AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene06464

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene06464.t1 MTR_3g095190 81.789 313 18 2 1 279 40 347 4.36e-164 460
MS.gene06464.t1 MTR_8g092460 43.866 269 118 8 1 256 16 264 2.75e-57 186
MS.gene06464.t1 MTR_7g020980 75.000 72 18 0 128 199 43 114 1.25e-32 118
MS.gene06464.t1 MTR_7g021010 73.239 71 19 0 126 196 41 111 9.60e-32 116
MS.gene06464.t1 MTR_7g021010 73.239 71 19 0 126 196 2 72 9.76e-32 115
MS.gene06464.t1 MTR_4g086160 60.185 108 36 3 92 192 45 152 5.93e-30 113
MS.gene06464.t1 MTR_4g086165 82.759 58 10 0 135 192 81 138 1.43e-28 108
MS.gene06464.t1 MTR_2g435590 71.014 69 20 0 133 201 93 161 1.54e-27 107
MS.gene06464.t1 MTR_4g086190 82.456 57 10 0 136 192 96 152 1.66e-27 107
MS.gene06464.t1 MTR_4g086220 82.456 57 10 0 136 192 96 152 1.81e-27 107
MS.gene06464.t1 MTR_8g022820 73.913 69 14 1 129 193 112 180 3.21e-27 109
MS.gene06464.t1 MTR_8g022820 73.913 69 14 1 129 193 113 181 3.35e-27 109
MS.gene06464.t1 MTR_8g022820 73.913 69 14 1 129 193 113 181 3.35e-27 109
MS.gene06464.t1 MTR_2g105380 73.913 69 14 1 129 193 106 174 4.68e-27 108
MS.gene06464.t1 MTR_1g087920 62.500 80 20 2 133 202 74 153 1.90e-25 103
MS.gene06464.t1 MTR_5g009620 45.082 122 52 2 96 202 64 185 3.03e-25 102
MS.gene06464.t1 MTR_2g078680 63.380 71 26 0 129 199 24 94 4.01e-25 100
MS.gene06464.t1 MTR_3g098580 88.889 63 7 0 133 195 73 135 4.17e-25 101
MS.gene06464.t1 MTR_2g014340 63.514 74 24 1 130 200 13 86 6.93e-25 99.0
MS.gene06464.t1 MTR_5g085100 74.138 58 15 0 135 192 45 102 1.34e-24 100
MS.gene06464.t1 MTR_4g100380 62.791 86 26 2 124 203 128 213 1.35e-24 100
MS.gene06464.t1 MTR_4g100450 67.532 77 22 2 122 195 138 214 2.31e-24 100
MS.gene06464.t1 MTR_4g100420 66.234 77 23 2 122 195 141 217 3.13e-24 99.8
MS.gene06464.t1 MTR_2g015040 70.968 62 17 1 132 192 59 120 3.37e-24 96.3
MS.gene06464.t1 MTR_3g053690 75.862 58 14 0 135 192 26 83 6.66e-24 97.1
MS.gene06464.t1 MTR_1g028560 66.176 68 19 1 133 196 112 179 7.46e-24 99.8
MS.gene06464.t1 MTR_4g078710 67.647 68 15 1 136 203 28 88 8.66e-24 96.7
MS.gene06464.t1 MTR_4g088005 46.491 114 54 4 88 196 7 118 9.57e-24 94.0
MS.gene06464.t1 MTR_8g006815 68.254 63 19 1 134 195 94 156 1.78e-23 95.5
MS.gene06464.t1 MTR_8g006825 63.235 68 24 1 134 200 94 161 2.17e-23 95.5
MS.gene06464.t1 MTR_5g085070 70.690 58 17 0 135 192 50 107 3.72e-23 96.7
MS.gene06464.t1 MTR_1g090290 64.286 70 24 1 134 202 111 180 3.75e-23 94.4
MS.gene06464.t1 MTR_8g006840 72.131 61 16 1 136 195 125 185 4.60e-23 94.4
MS.gene06464.t1 MTR_2g438180 61.972 71 26 1 124 193 2 72 5.16e-23 92.4
MS.gene06464.t1 MTR_2g015050 70.968 62 17 1 132 192 130 191 9.46e-23 95.1
MS.gene06464.t1 MTR_4g114570 46.465 99 45 2 134 232 5 95 1.66e-22 93.2
MS.gene06464.t1 MTR_2g103700 66.129 62 21 0 134 195 5 66 2.35e-22 91.7
MS.gene06464.t1 MTR_4g008860 64.516 62 22 0 133 194 5 66 2.88e-22 92.0
MS.gene06464.t1 MTR_3g090760 68.966 58 18 0 134 191 111 168 3.25e-22 95.1
MS.gene06464.t1 MTR_7g081815 66.667 63 20 1 134 195 59 121 4.01e-22 92.0
MS.gene06464.t1 MTR_7g081795 66.667 63 20 1 134 195 58 120 4.14e-22 92.0
MS.gene06464.t1 MTR_4g010640 67.797 59 19 0 134 192 5 63 5.74e-22 91.7
MS.gene06464.t1 MTR_7g081805 66.667 63 20 1 134 195 59 121 6.81e-22 91.3
MS.gene06464.t1 MTR_2g014300 67.692 65 17 1 128 192 11 71 1.09e-21 89.7
MS.gene06464.t1 MTR_1g070070 67.188 64 20 1 135 197 20 83 1.13e-21 89.0
MS.gene06464.t1 MTR_1g048610 65.152 66 22 1 131 195 84 149 1.33e-21 91.3
MS.gene06464.t1 MTR_4g054740 67.692 65 20 1 133 196 94 158 1.39e-21 91.3
MS.gene06464.t1 MTR_3g106290 62.903 62 23 0 133 194 5 66 1.44e-21 90.1
MS.gene06464.t1 MTR_6g033255 83.333 66 11 0 131 196 15 80 2.17e-21 90.1
MS.gene06464.t1 MTR_1g074310 64.615 65 22 1 129 192 14 78 2.23e-21 88.2
MS.gene06464.t1 MTR_4g054360 68.750 64 19 1 134 196 122 185 2.68e-21 91.3
MS.gene06464.t1 MTR_7g046260 59.155 71 28 1 136 206 61 130 5.60e-21 89.7
MS.gene06464.t1 MTR_7g117690 54.795 73 32 1 136 208 28 99 5.62e-21 87.8
MS.gene06464.t1 MTR_8g006410 57.534 73 30 1 136 208 52 123 7.13e-21 88.6
MS.gene06464.t1 MTR_7g096700 72.131 61 16 1 133 192 17 77 8.33e-21 86.7
MS.gene06464.t1 MTR_3g110205 55.128 78 34 1 127 204 34 110 1.15e-20 87.4
MS.gene06464.t1 MTR_6g088405 65.517 58 20 0 136 193 44 101 1.18e-20 88.2
MS.gene06464.t1 MTR_7g092190 56.410 78 34 0 132 209 26 103 1.92e-20 89.4
MS.gene06464.t1 MTR_8g102800 67.241 58 19 0 136 193 37 94 1.95e-20 88.2
MS.gene06464.t1 MTR_4g054860 66.154 65 21 1 133 196 128 192 1.99e-20 89.0
