Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049423.t1 | XP_013461478.2 | 89.9 | 328 | 33 | 0 | 1 | 328 | 26 | 353 | 4.30E-166 | 594 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049423.t1 | Q5M7Z0 | 29.6 | 314 | 209 | 8 | 20 | 326 | 125 | 433 | 1.2e-28 | 128.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049423.t1 | A0A396IZB5 | 89.9 | 328 | 33 | 0 | 1 | 328 | 26 | 353 | 3.1e-166 | 594.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049423 | MS.gene06554 | 0.839966 | 1.15E-57 | -1.69E-46 |
| MS.gene049423 | MS.gene43440 | 0.813119 | 3.01E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049423.t1 | MTR_3g093660 | 88.506 | 261 | 30 | 0 | 1 | 261 | 26 | 286 | 5.35e-161 | 451 |
| MS.gene049423.t1 | MTR_5g068460 | 69.333 | 300 | 91 | 1 | 28 | 327 | 182 | 480 | 4.21e-153 | 438 |
| MS.gene049423.t1 | MTR_7g074140 | 62.583 | 302 | 113 | 0 | 26 | 327 | 124 | 425 | 8.62e-134 | 387 |
| MS.gene049423.t1 | MTR_5g007710 | 48.214 | 56 | 29 | 0 | 255 | 310 | 280 | 335 | 5.43e-12 | 66.6 |
| MS.gene049423.t1 | MTR_5g007710 | 48.214 | 56 | 29 | 0 | 255 | 310 | 280 | 335 | 8.20e-12 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049423.t1 | AT5G01960 | 62.136 | 309 | 117 | 0 | 18 | 326 | 116 | 424 | 3.16e-145 | 416 |
| MS.gene049423.t1 | AT1G65040 | 44.828 | 58 | 32 | 0 | 255 | 312 | 280 | 337 | 5.02e-11 | 63.9 |
| MS.gene049423.t1 | AT1G65040 | 44.828 | 58 | 32 | 0 | 255 | 312 | 257 | 314 | 5.08e-11 | 63.9 |
| MS.gene049423.t1 | AT1G65040 | 45.614 | 57 | 31 | 0 | 255 | 311 | 209 | 265 | 6.05e-11 | 63.5 |
| MS.gene049423.t1 | AT1G65040 | 45.614 | 57 | 31 | 0 | 255 | 311 | 127 | 183 | 6.09e-11 | 62.4 |
| MS.gene049423.t1 | AT1G65040 | 44.262 | 61 | 34 | 0 | 255 | 315 | 101 | 161 | 7.43e-11 | 62.4 |
| MS.gene049423.t1 | AT1G65040 | 44.828 | 58 | 32 | 0 | 255 | 312 | 139 | 196 | 8.00e-11 | 62.8 |
Find 55 sgRNAs with CRISPR-Local
Find 376 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAGAAGACGAAATTCTTTA+TGG | 0.134162 | 3.1:-74946290 | MS.gene049423:CDS |
| GAACGCAATATTCATCATTT+TGG | 0.200530 | 3.1:-74947745 | MS.gene049423:CDS |
| CCAAAAGACGGTGTTGCTTT+TGG | 0.243109 | 3.1:+74947768 | None:intergenic |
| ATCAACAACAAGAGCGAAAA+AGG | 0.256421 | 3.1:+74949157 | None:intergenic |
| CCAAAAGCAACACCGTCTTT+TGG | 0.299949 | 3.1:-74947768 | MS.gene049423:CDS |
| CCACCGACAACATCAGTTAA+AGG | 0.319245 | 3.1:+74949253 | None:intergenic |
| GCAGATTTCTTTGTCACAAT+TGG | 0.363731 | 3.1:-74948106 | MS.gene049423:intron |
| CTATGCATTTACGAGTGTTA+TGG | 0.387657 | 3.1:-74947828 | MS.gene049423:CDS |
| CCTGCTCATCTGCGGACCTT+TGG | 0.398301 | 3.1:-74943715 | MS.gene049423:CDS |
| GTGTATCAGCTGTAATGTTC+AGG | 0.404247 | 3.1:-74948084 | MS.gene049423:CDS |
| TAACCTGTCGACGGAAGTTA+TGG | 0.418408 | 3.1:+74946708 | None:intergenic |
| GTCCCTTTAACTGATGTTGT+CGG | 0.452080 | 3.1:-74949256 | MS.gene049423:CDS |
| CTTTCTTGCCAGCACCAGTT+TGG | 0.452560 | 3.1:-74946547 | MS.gene049423:CDS |
| AATGTACTTGCCCGGTGTGC+AGG | 0.460660 | 3.1:-74943750 | MS.gene049423:CDS |
| CTACCAATGTCCTGCACACC+GGG | 0.467233 | 3.1:+74943740 | None:intergenic |
| CACCGACAACATCAGTTAAA+GGG | 0.474359 | 3.1:+74949254 | None:intergenic |
