.1:76552336-76552355 MS.gene054948:CDS 45.0%
ATGGAGTGGAAGGAATGAAG+AGG + chr3.1:76553213-76553232 MS.gene054948:intron 45.0%
CAATCAGTTCGGTCTCCTTT+AGG - chr3.1:76552456-76552475 None:intergenic 45.0%
CATCTGAACAGACCCTAAAG+AGG + chr3.1:76553545-76553564 MS.gene054948:intron 45.0%
CATTACCAGCTCAACATCAG+TGG - chr3.1:76552028-76552047 None:intergenic 45.0%
CCAAGCTGTTAATATCTCCC+AGG - chr3.1:76555878-76555897 None:intergenic 45.0%
CCAATACATCCACTTGCAGA+GGG - chr3.1:76553930-76553949 None:intergenic 45.0%
CCTACTAATCAAGATGGCAG+AGG + chr3.1:76555632-76555651 MS.gene054948:intron 45.0%
CCTCTGCCATCTTGATTAGT+AGG - chr3.1:76555635-76555654 None:intergenic 45.0%
CCTGGGAGATATTAACAGCT+TGG + chr3.1:76555875-76555894 MS.gene054948:CDS 45.0%
CTAAACCCCTCCTAATTTGG+GGG + chr3.1:76553314-76553333 MS.gene054948:intron 45.0%
CTAAAGGAGACCGAACTGAT+TGG + chr3.1:76552454-76552473 MS.gene054948:CDS 45.0%
CTATCAAGATTGATGCCCTC+TGG + chr3.1:76553969-76553988 MS.gene054948:CDS 45.0%
CTTGATTGCCTAGAGCTGAA+GGG - chr3.1:76554004-76554023 None:intergenic 45.0%
GACAAAGACCTAGCTGACAA+TGG + chr3.1:76552501-76552520 MS.gene054948:CDS 45.0%
GCAACTCAAAGAAATCAGGG+GGG - chr3.1:76555998-76556017 None:intergenic 45.0%
GCCATCTGCCATTAGAACAT+TGG + chr3.1:76555097-76555116 MS.gene054948:intron 45.0%
GGAAAGAAATATTGCACGGG+AGG + chr3.1:76552309-76552328 MS.gene054948:CDS 45.0%
GGTCTGTTCAGATGTTTCGA+GGG - chr3.1:76553539-76553558 None:intergenic 45.0%
GTCTGTTCAGATGTTTCGAG+GGG - chr3.1:76553538-76553557 None:intergenic 45.0%
GTGGAAGGAATGAAGAGGTT+TGG + chr3.1:76553218-76553237 MS.gene054948:intron 45.0%
GTTCTAATGGCAGATGGCAT+AGG - chr3.1:76555095-76555114 None:intergenic 45.0%
TCCAATACATCCACTTGCAG+AGG - chr3.1:76553931-76553950 None:intergenic 45.0%
TCCTGGCAGACTAAACATGA+TGG + chr3.1:76556038-76556057 MS.gene054948:CDS 45.0%
TGAATCGGGCAACAGAAGTA+GGG + chr3.1:76552337-76552356 MS.gene054948:CDS 45.0%
TGAGATTGGTGCAGCAAGAA+TGG - chr3.1:76554415-76554434 None:intergenic 45.0%
TGAGTTCCCCCAAATTAGGA+GGG - chr3.1:76553323-76553342 None:intergenic 45.0%
TGGTACTTCTTTACCCCTGT+TGG + chr3.1:76552288-76552307 MS.gene054948:CDS 45.0%
TTACCAGCTCAACATCAGTG+GGG - chr3.1:76552026-76552045 None:intergenic 45.0%
TTAGTGTTATGCAAGGGCCA+TGG + chr3.1:76554383-76554402 MS.gene054948:intron 45.0%
