AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene049345

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene049345.t1 MTR_3g095190 90.598 351 23 3 1 347 3 347 0.0 551
MS.gene049345.t1 MTR_8g092460 45.652 276 126 8 27 294 5 264 4.12e-64 206
MS.gene049345.t1 MTR_7g020980 75.000 72 18 0 165 236 43 114 2.22e-32 119
MS.gene049345.t1 MTR_7g021010 73.239 71 19 0 163 233 41 111 1.50e-31 117
MS.gene049345.t1 MTR_7g021010 73.239 71 19 0 163 233 2 72 1.55e-31 116
MS.gene049345.t1 MTR_4g086160 60.185 108 36 3 129 229 45 152 8.70e-30 114
MS.gene049345.t1 MTR_4g086165 82.759 58 10 0 172 229 81 138 1.42e-28 110
MS.gene049345.t1 MTR_2g435590 68.919 74 21 1 167 238 88 161 1.54e-27 109
MS.gene049345.t1 MTR_4g086190 82.456 57 10 0 173 229 96 152 1.59e-27 108
MS.gene049345.t1 MTR_4g086220 82.456 57 10 0 173 229 96 152 1.93e-27 108
MS.gene049345.t1 MTR_8g022820 73.913 69 14 1 166 230 112 180 3.51e-27 110
MS.gene049345.t1 MTR_8g022820 73.913 69 14 1 166 230 113 181 3.93e-27 110
MS.gene049345.t1 MTR_8g022820 73.913 69 14 1 166 230 113 181 3.93e-27 110
MS.gene049345.t1 MTR_2g105380 73.913 69 14 1 166 230 106 174 5.31e-27 110
MS.gene049345.t1 MTR_1g087920 63.750 80 19 2 170 239 74 153 1.82e-25 104
MS.gene049345.t1 MTR_5g009620 45.082 122 52 2 133 239 64 185 2.67e-25 104
MS.gene049345.t1 MTR_2g078680 69.231 65 20 0 172 236 30 94 4.25e-25 101
MS.gene049345.t1 MTR_2g014340 41.481 135 76 1 167 298 13 147 5.05e-25 100
MS.gene049345.t1 MTR_3g098580 88.889 63 7 0 170 232 73 135 6.28e-25 102
MS.gene049345.t1 MTR_5g085100 74.138 58 15 0 172 229 45 102 1.70e-24 101
MS.gene049345.t1 MTR_4g100380 63.529 85 25 2 161 239 128 212 1.97e-24 100
MS.gene049345.t1 MTR_4g100450 67.532 77 22 2 159 232 138 214 3.96e-24 100
MS.gene049345.t1 MTR_2g015040 70.968 62 17 1 169 229 59 120 5.55e-24 97.1
MS.gene049345.t1 MTR_4g100420 66.234 77 23 2 159 232 141 217 6.03e-24 100
MS.gene049345.t1 MTR_3g053690 75.862 58 14 0 172 229 26 83 6.40e-24 98.6
MS.gene049345.t1 MTR_4g078710 67.647 68 15 1 173 240 28 88 8.24e-24 98.2
MS.gene049345.t1 MTR_1g028560 66.176 68 19 1 170 233 112 179 1.30e-23 100
MS.gene049345.t1 MTR_8g006825 63.235 68 24 1 171 237 94 161 2.47e-23 96.7
MS.gene049345.t1 MTR_4g088005 54.023 87 38 2 149 233 32 118 2.65e-23 94.0
MS.gene049345.t1 MTR_8g006815 68.254 63 19 1 171 232 94 156 2.92e-23 96.3
MS.gene049345.t1 MTR_5g085070 70.690 58 17 0 172 229 50 107 4.70e-23 97.8
MS.gene049345.t1 MTR_1g090290 64.286 70 24 1 171 239 111 180 5.14e-23 95.5
MS.gene049345.t1 MTR_2g438180 61.972 71 26 1 161 230 2 72 5.57e-23 93.6
MS.gene049345.t1 MTR_8g006840 72.131 61 16 1 173 232 125 185 6.10e-23 95.1
MS.gene049345.t1 MTR_2g015050 70.968 62 17 1 169 229 130 191 1.52e-22 95.9
MS.gene049345.t1 MTR_4g008860 64.516 62 22 0 170 231 5 66 3.49e-22 93.2
MS.gene049345.t1 MTR_3g090760 68.966 58 18 0 171 228 111 168 4.24e-22 96.3
MS.gene049345.t1 MTR_7g081795 70.000 60 17 1 171 229 58 117 4.87e-22 92.8
MS.gene049345.t1 MTR_2g103700 66.129 62 21 0 171 232 5 66 5.19e-22 92.0
MS.gene049345.t1 MTR_7g081815 70.000 60 17 1 171 229 59 118 5.24e-22 92.8
MS.gene049345.t1 MTR_4g114570 57.534 73 31 0 171 243 5 77 5.25e-22 93.2
MS.gene049345.t1 MTR_7g081805 70.000 60 17 1 171 229 59 118 1.02e-21 92.0
MS.gene049345.t1 MTR_2g014300 67.692 65 17 1 165 229 11 71 1.02e-21 91.3
MS.gene049345.t1 MTR_4g010640 67.797 59 19 0 171 229 5 63 1.03e-21 92.4
MS.gene049345.t1 MTR_3g106290 62.903 62 23 0 170 231 5 66 1.60e-21 91.3
MS.gene049345.t1 MTR_1g070070 67.188 64 20 1 172 234 20 83 1.75e-21 89.7
MS.gene049345.t1 MTR_4g054740 68.750 64 19 1 170 232 94 157 2.14e-21 92.0
MS.gene049345.t1 MTR_1g048610 65.152 66 22 1 168 232 84 149 2.35e-21 91.7
MS.gene049345.t1 MTR_6g033255 83.333 66 11 0 168 233 15 80 3.12e-21 90.9
MS.gene049345.t1 MTR_1g074310 64.615 65 22 1 166 229 14 78 3.49e-21 89.0
MS.gene049345.t1 MTR_4g054360 68.750 64 19 1 171 233 122 185 4.48e-21 91.7
MS.gene049345.t1 MTR_1g098460 52.299 174 59 5 107 271 66 224 7.10e-21 92.8
MS.gene049345.t1 MTR_7g046260 59.155 71 28 1 173 243 61 130 1.02e-20 90.1
MS.gene049345.t1 MTR_7g117690 56.338 71 30 1 173 243 28 97 1.19e-20 88.2
MS.gene049345.t1 MTR_7g096700 72.131 61 16 1 170 229 17 77 1.38e-20 87.0
MS.gene049345.t1 MTR_6g088405 65.517 58 20 0 173 230 44 101 2.33e-20 88.6
MS.gene049345.t1 MTR_5g062700 67.797 59 19 0 171 229 171 229 2.41e-20 91.3
MS.gene049345.t1 MTR_3g110205 55.128 78 34 1 164 241 34 110 2.52e-20 87.8
MS.gene049345.t1 MTR_8g099215 67.241 58 19 0 171 228 105 162 2.69e-20 90.5
MS.gene049345.t1 MTR_8g006410 58.333 72 29 1 173 244 52 122 2.76e-20 88.2
MS.gene049345.t1 MTR_4g054860 66.154 65 21 1 170 233 128 192 3.46e-20 89.4