| CCAAAGGTCCGCAGATGAGC+AGG | 0.477758 | 3.1:+74943715 | None:intergenic |
| CTCTTCTCATCAATTATCAC+AGG | 0.485206 | 3.1:-74946491 | MS.gene049423:CDS |
| AATCGGTACCAAACTGGTGC+TGG | 0.486207 | 3.1:+74946539 | None:intergenic |
| CAAGGGTCAAATCTTAACTC+TGG | 0.491542 | 3.1:-74946597 | MS.gene049423:intron |
| GAAGATGCATGTTCCTATCC+TGG | 0.496904 | 3.1:-74944574 | MS.gene049423:CDS |
| TAGGAACATGCATCTTCTCT+TGG | 0.500016 | 3.1:+74944580 | None:intergenic |
| ACGCCATAACTTCCGTCGAC+AGG | 0.500970 | 3.1:-74946711 | MS.gene049423:intron |
| TGTTTATGCTACATCAGAAC+AGG | 0.501816 | 3.1:-74946267 | MS.gene049423:intron |
| TAAATGCAGGTACGTGCTGC+TGG | 0.508684 | 3.1:-74944621 | MS.gene049423:intron |
| TGTCCACAGCGAACCAGGAT+AGG | 0.526498 | 3.1:+74944561 | None:intergenic |
| TGAGAGAGAATGTACTTGCC+CGG | 0.526955 | 3.1:-74943758 | MS.gene049423:CDS |
| CATCTGCGGACCTTTGGAGA+TGG | 0.534634 | 3.1:-74943709 | MS.gene049423:CDS |
| CTCTGTCCGCCGCAATAGCA+CGG | 0.540543 | 3.1:+74949287 | None:intergenic |
| ACATGTGTCCACAGCGAACC+AGG | 0.543274 | 3.1:+74944556 | None:intergenic |
| AATGGTGCGGCAAGTGGCAA+TGG | 0.548641 | 3.1:-74946774 | MS.gene049423:CDS |
| CAAGAAACATACTGCGCTGA+AGG | 0.554124 | 3.1:-74948047 | MS.gene049423:intron |
| TTGCCCGGTGTGCAGGACAT+TGG | 0.557576 | 3.1:-74943743 | MS.gene049423:CDS |
| GTTAACATCTGCAGTTGAGA+AGG | 0.561594 | 3.1:-74946450 | MS.gene049423:intron |
| AGATACAATGGTGCGGCAAG+TGG | 0.567277 | 3.1:-74946780 | MS.gene049423:CDS |
| CCTTTAACTGATGTTGTCGG+TGG | 0.583319 | 3.1:-74949253 | MS.gene049423:CDS |
| GAATGTGATGTTCTCTGAAG+AGG | 0.584677 | 3.1:-74949314 | None:intergenic |
| AATATTGCGTTCCCAAAAGA+CGG | 0.586850 | 3.1:+74947756 | None:intergenic |
| TCATTGGCTTTCAGATACAA+TGG | 0.588648 | 3.1:-74946792 | MS.gene049423:intron |
| GCGAGGAGTGTGTATCTGAA+TGG | 0.594730 | 3.1:-74944530 | MS.gene049423:intron |
| ACATCAGTTAAAGGGACTAA+CGG | 0.601383 | 3.1:+74949262 | None:intergenic |
| AGAGGCTCACCGTGCTATTG+CGG | 0.605547 | 3.1:-74949296 | MS.gene049423:CDS |
| AAAAGAGAGAGCAAGAAGAG+CGG | 0.612995 | 3.1:+74947869 | None:intergenic |
| GGCTCACCGTGCTATTGCGG+CGG | 0.614817 | 3.1:-74949293 | MS.gene049423:CDS |
| ACTACCAATGTCCTGCACAC+CGG | 0.615463 | 3.1:+74943739 | None:intergenic |
| AACTACTCCTAACCTGTCGA+CGG | 0.623342 | 3.1:+74946699 | None:intergenic |
| AAATCATACATTCCATGTGA+CGG | 0.624468 | 3.1:+74949122 | None:intergenic |
| GTTCCTATCCTGGTTCGCTG+TGG | 0.632151 | 3.1:-74944564 | MS.gene049423:CDS |
| TTGGCGGAAACATGGCCAGA+GGG | 0.641387 | 3.1:+74947787 | None:intergenic |
| ACTTGTTGATCCATCTCCAA+AGG | 0.643362 | 3.1:+74943699 | None:intergenic |
| GGCTTTCAGATACAATGGTG+CGG | 0.644614 | 3.1:-74946787 | MS.gene049423:intron |
| TGGTAGTACCTGCTCATCTG+CGG | 0.645210 | 3.1:-74943723 | MS.gene049423:CDS |
| AATCTGCTGAAAATCAAACC+AGG | 0.658542 | 3.1:+74949204 | None:intergenic |
| TTTGGCGGAAACATGGCCAG+AGG | 0.658754 | 3.1:+74947786 | None:intergenic |
| CTGTGGACACATGTTCTGCG+AGG | 0.696401 | 3.1:-74944547 | MS.gene049423:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATTGTAATAAGTTTATT+TGG | + | chr3.1:74945776-74945795 | None:intergenic | 10.0% |