MS.gene06464.t1 MTR_8g099215 67.241 58 19 0 134 191 105 162 2.08e-20 89.4
MS.gene06464.t1 MTR_5g062700 67.797 59 19 0 134 192 171 229 2.17e-20 90.1
MS.gene06464.t1 MTR_7g096750 71.667 60 16 1 135 193 19 78 2.63e-20 85.1
MS.gene06464.t1 MTR_3g074130 66.102 59 20 0 134 192 148 206 3.24e-20 89.4
MS.gene06464.t1 MTR_2g101340 62.069 58 22 0 136 193 41 98 4.44e-20 86.3
MS.gene06464.t1 MTR_1g090170 60.606 66 26 0 127 192 230 295 4.61e-20 89.7
MS.gene06464.t1 MTR_1g090170 60.606 66 26 0 127 192 143 208 4.66e-20 88.6
MS.gene06464.t1 MTR_8g013860 45.833 96 50 2 136 231 47 140 4.91e-20 86.3
MS.gene06464.t1 MTR_7g085810 59.091 66 27 0 135 200 29 94 5.68e-20 87.4
MS.gene06464.t1 MTR_2g089170 62.903 62 22 1 136 197 65 125 5.80e-20 85.5
MS.gene06464.t1 MTR_1g098460 60.000 135 43 3 70 195 66 198 6.13e-20 89.0
MS.gene06464.t1 MTR_8g069360 68.421 57 18 0 135 191 43 99 8.72e-20 89.0
MS.gene06464.t1 MTR_5g032820 58.442 77 29 1 135 211 45 118 9.63e-20 88.2
MS.gene06464.t1 MTR_1g074230 64.062 64 22 1 135 197 18 81 1.10e-19 83.6
MS.gene06464.t1 MTR_0939s0010 46.809 94 49 1 136 229 65 157 1.18e-19 85.1
MS.gene06464.t1 MTR_5g016750 53.623 69 32 0 131 199 20 88 1.35e-19 84.7
MS.gene06464.t1 MTR_8g090350 64.407 59 21 0 134 192 111 169 1.45e-19 86.7
MS.gene06464.t1 MTR_4g100650 63.793 58 21 0 136 193 74 131 1.45e-19 86.3
MS.gene06464.t1 MTR_7g096810 61.628 86 26 3 129 207 2 87 1.60e-19 82.8
MS.gene06464.t1 MTR_5g075570 63.158 57 21 0 136 192 124 180 1.82e-19 86.3
MS.gene06464.t1 MTR_3g102100 62.069 58 22 0 136 193 45 102 1.95e-19 84.0
MS.gene06464.t1 MTR_2g090235 63.333 60 22 0 134 193 216 275 2.28e-19 87.8
MS.gene06464.t1 MTR_5g082950 64.407 59 21 0 133 191 63 121 2.98e-19 86.7
MS.gene06464.t1 MTR_1g019110 59.677 62 25 0 132 193 40 101 3.87e-19 83.2
MS.gene06464.t1 MTR_4g035430 56.452 62 27 0 136 197 32 93 4.22e-19 84.3
MS.gene06464.t1 MTR_6g029180 53.425 73 34 0 128 200 25 97 4.74e-19 85.9
MS.gene06464.t1 MTR_5g012910 62.069 58 22 0 136 193 28 85 8.45e-19 82.4
MS.gene06464.t1 MTR_1g070020 65.000 60 20 1 133 191 67 126 8.47e-19 83.2
MS.gene06464.t1 MTR_8g027465 50.667 75 35 1 136 208 39 113 9.11e-19 82.0
MS.gene06464.t1 MTR_7g011630 57.143 63 27 0 129 191 35 97 1.26e-18 85.9
MS.gene06464.t1 MTR_5g083340 61.290 62 24 0 132 193 81 142 1.30e-18 85.5
MS.gene06464.t1 MTR_1g069985 63.333 60 21 1 133 191 72 131 1.37e-18 82.8
MS.gene06464.t1 MTR_6g466130 56.164 73 31 1 136 208 66 137 1.48e-18 82.8
MS.gene06464.t1 MTR_1g070000 67.273 55 17 1 138 191 86 140 2.59e-18 82.0
MS.gene06464.t1 MTR_6g012970 58.333 60 25 0 132 191 34 93 3.09e-18 84.3
MS.gene06464.t1 MTR_4g119270 59.649 57 23 0 135 191 52 108 3.10e-18 84.0
MS.gene06464.t1 MTR_1g070015 61.290 62 23 1 131 191 79 140 4.58e-18 81.3
MS.gene06464.t1 MTR_1g074250 56.338 71 29 1 129 197 12 82 5.57e-18 79.0
MS.gene06464.t1 MTR_2g019750 61.404 57 22 0 135 191 49 105 6.00e-18 82.4
MS.gene06464.t1 MTR_1g070045 60.938 64 24 1 129 191 59 122 6.18e-18 79.7
MS.gene06464.t1 MTR_6g037610 87.879 66 8 0 130 195 174 239 6.33e-18 83.6
MS.gene06464.t1 MTR_8g085960 61.017 59 23 0 133 191 22 80 6.60e-18 81.3
MS.gene06464.t1 MTR_7g084370 53.425 73 30 1 135 207 41 109 1.01e-17 81.6
MS.gene06464.t1 MTR_1g070035 61.667 60 22 1 133 191 74 133 1.11e-17 80.1
MS.gene06464.t1 MTR_1g040430 60.656 61 23 1 143 202 118 178 1.24e-17 79.7
MS.gene06464.t1 MTR_6g465430 39.062 128 59 2 81 208 17 125 1.48e-17 80.5
MS.gene06464.t1 MTR_4g111915 58.333 60 25 0 133 192 50 109 2.09e-17 77.4
MS.gene06464.t1 MTR_6g465690 53.425 73 33 1 136 208 63 134 2.22e-17 80.1
MS.gene06464.t1 MTR_6g465850 54.795 73 32 1 136 208 63 134 2.44e-17 80.5
MS.gene06464.t1 MTR_8g023680 65.306 49 17 0 135 183 115 163 2.53e-17 81.3
MS.gene06464.t1 MTR_1g069960 72.881 59 15 1 135 192 26 84 2.65e-17 77.4
MS.gene06464.t1 MTR_5g083330 60.656 61 24 0 133 193 32 92 2.79e-17 80.5
MS.gene06464.t1 MTR_8g032610 50.704 71 35 0 134 204 25 95 3.27e-17 80.5
MS.gene06464.t1 MTR_4g112490 58.333 60 25 0 133 192 50 109 3.67e-17 78.6
MS.gene06464.t1 MTR_6g466000 53.425 73 33 1 136 208 57 128 3.81e-17 79.0
MS.gene06464.t1 MTR_6g465510 53.425 73 33 1 136 208 33 104 6.50e-17 77.8
MS.gene06464.t1 MTR_4g082345 53.030 66 31 0 126 191 38 103 6.88e-17 79.7
MS.gene06464.t1 MTR_1g101600 54.286 70 31 1 136 205 41 109 7.54e-17 77.4
MS.gene06464.t1 MTR_6g465460 53.425 73 33 1 136 208 54 125 7.68e-17 79.0
MS.gene06464.t1 MTR_6g465420 38.281 128 60 2 81 208 17 125 7.95e-17 79.0
MS.gene06464.t1 MTR_5g008590 67.241 58 19 0 136 193 11 68 1.03e-16 77.0