MS.gene049345.t1 MTR_8g102800 67.241 58 19 0 173 230 37 94 3.58e-20 88.6
MS.gene049345.t1 MTR_7g096750 71.667 60 16 1 172 230 19 78 3.99e-20 85.9
MS.gene049345.t1 MTR_3g074130 66.102 59 20 0 171 229 148 206 4.57e-20 90.1
MS.gene049345.t1 MTR_1g090170 60.606 66 26 0 164 229 230 295 4.65e-20 90.9
MS.gene049345.t1 MTR_1g090170 60.606 66 26 0 164 229 143 208 5.71e-20 89.7
MS.gene049345.t1 MTR_2g089170 62.903 62 22 1 173 234 65 125 6.65e-20 86.7
MS.gene049345.t1 MTR_2g101340 62.069 58 22 0 173 230 41 98 7.84e-20 87.0
MS.gene049345.t1 MTR_7g085810 59.091 66 27 0 172 237 29 94 1.04e-19 87.8
MS.gene049345.t1 MTR_8g069360 68.421 57 18 0 172 228 43 99 1.16e-19 90.1
MS.gene049345.t1 MTR_7g092190 61.765 68 26 0 169 236 26 93 1.31e-19 88.2
MS.gene049345.t1 MTR_8g013860 45.361 97 50 1 173 269 47 140 1.33e-19 86.3
MS.gene049345.t1 MTR_5g032820 61.972 71 24 1 172 242 45 112 1.39e-19 89.0
MS.gene049345.t1 MTR_7g096810 60.920 87 27 3 166 245 2 88 1.56e-19 84.0
MS.gene049345.t1 MTR_8g090350 64.407 59 21 0 171 229 111 169 1.71e-19 87.8
MS.gene049345.t1 MTR_1g074230 64.062 64 22 1 172 234 18 81 1.86e-19 84.0
MS.gene049345.t1 MTR_3g102100 62.069 58 22 0 173 230 45 102 2.02e-19 84.7
MS.gene049345.t1 MTR_0939s0010 62.500 64 23 1 173 236 65 127 2.09e-19 85.5
MS.gene049345.t1 MTR_5g016750 57.143 63 27 0 168 230 20 82 2.15e-19 85.1
MS.gene049345.t1 MTR_4g100650 63.793 58 21 0 173 230 74 131 2.39e-19 86.7
MS.gene049345.t1 MTR_5g075570 63.158 57 21 0 173 229 124 180 2.45e-19 87.4
MS.gene049345.t1 MTR_2g090235 63.333 60 22 0 171 230 216 275 3.68e-19 88.6
MS.gene049345.t1 MTR_5g082950 64.407 59 21 0 170 228 63 121 4.08e-19 87.4
MS.gene049345.t1 MTR_1g019110 59.677 62 25 0 169 230 40 101 4.97e-19 84.0
MS.gene049345.t1 MTR_6g029180 53.425 73 34 0 165 237 25 97 8.40e-19 86.3
MS.gene049345.t1 MTR_4g035430 56.452 62 27 0 173 234 32 93 9.76e-19 84.3
MS.gene049345.t1 MTR_1g070020 65.000 60 20 1 170 228 67 126 1.34e-18 84.0
MS.gene049345.t1 MTR_5g012910 62.069 58 22 0 173 230 28 85 1.40e-18 82.8
MS.gene049345.t1 MTR_5g083340 61.290 62 24 0 169 230 81 142 1.60e-18 86.7
MS.gene049345.t1 MTR_1g069985 63.333 60 21 1 170 228 72 131 1.69e-18 83.6
MS.gene049345.t1 MTR_7g011630 57.143 63 27 0 166 228 35 97 1.89e-18 86.7
MS.gene049345.t1 MTR_8g027465 52.055 73 33 1 173 243 39 111 1.89e-18 82.4
MS.gene049345.t1 MTR_1g070000 67.273 55 17 1 175 228 86 140 2.99e-18 83.2
MS.gene049345.t1 MTR_4g119270 59.649 57 23 0 172 228 52 108 3.23e-18 85.1
MS.gene049345.t1 MTR_6g466130 56.944 72 30 1 173 244 66 136 3.92e-18 82.8
MS.gene049345.t1 MTR_6g012970 58.333 60 25 0 169 228 34 93 4.24e-18 85.1
MS.gene049345.t1 MTR_1g070015 61.290 62 23 1 168 228 79 140 5.27e-18 82.4
MS.gene049345.t1 MTR_2g019750 49.351 77 33 1 158 228 29 105 6.37e-18 83.6
MS.gene049345.t1 MTR_8g085960 61.017 59 23 0 170 228 22 80 8.68e-18 82.0
MS.gene049345.t1 MTR_1g070045 60.938 64 24 1 166 228 59 122 8.94e-18 80.5
MS.gene049345.t1 MTR_1g074250 56.338 71 29 1 166 234 12 82 9.25e-18 79.0
MS.gene049345.t1 MTR_6g037610 90.566 53 5 0 180 232 187 239 9.53e-18 84.3
MS.gene049345.t1 MTR_7g084370 53.425 73 30 1 172 244 41 109 1.11e-17 82.4
MS.gene049345.t1 MTR_1g070035 61.667 60 22 1 170 228 74 133 1.24e-17 81.3
MS.gene049345.t1 MTR_1g040430 60.656 61 23 1 180 239 118 178 1.88e-17 80.1
MS.gene049345.t1 MTR_1g069960 72.881 59 15 1 172 229 26 84 2.78e-17 78.2
MS.gene049345.t1 MTR_6g465430 40.000 125 56 2 118 242 17 122 2.85e-17 80.9
MS.gene049345.t1 MTR_6g465690 55.714 70 30 1 173 242 63 131 3.10e-17 80.9
MS.gene049345.t1 MTR_8g023680 66.667 48 16 0 172 219 115 162 3.13e-17 82.4
MS.gene049345.t1 MTR_4g111915 58.333 60 25 0 170 229 50 109 3.26e-17 77.8
MS.gene049345.t1 MTR_5g083330 60.656 61 24 0 170 230 32 92 3.85e-17 81.3
MS.gene049345.t1 MTR_8g032610 50.704 71 35 0 171 241 25 95 4.29e-17 81.3
MS.gene049345.t1 MTR_4g112490 58.333 60 25 0 170 229 50 109 5.55e-17 79.0
MS.gene049345.t1 MTR_6g466000 55.714 70 30 1 173 242 57 125 6.29e-17 79.3
MS.gene049345.t1 MTR_4g082345 53.030 66 31 0 163 228 38 103 8.40e-17 80.5
MS.gene049345.t1 MTR_6g465850 55.556 72 31 1 173 244 63 133 9.10e-17 79.7
MS.gene049345.t1 MTR_6g465510 56.522 69 29 1 173 241 33 100 1.14e-16 78.2
MS.gene049345.t1 MTR_5g008590 67.241 58 19 0 173 230 11 68 1.24e-16 77.4
MS.gene049345.t1 MTR_6g465420 39.200 125 57 2 118 242 17 122 1.24e-16 79.3
MS.gene049345.t1 MTR_1g101600 54.286 70 31 1 173 242 41 109 1.25e-16 77.8
MS.gene049345.t1 MTR_6g465460 54.930 71 31 1 173 243 54 123 1.50e-16 79.0
MS.gene049345.t1 MTR_6g465450 54.286 70 31 1 173 242 54 122 1.74e-16 78.6
MS.gene049345.t1 MTR_1g014860 54.237 59 27 0 171 229 20 78 2.03e-16 77.8