| !! | ATATACTAATATTTGTATAA+TGG | - | chr3.1:74948293-74948312 | MS.gene049423:intron | 10.0% |
| !! | TTATTCTATAATATAAAAGA+AGG | + | chr3.1:74949144-74949163 | None:intergenic | 10.0% |
| !!! | TCATTTTCTTTTTTTTTTTA+AGG | + | chr3.1:74947220-74947239 | None:intergenic | 10.0% |
| !! | AAAGGAATTATATACTTAAA+TGG | - | chr3.1:74946966-74946985 | MS.gene049423:intron | 15.0% |
| !! | CTATAAAAGTTATTGAAAAT+TGG | - | chr3.1:74946871-74946890 | MS.gene049423:intron | 15.0% |
| !! | TAAACAAAGTTATTCAAATT+TGG | + | chr3.1:74945495-74945514 | None:intergenic | 15.0% |
| !! | TCTAAAAATGTGTTTATAAA+TGG | + | chr3.1:74947886-74947905 | None:intergenic | 15.0% |
| !! | TTTCAAAATGAAAATTCTAA+AGG | + | chr3.1:74944988-74945007 | None:intergenic | 15.0% |
| !!! | AAAGAAAATGGAATAATTTT+GGG | + | chr3.1:74946621-74946640 | None:intergenic | 15.0% |
| !!! | AAATGTTTTAAATTGTTTCA+AGG | - | chr3.1:74946370-74946389 | MS.gene049423:intron | 15.0% |
| !!! | AAATTTGAATAACTTTGTTT+AGG | - | chr3.1:74945494-74945513 | MS.gene049423:intron | 15.0% |
| !!! | AATGTTTTAAATTGTTTCAA+GGG | - | chr3.1:74946371-74946390 | MS.gene049423:intron | 15.0% |
| !!! | AATTTGAATAACTTTGTTTA+GGG | - | chr3.1:74945495-74945514 | MS.gene049423:intron | 15.0% |
| !!! | ATTTAAGACAAATAAACTAT+AGG | - | chr3.1:74948533-74948552 | MS.gene049423:intron | 15.0% |
| !!! | TAAAGAAAATGGAATAATTT+TGG | + | chr3.1:74946622-74946641 | None:intergenic | 15.0% |
| !! | AAAAATGATCTGATTAAATC+TGG | - | chr3.1:74946752-74946771 | MS.gene049423:CDS | 20.0% |
| !! | AAAAATGTGTTTATAAATGG+TGG | + | chr3.1:74947883-74947902 | None:intergenic | 20.0% |
| !! | AAAATGTGTTTATAAATGGT+GGG | + | chr3.1:74947882-74947901 | None:intergenic | 20.0% |
| !! | AAATTGTGGAATATATCAAT+TGG | - | chr3.1:74945652-74945671 | MS.gene049423:intron | 20.0% |
| !! | AATGTAATGTAATGTAATGT+AGG | - | chr3.1:74943952-74943971 | MS.gene049423:intron | 20.0% |
| !! | AGAAGTAACAGATAATTATT+TGG | - | chr3.1:74948561-74948580 | MS.gene049423:intron | 20.0% |
| !! | ATAAATTCAGAAGATGAAAA+TGG | - | chr3.1:74948728-74948747 | MS.gene049423:intron | 20.0% |
| !! | ATAACCAATTTAATACAGAT+AGG | + | chr3.1:74948980-74948999 | None:intergenic | 20.0% |
| !! | ATAAGGTAATAAAAACAACA+TGG | - | chr3.1:74944570-74944589 | MS.gene049423:CDS | 20.0% |
| !! | ATATCATACAGTTAAATTGA+TGG | + | chr3.1:74944843-74944862 | None:intergenic | 20.0% |
| !! | GAAGTAACAGATAATTATTT+GGG | - | chr3.1:74948562-74948581 | MS.gene049423:intron | 20.0% |
| !! | GTAAACCTAAAATAATTATG+TGG | + | chr3.1:74948651-74948670 | None:intergenic | 20.0% |
| !! | TAACCAATTTAATACAGATA+GGG | + | chr3.1:74948979-74948998 | None:intergenic | 20.0% |
| !! | TAATCTACATATACAAACAA+GGG | + | chr3.1:74947445-74947464 | None:intergenic | 20.0% |
| !! | TAATGTATCAATTATGGAAA+TGG | - | chr3.1:74949006-74949025 | MS.gene049423:intron | 20.0% |
| !! | TAGGATAATCTTTAATCATA+TGG | - | chr3.1:74943971-74943990 | MS.gene049423:intron | 20.0% |
| !! | TATCTGTATTAAATTGGTTA+TGG | - | chr3.1:74948979-74948998 | MS.gene049423:intron | 20.0% |
| !! | TCATTTATGCAATCAAATAA+AGG | - | chr3.1:74946948-74946967 | MS.gene049423:intron | 20.0% |