TTGAGTTCCCCCAAATTAGG+AGG - chr3.1:76553324-76553343 None:intergenic 45.0%
TTGGCCGGGAATGAAAACAA+TGG + chr3.1:76554074-76554093 MS.gene054948:CDS 45.0%
TTGGGGGCTTATGGAGTTAT+GGG + chr3.1:76553151-76553170 MS.gene054948:intron 45.0%
TTTGCACAAAAGGGGTAGCA+AGG - chr3.1:76555414-76555433 None:intergenic 45.0%
TTTGCCAGTGTGAAACACCA+GGG - chr3.1:76552430-76552449 None:intergenic 45.0%
! AAGCACGCACGAAGTATCTA+CGG - chr3.1:76552793-76552812 None:intergenic 45.0%
! ACATATGCTGGCAGTGCTTT+TGG + chr3.1:76554986-76555005 MS.gene054948:intron 45.0%
! ACGATGAAAATGCATTGGCC+GGG + chr3.1:76554060-76554079 MS.gene054948:CDS 45.0%
! AGCTTGGTTGGATTGGATGA+TGG + chr3.1:76555891-76555910 MS.gene054948:CDS 45.0%
! CGTGCTTACATAGCATTGAG+TGG + chr3.1:76552806-76552825 MS.gene054948:intron 45.0%
! CTGGCTTTCACGTGTAACAA+AGG - chr3.1:76552659-76552678 None:intergenic 45.0%
! GACGATGAAAATGCATTGGC+CGG + chr3.1:76554059-76554078 MS.gene054948:CDS 45.0%
! GATGGAAGCGGTTTTTCCTA+TGG + chr3.1:76555909-76555928 MS.gene054948:CDS 45.0%
! GGAATGAAGAGGTTTGGTAG+GGG + chr3.1:76553224-76553243 MS.gene054948:intron 45.0%
! TTTTCCCAAAGGTCTGTTGG+GGG + chr3.1:76553135-76553154 MS.gene054948:intron 45.0%
! TTTTCCTGCCTTCGACTAGA+AGG - chr3.1:76555177-76555196 None:intergenic 45.0%
!! CAGTAGCATAAGTGGACTAG+TGG - chr3.1:76554916-76554935 None:intergenic 45.0%
!! CGACAGAAGGTTGATAATCC+TGG + chr3.1:76555795-76555814 MS.gene054948:intron 45.0%
!! CTTTGAGTTGCTTGACCTAG+AGG + chr3.1:76556007-76556026 MS.gene054948:CDS 45.0%
!! CTTTTGTTTAGGGAGGGTGA+AGG + chr3.1:76555518-76555537 MS.gene054948:intron 45.0%
!! GCCATTGTTGGTGATGAGAT+TGG - chr3.1:76554429-76554448 None:intergenic 45.0%
!! GTTGGATTGGATGATGGAAG+CGG + chr3.1:76555897-76555916 MS.gene054948:CDS 45.0%
!! TAGCATAAGTGGACTAGTGG+AGG - chr3.1:76554913-76554932 None:intergenic 45.0%
!! TAGGGTACTGGAAGACTACA+GGG + chr3.1:76552355-76552374 MS.gene054948:CDS 45.0%
!! AATTATTATTAGTATTAATA+AGG + chr3.1:76553045-76553064 MS.gene054948:intron 5.0%
!! ATTATTATTAGTATTAATAA+GGG + chr3.1:76553046-76553065 MS.gene054948:intron 5.0%
AAAGGTCTGTTGGGGGCTTA+TGG + chr3.1:76553142-76553161 MS.gene054948:intron 50.0%
AGAAATATTGCACGGGAGGG+AGG + chr3.1:76552313-76552332 MS.gene054948:CDS 50.0%