MS.gene06464.t1 MTR_6g465450 52.055 73 34 1 136 208 54 125 1.06e-16 78.2
MS.gene06464.t1 MTR_1g069940 54.118 85 38 1 126 209 85 169 1.16e-16 77.8
MS.gene06464.t1 MTR_1g069945 55.294 85 37 1 126 209 91 175 1.30e-16 77.8
MS.gene06464.t1 MTR_1g014860 54.237 59 27 0 134 192 20 78 1.41e-16 77.0
MS.gene06464.t1 MTR_1g014820 54.237 59 27 0 134 192 25 83 1.69e-16 77.8
MS.gene06464.t1 MTR_2g043050 52.239 67 26 1 136 202 19 79 2.24e-16 76.6
MS.gene06464.t1 MTR_1g014780 54.237 59 27 0 134 192 36 94 2.32e-16 77.0
MS.gene06464.t1 MTR_8g023700 66.667 48 16 0 136 183 117 164 2.54e-16 78.6
MS.gene06464.t1 MTR_1g014800 52.542 59 28 0 134 192 29 87 2.60e-16 76.6
MS.gene06464.t1 MTR_2g016730 53.731 67 29 1 132 196 19 85 3.10e-16 78.2
MS.gene06464.t1 MTR_3g105510 46.154 65 35 0 129 193 30 94 6.44e-16 75.9
MS.gene06464.t1 MTR_6g465530 50.685 73 35 1 136 208 33 104 8.78e-16 74.7
MS.gene06464.t1 MTR_2g043030 50.746 67 27 1 136 202 19 79 9.56e-16 74.7
MS.gene06464.t1 MTR_1g023170 60.000 70 25 1 132 201 36 102 1.02e-15 75.9
MS.gene06464.t1 MTR_6g466020 51.389 72 34 1 136 207 43 113 1.08e-15 73.9
MS.gene06464.t1 MTR_1g012470 66.667 60 20 0 133 192 4 63 1.54e-15 73.9
MS.gene06464.t1 MTR_1g097190 56.140 57 24 1 136 191 23 79 1.77e-15 72.4
MS.gene06464.t1 MTR_1g110970 54.098 61 24 1 135 191 96 156 2.15e-15 75.9
MS.gene06464.t1 MTR_7g096830 67.692 65 20 1 133 196 95 159 3.18e-15 73.9
MS.gene06464.t1 MTR_7g070220 58.730 63 19 1 136 191 78 140 3.85e-15 75.5
MS.gene06464.t1 MTR_3g017420 60.784 51 20 0 143 193 2 52 4.84e-15 69.3
MS.gene06464.t1 MTR_6g088425 67.241 58 19 0 136 193 49 106 4.99e-15 73.2
MS.gene06464.t1 MTR_2g043040 44.304 79 38 1 124 202 7 79 6.16e-15 72.8
MS.gene06464.t1 MTR_3g107380 67.797 59 19 0 134 192 6 64 6.79e-15 72.4
MS.gene06464.t1 MTR_7g096780 55.952 84 36 1 133 215 82 165 8.07e-15 72.8
MS.gene06464.t1 MTR_5g008540 50.000 58 29 0 138 195 26 83 1.16e-14 68.9
MS.gene06464.t1 MTR_5g085125 55.172 58 26 0 135 192 15 72 1.49e-14 70.5
MS.gene06464.t1 MTR_3g112440 65.517 58 20 0 136 193 39 96 1.95e-14 71.2
MS.gene06464.t1 MTR_1g105400 58.333 48 20 0 135 182 114 161 1.97e-14 73.2
MS.gene06464.t1 MTR_5g008470 44.304 79 33 1 117 195 67 134 2.09e-14 70.5
MS.gene06464.t1 MTR_1g006660 61.194 67 23 1 136 202 47 110 2.10e-14 72.0
MS.gene06464.t1 MTR_4g102670 50.588 85 32 3 136 220 15 89 2.72e-14 69.7
MS.gene06464.t1 MTR_5g057810 73.171 41 11 0 135 175 87 127 3.19e-14 72.0
MS.gene06464.t1 MTR_5g057647 73.171 41 11 0 135 175 87 127 3.19e-14 72.0
MS.gene06464.t1 MTR_2g043020 47.761 67 29 1 136 202 19 79 6.73e-14 69.3
MS.gene06464.t1 MTR_1g074370 61.538 65 24 1 133 196 70 134 2.40e-13 68.2
MS.gene06464.t1 MTR_5g008790 51.613 62 28 1 134 193 16 77 2.95e-13 66.6
MS.gene06464.t1 MTR_1g043350 66.102 59 19 1 134 191 80 138 3.85e-13 67.8
MS.gene06464.t1 MTR_3g105480 50.000 56 28 0 138 193 33 88 4.71e-13 67.4
MS.gene06464.t1 MTR_2g085015 51.562 64 29 2 136 197 47 110 6.75e-13 67.0
MS.gene06464.t1 MTR_5g008550 47.945 73 37 1 136 208 21 92 6.83e-13 66.2
MS.gene06464.t1 MTR_7g028925 52.632 57 24 1 136 192 29 82 9.60e-13 63.5
MS.gene06464.t1 MTR_5g009410 64.706 68 21 1 133 200 114 178 4.55e-12 65.9
MS.gene06464.t1 MTR_5g058470 49.438 89 38 2 131 218 91 173 5.52e-12 65.5
MS.gene06464.t1 MTR_4g009260 66.102 59 20 0 133 191 74 132 6.01e-12 63.9
MS.gene06464.t1 MTR_1g093600 57.143 56 22 1 135 190 63 116 2.45e-11 63.9
MS.gene06464.t1 MTR_5g053920 49.275 69 29 2 127 191 53 119 3.52e-11 63.5
MS.gene06464.t1 MTR_5g010940 47.222 72 31 2 136 200 54 125 5.02e-11 61.6
MS.gene06464.t1 MTR_5g010930 48.438 64 27 1 136 193 49 112 7.19e-11 61.2
MS.gene06464.t1 MTR_3g072610 55.556 63 26 1 132 192 21 83 8.83e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene06464.t1 AT5G61890 84.615 65 10 0 133 197 87 151 1.23e-33 123
MS.gene06464.t1 AT5G13330 69.767 86 19 2 133 218 36 114 9.60e-33 120
MS.gene06464.t1 AT2G33710 72.727 77 17 1 133 205 67 143 4.07e-32 119
MS.gene06464.t1 AT2G33710 72.727 77 17 1 133 205 67 143 4.08e-32 118
MS.gene06464.t1 AT5G64750 59.048 105 33 1 143 237 192 296 3.51e-31 120
MS.gene06464.t1 AT2G47520 42.000 150 64 4 128 275 40 168 7.80e-30 111
MS.gene06464.t1 AT5G50080 44.162 197 60 5 1 197 1 147 6.88e-28 107
MS.gene06464.t1 AT5G50080 61.404 114 33 2 84 197 36 138 1.13e-27 107
MS.gene06464.t1 AT1G43160 89.231 65 7 0 131 195 56 120 4.72e-27 104
MS.gene06464.t1 AT5G07310 84.615 65 10 0 133 197 89 153 1.15e-26 105
MS.gene06464.t1 AT1G72360 62.162 74 28 0 135 208 24 97 2.90e-26 103