| !! | TGATATTATCACATAAATTG+TGG | - | chr3.1:74945638-74945657 | MS.gene049423:intron | 20.0% |
| !! | TTAAAGACTAAAGTATATCA+AGG | - | chr3.1:74945415-74945434 | MS.gene049423:intron | 20.0% |
| !! | TTAATCTACATATACAAACA+AGG | + | chr3.1:74947446-74947465 | None:intergenic | 20.0% |
| !!! | AAAAGCATACATAAAGAAAT+CGG | + | chr3.1:74948859-74948878 | None:intergenic | 20.0% |
| !!! | AAGCTTTCATTCTTTAAAAT+TGG | - | chr3.1:74946559-74946578 | MS.gene049423:CDS | 20.0% |
| !!! | AATTTTAGAGGTTTAAGATA+AGG | - | chr3.1:74946901-74946920 | MS.gene049423:intron | 20.0% |
| !!! | ATAATAGAACAGCATTTTTA+TGG | - | chr3.1:74947170-74947189 | MS.gene049423:intron | 20.0% |
| !!! | ATATTCATCATTTTGGTTAA+TGG | - | chr3.1:74945247-74945266 | MS.gene049423:intron | 20.0% |
| !!! | ATGTTTCTTTTAGAATTTTC+AGG | - | chr3.1:74945706-74945725 | MS.gene049423:intron | 20.0% |
| !!! | ATTTCTTTATGTATGCTTTT+CGG | - | chr3.1:74948859-74948878 | MS.gene049423:intron | 20.0% |
| !!! | ATTTTAGAGGTTTAAGATAA+GGG | - | chr3.1:74946902-74946921 | MS.gene049423:intron | 20.0% |
| !!! | CAATTATTCTAATTCTTTTG+TGG | - | chr3.1:74946131-74946150 | MS.gene049423:intron | 20.0% |
| !!! | GTTTTTGTATACTTTTTTTG+TGG | - | chr3.1:74947320-74947339 | MS.gene049423:intron | 20.0% |
| !!! | TGTTTCTTTTAGAATTTTCA+GGG | - | chr3.1:74945707-74945726 | MS.gene049423:intron | 20.0% |
| !!! | TTGTTTTTATTACCTTATCA+AGG | + | chr3.1:74944568-74944587 | None:intergenic | 20.0% |
| !!! | TTTTATGTTCAGAACAAAAA+TGG | + | chr3.1:74944724-74944743 | None:intergenic | 20.0% |
| ! | AAACTATACTTGAAAACTAC+AGG | + | chr3.1:74946332-74946351 | None:intergenic | 25.0% |
| ! | AAAGTTTCAAATGCTTATCA+AGG | - | chr3.1:74947281-74947300 | MS.gene049423:intron | 25.0% |
| ! | AAATGTTAAGAGTTTCACAA+TGG | + | chr3.1:74947920-74947939 | None:intergenic | 25.0% |
| ! | AACCAATTTAATACAGATAG+GGG | + | chr3.1:74948978-74948997 | None:intergenic | 25.0% |
| ! | AAGTTTCAAATGCTTATCAA+GGG | - | chr3.1:74947282-74947301 | MS.gene049423:intron | 25.0% |
| ! | ACAATTCTGATAATCAATTG+AGG | + | chr3.1:74948625-74948644 | None:intergenic | 25.0% |
| ! | AGATTAACAAAGTATGTTGT+GGG | + | chr3.1:74947011-74947030 | None:intergenic | 25.0% |
| ! | AGCAGCATTAAATAACAAAA+GGG | + | chr3.1:74948266-74948285 | None:intergenic | 25.0% |
| ! | AGTCCATGTAAAAGAAAAAT+CGG | + | chr3.1:74946466-74946485 | None:intergenic | 25.0% |
| ! | AGTTAGTGTGTTATGTTAAT+AGG | - | chr3.1:74944758-74944777 | MS.gene049423:intron | 25.0% |
| ! | ATAAATGAAGATTTGAAGGA+GGG | + | chr3.1:74946936-74946955 | None:intergenic | 25.0% |
| ! | ATAATCAATTGAGGCAATTT+AGG | + | chr3.1:74948616-74948635 | None:intergenic | 25.0% |
| ! | ATCAATTAAAATGAGAAGTG+CGG | + | chr3.1:74945622-74945641 | None:intergenic | 25.0% |
| ! | CAAGTAAAAACTATGAAGAT+TGG | + | chr3.1:74947375-74947394 | None:intergenic | 25.0% |
| ! | GACAATTTATTTGCTTTATC+AGG | - | chr3.1:74945323-74945342 | MS.gene049423:intron | 25.0% |
| ! | GATAAAGCAAATAAATTGTC+TGG | + | chr3.1:74945323-74945342 | None:intergenic | 25.0% |
| ! | GCATGAAAAATACTTCAAAT+TGG | + | chr3.1:74945848-74945867 | None:intergenic | 25.0% |
| ! | GGAAGATAATGTATCAATTA+TGG | - | chr3.1:74949000-74949019 | MS.gene049423:intron | 25.0% |