AGAACCCTGGTGTTTCACAC+TGG + chr3.1:76552423-76552442 MS.gene054948:CDS 50.0%
AGAAGTGGCCTTCTAGTCGA+AGG + chr3.1:76555166-76555185 MS.gene054948:intron 50.0%
AGCTGACAATGGTGTTCCAC+AGG + chr3.1:76552512-76552531 MS.gene054948:CDS 50.0%
ATAAGCCCCCAACAGACCTT+TGG - chr3.1:76553143-76553162 None:intergenic 50.0%
ATGACACACCCTTCAGCTCT+AGG + chr3.1:76553993-76554012 MS.gene054948:CDS 50.0%
CAATCTGCCATCGCCATTGT+TGG - chr3.1:76554441-76554460 None:intergenic 50.0%
CACACTGGCAAAGCTCCTAA+AGG + chr3.1:76552438-76552457 MS.gene054948:CDS 50.0%
CCATACTGTGCACCATTCCT+GGG - chr3.1:76553771-76553790 None:intergenic 50.0%
CCCTCTGCAAGTGGATGTAT+TGG + chr3.1:76553927-76553946 MS.gene054948:CDS 50.0%
CTCATCACCAACAATGGCGA+TGG + chr3.1:76554431-76554450 MS.gene054948:intron 50.0%
CTTATGGAGTTATGGGGGAG+GGG + chr3.1:76553158-76553177 MS.gene054948:intron 50.0%
CTTTGCCAGTGTGAAACACC+AGG - chr3.1:76552431-76552450 None:intergenic 50.0%
GAAAGACTGGGATAGCGAAG+AGG + chr3.1:76553806-76553825 MS.gene054948:CDS 50.0%
GAGCTAGGTAGAATGAGAGC+TGG - chr3.1:76553876-76553895 None:intergenic 50.0%
GAGGGGTTTAGTTGGTCCTT+GGG - chr3.1:76553305-76553324 None:intergenic 50.0%
GAGTTCCCCCAAATTAGGAG+GGG - chr3.1:76553322-76553341 None:intergenic 50.0%
GCCATCATGTTTAGTCTGCC+AGG - chr3.1:76556042-76556061 None:intergenic 50.0%
GCTTATGGAGTTATGGGGGA+GGG + chr3.1:76553157-76553176 MS.gene054948:intron 50.0%
GCTTGATTGCCTAGAGCTGA+AGG - chr3.1:76554005-76554024 None:intergenic 50.0%
GGAAGACTACAGGGAAGGAT+AGG + chr3.1:76552364-76552383 MS.gene054948:CDS 50.0%
GGAAGCTTGCCAGATATTGG+AGG - chr3.1:76554766-76554785 None:intergenic 50.0%
GGGTCTGTTCAGATGTTTCG+AGG - chr3.1:76553540-76553559 None:intergenic 50.0%
GGTCAAGCAAACAACGCTGA+AGG + chr3.1:76555816-76555835 MS.gene054948:CDS 50.0%
GTACTGGAAGACTACAGGGA+AGG + chr3.1:76552359-76552378 MS.gene054948:CDS 50.0%
GTGGAACACCATTGTCAGCT+AGG - chr3.1:76552512-76552531 None:intergenic 50.0%
GTTGGGGGCTTATGGAGTTA+TGG + chr3.1:76553150-76553169 MS.gene054948:intron 50.0%
TAAGCCCCCAACAGACCTTT+GGG - chr3.1:76553142-76553161 None:intergenic 50.0%
TATGCTCCATGGGATCTACC+AGG + chr3.1:76552120-76552139 MS.gene054948:CDS 50.0%
TCAGCGTTGTTTGCTTGACC+AGG - chr3.1:76555816-76555835 None:intergenic 50.0%