MS.gene06464.t1 AT1G72360 58.537 82 32 1 129 208 67 148 3.28e-26 104
MS.gene06464.t1 AT1G72360 58.537 82 32 1 129 208 65 146 3.46e-26 104
MS.gene06464.t1 AT4G11140 62.667 75 21 1 134 208 85 152 1.24e-25 103
MS.gene06464.t1 AT1G28370 71.875 64 17 1 129 192 52 114 1.95e-25 100
MS.gene06464.t1 AT1G28370 71.875 64 17 1 129 192 14 76 2.27e-25 99.4
MS.gene06464.t1 AT5G47220 65.789 76 25 1 134 208 115 190 2.43e-25 101
MS.gene06464.t1 AT3G16770 74.603 63 14 1 133 193 74 136 2.84e-25 101
MS.gene06464.t1 AT5G47230 74.242 66 16 1 131 195 151 216 1.28e-24 100
MS.gene06464.t1 AT1G03800 72.414 58 16 0 135 192 52 109 1.51e-24 99.4
MS.gene06464.t1 AT3G15210 71.429 63 18 0 135 197 24 86 1.71e-24 98.6
MS.gene06464.t1 AT4G17500 70.000 70 20 1 134 202 146 215 1.72e-24 99.8
MS.gene06464.t1 AT4G17490 66.667 75 24 1 127 200 128 202 5.23e-24 99.0
MS.gene06464.t1 AT5G44210 75.439 57 14 0 136 192 33 89 9.52e-24 96.3
MS.gene06464.t1 AT5G51190 66.197 71 22 2 123 192 60 129 9.78e-24 96.7
MS.gene06464.t1 AT4G27950 51.923 104 38 3 130 230 112 206 1.58e-23 98.6
MS.gene06464.t1 AT2G22200 59.740 77 30 1 133 208 68 144 1.66e-23 97.1
MS.gene06464.t1 AT3G20310 50.505 99 44 2 135 232 26 120 4.49e-23 95.5
MS.gene06464.t1 AT2G44840 70.968 62 17 1 135 195 91 152 6.13e-23 94.7
MS.gene06464.t1 AT1G15360 67.213 61 20 0 134 194 5 65 7.05e-23 94.0
MS.gene06464.t1 AT1G15360 67.213 61 20 0 134 194 5 65 7.05e-23 94.0
MS.gene06464.t1 AT1G50640 72.414 58 16 0 135 192 27 84 1.39e-22 93.6
MS.gene06464.t1 AT5G61600 66.667 63 20 1 134 195 86 148 2.33e-22 93.6
MS.gene06464.t1 AT5G53290 61.972 71 27 0 121 191 110 180 2.65e-22 95.5
MS.gene06464.t1 AT1G28360 67.742 62 20 0 136 197 12 73 3.70e-22 91.7
MS.gene06464.t1 AT4G23750 65.000 60 21 0 132 191 118 177 5.89e-22 94.4
MS.gene06464.t1 AT4G23750 65.000 60 21 0 132 191 118 177 5.89e-22 94.4
MS.gene06464.t1 AT4G28140 56.757 74 32 0 123 196 130 203 1.08e-21 92.8
MS.gene06464.t1 AT5G43410 67.188 64 20 1 135 197 14 77 1.26e-21 88.6
MS.gene06464.t1 AT5G65130 64.516 62 22 0 134 195 109 170 1.72e-21 92.0
MS.gene06464.t1 AT5G65130 64.516 62 22 0 134 195 111 172 1.82e-21 92.0
MS.gene06464.t1 AT3G57600 59.459 74 28 1 135 208 27 98 1.87e-21 91.7
MS.gene06464.t1 AT4G13620 61.111 72 28 0 122 193 218 289 1.88e-21 93.6
MS.gene06464.t1 AT3G23230 71.186 59 16 1 135 192 19 77 1.93e-21 88.2
MS.gene06464.t1 AT4G39780 64.516 62 22 0 132 193 89 150 2.02e-21 91.7
MS.gene06464.t1 AT1G71450 65.517 58 20 0 136 193 24 81 2.03e-21 89.4
MS.gene06464.t1 AT3G60490 57.534 73 31 0 121 193 56 128 2.04e-21 91.3
MS.gene06464.t1 AT2G46310 61.111 72 22 1 135 206 98 163 2.10e-21 92.0
MS.gene06464.t1 AT5G25390 64.407 59 21 0 134 192 5 63 2.99e-21 89.4
MS.gene06464.t1 AT5G07580 61.644 73 26 2 121 192 96 167 3.45e-21 89.4
MS.gene06464.t1 AT4G06746 45.745 94 36 2 117 195 2 95 3.69e-21 87.8
MS.gene06464.t1 AT1G12980 41.007 139 63 5 123 261 44 163 6.07e-21 91.3
MS.gene06464.t1 AT1G22190 65.000 60 21 0 134 193 81 140 6.29e-21 90.1
MS.gene06464.t1 AT2G35700 59.420 69 27 1 136 204 45 112 7.43e-21 88.2
MS.gene06464.t1 AT5G25190 61.290 62 24 0 133 194 5 66 8.01e-21 87.8
MS.gene06464.t1 AT3G61630 45.833 120 40 4 77 191 61 160 1.05e-20 90.5
MS.gene06464.t1 AT1G36060 66.102 59 20 0 134 192 141 199 1.14e-20 90.1
MS.gene06464.t1 AT2G20880 58.571 70 29 0 132 201 183 252 1.44e-20 90.5
MS.gene06464.t1 AT3G16280 59.155 71 28 1 136 206 79 148 2.61e-20 88.2
MS.gene06464.t1 AT1G78080 66.102 59 20 0 134 192 150 208 2.87e-20 89.4
MS.gene06464.t1 AT3G50260 35.821 134 80 2 133 262 18 149 3.07e-20 85.5
MS.gene06464.t1 AT3G16280 59.155 71 28 1 136 206 61 130 3.19e-20 87.4
MS.gene06464.t1 AT2G25820 56.164 73 31 1 136 208 26 97 3.20e-20 87.4
MS.gene06464.t1 AT4G32800 57.576 66 28 0 128 193 11 76 3.28e-20 87.0
MS.gene06464.t1 AT1G75490 55.844 77 27 2 136 207 42 116 4.69e-20 86.3
MS.gene06464.t1 AT1G01250 54.930 71 31 1 136 206 45 114 5.75e-20 85.9
MS.gene06464.t1 AT4G34410 82.456 57 10 0 136 192 136 192 6.90e-20 87.4
MS.gene06464.t1 AT4G16750 50.000 84 41 1 122 205 26 108 8.13e-20 85.1
MS.gene06464.t1 AT4G36900 62.069 58 22 0 136 193 30 87 8.62e-20 85.5
MS.gene06464.t1 AT2G23340 62.069 58 22 0 136 193 28 85 1.48e-19 84.3
MS.gene06464.t1 AT4G18450 62.687 67 23 2 134 198 108 174 1.83e-19 86.7
MS.gene06464.t1 AT5G11590 65.517 58 20 0 136 193 51 108 1.93e-19 85.5
MS.gene06464.t1 AT3G11020 65.000 60 21 0 136 195 78 137 1.95e-19 87.0
MS.gene06464.t1 AT5G67190 61.667 60 23 0 134 193 19 78 2.30e-19 84.0