| ! | GGATAATGTATACTTTCATA+AGG | - | chr3.1:74948156-74948175 | MS.gene049423:intron | 25.0% |
| ! | GGATTCTTTATATGATTATG+TGG | - | chr3.1:74948177-74948196 | MS.gene049423:intron | 25.0% |
| ! | GTTAGTGTGTTATGTTAATA+GGG | - | chr3.1:74944759-74944778 | MS.gene049423:intron | 25.0% |
| ! | TAAATTAATGCAACAGTCTT+CGG | - | chr3.1:74947046-74947065 | MS.gene049423:intron | 25.0% |
| ! | TAACAGATAATTATTTGGGT+TGG | - | chr3.1:74948566-74948585 | MS.gene049423:intron | 25.0% |
| ! | TAAGGATCATTACAAAAACA+CGG | + | chr3.1:74944288-74944307 | None:intergenic | 25.0% |
| ! | TAATCAATTGAGGCAATTTA+GGG | + | chr3.1:74948615-74948634 | None:intergenic | 25.0% |
| ! | TAGCAGCATTAAATAACAAA+AGG | + | chr3.1:74948267-74948286 | None:intergenic | 25.0% |
| ! | TCACCTAATAAACATATAGA+CGG | + | chr3.1:74946646-74946665 | None:intergenic | 25.0% |
| ! | TTAGTGTGTTATGTTAATAG+GGG | - | chr3.1:74944760-74944779 | MS.gene049423:intron | 25.0% |
| ! | TTGCATAAATGAAGATTTGA+AGG | + | chr3.1:74946940-74946959 | None:intergenic | 25.0% |
| !! | AATTTGTTTAGTTGTATGCT+TGG | - | chr3.1:74947135-74947154 | MS.gene049423:intron | 25.0% |
| !! | AGTCTTTTGTATTTAATCAG+TGG | - | chr3.1:74945462-74945481 | MS.gene049423:intron | 25.0% |
| !! | ATACAGTTAAATTGATGGAT+TGG | + | chr3.1:74944838-74944857 | None:intergenic | 25.0% |
| !! | ATTGGATATGCAAATTTTAG+AGG | - | chr3.1:74946889-74946908 | MS.gene049423:intron | 25.0% |
| !! | GTCTTTTGTATTTAATCAGT+GGG | - | chr3.1:74945463-74945482 | MS.gene049423:intron | 25.0% |
| !! | GTTGTCCACATAATTATTTT+AGG | - | chr3.1:74948643-74948662 | MS.gene049423:intron | 25.0% |
| !! | TCTTCATAGTTTTTACTTGT+TGG | - | chr3.1:74947376-74947395 | MS.gene049423:intron | 25.0% |
| !! | TTTTATTACCTTATCAAGGA+GGG | + | chr3.1:74944564-74944583 | None:intergenic | 25.0% |
| !! | TTTTTATTACCTTATCAAGG+AGG | + | chr3.1:74944565-74944584 | None:intergenic | 25.0% |
| !! | TTTTTCTTTTACATGGACTT+TGG | - | chr3.1:74946467-74946486 | MS.gene049423:CDS | 25.0% |
| !!! | AAGTTTTGATCCAAAATTTG+CGG | - | chr3.1:74945807-74945826 | MS.gene049423:intron | 25.0% |
| !!! | ATGCCAAATTTTAAGTGTAA+CGG | + | chr3.1:74948678-74948697 | None:intergenic | 25.0% |
| !!! | TTATAGAGGTTTTAGAAGTA+AGG | - | chr3.1:74947533-74947552 | MS.gene049423:intron | 25.0% |
| !!! | TTTTTCTCTAGTCTTTTTAC+CGG | - | chr3.1:74948322-74948341 | MS.gene049423:intron | 25.0% |
| AAAACTGCTTAAATGCAAAC+AGG | + | chr3.1:74945913-74945932 | None:intergenic | 30.0% | |
| AAAATCAAACCAGGAAAAAG+TGG | + | chr3.1:74943775-74943794 | None:intergenic | 30.0% | |
| AAACTTCAAAACTGAGTCTA+TGG | - | chr3.1:74949098-74949117 | MS.gene049423:intron | 30.0% | |
| AAATCATACATTCCATGTGA+CGG | + | chr3.1:74943866-74943885 | None:intergenic | 30.0% | |
| AAATGTGGCTAATAATTGTG+TGG | - | chr3.1:74948912-74948931 | MS.gene049423:intron | 30.0% | |
| AAGCTTTCAGAAAAAAGATG+AGG | + | chr3.1:74947258-74947277 | None:intergenic | 30.0% | |
| AATCAATTGAGGCAATTTAG+GGG | + | chr3.1:74948614-74948633 | None:intergenic | 30.0% | |
| ACACACATAAATAATACACC+AGG | + | chr3.1:74946077-74946096 | None:intergenic | 30.0% | |
| ACCAATTTAATACAGATAGG+GGG | + | chr3.1:74948977-74948996 | None:intergenic | 30.0% | |