MS.gene049345.t1 MTR_1g014820 54.237 59 27 0 171 229 25 83 2.33e-16 78.6
MS.gene049345.t1 MTR_1g069945 63.889 72 25 1 163 233 91 162 2.60e-16 78.2
MS.gene049345.t1 MTR_2g043050 52.239 67 26 1 173 239 19 79 2.80e-16 77.0
MS.gene049345.t1 MTR_1g014780 54.237 59 27 0 171 229 36 94 3.08e-16 77.4
MS.gene049345.t1 MTR_1g069940 62.500 72 26 1 163 233 85 156 3.24e-16 77.4
MS.gene049345.t1 MTR_8g023700 66.667 48 16 0 173 220 117 164 3.58e-16 79.3
MS.gene049345.t1 MTR_1g014800 52.542 59 28 0 171 229 29 87 3.66e-16 77.0
MS.gene049345.t1 MTR_2g016730 53.731 67 29 1 169 233 19 85 4.06e-16 79.0
MS.gene049345.t1 MTR_3g105510 47.619 63 33 0 166 228 30 92 1.05e-15 76.3
MS.gene049345.t1 MTR_2g043030 50.746 67 27 1 173 239 19 79 1.18e-15 75.1
MS.gene049345.t1 MTR_1g023170 62.121 66 22 1 173 238 40 102 1.27e-15 76.6
MS.gene049345.t1 MTR_6g466020 50.000 74 36 1 173 246 43 115 1.29e-15 74.7
MS.gene049345.t1 MTR_6g465530 53.623 69 31 1 173 241 33 100 1.66e-15 74.7
MS.gene049345.t1 MTR_1g097190 56.140 57 24 1 173 228 23 79 1.78e-15 73.2
MS.gene049345.t1 MTR_1g012470 66.667 60 20 0 170 229 4 63 2.00e-15 74.3
MS.gene049345.t1 MTR_1g110970 54.098 61 24 1 172 228 96 156 2.36e-15 76.6
MS.gene049345.t1 MTR_7g096830 67.692 65 20 1 170 233 95 159 4.02e-15 74.3
MS.gene049345.t1 MTR_7g070220 58.730 63 19 1 173 228 78 140 5.68e-15 76.3
MS.gene049345.t1 MTR_3g017420 60.784 51 20 0 180 230 2 52 7.37e-15 69.3
MS.gene049345.t1 MTR_6g088425 67.241 58 19 0 173 230 49 106 7.68e-15 73.6
MS.gene049345.t1 MTR_2g043040 44.304 79 38 1 161 239 7 79 1.02e-14 73.2
MS.gene049345.t1 MTR_3g107380 67.797 59 19 0 171 229 6 64 1.15e-14 72.4
MS.gene049345.t1 MTR_5g085125 55.172 58 26 0 172 229 15 72 1.17e-14 71.6
MS.gene049345.t1 MTR_7g096780 66.154 65 21 1 170 233 82 146 1.20e-14 73.2
MS.gene049345.t1 MTR_5g008540 50.000 58 29 0 175 232 26 83 1.61e-14 68.9
MS.gene049345.t1 MTR_3g112440 65.517 58 20 0 173 230 39 96 2.14e-14 72.0
MS.gene049345.t1 MTR_1g105400 58.333 48 20 0 172 219 114 161 2.15e-14 73.9
MS.gene049345.t1 MTR_1g006660 66.667 57 19 0 173 229 47 103 3.54e-14 72.0
MS.gene049345.t1 MTR_5g008470 44.304 79 33 1 154 232 67 134 3.79e-14 70.5
MS.gene049345.t1 MTR_5g057810 73.171 41 11 0 172 212 87 127 3.96e-14 72.4
MS.gene049345.t1 MTR_5g057647 73.171 41 11 0 172 212 87 127 3.96e-14 72.4
MS.gene049345.t1 MTR_4g102670 50.000 86 32 3 173 258 15 89 4.52e-14 69.7
MS.gene049345.t1 MTR_2g043020 47.761 67 29 1 173 239 19 79 9.31e-14 69.7
MS.gene049345.t1 MTR_5g008790 51.613 62 28 1 171 230 16 77 3.37e-13 67.4
MS.gene049345.t1 MTR_1g074370 61.538 65 24 1 170 233 70 134 3.99e-13 68.2
MS.gene049345.t1 MTR_1g043350 66.102 59 19 1 171 228 80 138 4.07e-13 68.2
MS.gene049345.t1 MTR_5g008550 44.048 84 46 1 173 256 21 103 5.37e-13 67.4
MS.gene049345.t1 MTR_3g105480 50.000 56 28 0 175 230 33 88 6.90e-13 67.8
MS.gene049345.t1 MTR_2g085015 51.562 64 29 2 173 234 47 110 1.06e-12 67.4
MS.gene049345.t1 MTR_7g028925 52.632 57 24 1 173 229 29 82 1.09e-12 63.9
MS.gene049345.t1 MTR_4g009260 66.102 59 20 0 170 228 74 132 4.54e-12 65.1
MS.gene049345.t1 MTR_5g009410 64.706 68 21 1 170 237 114 178 4.93e-12 66.6
MS.gene049345.t1 MTR_5g058470 48.889 90 38 2 168 256 91 173 1.43e-11 65.1
MS.gene049345.t1 MTR_1g093600 57.143 56 22 1 172 227 63 116 2.90e-11 64.7
MS.gene049345.t1 MTR_5g053920 49.275 69 29 2 164 228 53 119 3.90e-11 64.3
MS.gene049345.t1 MTR_5g010940 47.222 72 31 2 173 237 54 125 6.31e-11 62.0
MS.gene049345.t1 MTR_1g101550 54.054 74 32 2 172 245 56 127 6.49e-11 62.0
MS.gene049345.t1 MTR_5g010930 48.438 64 27 1 173 230 49 112 8.78e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene049345.t1 AT5G61890 84.615 65 10 0 170 234 87 151 2.41e-33 124
MS.gene049345.t1 AT5G13330 68.966 87 19 2 170 256 36 114 1.64e-32 121
MS.gene049345.t1 AT2G33710 72.727 77 17 1 170 242 67 143 5.50e-32 120
MS.gene049345.t1 AT2G33710 72.727 77 17 1 170 242 67 143 7.72e-32 120
MS.gene049345.t1 AT5G64750 59.048 105 34 1 180 275 192 296 9.29e-31 120
MS.gene049345.t1 AT2G47520 73.134 67 16 1 165 229 40 106 8.07e-29 110
MS.gene049345.t1 AT5G50080 44.162 197 60 5 38 234 1 147 1.36e-27 108
MS.gene049345.t1 AT5G50080 61.404 114 33 2 121 234 36 138 1.94e-27 108
MS.gene049345.t1 AT1G43160 89.231 65 7 0 168 232 56 120 5.62e-27 105
MS.gene049345.t1 AT5G07310 84.615 65 10 0 170 234 89 153 1.98e-26 106
MS.gene049345.t1 AT1G28370 71.875 64 17 1 166 229 52 114 1.94e-25 102
MS.gene049345.t1 AT1G72360 62.500 72 27 0 172 243 24 95 1.95e-25 102
MS.gene049345.t1 AT4G11140 61.842 76 22 1 171 246 85 153 1.96e-25 104
MS.gene049345.t1 AT1G72360 58.750 80 31 1 166 243 67 146 2.41e-25 103
MS.gene049345.t1 AT1G28370 71.875 64 17 1 166 229 14 76 2.44e-25 100