TCCAAACCTGGTAGATCCCA+TGG - chr3.1:76552129-76552148 None:intergenic 50.0%
TCCATACTGTGCACCATTCC+TGG - chr3.1:76553772-76553791 None:intergenic 50.0%
TCCATGGGATCTACCAGGTT+TGG + chr3.1:76552125-76552144 MS.gene054948:intron 50.0%
TGGGGGCTTATGGAGTTATG+GGG + chr3.1:76553152-76553171 MS.gene054948:intron 50.0%
TTCAGATGTTTCGAGGGGAG+AGG - chr3.1:76553533-76553552 None:intergenic 50.0%
! ATGAAGAGGTTTGGTAGGGG+AGG + chr3.1:76553227-76553246 MS.gene054948:intron 50.0%
! TGAAGAGGTTTGGTAGGGGA+GGG + chr3.1:76553228-76553247 MS.gene054948:intron 50.0%
!! ACCTAGAGGTGCCATTATCC+TGG + chr3.1:76556021-76556040 MS.gene054948:CDS 50.0%
!! GTAGGGTACTGGAAGACTAC+AGG + chr3.1:76552354-76552373 MS.gene054948:CDS 50.0%
!! GTTTTGGGTCTGTCTAGCCA+TGG - chr3.1:76554504-76554523 None:intergenic 50.0%
!! TACCAAAGTTGGGGAGCATC+TGG - chr3.1:76554155-76554174 None:intergenic 50.0%
AAAAGGAAGGTCCTGGTCCC+AGG + chr3.1:76553751-76553770 MS.gene054948:CDS 55.0%
CCCAGGAATGGTGCACAGTA+TGG + chr3.1:76553768-76553787 MS.gene054948:CDS 55.0%
GAAACTTGGTATCCGGCCCA+AGG + chr3.1:76553286-76553305 MS.gene054948:intron 55.0%
GACATGCATCCCTCTGCAAG+TGG + chr3.1:76553918-76553937 MS.gene054948:CDS 55.0%
GATGTTTCGAGGGGAGAGGA+TGG - chr3.1:76553529-76553548 None:intergenic 55.0%
GGAGGGGTTTAGTTGGTCCT+TGG - chr3.1:76553306-76553325 None:intergenic 55.0%
GGCTTATGGAGTTATGGGGG+AGG + chr3.1:76553156-76553175 MS.gene054948:intron 55.0%
GGGCAACAGAAGTAGGGTAC+TGG + chr3.1:76552343-76552362 MS.gene054948:CDS 55.0%
GGGGGCTTATGGAGTTATGG+GGG + chr3.1:76553153-76553172 MS.gene054948:intron 55.0%
GGTGGGGATGATAAGAACCC+TGG + chr3.1:76552410-76552429 MS.gene054948:CDS 55.0%
GGTTTAGTTGGTCCTTGGGC+CGG - chr3.1:76553301-76553320 None:intergenic 55.0%
GTGCAGACACAGCAGCAACA+GGG - chr3.1:76553854-76553873 None:intergenic 55.0%
GTGGGGTGAAAACGAAACCC+TGG - chr3.1:76552009-76552028 None:intergenic 55.0%
GTGTTATGCAAGGGCCATGG+TGG + chr3.1:76554386-76554405 MS.gene054948:intron 55.0%
GTTTGGTAGGGGAGGGCTTT+GGG + chr3.1:76553235-76553254 MS.gene054948:intron 55.0%
TCACCCCACTGATGTTGAGC+TGG + chr3.1:76552020-76552039 MS.gene054948:CDS 55.0%
TGCCAGATGCTCCCCAACTT+TGG + chr3.1:76554150-76554169 MS.gene054948:intron 55.0%
TTTGGTAGGGGAGGGCTTTG+GGG + chr3.1:76553236-76553255 MS.gene054948:intron 55.0%