| ACTAAAGTATATCAAGGATG+TGG | - | chr3.1:74945421-74945440 | MS.gene049423:intron | 30.0% | |
| AGCATTAAATAACAAAAGGG+AGG | + | chr3.1:74948263-74948282 | None:intergenic | 30.0% | |
| AGCTTAGAGATTATCAAGTA+AGG | + | chr3.1:74944306-74944325 | None:intergenic | 30.0% | |
| ATATAGACGGGTAAAGAAAA+TGG | + | chr3.1:74946633-74946652 | None:intergenic | 30.0% | |
| CAAGTCTAATAAATAGTCTG+AGG | + | chr3.1:74948815-74948834 | None:intergenic | 30.0% | |
| CACCTAATAAACATATAGAC+GGG | + | chr3.1:74946645-74946664 | None:intergenic | 30.0% | |
| CAGATTAACAAAGTATGTTG+TGG | + | chr3.1:74947012-74947031 | None:intergenic | 30.0% | |
| CATAAATGAAGATTTGAAGG+AGG | + | chr3.1:74946937-74946956 | None:intergenic | 30.0% | |
| GACACAATTAAATGCAAACA+AGG | + | chr3.1:74947580-74947599 | None:intergenic | 30.0% | |
| GATGACGAAAAAAATTAGAG+AGG | - | chr3.1:74945053-74945072 | MS.gene049423:intron | 30.0% | |
| GTATTACTGTTTGTAAACAG+TGG | - | chr3.1:74947952-74947971 | MS.gene049423:intron | 30.0% | |
| GTTAGATAACCAACCAATAA+TGG | + | chr3.1:74945600-74945619 | None:intergenic | 30.0% | |
| TAAAGGACTTGCATAGTTAT+GGG | + | chr3.1:74944971-74944990 | None:intergenic | 30.0% | |
| TAAATGCAAACAGGCAAATT+TGG | + | chr3.1:74945904-74945923 | None:intergenic | 30.0% | |
| TACCCGTCTATATGTTTATT+AGG | - | chr3.1:74946640-74946659 | MS.gene049423:intron | 30.0% | |
| TATGTTCAGAACAAAAATGG+TGG | + | chr3.1:74944721-74944740 | None:intergenic | 30.0% | |
| TCAGAAGACGAAATTCTTTA+TGG | - | chr3.1:74946695-74946714 | MS.gene049423:intron | 30.0% | |
| TCGGTTATAGTAAAAAGATG+TGG | - | chr3.1:74947065-74947084 | MS.gene049423:intron | 30.0% | |
| TCTCCGTTACACTTAAAATT+TGG | - | chr3.1:74948672-74948691 | MS.gene049423:intron | 30.0% | |
| TGCAAATGTTTATAAGTGGT+GGG | + | chr3.1:74947667-74947686 | None:intergenic | 30.0% | |
| TTATTTGCGTAGTGATTCTA+TGG | - | chr3.1:74944622-74944641 | MS.gene049423:intron | 30.0% | |
| TTTCCTCTAAGTTTCTACTT+CGG | - | chr3.1:74944689-74944708 | MS.gene049423:intron | 30.0% | |
| ! | AAGTGTTGCATTGTTAAATG+TGG | - | chr3.1:74948897-74948916 | MS.gene049423:intron | 30.0% |
| ! | AATTCGATTTCTGTTTTGCA+GGG | - | chr3.1:74945079-74945098 | MS.gene049423:intron | 30.0% |
| ! | ATATTTGCTAGATATTGCAG+TGG | - | chr3.1:74948698-74948717 | MS.gene049423:intron | 30.0% |
| ! | CTTTCATTTTCTTAAGTGCT+TGG | - | chr3.1:74948135-74948154 | MS.gene049423:intron | 30.0% |
| ! | GAACGCAATATTCATCATTT+TGG | - | chr3.1:74945240-74945259 | MS.gene049423:intron | 30.0% |
| ! | TAAGTTGAGTATCTAAATGC+AGG | - | chr3.1:74948351-74948370 | MS.gene049423:intron | 30.0% |
| ! | TAGAACAGCATTTTTATGGA+TGG | - | chr3.1:74947174-74947193 | MS.gene049423:intron | 30.0% |
| ! | TTCTTTTGTCCTTCAAATGT+TGG | - | chr3.1:74943903-74943922 | MS.gene049423:intron | 30.0% |
| ! | TTTTTCGTCATCTTTTTGTG+AGG | + | chr3.1:74945045-74945064 | None:intergenic | 30.0% |
| !! | AAATCACATTTCTGGTCATT+AGG | + | chr3.1:74949074-74949093 | None:intergenic | 30.0% |
| !! | ACAAGTCGATTTTGTAAGAA+TGG | + | chr3.1:74947846-74947865 | None:intergenic | 30.0% |
| !! | AGTTTTGATCCAAAATTTGC+GGG | - | chr3.1:74945808-74945827 | MS.gene049423:intron | 30.0% |