MS.gene06464.t1 AT2G40340 58.333 72 29 1 136 207 14 84 2.31e-19 86.3
MS.gene06464.t1 AT2G40340 58.333 72 29 1 136 207 14 84 2.31e-19 86.3
MS.gene06464.t1 AT2G40340 58.333 72 29 1 136 207 14 84 2.31e-19 86.3
MS.gene06464.t1 AT5G05410 47.525 101 46 4 136 234 79 174 3.77e-19 85.9
MS.gene06464.t1 AT3G23240 62.903 62 22 1 131 191 77 138 3.89e-19 84.3
MS.gene06464.t1 AT2G44940 50.562 89 35 2 130 218 94 173 4.41e-19 85.5
MS.gene06464.t1 AT5G19790 64.407 59 21 0 133 191 19 77 5.18e-19 84.7
MS.gene06464.t1 AT5G05410 45.545 101 48 3 136 234 79 174 5.27e-19 85.9
MS.gene06464.t1 AT5G25390 62.712 59 19 1 134 192 5 60 5.34e-19 83.2
MS.gene06464.t1 AT1G19210 58.333 60 25 0 135 194 11 70 6.35e-19 82.8
MS.gene06464.t1 AT1G24590 66.667 57 19 0 135 191 57 113 7.71e-19 85.1
MS.gene06464.t1 AT1G46768 46.591 88 44 1 109 193 1 88 8.05e-19 81.6
MS.gene06464.t1 AT1G46768 46.591 88 44 1 109 193 1 88 8.05e-19 81.6
MS.gene06464.t1 AT1G46768 46.591 88 44 1 109 193 1 88 8.33e-19 81.3
MS.gene06464.t1 AT2G40340 58.333 72 29 1 136 207 79 149 8.62e-19 85.5
MS.gene06464.t1 AT2G40340 58.333 72 29 1 136 207 72 142 8.80e-19 85.5
MS.gene06464.t1 AT2G40340 58.333 72 29 1 136 207 72 142 9.03e-19 84.7
MS.gene06464.t1 AT2G31230 59.701 67 26 1 131 196 81 147 1.76e-18 82.8
MS.gene06464.t1 AT1G12890 52.439 82 33 2 122 201 11 88 2.04e-18 82.4
MS.gene06464.t1 AT4G25470 52.055 73 35 0 136 208 51 123 2.33e-18 82.0
MS.gene06464.t1 AT1G21910 59.649 57 23 0 136 192 50 106 2.79e-18 82.0
MS.gene06464.t1 AT1G74930 47.436 78 35 1 123 194 2 79 2.80e-18 81.3
MS.gene06464.t1 AT5G13910 47.500 80 38 1 128 207 12 87 2.82e-18 81.6
MS.gene06464.t1 AT5G25810 62.069 58 22 0 136 193 36 93 3.25e-18 81.6
MS.gene06464.t1 AT4G25490 60.606 66 25 1 136 200 48 113 3.31e-18 81.6
MS.gene06464.t1 AT5G18450 62.500 56 21 0 136 191 34 89 5.71e-18 82.8
MS.gene06464.t1 AT4G25480 54.286 70 32 0 136 205 51 120 5.82e-18 80.9
MS.gene06464.t1 AT5G21960 56.250 64 28 0 131 194 2 65 1.07e-17 80.1
MS.gene06464.t1 AT1G22985 62.903 62 20 1 133 191 72 133 1.21e-17 78.6
MS.gene06464.t1 AT5G18560 61.404 57 22 0 135 191 54 110 1.36e-17 82.0
MS.gene06464.t1 AT1G53910 77.049 61 14 0 133 193 122 182 1.57e-17 82.0
MS.gene06464.t1 AT1G53910 77.049 61 14 0 133 193 122 182 1.57e-17 82.0
MS.gene06464.t1 AT1G53910 77.049 61 14 0 133 193 120 180 1.68e-17 82.0
MS.gene06464.t1 AT3G14230 49.580 119 46 3 133 246 121 230 1.81e-17 82.0
MS.gene06464.t1 AT3G14230 49.580 119 46 3 133 246 120 229 1.90e-17 82.0
MS.gene06464.t1 AT3G14230 49.580 119 46 3 133 246 125 234 1.91e-17 82.0
MS.gene06464.t1 AT5G51990 59.091 66 26 1 136 200 54 119 5.39e-17 78.6
MS.gene06464.t1 AT4G31060 52.459 61 29 0 134 194 25 85 6.88e-17 77.4
MS.gene06464.t1 AT2G36450 59.677 62 24 1 136 196 15 76 1.15e-16 76.6
MS.gene06464.t1 AT1G53170 73.684 57 15 0 135 191 30 86 1.71e-16 76.3
MS.gene06464.t1 AT1G28160 63.158 57 21 0 135 191 38 94 1.88e-16 77.4
MS.gene06464.t1 AT1G68550 66.000 50 17 0 133 182 110 159 1.89e-16 78.6
MS.gene06464.t1 AT1G68550 66.000 50 17 0 133 182 110 159 1.89e-16 78.6
MS.gene06464.t1 AT5G67000 53.968 63 29 0 128 190 113 175 2.32e-16 75.9
MS.gene06464.t1 AT2G40350 57.895 57 24 0 136 192 74 130 2.49e-16 75.1
MS.gene06464.t1 AT5G11190 71.186 59 17 0 134 192 5 63 2.70e-16 75.9
MS.gene06464.t1 AT2G40350 57.895 57 24 0 136 192 67 123 3.20e-16 74.7
MS.gene06464.t1 AT3G23220 63.768 69 24 1 135 202 13 81 4.91e-16 73.9
MS.gene06464.t1 AT1G63030 39.640 111 48 2 95 205 7 98 6.07e-16 74.7
MS.gene06464.t1 AT1G63030 39.640 111 48 2 95 205 7 98 6.07e-16 74.7
MS.gene06464.t1 AT1G71130 48.101 79 36 1 118 191 61 139 9.67e-16 73.6
MS.gene06464.t1 AT1G22810 35.211 142 77 4 130 265 8 140 1.95e-15 72.4
MS.gene06464.t1 AT5G61590 68.254 63 19 1 131 192 102 164 2.79e-15 73.2
MS.gene06464.t1 AT1G77200 59.155 71 28 1 136 206 43 112 3.94e-15 73.6
MS.gene06464.t1 AT1G04370 67.188 64 20 1 135 197 19 82 8.14e-15 70.5
MS.gene06464.t1 AT1G06160 65.625 64 21 1 134 196 80 143 2.69e-14 71.2
MS.gene06464.t1 AT1G33760 63.333 60 22 0 136 195 20 79 4.44e-14 69.7
MS.gene06464.t1 AT2G38340 39.815 108 53 3 135 230 69 176 4.95e-14 70.5
MS.gene06464.t1 AT2G40220 65.000 60 21 0 132 191 51 110 1.79e-13 70.1
MS.gene06464.t1 AT1G12610 53.571 56 26 0 136 191 30 85 1.92e-13 68.2
MS.gene06464.t1 AT1G49120 38.043 92 50 1 136 220 87 178 4.12e-13 68.9
MS.gene06464.t1 AT1G64380 60.274 73 26 1 128 200 128 197 8.19e-13 68.2
MS.gene06464.t1 AT3G25890 64.444 45 16 0 138 182 133 177 1.17e-12 67.8
MS.gene06464.t1 AT3G25890 64.444 45 16 0 138 182 133 177 1.17e-12 67.8