! GAAGGGTGTGTCATGCCAGA+GGG - chr3.1:76553987-76554006 None:intergenic 55.0%
! GCCAGGATAATGGCACCTCT+AGG - chr3.1:76556025-76556044 None:intergenic 55.0%
! TGAAGGGTGTGTCATGCCAG+AGG - chr3.1:76553988-76554007 None:intergenic 55.0%
AGTTATGGGGGAGGGGAGAG+AGG + chr3.1:76553165-76553184 MS.gene054948:intron 60.0%
CACGGGAGGGAGGATGAATC+GGG + chr3.1:76552323-76552342 MS.gene054948:CDS 60.0%
CGAGGGGAGAGGATGGCTTT+GGG - chr3.1:76553522-76553541 None:intergenic 60.0%
GAAGGTCCTGGTCCCAGGAA+TGG + chr3.1:76553756-76553775 MS.gene054948:CDS 60.0%
GCACGGGAGGGAGGATGAAT+CGG + chr3.1:76552322-76552341 MS.gene054948:CDS 60.0%
GGTGCAGACACAGCAGCAAC+AGG - chr3.1:76553855-76553874 None:intergenic 60.0%
GTGGCCTTCTAGTCGAAGGC+AGG + chr3.1:76555170-76555189 MS.gene054948:intron 60.0%
TCGAGGGGAGAGGATGGCTT+TGG - chr3.1:76553523-76553542 None:intergenic 60.0%
TGTGCACCATTCCTGGGACC+AGG - chr3.1:76553765-76553784 None:intergenic 60.0%
! GGTTTGGTAGGGGAGGGCTT+TGG + chr3.1:76553234-76553253 MS.gene054948:intron 60.0%
!! GAGAGGATGGCTTTGGGAGC+AGG - chr3.1:76553516-76553535 None:intergenic 60.0%
GGGGGAGGGGAGAGAGGAGA+GGG + chr3.1:76553171-76553190 MS.gene054948:intron 70.0%
TGGGGGAGGGGAGAGAGGAG+AGG + chr3.1:76553170-76553189 MS.gene054948:intron 70.0%


Chromosome Type Strat End Strand Name
chr3.1 gene 76551982 76556064 76551982 ID=MS.gene054948
chr3.1 mRNA 76551982 76556064 76551982 ID=MS.gene054948.t1;Parent=MS.gene054948
chr3.1 exon 76551982 76552141 76551982 ID=MS.gene054948.t1.exon1;Parent=MS.gene054948.t1
chr3.1 CDS 76551982 76552141 76551982 ID=cds.MS.gene054948.t1;Parent=MS.gene054948.t1
chr3.1 exon 76552256 76552533 76552256 ID=MS.gene054948.t1.exon2;Parent=MS.gene054948.t1
chr3.1 CDS 76552256 76552533 76552256 ID=cds.MS.gene054948.t1;Parent=MS.gene054948.t1
chr3.1 exon 76553723 76554103 76553723 ID=MS.gene054948.t1.exon3;Parent=MS.gene054948.t1
chr3.1 CDS 76553723 76554103 76553723 ID=cds.MS.gene054948.t1;Parent=MS.gene054948.t1
chr3.1 exon 76555801 76556064 76555801 ID=MS.gene054948.t1.exon4;Parent=MS.gene054948.t1
chr3.1 CDS 76555801 76556064 76555801 ID=cds.MS.gene054948.t1;Parent=MS.gene054948.t1
Gene Sequence

>MS.gene054948