MS.gene049345.t1 AT1G72360 58.750 80 31 1 166 243 65 144 2.48e-25 103
MS.gene049345.t1 AT3G16770 74.603 63 14 1 170 230 74 136 3.49e-25 102
MS.gene049345.t1 AT5G47220 64.935 77 26 1 171 246 115 191 6.95e-25 101
MS.gene049345.t1 AT1G03800 72.414 58 16 0 172 229 52 109 1.51e-24 100
MS.gene049345.t1 AT3G15210 71.429 63 18 0 172 234 24 86 1.67e-24 100
MS.gene049345.t1 AT5G47230 70.423 71 20 1 168 237 151 221 1.70e-24 102
MS.gene049345.t1 AT4G17500 70.000 70 20 1 171 239 146 215 2.50e-24 100
MS.gene049345.t1 AT4G17490 66.667 75 24 1 164 237 128 202 8.37e-24 99.8
MS.gene049345.t1 AT5G44210 75.439 57 14 0 173 229 33 89 1.12e-23 97.4
MS.gene049345.t1 AT5G51190 66.197 71 22 2 160 229 60 129 1.26e-23 97.8
MS.gene049345.t1 AT2G22200 50.000 98 48 1 168 264 66 163 1.91e-23 98.2
MS.gene049345.t1 AT4G27950 50.980 102 43 2 167 268 112 206 5.03e-23 98.6
MS.gene049345.t1 AT3G20310 49.495 99 46 1 172 270 26 120 6.22e-23 96.3
MS.gene049345.t1 AT2G44840 74.576 59 14 1 172 229 91 149 8.42e-23 95.5
MS.gene049345.t1 AT1G15360 67.213 61 20 0 171 231 5 65 1.35e-22 94.4
MS.gene049345.t1 AT1G15360 67.213 61 20 0 171 231 5 65 1.35e-22 94.4
MS.gene049345.t1 AT1G50640 72.414 58 16 0 172 229 27 84 1.51e-22 95.1
MS.gene049345.t1 AT5G61600 66.667 63 20 1 171 232 86 148 2.63e-22 94.7
MS.gene049345.t1 AT5G53290 61.972 71 27 0 158 228 110 180 3.37e-22 96.7
MS.gene049345.t1 AT1G28360 67.742 62 20 0 173 234 12 73 4.44e-22 92.8
MS.gene049345.t1 AT4G23750 65.000 60 21 0 169 228 118 177 8.82e-22 95.1
MS.gene049345.t1 AT4G23750 65.000 60 21 0 169 228 118 177 8.82e-22 95.1
MS.gene049345.t1 AT4G28140 63.077 65 24 0 169 233 139 203 1.72e-21 93.6
MS.gene049345.t1 AT5G43410 67.188 64 20 1 172 234 14 77 1.85e-21 89.4
MS.gene049345.t1 AT4G13620 61.111 72 28 0 159 230 218 289 2.21e-21 94.7
MS.gene049345.t1 AT5G65130 64.516 62 22 0 171 232 111 172 2.29e-21 92.8
MS.gene049345.t1 AT5G65130 64.516 62 22 0 171 232 109 170 2.47e-21 92.8
MS.gene049345.t1 AT2G46310 61.111 72 22 1 172 243 98 163 2.51e-21 93.2
MS.gene049345.t1 AT1G71450 65.517 58 20 0 173 230 24 81 2.52e-21 90.5
MS.gene049345.t1 AT3G23230 71.186 59 16 1 172 229 19 77 2.64e-21 89.0
MS.gene049345.t1 AT4G39780 64.516 62 22 0 169 230 89 150 3.28e-21 92.4
MS.gene049345.t1 AT1G12980 39.216 153 73 5 160 312 44 176 3.60e-21 93.2
MS.gene049345.t1 AT3G60490 57.534 73 31 0 158 230 56 128 4.06e-21 91.7
MS.gene049345.t1 AT5G07580 61.644 73 26 2 158 229 96 167 5.07e-21 90.1
MS.gene049345.t1 AT5G25390 64.407 59 21 0 171 229 5 63 5.38e-21 89.7
MS.gene049345.t1 AT4G06746 58.730 63 26 0 170 232 33 95 5.45e-21 88.6
MS.gene049345.t1 AT1G22190 65.000 60 21 0 171 230 81 140 7.62e-21 91.3
MS.gene049345.t1 AT5G25190 61.290 62 24 0 170 231 5 66 1.00e-20 89.0
MS.gene049345.t1 AT3G57600 68.966 58 18 0 172 229 27 84 1.03e-20 90.9
MS.gene049345.t1 AT1G36060 66.102 59 20 0 171 229 141 199 1.58e-20 91.3
MS.gene049345.t1 AT2G35700 59.420 69 27 1 173 241 45 112 1.59e-20 88.6
MS.gene049345.t1 AT2G20880 64.516 62 22 0 169 230 183 244 2.16e-20 91.3
MS.gene049345.t1 AT3G61630 56.410 78 29 1 156 228 83 160 2.45e-20 90.5
MS.gene049345.t1 AT5G05410 48.039 102 45 4 173 272 79 174 3.15e-20 90.1
MS.gene049345.t1 AT1G78080 66.102 59 20 0 171 229 150 208 3.61e-20 90.5
MS.gene049345.t1 AT5G05410 48.039 102 45 4 173 272 79 174 4.65e-20 90.1
MS.gene049345.t1 AT3G16280 59.155 71 28 1 173 243 79 148 5.77e-20 88.6
MS.gene049345.t1 AT1G75490 55.844 77 27 2 173 244 42 116 6.99e-20 87.0
MS.gene049345.t1 AT3G16280 59.155 71 28 1 173 243 61 130 7.24e-20 87.8
MS.gene049345.t1 AT4G32800 57.576 66 28 0 165 230 11 76 7.35e-20 87.4
MS.gene049345.t1 AT4G34410 82.456 57 10 0 173 229 136 192 7.41e-20 88.6
MS.gene049345.t1 AT2G25820 65.517 58 20 0 173 230 26 83 8.80e-20 87.4
MS.gene049345.t1 AT1G01250 54.930 71 31 1 173 243 45 114 9.51e-20 86.3
MS.gene049345.t1 AT3G50260 34.328 134 87 1 170 302 18 151 1.16e-19 85.1
MS.gene049345.t1 AT4G36900 62.069 58 22 0 173 230 30 87 1.16e-19 86.3
MS.gene049345.t1 AT4G16750 50.000 84 41 1 159 242 26 108 1.79e-19 85.1
MS.gene049345.t1 AT2G23340 62.069 58 22 0 173 230 28 85 1.92e-19 85.1
MS.gene049345.t1 AT2G40340 55.128 78 34 1 173 250 14 90 2.24e-19 87.4
MS.gene049345.t1 AT2G40340 55.128 78 34 1 173 250 14 90 2.24e-19 87.4
MS.gene049345.t1 AT2G40340 55.128 78 34 1 173 250 14 90 2.24e-19 87.4
MS.gene049345.t1 AT4G18450 70.000 60 16 2 171 228 108 167 2.78e-19 87.4
MS.gene049345.t1 AT5G67190 61.667 60 23 0 171 230 19 78 3.03e-19 84.7
MS.gene049345.t1 AT5G11590 65.517 58 20 0 173 230 51 108 3.29e-19 85.9
MS.gene049345.t1 AT3G11020 65.000 60 21 0 173 232 78 137 3.50e-19 87.8
MS.gene049345.t1 AT5G19790 64.407 59 21 0 170 228 19 77 7.74e-19 85.5