MS.gene06464.t1 AT1G77640 58.209 67 27 1 134 200 41 106 2.00e-12 66.2
MS.gene06464.t1 AT1G71520 45.455 66 32 1 135 196 13 78 4.98e-12 62.8
MS.gene06464.t1 AT1G68840 56.140 57 23 1 135 191 64 118 8.84e-12 65.1
MS.gene06464.t1 AT1G68840 56.140 57 23 1 135 191 64 118 8.84e-12 65.1
MS.gene06464.t1 AT1G80580 53.846 78 27 1 123 191 94 171 7.60e-11 61.6
MS.gene06464.t1 AT1G44830 59.016 61 24 1 134 193 33 93 8.54e-11 60.8

Find 55 sgRNAs with CRISPR-Local

Find 88 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTTTGACTCATATCGTTTC+TGG 0.134577 3.2:-79561291 MS.gene06464:CDS
GACAAAGACCATGGGGAAAA+TGG 0.294498 3.2:-79560389 MS.gene06464:CDS
AACAAGAATAACAAGAGAAA+TGG 0.338558 3.2:-79560490 MS.gene06464:CDS
GACAAAGATTGTGTTGTAGA+AGG 0.344837 3.2:+79561168 None:intergenic
CATACTCTTGCTGCTTTGAA+TGG 0.348828 3.2:+79560348 None:intergenic
CATTCAAAGCAGCAAGAGTA+TGG 0.359272 3.2:-79560347 MS.gene06464:CDS
AACTATATCAGCGTCACTTT+GGG 0.369074 3.2:+79561257 None:intergenic
GTAGAAAAGTACGAGGAAAC+TGG 0.377693 3.2:+79559919 None:intergenic
TTACTTGTTGTTGGCAAAGC+AGG 0.402927 3.2:+79561042 None:intergenic
AGGGAAGATGATAGATTTGT+TGG 0.411621 3.2:-79561093 MS.gene06464:CDS
GACATATTGTTGGTGATGTT+TGG 0.418592 3.2:+79561195 None:intergenic
GAACTATATCAGCGTCACTT+TGG 0.425440 3.2:+79561256 None:intergenic
TTGGTGTGCTTACTTGTTGT+TGG 0.427601 3.2:+79561033 None:intergenic
CAGAAAGTTCAAGCATGAAT+AGG 0.431072 3.2:-79560518 MS.gene06464:CDS
GTCGAATGCTGAGAAGAGTT+AGG 0.441356 3.2:+79560105 None:intergenic
GTTCTTCTCTCAAGAGAACT+AGG 0.443989 3.2:-79561113 MS.gene06464:CDS
AAAGGTCTAGTATGAACAAC+AGG 0.456920 3.2:+79560129 None:intergenic
ACAAGAATAACAAGAGAAAT+GGG 0.461167 3.2:-79560489 MS.gene06464:CDS
ACAAAGACCATGGGGAAAAT+GGG 0.467232 3.2:-79560388 MS.gene06464:CDS
TTTCTACTCAGTTGCCACCT+TGG 0.468709 3.2:-79559903 MS.gene06464:CDS
CATCATAATAGTGCAATTCA+AGG 0.473295 3.2:-79561234 MS.gene06464:CDS
TGCTGAGAAGAGTTAGGAAA+AGG 0.497086 3.2:+79560111 None:intergenic
GTTGCCACCTTGGTCAACTT+CGG 0.500889 3.2:-79559893 MS.gene06464:CDS
TACTTGTTGTTGGCAAAGCA+GGG 0.501488 3.2:+79561043 None:intergenic
GTAGTAGTAGTAGCTGGTGG+AGG 0.503347 3.2:+79560210 None:intergenic
ATGGAACGTTTCGAATTCAC+CGG 0.511700 3.2:-79560184 MS.gene06464:CDS
AAAGCAGCAAGAGTATGGTT+AGG 0.512639 3.2:-79560342 MS.gene06464:CDS
AGAAGGAGAAGACATATTGT+TGG 0.517884 3.2:+79561185 None:intergenic
AGCTGCTTCAGCAGTTTCAA+AGG 0.523875 3.2:+79560317 None:intergenic
ACAGAGAATGTAGTAAGAGA+AGG 0.524432 3.2:-79560441 MS.gene06464:CDS
GCATAATTAGATGAAGAAGA+AGG 0.527566 3.2:+79561141 None:intergenic
CATTGAGTAGTAGTAGTAGC+TGG 0.538997 3.2:+79560204 None:intergenic
CAGCTACTACTACTACTCAA+TGG 0.541524 3.2:-79560203 MS.gene06464:CDS
ATATCAGCGTCACTTTGGGT+TGG 0.542704 3.2:+79561261 None:intergenic
GTTGGCGATTTCAAATTCCT+CGG 0.544131 3.2:-79561075 MS.gene06464:CDS
TAGTAGTAGTAGCTGGTGGA+GGG 0.544536 3.2:+79560211 None:intergenic
TTGAAAATTGATCATCTAGA+CGG 0.545243 3.2:+79559856 None:intergenic
TAATAGTGCAATTCAAGGAA+CGG 0.568277 3.2:-79561229 MS.gene06464:CDS
TCATAAACATTCCTTGCAGA+AGG 0.570205 3.2:+79560048 None:intergenic
TTCTTCTCTCAAGAGAACTA+GGG 0.579919 3.2:-79561112 MS.gene06464:CDS
AGGAGTGAGACAAAGACCAT+GGG 0.591805 3.2:-79560397 MS.gene06464:CDS
TGTTGTTGGCAAAGCAGGGG+AGG 0.597101 3.2:+79561047 None:intergenic
ACTTGTTGTTGGCAAAGCAG+GGG 0.605264 3.2:+79561044 None:intergenic
TTTCGGGTATTCCTTCTGCA+AGG 0.616262 3.2:-79560059 MS.gene06464:CDS
GGCGATTTCAAATTCCTCGG+TGG 0.618201 3.2:-79561072 MS.gene06464:CDS
GAGGAGTGAGACAAAGACCA+TGG 0.634731 3.2:-79560398 MS.gene06464:CDS
TGGAACGTTTCGAATTCACC+GGG 0.636608 3.2:-79560183 MS.gene06464:CDS
TGAGTAGTAGTAGTAGCTGG+TGG 0.652788 3.2:+79560207 None:intergenic
GAAGCAAAGAGAAAATACAG+AGG 0.659331 3.2:-79560417 MS.gene06464:CDS
CTATGATCCGAAGTTGACCA+AGG 0.684304 3.2:+79559886 None:intergenic
GTAATAGAAACAATTGAACC+CGG 0.689937 3.2:+79560165 None:intergenic
TGATCCGAAGTTGACCAAGG+TGG 0.715416 3.2:+79559889 None:intergenic
CAACTGAGTAGAAAAGTACG+AGG 0.723485 3.2:+79559912 None:intergenic
GGAGTGAGACAAAGACCATG+GGG 0.727396 3.2:-79560396 MS.gene06464:CDS
AAGCAGGGGAGGAACCACCG+AGG 0.764284 3.2:+79561058 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAAAGAAAATACATAAAAT+TGG + chr3.2:79560391-79560410 None:intergenic 10.0%
!! AAGAAGAGAAATATTTAATT+TGG + chr3.2:79560165-79560184 None:intergenic 15.0%
!! TAATAATGTAAGTATAACTT+AGG - chr3.2:79560479-79560498 MS.gene06464:CDS 15.0%
!!! ATAATAAGCTTTGTATTTAA+TGG + chr3.2:79560617-79560636 None:intergenic 15.0%