ATGGCCGAAACAAAATTGATGATTCCAGGGTTTCGTTTTCACCCCACTGATGTTGAGCTGGTAATGTATTTTCTCAAGAGGAAGATTTTGGGTAGAAAATTCCCTTTTCATGTCATTGCTGAACTTGACATTTACAAGTATGCTCCATGGGATCTACCAGGTTTGGATTCAACGAAACTCGACTAGTTTTAAGCTTTTTGTCTGTCGGTGAAGTATTTTAGTAGTAAGTACATTTGTGTTTCTCTGATGTTTTGTTTATTGTTTTATTTTTCAGATAAATCTTTGCTCAAGAGTGGTGATTTGCAATGGTACTTCTTTACCCCTGTTGGAAAGAAATATTGCACGGGAGGGAGGATGAATCGGGCAACAGAAGTAGGGTACTGGAAGACTACAGGGAAGGATAGGTCGATTGAACATAAGAATCAAGTGGTGGGGATGATAAGAACCCTGGTGTTTCACACTGGCAAAGCTCCTAAAGGAGACCGAACTGATTGGGTTATGCATGAATACAGACTCGAAGACAAAGACCTAGCTGACAATGGTGTTCCACAGGTATGACATCTTTGAATGAGGAATTATGTTTACCAATTGGTTGCGAACTGTTTTGTTGGATGTACGTATGGCGTTTAATGGTCTGTGCACGTGATGTCTAGTACTGTTGCTGCTATTATTGCCCTTTGTTACACGTGAAAGCCAGTTTTTGATTATTGACATATTTCAATACCTAAAATTACAGCTTTTGTTGGATATGACATCATAGTAGAACCATGTGTTTTCATGTTAAACTCAAGCTGTAAATGATTCATGGCCGTAGATACTTCGTGCGTGCTTACATAGCATTGAGTGGCAGCTTTGTTTTGCCATCTTATTACTCTCACTGTCCTTTGATATAAACAGCTTTGTCATTTTCATATATATTAAGAAAAGTAAATAGTGTATTTAATGTATCCATTGTGTGTATGGATGTTACTAAAATGCACTTTTGCGTATAGACATGTCTATCTCTGACATGTTATCTCCCTAAGACAAATTATTATTAGTATTAACAAGGGGCCCTAAGACAAATTATTATTAGTATTAATAAGGGGTATATTAAAAAACTAAAAATAATGTATCTATTAATTTGAAATAAGACTTATATTTAGGAACAATTTTTTCCCAAAGGTCTGTTGGGGGCTTATGGAGTTATGGGGGAGGGGAGAGAGGAGAGGGCTTTGAAAAAAATGGAAGGATGGAGTGGAAGGAATGAAGAGGTTTGGTAGGGGAGGGCTTTGGGGAGTTTATTTCTCTTATTTGTTTTTTTGGAAACTTGGTATCCGGCCCAAGGACCAACTAAACCCCTCCTAATTTGGGGGAACTCAAATTGTATTGGAGGAGTATTTTGGAGGGTTTTGGTAAATTCTTCAAATCAATTCTAAGTTGTTACAATACTCTTAAAATCAGCAATATATTAATCACAAGCAATCATTTATCATTCTATACAAAAGTATTCTCTCAAAAAAGGTGTAACATCTCTCTATTTATTTATTCACCTGCTCCCAAAGCCATCCTCTCCCCTCGAAACATCTGAACAGACCCTAAAGAGGACTTGTATTAGGGACAGCGATAGTACTATGCATTTGACTGTTTTAGCATGACTTGGTATATTCTTAGTCTGGGTTGTTGACTCTCTGTCTCATTTTTTTTCTGATTGTTCTCCTGGTTTTATCTTAACTGTTCTACTGATTTATTTGTATTGCAGAACTCCTATGTGATTTGTAGGGTATTTCAAAAGGAAGGTCCTGGTCCCAGGAATGGTGCACAGTATGGAAAACCATTTAATGAGAAAGACTGGGATAGCGAAGAGGAAATTGATTATGTACAAGCTGTCCCTGTTGCTGCTGTGTCTGCACCAGCTCTCATTCTACCTAGCTCAAGCCATATTTCTGAAGTAAATGACATGCATCCCTCTGCAAGTGGATGTATTGGACTGACCTCTTTATCATGTCTATCAAGATTGATGCCCTCTGGCATGACACACCCTTCAGCTCTAGGCAATCAAGCTGATGATGACATTTTATCCATGCTTGCTATTTTCGACGATGAAAATGCATTGGCCGGGAATGAAAACAATGGATCTGAGGTGTGTAATCTATTTCTTGATATTTATATTTGTTACAACTAACTTGTGCCAGATGCTCCCCAACTTTGGTAGCTCTGACTTTATCTTTCAACATCTTTTTTCTACACTTTTTACCTCAACTTTTTTTATTTTTTTTATCTCGTATTTGACTCCTCGTGAACTGTTCCTCTTTTTTTAGTTATCTTTGAAATAGTGAAATTATCGTGTATTTTATATAAAACATCACACTCTGGCTTCATTTGTCAGTCACTTGCTGAATTGCATGACACATTGGCACTTTTAGTGTTATGCAAGGGCCATGGTGGTTACCATTCTTGCTGCACCAATCTCATCACCAACAATGGCGATGGCAGATTGAAAGCCTGTAGCAAAAAAAAATGAGAAATCGGATCATGAGCCATGGCTAGACAGACCCAAAACCCACATGACCTATAAATATGTGTAGAAAGTAGTAAAGAGTATATAGAATACTATCTTGAAATAAAAATATATATTTTAAATAGTCTCATTTTTTAGAATTTTAAATAATGACTAATTAGATTACAGTAAACAGTAATTTATAGTACAAAATTCTTATGCATTAGGATGAAATATGTATAATGTATATAGTATAATACATATAATGTATCACGTGTTATTAGAAGGTCTGTATATGACTACCTCCAATATCTGGCAAGCTTCCATTTCTGGTGAACAGTCATTTTTTTTACGCCCTATTTTTGGCAACCTCTCCTTCTCTTTGTTATCTTTGTAATTCTTCTTTCCTGCTATCTTTCATTTGCTCTCGGTTCTGTTATTATTTTTTTCCTCCACTAGTCCACTTATGCTACTGTTAAGACTTATGATATTATGTGCTTTCTATCAGTTTGATCATTGGTCTTAACATATGCTGGCAGTGCTTTTGGTTTTGTATTGTATTCTGCATTTTTTGGGTATATTTTGGTATATGTGTTCTCTTTTATGATTGCCACCTCTTTTGTCTTAGTTTCCTATGCCATCTGCCATTAGAACATTGGACATTTGTGTTATACTTTATATTTTTGTTAAAAAAGATTGGGGGCAAGAAGTGGCCTTCTAGTCGAAGGCAGGAAAAGCCTTCTGATTAATTGCACTTGCAATTAACTCACTCCAAAGTGATTAGTGGGGCTTAAATGTTCTACATGGCCTAGGTAATGAATGTTAGACTATGCTGTAGTGTGCATAAGTGTGAGATTAGACATATACTTTCAATAATTTAATGCAATGCTGCATTCTACTTATGTCTGCTTCGTTGTTATATTGGACTTGGTGGTGTCATTTAAGAATATCCTTGCTACCCCTTTTGTGCAAATGAAAGTTTGTAAATTAGTTGGTTAGTTTTCCAAAGAAATAAATTAAGAAGCAGGCATATCATCATTTTCCAATCTTACTCTCTCTTTTGTTTAGGGAGGGTGAAGGTTGTTTATTTTTGAATAGATTTTTGTTTATTAGTTTCCCCTTTGACTAACCATTAAAAACTGGAAGGCTGAATTGCTTAAAAAATTTTGATCCTACTAATCAAGATGGCAGAGGTATTTGTTTTCTTATCTAGAAATGTATTGAGTTTCTTTTCTGTAGATTTTATTTTGTAATATTATGAGTCATAGACAGTTTTAACATGCTTGCTTTAATCTACATCACTTTGCTCATATATGCTAATATGTGATTATGTTCGACAGAAGGTTGATAATCCTGGTCAAGCAAACAACGCTGAAGGTGCACCTTATTTAATTCCAAATGAGATTTTTGAGGACCTGGGAGATATTAACAGCTTGGTTGGATTGGATGATGGAAGCGGTTTTTCCTATGGCCAAAAAGATGAAAATACTATAAACGAAAAGCTATTTGCTGGCGACATCTCTTTGTTTTGCAACCCCCCTGATTTCTTTGAGTTGCTTGACCTAGAGGTGCCATTATCCTGGCAGACTAAACATGATGGCTGA
Protein sequence

>MS.gene054948.t1

MAETKLMIPGFRFHPTDVELVMYFLKRKILGRKFPFHVIAELDIYKYAPWDLPDKSLLKSGDLQWYFFTPVGKKYCTGGRMNRATEVGYWKTTGKDRSIEHKNQVVGMIRTLVFHTGKAPKGDRTDWVMHEYRLEDKDLADNGVPQNSYVICRVFQKEGPGPRNGAQYGKPFNEKDWDSEEEIDYVQAVPVAAVSAPALILPSSSHISEVNDMHPSASGCIGLTSLSCLSRLMPSGMTHPSALGNQADDDILSMLAIFDDENALAGNENNGSEKVDNPGQANNAEGAPYLIPNEIFEDLGDINSLVGLDDGSGFSYGQKDENTINEKLFAGDISLFCNPPDFFELLDLEVPLSWQTKHDG