MS.gene049345.t1 AT2G40340 55.128 78 34 1 173 250 79 155 7.89e-19 87.0
MS.gene049345.t1 AT3G23240 62.903 62 22 1 168 228 77 138 7.91e-19 84.3
MS.gene049345.t1 AT5G25390 62.712 59 19 1 171 229 5 60 8.13e-19 83.6
MS.gene049345.t1 AT2G44940 59.375 64 26 0 167 230 94 157 8.36e-19 85.9
MS.gene049345.t1 AT1G24590 66.667 57 19 0 172 228 57 113 8.37e-19 86.3
MS.gene049345.t1 AT1G46768 46.591 88 44 1 146 230 1 88 8.64e-19 82.8
MS.gene049345.t1 AT1G46768 46.591 88 44 1 146 230 1 88 8.64e-19 82.8
MS.gene049345.t1 AT1G19210 58.333 60 25 0 172 231 11 70 8.78e-19 83.6
MS.gene049345.t1 AT2G40340 55.128 78 34 1 173 250 72 148 9.34e-19 86.7
MS.gene049345.t1 AT1G46768 46.591 88 44 1 146 230 1 88 1.07e-18 82.0
MS.gene049345.t1 AT2G40340 55.128 78 34 1 173 250 72 148 1.10e-18 85.9
MS.gene049345.t1 AT1G12890 48.421 95 42 3 159 250 11 101 2.22e-18 83.2
MS.gene049345.t1 AT2G31230 59.701 67 26 1 168 233 81 147 2.42e-18 83.6
MS.gene049345.t1 AT5G13910 46.914 81 39 1 165 245 12 88 3.15e-18 82.8
MS.gene049345.t1 AT1G74930 47.436 78 35 1 160 231 2 79 3.66e-18 82.0
MS.gene049345.t1 AT4G25470 53.333 75 34 1 173 246 51 125 4.55e-18 82.4
MS.gene049345.t1 AT1G21910 59.649 57 23 0 173 229 50 106 4.67e-18 82.8
MS.gene049345.t1 AT5G25810 62.069 58 22 0 173 230 36 93 5.32e-18 82.0
MS.gene049345.t1 AT4G25490 60.606 66 25 1 173 237 48 113 7.04e-18 81.6
MS.gene049345.t1 AT4G25480 53.333 75 34 1 173 246 51 125 7.54e-18 81.6
MS.gene049345.t1 AT5G18450 62.500 56 21 0 173 228 34 89 9.03e-18 83.2
MS.gene049345.t1 AT3G14230 37.696 191 94 5 100 284 59 230 1.01e-17 84.0
MS.gene049345.t1 AT1G22985 62.903 62 20 1 170 228 72 133 1.43e-17 79.3
MS.gene049345.t1 AT5G18560 61.404 57 22 0 172 228 54 110 1.55e-17 83.2
MS.gene049345.t1 AT5G21960 56.250 64 28 0 168 231 2 65 1.58e-17 80.9
MS.gene049345.t1 AT3G14230 50.420 119 46 3 170 284 120 229 1.60e-17 83.2
MS.gene049345.t1 AT3G14230 50.420 119 46 3 170 284 125 234 1.79e-17 83.2
MS.gene049345.t1 AT1G53910 77.049 61 14 0 170 230 122 182 1.82e-17 83.2
MS.gene049345.t1 AT1G53910 77.049 61 14 0 170 230 122 182 1.82e-17 83.2
MS.gene049345.t1 AT1G53910 77.049 61 14 0 170 230 120 180 1.88e-17 82.8
MS.gene049345.t1 AT4G31060 52.459 61 29 0 171 231 25 85 6.29e-17 78.6
MS.gene049345.t1 AT5G51990 59.091 66 26 1 173 237 54 119 1.13e-16 78.6
MS.gene049345.t1 AT1G53170 73.684 57 15 0 172 228 30 86 1.52e-16 77.4
MS.gene049345.t1 AT1G28160 63.158 57 21 0 172 228 38 94 1.72e-16 78.6
MS.gene049345.t1 AT2G36450 59.677 62 24 1 173 233 15 76 1.81e-16 77.0
MS.gene049345.t1 AT1G68550 66.000 50 17 0 170 219 110 159 2.01e-16 79.7
MS.gene049345.t1 AT1G68550 66.000 50 17 0 170 219 110 159 2.01e-16 79.7
MS.gene049345.t1 AT5G67000 53.968 63 29 0 165 227 113 175 2.85e-16 76.6
MS.gene049345.t1 AT5G11190 71.186 59 17 0 171 229 5 63 3.53e-16 76.3
MS.gene049345.t1 AT2G40350 57.895 57 24 0 173 229 74 130 3.70e-16 75.9
MS.gene049345.t1 AT2G40350 57.895 57 24 0 173 229 67 123 4.42e-16 75.1
MS.gene049345.t1 AT3G23220 63.768 69 24 1 172 239 13 81 7.14e-16 74.3
MS.gene049345.t1 AT1G63030 39.640 111 48 2 132 242 7 98 8.02e-16 75.1
MS.gene049345.t1 AT1G63030 39.640 111 48 2 132 242 7 98 8.02e-16 75.1
MS.gene049345.t1 AT1G71130 57.812 64 22 1 170 228 76 139 1.27e-15 73.9
MS.gene049345.t1 AT5G61590 68.254 63 19 1 168 229 102 164 3.29e-15 73.9
MS.gene049345.t1 AT1G22810 35.507 138 75 4 167 299 8 136 4.18e-15 72.0
MS.gene049345.t1 AT1G77200 59.155 71 28 1 173 243 43 112 6.15e-15 73.9
MS.gene049345.t1 AT1G04370 67.188 64 20 1 172 234 19 82 1.04e-14 70.9
MS.gene049345.t1 AT2G38340 40.741 108 53 3 172 268 69 176 2.11e-14 72.4
MS.gene049345.t1 AT1G06160 65.625 64 21 1 171 233 80 143 4.52e-14 71.6
MS.gene049345.t1 AT1G33760 63.333 60 22 0 173 232 20 79 5.07e-14 70.1
MS.gene049345.t1 AT2G40220 65.000 60 21 0 169 228 51 110 2.09e-13 70.9
MS.gene049345.t1 AT1G12610 53.571 56 26 0 173 228 30 85 2.66e-13 68.6
MS.gene049345.t1 AT1G64380 60.274 73 26 1 165 237 128 197 8.89e-13 68.9
MS.gene049345.t1 AT3G25890 64.444 45 16 0 175 219 133 177 1.10e-12 68.6
MS.gene049345.t1 AT3G25890 64.444 45 16 0 175 219 133 177 1.10e-12 68.6
MS.gene049345.t1 AT1G49120 59.574 47 19 0 173 219 87 133 1.23e-12 68.6
MS.gene049345.t1 AT1G77640 58.209 67 27 1 171 237 41 106 2.20e-12 66.6
MS.gene049345.t1 AT1G71520 45.455 66 32 1 172 233 13 78 5.01e-12 63.5
MS.gene049345.t1 AT1G68840 56.140 57 23 1 172 228 64 118 9.24e-12 65.9
MS.gene049345.t1 AT1G68840 56.140 57 23 1 172 228 64 118 9.24e-12 65.9
MS.gene049345.t1 AT1G80580 53.846 78 27 1 160 228 94 171 5.60e-11 62.8

Find 63 sgRNAs with CRISPR-Local

Find 94 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTTTGACTCATATCGTTTC+TGG 0.134577 3.1:-75938147 MS.gene049345:CDS