| !! | CAAGTCGATTTTGTAAGAAT+GGG | + | chr3.1:74947845-74947864 | None:intergenic | 30.0% |
| !! | GTCTTCTGATAATGCTTTTA+AGG | + | chr3.1:74946684-74946703 | None:intergenic | 30.0% |
| !! | TTGCTGATTTACTGCAAAAA+TGG | - | chr3.1:74946248-74946267 | MS.gene049423:intron | 30.0% |
| !! | TTGCTTTTACATTGCTTTGT+TGG | - | chr3.1:74948068-74948087 | MS.gene049423:CDS | 30.0% |
| !! | TTTTGTGGATGCTACTTATT+TGG | - | chr3.1:74947335-74947354 | MS.gene049423:intron | 30.0% |
| !!! | ATAGACTCAGTTTTGAAGTT+TGG | + | chr3.1:74949099-74949118 | None:intergenic | 30.0% |
| !!! | CATCATTTTGGTTAATGGTA+TGG | - | chr3.1:74945252-74945271 | MS.gene049423:intron | 30.0% |
| !!! | CTTTTATTTTCTCAAGTGCT+TGG | - | chr3.1:74948102-74948121 | MS.gene049423:CDS | 30.0% |
| !!! | GTACCGATTTTTCTTTTACA+TGG | - | chr3.1:74946460-74946479 | MS.gene049423:CDS | 30.0% |
| !!! | TAGACTCAGTTTTGAAGTTT+GGG | + | chr3.1:74949098-74949117 | None:intergenic | 30.0% |
| AAAACCTCTATAAGCTGACT+CGG | + | chr3.1:74947526-74947545 | None:intergenic | 35.0% | |
| AAATAATACACCAGGACACT+GGG | + | chr3.1:74946069-74946088 | None:intergenic | 35.0% | |
| AAGAAAAATCGGTACCAAAC+TGG | + | chr3.1:74946455-74946474 | None:intergenic | 35.0% | |
| AAGTATATCAAGGATGTGGA+AGG | - | chr3.1:74945425-74945444 | MS.gene049423:intron | 35.0% | |
| AATATTGCGTTCCCAAAAGA+CGG | + | chr3.1:74945232-74945251 | None:intergenic | 35.0% | |
| AATCTGCTGAAAATCAAACC+AGG | + | chr3.1:74943784-74943803 | None:intergenic | 35.0% | |
| AATTCAAGCCCTTACAAAAC+CGG | - | chr3.1:74947621-74947640 | MS.gene049423:intron | 35.0% | |
| ACATCAGTTAAAGGGACTAA+CGG | + | chr3.1:74943726-74943745 | None:intergenic | 35.0% | |
| ATAAATAGCACTCTCTGCTT+TGG | - | chr3.1:74949047-74949066 | MS.gene049423:intron | 35.0% | |
| ATAGGGTTTGAGTGATAAAG+AGG | + | chr3.1:74944800-74944819 | None:intergenic | 35.0% | |
| ATATGATTATGTGGAAGAGC+TGG | - | chr3.1:74948186-74948205 | MS.gene049423:intron | 35.0% | |
| ATCAACAACAAGAGCGAAAA+AGG | + | chr3.1:74943831-74943850 | None:intergenic | 35.0% | |
| CAATCCAATCCAACATTTGA+AGG | + | chr3.1:74943915-74943934 | None:intergenic | 35.0% | |
| CACCACTTATAAACATTTGC+AGG | - | chr3.1:74947666-74947685 | MS.gene049423:intron | 35.0% | |
| CATGATGACACAATGCATTA+TGG | + | chr3.1:74947109-74947128 | None:intergenic | 35.0% | |
| CTAAAGGACTTGCATAGTTA+TGG | + | chr3.1:74944972-74944991 | None:intergenic | 35.0% | |
| CTATGCATTTACGAGTGTTA+TGG | - | chr3.1:74945157-74945176 | MS.gene049423:intron | 35.0% | |
| CTCTTCTCATCAATTATCAC+AGG | - | chr3.1:74946494-74946513 | MS.gene049423:CDS | 35.0% | |
| CTGCAAATGTTTATAAGTGG+TGG | + | chr3.1:74947668-74947687 | None:intergenic | 35.0% | |
| GACCTGCAAATGTTTATAAG+TGG | + | chr3.1:74947671-74947690 | None:intergenic | 35.0% | |
| GCAGATTTCTTTGTCACAAT+TGG | - | chr3.1:74944879-74944898 | MS.gene049423:intron | 35.0% | |
| GTAGTGATTCTATGGTCTAA+GGG | - | chr3.1:74944630-74944649 | MS.gene049423:intron | 35.0% | |
| GTGATGCCATCTTAGAATTT+GGG | - | chr3.1:74947809-74947828 | MS.gene049423:CDS | 35.0% | |
| GTGTTGTCTATTCTCGATAT+TGG | - | chr3.1:74946093-74946112 | MS.gene049423:intron | 35.0% | |