!!! ATATATGGTTTGTATATTTA+AGG - chr3.2:79560578-79560597 MS.gene06464:intron 15.0%
!! AAGAAAATACATAAAATTGG+TGG + chr3.2:79560388-79560407 None:intergenic 20.0%
!! AAGTAAAGACAAAAATATGT+TGG + chr3.2:79560555-79560574 None:intergenic 20.0%
!! TAAATAAATTGAAGTCAGAT+CGG - chr3.2:79560301-79560320 MS.gene06464:CDS 20.0%
!! TTGTCTTTACTTCATATATA+TGG - chr3.2:79560563-79560582 MS.gene06464:intron 20.0%
!!! TTATGATGATAATGTGATTA+TGG - chr3.2:79561145-79561164 MS.gene06464:CDS 20.0%
!!! TTTATTTTTTAACCGAACTT+TGG + chr3.2:79560285-79560304 None:intergenic 20.0%
! AACAAGAATAACAAGAGAAA+TGG - chr3.2:79560686-79560705 MS.gene06464:intron 25.0%
! ACAAGAATAACAAGAGAAAT+GGG - chr3.2:79560687-79560706 MS.gene06464:intron 25.0%
!! TTATGATCGTTTTCAGTTTT+CGG - chr3.2:79561100-79561119 MS.gene06464:CDS 25.0%
CATCATAATAGTGCAATTCA+AGG - chr3.2:79559942-79559961 MS.gene06464:intron 30.0%
GCATAATTAGATGAAGAAGA+AGG + chr3.2:79560038-79560057 None:intergenic 30.0%
GTAATAGAAACAATTGAACC+CGG + chr3.2:79561014-79561033 None:intergenic 30.0%
TAATAGTGCAATTCAAGGAA+CGG - chr3.2:79559947-79559966 MS.gene06464:intron 30.0%
! AGACTTGATAATCCAAAGTT+CGG - chr3.2:79560270-79560289 MS.gene06464:CDS 30.0%
! TACGAAGTGTAACATTTTCA+GGG + chr3.2:79560944-79560963 None:intergenic 30.0%
! TATGATCGTTTTCAGTTTTC+GGG - chr3.2:79561101-79561120 MS.gene06464:CDS 30.0%
! TTACGAAGTGTAACATTTTC+AGG + chr3.2:79560945-79560964 None:intergenic 30.0%
!! ATTTTCAGGGAAATTGAGTT+TGG + chr3.2:79560931-79560950 None:intergenic 30.0%
AAAGGTCTAGTATGAACAAC+AGG + chr3.2:79561050-79561069 None:intergenic 35.0%
ACAGAGAATGTAGTAAGAGA+AGG - chr3.2:79560735-79560754 MS.gene06464:intron 35.0%
AGAAGGAGAAGACATATTGT+TGG + chr3.2:79559994-79560013 None:intergenic 35.0%
AGGGAAGATGATAGATTTGT+TGG - chr3.2:79560083-79560102 MS.gene06464:CDS 35.0%
CAGAAAGTTCAAGCATGAAT+AGG - chr3.2:79560658-79560677 MS.gene06464:intron 35.0%
GAAGCAAAGAGAAAATACAG+AGG - chr3.2:79560759-79560778 MS.gene06464:intron 35.0%
GACAAAGATTGTGTTGTAGA+AGG + chr3.2:79560011-79560030 None:intergenic 35.0%
TAAATTGAAGTCAGATCGGA+TGG - chr3.2:79560305-79560324 MS.gene06464:CDS 35.0%
TCATAAACATTCCTTGCAGA+AGG + chr3.2:79561131-79561150 None:intergenic 35.0%
TTACATATATATGCCCCTCA+AGG + chr3.2:79560362-79560381 None:intergenic 35.0%
TTCTTCTCTCAAGAGAACTA+GGG - chr3.2:79560064-79560083 MS.gene06464:CDS 35.0%
! AACTATATCAGCGTCACTTT+GGG + chr3.2:79559922-79559941 None:intergenic 35.0%
! GCATTTGTTTCTTCTATGCA+GGG - chr3.2:79561227-79561246 MS.gene06464:CDS 35.0%
! TGCATTTGTTTCTTCTATGC+AGG - chr3.2:79561226-79561245 MS.gene06464:CDS 35.0%
!! GACATATTGTTGGTGATGTT+TGG + chr3.2:79559984-79560003 None:intergenic 35.0%
AAACCATGTACAACCTTGAG+GGG - chr3.2:79560346-79560365 MS.gene06464:CDS 40.0%
ACAAAGACCATGGGGAAAAT+GGG - chr3.2:79560788-79560807 MS.gene06464:intron 40.0%
ATGGAACGTTTCGAATTCAC+CGG - chr3.2:79560992-79561011 MS.gene06464:intron 40.0%
CAAACCATGTACAACCTTGA+GGG - chr3.2:79560345-79560364 MS.gene06464:CDS 40.0%
CAGCTACTACTACTACTCAA+TGG - chr3.2:79560973-79560992 MS.gene06464:intron 40.0%
CATTCAAAGCAGCAAGAGTA+TGG - chr3.2:79560829-79560848 MS.gene06464:intron 40.0%
CATTGAGTAGTAGTAGTAGC+TGG + chr3.2:79560975-79560994 None:intergenic 40.0%
CGAACTTCTGATTACCAAGT+CGG + chr3.2:79560224-79560243 None:intergenic 40.0%
GAACTATATCAGCGTCACTT+TGG + chr3.2:79559923-79559942 None:intergenic 40.0%
GATGATGACAAAGAAGAAGC+TGG + chr3.2:79561200-79561219 None:intergenic 40.0%
GCTTTGACTCATATCGTTTC+TGG - chr3.2:79559885-79559904 MS.gene06464:CDS 40.0%
GTTCTTCTCTCAAGAGAACT+AGG - chr3.2:79560063-79560082 MS.gene06464:CDS 40.0%
GTTGGCGATTTCAAATTCCT+CGG - chr3.2:79560101-79560120 MS.gene06464:CDS 40.0%
TCAAACCATGTACAACCTTG+AGG - chr3.2:79560344-79560363 MS.gene06464:CDS 40.0%
TGCTGAGAAGAGTTAGGAAA+AGG + chr3.2:79561068-79561087 None:intergenic 40.0%
TTCTGATTACCAAGTCGGTA+GGG + chr3.2:79560219-79560238 None:intergenic 40.0%
! AAAGCAGCAAGAGTATGGTT+AGG - chr3.2:79560834-79560853 MS.gene06464:intron 40.0%
! CAACTGAGTAGAAAAGTACG+AGG + chr3.2:79561267-79561286 None:intergenic 40.0%
! GTAGAAAAGTACGAGGAAAC+TGG + chr3.2:79561260-79561279 None:intergenic 40.0%
!! CATACTCTTGCTGCTTTGAA+TGG + chr3.2:79560831-79560850 None:intergenic 40.0%
!! CGACTTGGTAATCAGAAGTT+CGG - chr3.2:79560222-79560241 MS.gene06464:CDS 40.0%
!! TACTTGTTGTTGGCAAAGCA+GGG + chr3.2:79560136-79560155 None:intergenic 40.0%
!! TTACTTGTTGTTGGCAAAGC+AGG + chr3.2:79560137-79560156 None:intergenic 40.0%
!! TTGGTGTGCTTACTTGTTGT+TGG + chr3.2:79560146-79560165 None:intergenic 40.0%