GTCAGCTGAAATGATCTTTC+CGG 0.239475 3.1:-75938208 MS.gene049345:CDS
GACAAAGACCATGGGGAAAA+TGG 0.294498 3.1:-75937214 MS.gene049345:CDS
TTATGATGATAATGTGATTA+TGG 0.294940 3.1:-75936853 MS.gene049345:CDS
TGCATTTGTTTCTTCTATGC+AGG 0.323066 3.1:-75936772 MS.gene049345:CDS
AACAAGAATAACAAGAGAAA+TGG 0.338558 3.1:-75937315 MS.gene049345:CDS
TGATCTTTCCGGGTTTGAAT+AGG 0.341446 3.1:-75938197 MS.gene049345:CDS
GACAAAGATTGTGTTGTAGA+AGG 0.344837 3.1:+75938024 None:intergenic
CATACTCTTGCTGCTTTGAA+TGG 0.348828 3.1:+75937173 None:intergenic
TCAGCTGAAATGATCTTTCC+GGG 0.353680 3.1:-75938207 MS.gene049345:CDS
CATTCAAAGCAGCAAGAGTA+TGG 0.359272 3.1:-75937172 MS.gene049345:CDS
GATCTTTCCGGGTTTGAATA+GGG 0.363685 3.1:-75938196 MS.gene049345:CDS
AACTATATCAGCGTCACTTT+GGG 0.369074 3.1:+75938113 None:intergenic
GTAGAAAAGTACGAGGAAAC+TGG 0.377693 3.1:+75936741 None:intergenic
AGGGAAGATGATATATTTGT+TGG 0.400680 3.1:-75937949 MS.gene049345:CDS
TTACTTGTTGTTGGCAAAGC+AGG 0.402927 3.1:+75937898 None:intergenic
ATTTGGTGCTTACTTGTTGT+TGG 0.413356 3.1:+75937889 None:intergenic
GACATATTGTTGGTGATGTT+TGG 0.418592 3.1:+75938051 None:intergenic
GAACTATATCAGCGTCACTT+TGG 0.425440 3.1:+75938112 None:intergenic
CAGAAAGTTCAAGCATGAAT+AGG 0.431072 3.1:-75937343 MS.gene049345:CDS
GTCGAATGCTGAGAAGAGTT+AGG 0.441356 3.1:+75936927 None:intergenic
GTTCTTCTCTCAAGAGAACT+AGG 0.443989 3.1:-75937969 MS.gene049345:CDS
AAAGGTCTAGTATGAACAAC+AGG 0.456920 3.1:+75936951 None:intergenic
ACAAGAATAACAAGAGAAAT+GGG 0.461167 3.1:-75937314 MS.gene049345:CDS
ACAAAGACCATGGGGAAAAT+GGG 0.467232 3.1:-75937213 MS.gene049345:CDS
TTTCTACTCAGTTGCCACCT+TGG 0.468709 3.1:-75936725 MS.gene049345:CDS
CATCATAATAGTGCAATTCA+AGG 0.473295 3.1:-75938090 MS.gene049345:CDS
GCATTTGTTTCTTCTATGCA+GGG 0.489243 3.1:-75936771 MS.gene049345:CDS
GTAGTAGTAGTAGCTGGTGG+AGG 0.490638 3.1:+75937035 None:intergenic
TGCTGAGAAGAGTTAGGAAA+AGG 0.497086 3.1:+75936933 None:intergenic
GTTGCCACCTTGGTCAACTT+CGG 0.500889 3.1:-75936715 MS.gene049345:CDS
TACTTGTTGTTGGCAAAGCA+GGG 0.501488 3.1:+75937899 None:intergenic
AGCTGCTTCAGCTGTTTCAA+AGG 0.503311 3.1:+75937142 None:intergenic
ATGGAACGTTTCGAATTCAC+CGG 0.511700 3.1:-75937006 MS.gene049345:CDS
AAAGCAGCAAGAGTATGGTT+AGG 0.512639 3.1:-75937167 MS.gene049345:CDS
AGAAGGAGAAGACATATTGT+TGG 0.517884 3.1:+75938041 None:intergenic
ACAGAGAATGTAGTAAGAGA+AGG 0.524432 3.1:-75937266 MS.gene049345:CDS
GCATAATTAGATGAAGAAGA+AGG 0.527566 3.1:+75937997 None:intergenic
TAATAGTGCAATTCAAGGAA+TGG 0.533500 3.1:-75938085 MS.gene049345:CDS
TAGTAGTAGTAGCTGGTGGA+GGG 0.538000 3.1:+75937036 None:intergenic
ATATCAGCGTCACTTTGGGT+TGG 0.542704 3.1:+75938117 None:intergenic
GTTGGCGATTTCAAATTCCT+CGG 0.544131 3.1:-75937931 MS.gene049345:CDS
TTGAAAATTGATCATCTAGA+CGG 0.545243 3.1:+75936678 None:intergenic
GATGATGACAAAGAAGAAGC+TGG 0.563016 3.1:+75936801 None:intergenic
TCATAAACATTCCTTGCAGA+AGG 0.570205 3.1:+75936870 None:intergenic
TTACATGTGTATGTTAAAGG+TGG 0.575019 3.1:-75938286 None:intergenic
ATCATTTCAGCTGACAATGT+AGG 0.579346 3.1:+75938216 None:intergenic
TTCTTCTCTCAAGAGAACTA+GGG 0.579919 3.1:-75937968 MS.gene049345:CDS
AGGAGTGAGACAAAGACCAT+GGG 0.591805 3.1:-75937222 MS.gene049345:CDS
TGTTGTTGGCAAAGCAGGGG+AGG 0.597101 3.1:+75937903 None:intergenic
ACTTGTTGTTGGCAAAGCAG+GGG 0.605264 3.1:+75937900 None:intergenic
TCTCTATCCCTATTCAAACC+CGG 0.612602 3.1:+75938189 None:intergenic
TTTCGGGTATTCCTTCTGCA+AGG 0.616262 3.1:-75936881 MS.gene049345:CDS
GGCGATTTCAAATTCCTCGG+TGG 0.618201 3.1:-75937928 MS.gene049345:CDS
GAGGAGTGAGACAAAGACCA+TGG 0.634731 3.1:-75937223 MS.gene049345:CDS
TGGAACGTTTCGAATTCACC+GGG 0.636608 3.1:-75937005 MS.gene049345:CDS
GAAGCAAAGAGAAAATACAG+AGG 0.659331 3.1:-75937242 MS.gene049345:CDS
CTATGATCCGAAGTTGACCA+AGG 0.684304 3.1:+75936708 None:intergenic
GTAATAGAAACAATTGAACC+CGG 0.689937 3.1:+75936987 None:intergenic
TGATCCGAAGTTGACCAAGG+TGG 0.715416 3.1:+75936711 None:intergenic
CAACTGAGTAGAAAAGTACG+AGG 0.723485 3.1:+75936734 None:intergenic
GGAGTGAGACAAAGACCATG+GGG 0.727396 3.1:-75937221 MS.gene049345:CDS
AAGCAGGGGAGGAACCACCG+AGG 0.764284 3.1:+75937914 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAATAAATTGAAGAAAA+AGG + chr3.1:75937113-75937132 None:intergenic 10.0%
!! TTAAAGAAAATACATAAAAT+TGG + chr3.1:75937321-75937340 None:intergenic 10.0%
!! AAAAGGAGAAATATTTAATT+TGG + chr3.1:75937096-75937115 None:intergenic 15.0%
!! AGTTAAATGTAATTATATGT+TGG + chr3.1:75937485-75937504 None:intergenic 15.0%
!! TAATAATGTAAGTATAACTT+AGG - chr3.1:75937409-75937428 MS.gene049345:intron 15.0%
!!! ATAATAAGCTTTGTATTTAA+TGG + chr3.1:75937581-75937600 None:intergenic 15.0%
!!! ATATATGGTTTGTATATTTA+AGG - chr3.1:75937542-75937561 MS.gene049345:intron 15.0%
!!! TTTATTTTTTAACTGAACTT+TGG + chr3.1:75937215-75937234 None:intergenic 15.0%
!! AAGAAAATACATAAAATTGG+TGG + chr3.1:75937318-75937337 None:intergenic 20.0%
!! TAAATAAATTGAAGTCAGAT+CGG - chr3.1:75937231-75937250 MS.gene049345:CDS 20.0%
!! TTGTCTTTACTTCATATATA+TGG - chr3.1:75937527-75937546 MS.gene049345:intron 20.0%
!!! TTATGATGATAATGTGATTA+TGG - chr3.1:75938112-75938131 MS.gene049345:CDS 20.0%
! AACAAGAATAACAAGAGAAA+TGG - chr3.1:75937650-75937669 MS.gene049345:intron 25.0%
! ACAAGAATAACAAGAGAAAT+GGG - chr3.1:75937651-75937670 MS.gene049345:intron 25.0%
!! TTATGATCGTTTTCAGTTTT+CGG - chr3.1:75938067-75938086 MS.gene049345:CDS 25.0%
AGGGAAGATGATATATTTGT+TGG - chr3.1:75937016-75937035 MS.gene049345:CDS 30.0%
CATCATAATAGTGCAATTCA+AGG - chr3.1:75936875-75936894 MS.gene049345:CDS 30.0%
GCATAATTAGATGAAGAAGA+AGG + chr3.1:75936971-75936990 None:intergenic 30.0%
GTAATAGAAACAATTGAACC+CGG + chr3.1:75937981-75938000 None:intergenic 30.0%
TAATAGTGCAATTCAAGGAA+TGG - chr3.1:75936880-75936899 MS.gene049345:CDS 30.0%
! TACGAAGTGTAACATTTTCA+GGG + chr3.1:75937908-75937927 None:intergenic 30.0%
! TATGATCGTTTTCAGTTTTC+GGG - chr3.1:75938068-75938087 MS.gene049345:CDS 30.0%
! TTACGAAGTGTAACATTTTC+AGG + chr3.1:75937909-75937928 None:intergenic 30.0%
!! ATTTTCAGGGAAATTGAGTT+TGG + chr3.1:75937895-75937914 None:intergenic 30.0%
AAACCATGTATAACCTTGAG+GGG - chr3.1:75937276-75937295 MS.gene049345:CDS 35.0%
AAAGGTCTAGTATGAACAAC+AGG + chr3.1:75938017-75938036 None:intergenic 35.0%
ACAGAGAATGTAGTAAGAGA+AGG - chr3.1:75937699-75937718 MS.gene049345:intron 35.0%
AGAAGGAGAAGACATATTGT+TGG + chr3.1:75936927-75936946 None:intergenic 35.0%
ATCATTTCAGCTGACAATGT+AGG + chr3.1:75936752-75936771 None:intergenic 35.0%
CAAACCATGTATAACCTTGA+GGG - chr3.1:75937275-75937294 MS.gene049345:CDS 35.0%
CAGAAAGTTCAAGCATGAAT+AGG - chr3.1:75937622-75937641 MS.gene049345:intron 35.0%
CTACTACTACTACTACTCAA+TGG - chr3.1:75937940-75937959 MS.gene049345:CDS 35.0%
GAAGCAAAGAGAAAATACAG+AGG - chr3.1:75937723-75937742 MS.gene049345:intron 35.0%
GACAAAGATTGTGTTGTAGA+AGG + chr3.1:75936944-75936963 None:intergenic 35.0%
TAAATTGAAGTCAGATCGGA+TGG - chr3.1:75937235-75937254 MS.gene049345:CDS 35.0%
TCAAACCATGTATAACCTTG+AGG - chr3.1:75937274-75937293 MS.gene049345:CDS 35.0%
TCATAAACATTCCTTGCAGA+AGG + chr3.1:75938098-75938117 None:intergenic 35.0%
TTACATATATATGCCCCTCA+AGG + chr3.1:75937292-75937311 None:intergenic 35.0%
TTCTTCTCTCAAGAGAACTA+GGG - chr3.1:75936997-75937016 MS.gene049345:CDS 35.0%
! AACTATATCAGCGTCACTTT+GGG + chr3.1:75936855-75936874 None:intergenic 35.0%
! GCATTTGTTTCTTCTATGCA+GGG - chr3.1:75938194-75938213 MS.gene049345:CDS 35.0%
! TGCATTTGTTTCTTCTATGC+AGG - chr3.1:75938193-75938212 MS.gene049345:CDS 35.0%
!! ATTTGGTGCTTACTTGTTGT+TGG + chr3.1:75937079-75937098 None:intergenic 35.0%
!! GACATATTGTTGGTGATGTT+TGG + chr3.1:75936917-75936936 None:intergenic 35.0%
ACAAAGACCATGGGGAAAAT+GGG - chr3.1:75937752-75937771 MS.gene049345:intron 40.0%
ATGGAACGTTTCGAATTCAC+CGG - chr3.1:75937959-75937978 MS.gene049345:CDS 40.0%
CATTCAAAGCAGCAAGAGTA+TGG - chr3.1:75937793-75937812 MS.gene049345:intron 40.0%
CGAACTTCTGATTACCAAGT+CGG + chr3.1:75937154-75937173 None:intergenic 40.0%
GAACTATATCAGCGTCACTT+TGG + chr3.1:75936856-75936875 None:intergenic 40.0%
GATCTTTCCGGGTTTGAATA+GGG - chr3.1:75936769-75936788 MS.gene049345:CDS 40.0%
GATGATGACAAAGAAGAAGC+TGG + chr3.1:75938167-75938186 None:intergenic 40.0%
GCTTTGACTCATATCGTTTC+TGG - chr3.1:75936818-75936837 MS.gene049345:CDS 40.0%
GTCAGCTGAAATGATCTTTC+CGG - chr3.1:75936757-75936776 MS.gene049345:CDS 40.0%
GTTCTTCTCTCAAGAGAACT+AGG - chr3.1:75936996-75937015 MS.gene049345:CDS 40.0%
GTTGGCGATTTCAAATTCCT+CGG - chr3.1:75937034-75937053 MS.gene049345:CDS 40.0%
TCAGCTGAAATGATCTTTCC+GGG - chr3.1:75936758-75936777 MS.gene049345:CDS 40.0%
TCTCTATCCCTATTCAAACC+CGG + chr3.1:75936779-75936798 None:intergenic 40.0%
TGAGTAGTAGTAGTAGTAGC+TGG + chr3.1:75937939-75937958 None:intergenic 40.0%
TGATCTTTCCGGGTTTGAAT+AGG - chr3.1:75936768-75936787 MS.gene049345:CDS 40.0%
TGCTGAGAAGAGTTAGGAAA+AGG + chr3.1:75938035-75938054 None:intergenic 40.0%
TTCTGATTACCAAGTCGGTA+GGG + chr3.1:75937149-75937168 None:intergenic 40.0%
! AAAGCAGCAAGAGTATGGTT+AGG - chr3.1:75937798-75937817 MS.gene049345:intron 40.0%
! CAACTGAGTAGAAAAGTACG+AGG + chr3.1:75938234-75938253 None:intergenic 40.0%
! GTAGAAAAGTACGAGGAAAC+TGG + chr3.1:75938227-75938246 None:intergenic 40.0%
!! CATACTCTTGCTGCTTTGAA+TGG + chr3.1:75937795-75937814 None:intergenic 40.0%
!! CGACTTGGTAATCAGAAGTT+CGG - chr3.1:75937152-75937171 MS.gene049345:CDS 40.0%
!! TACTTGTTGTTGGCAAAGCA+GGG + chr3.1:75937069-75937088 None:intergenic 40.0%