AGCTGCTTCAGCAGTTTCAA+AGG + chr3.2:79560862-79560881 None:intergenic 45.0%
AGGAGTGAGACAAAGACCAT+GGG - chr3.2:79560779-79560798 MS.gene06464:intron 45.0%
ATTACCAAGTCGGTAGGGTA+AGG + chr3.2:79560214-79560233 None:intergenic 45.0%
CTATGATCCGAAGTTGACCA+AGG + chr3.2:79561293-79561312 None:intergenic 45.0%
CTTCTGATTACCAAGTCGGT+AGG + chr3.2:79560220-79560239 None:intergenic 45.0%
GACAAAGACCATGGGGAAAA+TGG - chr3.2:79560787-79560806 MS.gene06464:intron 45.0%
GTCGAATGCTGAGAAGAGTT+AGG + chr3.2:79561074-79561093 None:intergenic 45.0%
TAGTAGTAGTAGCTGGTGGA+GGG + chr3.2:79560968-79560987 None:intergenic 45.0%
TGAGTAGTAGTAGTAGCTGG+TGG + chr3.2:79560972-79560991 None:intergenic 45.0%
TGGAACGTTTCGAATTCACC+GGG - chr3.2:79560993-79561012 MS.gene06464:intron 45.0%
TTTCTACTCAGTTGCCACCT+TGG - chr3.2:79561273-79561292 MS.gene06464:CDS 45.0%
! ATATCAGCGTCACTTTGGGT+TGG + chr3.2:79559918-79559937 None:intergenic 45.0%
! GAAGCTGCTCTTCGTTTTAG+AGG - chr3.2:79560897-79560916 MS.gene06464:intron 45.0%
! TTTCGGGTATTCCTTCTGCA+AGG - chr3.2:79561117-79561136 MS.gene06464:CDS 45.0%
!! ACTTGTTGTTGGCAAAGCAG+GGG + chr3.2:79560135-79560154 None:intergenic 45.0%
ATGCCCCTCAAGGTTGTACA+TGG + chr3.2:79560352-79560371 None:intergenic 50.0%
GAGGAGTGAGACAAAGACCA+TGG - chr3.2:79560778-79560797 MS.gene06464:intron 50.0%
GGAGTGAGACAAAGACCATG+GGG - chr3.2:79560780-79560799 MS.gene06464:intron 50.0%
GGCGATTTCAAATTCCTCGG+TGG - chr3.2:79560104-79560123 MS.gene06464:CDS 50.0%
GTAGTAGTAGTAGCTGGTGG+AGG + chr3.2:79560969-79560988 None:intergenic 50.0%
GTTGCCACCTTGGTCAACTT+CGG - chr3.2:79561283-79561302 MS.gene06464:CDS 50.0%
TGATCCGAAGTTGACCAAGG+TGG + chr3.2:79561290-79561309 None:intergenic 50.0%
!! TTAGCCTTACCCTACCGACT+TGG - chr3.2:79560207-79560226 MS.gene06464:CDS 50.0%
TGTTGTTGGCAAAGCAGGGG+AGG + chr3.2:79560132-79560151 None:intergenic 55.0%
! TCTGCTGCCCATTTTCCCCA+TGG + chr3.2:79560798-79560817 None:intergenic 55.0%
AAGCAGGGGAGGAACCACCG+AGG + chr3.2:79560121-79560140 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr3.2 gene 79559867 79561331 79559867 ID=MS.gene06464
chr3.2 mRNA 79559867 79561331 79559867 ID=MS.gene06464.t1;Parent=MS.gene06464
chr3.2 exon 79561046 79561331 79561046 ID=MS.gene06464.t1.exon1;Parent=MS.gene06464.t1
chr3.2 CDS 79561046 79561331 79561046 ID=cds.MS.gene06464.t1;Parent=MS.gene06464.t1
chr3.2 exon 79560041 79560543 79560041 ID=MS.gene06464.t1.exon2;Parent=MS.gene06464.t1
chr3.2 CDS 79560041 79560543 79560041 ID=cds.MS.gene06464.t1;Parent=MS.gene06464.t1
chr3.2 exon 79559867 79559950 79559867 ID=MS.gene06464.t1.exon3;Parent=MS.gene06464.t1
chr3.2 CDS 79559867 79559950 79559867 ID=cds.MS.gene06464.t1;Parent=MS.gene06464.t1
Gene Sequence

>MS.gene06464

ATGTCTGCAATGATCTCAGCTTTGACTCATATCGTTTCTGGAGATGTTCCAACCCAAAGTGACGCTGATATAGTTCATCATAATAGTGCAATTCAAGGAACGGTTTCTTTTACACCAAACATCACCAACAATATGTCTTCTCCTTCTACAACACAATCTTTGTCTTCTCCTTCTTCTTCATCTAATTATGCTACTAGTTCTTCTCTCAAGAGAACTAGGGAAGATGATAGATTTGTTGGCGATTTCAAATTCCTCGGTGGTTCCTCCCCTGCTTTGCCAACAACAAGTAAGCACACCAAATTAAATATTTCTCTTCTTTCTTCAATTTATTTTTTTTGTCTTAGCCTTACCCTACCGACTTGGTAATCAGAAGTTCGGTTAGATAATAAATAAATTGAAGTATAGACTTGATAATCCAAAGTTCGGTTAAAAAATAAATAAATTGAAGTCAGATCGGATGGTTCTACTAGTCATGATTCAAACCATGTACAACCTTGAGGGGCATATATATGTAAAAACCACCAATTTTATGTATTTTCTTTAATTTGTTGTTTGTAACATAAAACATTAGAACATAACAATTCTCAACAAATAAAACATTTTTATTTGAAGTAATAATGTAAGTATAACTTAGGCGTGTTCAATGTAATTATATTCAACTAATTCATTTTCTTAAATTATTCGTCCAACATATTTTTGTCTTTACTTCATATATATGGTTTGTATATTTAAGGTTATGTATGTCTTCCATTAAATACAAAGCTTATTATTTTGATATAATAATGCAGTTGCAGAAAGTTCAAGCATGAATAGGACAGCAACAAGAATAACAAGAGAAATGGGAAATGCAGTGTATGAATATAGAAGAACAGAGAATGTAGTAAGAGAAGGAGAAGCAAAGAGAAAATACAGAGGAGTGAGACAAAGACCATGGGGAAAATGGGCAGCAGAGATAAGAGATCCATTCAAAGCAGCAAGAGTATGGTTAGGAACCTTTGAAACTGCTGAAGCAGCTGCTAGAGCATACGATGAAGCTGCTCTTCGTTTTAGAGGCAACAAAGCCAAACTCAATTTCCCTGAAAATGTTACACTTCGTAACCCTCCACCAGCTACTACTACTACTCAATGGAACGTTTCGAATTCACCGGGTTCAATTGTTTCTATTACAACTTCTACTGATCCTGTTGTTCATACTAGACCTTTTCCTAACTCTTCTCAGCATTCGACAAACTTTTATGATCGTTTTCAGTTTTCGGGTATTCCTTCTGCAAGGAATGTTTATGATGATAATGTGATTATGGCTTCTCATCTACAATCATCATCATCGTCGCCAGCTTCTTCTTTGTCATCATCTTCTTCTGCATTTGTTTCTTCTATGCAGGGCAATACTCCAGTTTCCTCGTACTTTTCTACTCAGTTGCCACCTTGGTCAACTTCGGATCATAGCTCTTCTCCGTCTAGATGA
Protein sequence

>MS.gene06464.t1

MSAMISALTHIVSGDVPTQSDADIVHHNSAIQGTVSFTPNITNNMSSPSTTQSLSSPSSSSNYATSSSLKRTREDDRFVGDFKFLGGSSPALPTTIAESSSMNRTATRITREMGNAVYEYRRTENVVREGEAKRKYRGVRQRPWGKWAAEIRDPFKAARVWLGTFETAEAAARAYDEAALRFRGNKAKLNFPENVTLRNPPPATTTTQWNVSNSPGSIVSITTSTDPVVHTRPFPNSSQHSTNFYDRFQFSGIPSARNVYDDNGNTPVSSYFSTQLPPWSTSDHSSSPSR