!! TTACTTGTTGTTGGCAAAGC+AGG + chr3.1:75937070-75937089 None:intergenic 40.0%
AGGAGTGAGACAAAGACCAT+GGG - chr3.1:75937743-75937762 MS.gene049345:intron 45.0%
ATGCCCCTCAAGGTTATACA+TGG + chr3.1:75937282-75937301 None:intergenic 45.0%
ATTACCAAGTCGGTAGGGTA+AGG + chr3.1:75937144-75937163 None:intergenic 45.0%
CTATGATCCGAAGTTGACCA+AGG + chr3.1:75938260-75938279 None:intergenic 45.0%
CTTCTGATTACCAAGTCGGT+AGG + chr3.1:75937150-75937169 None:intergenic 45.0%
GACAAAGACCATGGGGAAAA+TGG - chr3.1:75937751-75937770 MS.gene049345:intron 45.0%
GTAGTAGTAGTAGTAGCTGG+TGG + chr3.1:75937936-75937955 None:intergenic 45.0%
GTCGAATGCTGAGAAGAGTT+AGG + chr3.1:75938041-75938060 None:intergenic 45.0%
TAGTAGTAGTAGCTGGTGGA+GGG + chr3.1:75937932-75937951 None:intergenic 45.0%
TGGAACGTTTCGAATTCACC+GGG - chr3.1:75937960-75937979 MS.gene049345:CDS 45.0%
TTTCTACTCAGTTGCCACCT+TGG - chr3.1:75938240-75938259 MS.gene049345:CDS 45.0%
! AGCTGCTTCAGCTGTTTCAA+AGG + chr3.1:75937826-75937845 None:intergenic 45.0%
! ATATCAGCGTCACTTTGGGT+TGG + chr3.1:75936851-75936870 None:intergenic 45.0%
! GAAGCTGCTCTTCGTTTTAG+AGG - chr3.1:75937861-75937880 MS.gene049345:intron 45.0%
! TTTCGGGTATTCCTTCTGCA+AGG - chr3.1:75938084-75938103 MS.gene049345:CDS 45.0%
!! ACTTGTTGTTGGCAAAGCAG+GGG + chr3.1:75937068-75937087 None:intergenic 45.0%
GAGGAGTGAGACAAAGACCA+TGG - chr3.1:75937742-75937761 MS.gene049345:intron 50.0%
GGAGTGAGACAAAGACCATG+GGG - chr3.1:75937744-75937763 MS.gene049345:intron 50.0%
GGCGATTTCAAATTCCTCGG+TGG - chr3.1:75937037-75937056 MS.gene049345:CDS 50.0%
GTAGTAGTAGTAGCTGGTGG+AGG + chr3.1:75937933-75937952 None:intergenic 50.0%
GTTGCCACCTTGGTCAACTT+CGG - chr3.1:75938250-75938269 MS.gene049345:CDS 50.0%
TGATCCGAAGTTGACCAAGG+TGG + chr3.1:75938257-75938276 None:intergenic 50.0%
!! TTAGCCTTACCCTACCGACT+TGG - chr3.1:75937137-75937156 MS.gene049345:CDS 50.0%
TGTTGTTGGCAAAGCAGGGG+AGG + chr3.1:75937065-75937084 None:intergenic 55.0%
! TCTGCTGCCCATTTTCCCCA+TGG + chr3.1:75937762-75937781 None:intergenic 55.0%
AAGCAGGGGAGGAACCACCG+AGG + chr3.1:75937054-75937073 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr3.1 gene 75936689 75938298 75936689 ID=MS.gene049345
chr3.1 mRNA 75936689 75938298 75936689 ID=MS.gene049345.t1;Parent=MS.gene049345
chr3.1 exon 75937902 75938298 75937902 ID=MS.gene049345.t1.exon1;Parent=MS.gene049345.t1
chr3.1 CDS 75937902 75938298 75937902 ID=cds.MS.gene049345.t1;Parent=MS.gene049345.t1
chr3.1 exon 75936689 75937368 75936689 ID=MS.gene049345.t1.exon2;Parent=MS.gene049345.t1
chr3.1 CDS 75936689 75937368 75936689 ID=cds.MS.gene049345.t1;Parent=MS.gene049345.t1
Gene Sequence

>MS.gene049345

ATGTTAAAGGTGGCGAATTCAAAAGACAAAGTTGTTATCAAAAGTGAATTCAATGATCATCCTACATTGTCAGCTGAAATGATCTTTCCGGGTTTGAATAGGGATAGAGAGATGTCTGCAATGATCTCAGCTTTGACTCATATCGTTTCTGGAGATGTTCCAACCCAAAGTGACGCTGATATAGTTCATCATAATAGTGCAATTCAAGGAATGGTTTCTTTTACACCAAACATCACCAACAATATGTCTTCTCCTTCTACAACACAATCTTTGTCTTCTCCTTCTTCTTCATCTAATTATGCTACTAGTTCTTCTCTCAAGAGAACTAGGGAAGATGATATATTTGTTGGCGATTTCAAATTCCTCGGTGGTTCCTCCCCTGCTTTGCCAACAACAAGTAAGCACCAAATTAAATATTTCTCCTTTTTCTTCAATTTATTTTTTTGTCTTAGCCTTACCCTACCGACTTGGTAATCAGAAGTTCGGTTAGATAATAAATAAATTGAAGTATAGACTTGATAATCCAAAGTTCAGTTAAAAAATAAATAAATTGAAGTCAGATCGGATGGTTCTACTAGTCATGATTCAAACCATGTATAACCTTGAGGGGCATATATATGTAAAAACCACCAATTTTATGTATTTTCTTTAATTTGTTGTTTGTAACATAAAACATTAGAACATAACAATTCTCAACAAATAAAACATTTTTATTTGAAGTAATAATGTAAGTATAACTTAGGCGTGTTCAATGTAATTATATTCAACTAATTCATTTTCTTAAATTATTCGTCCAACATATAATTACATTTAACTAGTTCATTCACTCAAGTTATTTTTGTCTTTACTTCATATATATGGTTTGTATATTTAAGGTTATGTATGTCTTCCATTAAATACAAAGCTTATTATTTTGATATAATAATGCAGTTGCAGAAAGTTCAAGCATGAATAGGACAGCAACAAGAATAACAAGAGAAATGGGAAATGCAGTGTATGAATATAGAAGAACAGAGAATGTAGTAAGAGAAGGAGAAGCAAAGAGAAAATACAGAGGAGTGAGACAAAGACCATGGGGAAAATGGGCAGCAGAGATAAGAGATCCATTCAAAGCAGCAAGAGTATGGTTAGGAACCTTTGAAACAGCTGAAGCAGCTGCTAGAGCATACGATGAAGCTGCTCTTCGTTTTAGAGGCAACAAAGCCAAACTCAATTTCCCTGAAAATGTTACACTTCGTAACCCTCCACCAGCTACTACTACTACTACTCAATGGAACGTTTCGAATTCACCGGGTTCAATTGTTTCTATTACAACTTCTACTGATCCTGTTGTTCATACTAGACCTTTTCCTAACTCTTCTCAGCATTCGACAAACTTTTATGATCGTTTTCAGTTTTCGGGTATTCCTTCTGCAAGGAATGTTTATGATGATAATGTGATTATGGCTTCTCATCTACAATCTTCATCATCGTCGCCAGCTTCTTCTTTGTCATCATCTTCTTCTGCATTTGTTTCTTCTATGCAGGGCAATACTCCAGTTTCCTCGTACTTTTCTACTCAGTTGCCACCTTGGTCAACTTCGGATCATAGCTCTTCTCCGTCTAGATGA
Protein sequence

>MS.gene049345.t1

MLKVANSKDKVVIKSEFNDHPTLSAEMIFPGLNRDREMSAMISALTHIVSGDVPTQSDADIVHHNSAIQGMVSFTPNITNNMSSPSTTQSLSSPSSSSNYATSSSLKRTREDDIFVGDFKFLGGSSPALPTTIAESSSMNRTATRITREMGNAVYEYRRTENVVREGEAKRKYRGVRQRPWGKWAAEIRDPFKAARVWLGTFETAEAAARAYDEAALRFRGNKAKLNFPENVTLRNPPPATTTTTQWNVSNSPGSIVSITTSTDPVVHTRPFPNSSQHSTNFYDRFQFSGIPSARNVYDDNVIMASHLQSSSSSPASSLSSSSSAFVSSMQGNTPVSSYFSTQLPPWSTSDHSSSPSR