| TAAATAATACACCAGGACAC+TGG | + | chr3.1:74946070-74946089 | None:intergenic | 35.0% | |
| TCAAACCTGGGAAAACAAAT+TGG | + | chr3.1:74949210-74949229 | None:intergenic | 35.0% | |
| TCAAATAAGCCAATCCAAAC+AGG | - | chr3.1:74944245-74944264 | MS.gene049423:intron | 35.0% | |
| TCCATGGTCACAATATTCAT+TGG | - | chr3.1:74946177-74946196 | MS.gene049423:intron | 35.0% | |
| TGCCCAATATCTCAAAGTAA+CGG | + | chr3.1:74944030-74944049 | None:intergenic | 35.0% | |
| TGTGAGCAACAAAATGAAGT+TGG | + | chr3.1:74944002-74944021 | None:intergenic | 35.0% | |
| TGTGATGCCATCTTAGAATT+TGG | - | chr3.1:74947808-74947827 | MS.gene049423:CDS | 35.0% | |
| TGTTTATGCTACATCAGAAC+AGG | - | chr3.1:74946718-74946737 | MS.gene049423:CDS | 35.0% | |
| TTAACAGTTCTTTGCCAATG+CGG | - | chr3.1:74945523-74945542 | MS.gene049423:intron | 35.0% | |
| TTGTCCTTCAAATGTTGGAT+TGG | - | chr3.1:74943908-74943927 | MS.gene049423:intron | 35.0% | |
| TTGTGGTGAGAAACAATTAC+TGG | - | chr3.1:74946148-74946167 | MS.gene049423:intron | 35.0% | |
| ! | AGCATGAGAATAGGGTATTA+GGG | - | chr3.1:74948935-74948954 | MS.gene049423:intron | 35.0% |
| ! | AGCATTTTTATGGATGGTGT+GGG | - | chr3.1:74947180-74947199 | MS.gene049423:intron | 35.0% |
| ! | ATGCTTGAATGGTTAGTTGA+GGG | + | chr3.1:74948031-74948050 | None:intergenic | 35.0% |
| ! | CAATTACTGGTTAGTATCCA+TGG | - | chr3.1:74946161-74946180 | MS.gene049423:intron | 35.0% |
| ! | CAATTCGATTTCTGTTTTGC+AGG | - | chr3.1:74945078-74945097 | MS.gene049423:intron | 35.0% |
| ! | GGATGCTACTTATTTGGTTA+CGG | - | chr3.1:74947341-74947360 | MS.gene049423:intron | 35.0% |
| ! | GGATTCGAAGGTATAACATA+GGG | + | chr3.1:74944817-74944836 | None:intergenic | 35.0% |
| ! | TACATTGCTTTGTTGGATTG+TGG | - | chr3.1:74948075-74948094 | MS.gene049423:CDS | 35.0% |
| ! | TCAAATGTTGGATTGGATTG+TGG | - | chr3.1:74943915-74943934 | MS.gene049423:intron | 35.0% |
| ! | TCTCGATATTGGTGTTTCTA+TGG | - | chr3.1:74946104-74946123 | MS.gene049423:intron | 35.0% |
| ! | TGGATTCGAAGGTATAACAT+AGG | + | chr3.1:74944818-74944837 | None:intergenic | 35.0% |
| ! | TTTGAGATATTGGGCATGTT+TGG | - | chr3.1:74944034-74944053 | MS.gene049423:intron | 35.0% |
| ! | TTTTCAGCAGATTGCTAAGA+TGG | - | chr3.1:74943791-74943810 | MS.gene049423:intron | 35.0% |
| !! | AATTGATGGATTGGATTCGA+AGG | + | chr3.1:74944829-74944848 | None:intergenic | 35.0% |
| !! | CACCGTTACTTTGAGATATT+GGG | - | chr3.1:74944025-74944044 | MS.gene049423:intron | 35.0% |
| !! | CTTTACCAATTTGTTTTCCC+AGG | - | chr3.1:74949202-74949221 | MS.gene049423:CDS | 35.0% |
| !! | TCATTGGCTTTCAGATACAA+TGG | - | chr3.1:74946193-74946212 | MS.gene049423:intron | 35.0% |
| !! | TGATGATGTTTTATTCCCTC+TGG | - | chr3.1:74945183-74945202 | MS.gene049423:intron | 35.0% |
| !!! | AGACTCAGTTTTGAAGTTTG+GGG | + | chr3.1:74949097-74949116 | None:intergenic | 35.0% |
| !!! | AGAGGTTTTAGAAGTAAGGA+GGG | - | chr3.1:74947537-74947556 | MS.gene049423:intron | 35.0% |
| !!! | TAGAGGTTTTAGAAGTAAGG+AGG | - | chr3.1:74947536-74947555 | MS.gene049423:intron | 35.0% |
| AAAAGAGAGAGCAAGAAGAG+CGG | + | chr3.1:74945119-74945138 | None:intergenic | 40.0% | |
| AAAGTATGTTGTGGGCAAAG+AGG | + | chr3.1:74947003-74947022 | None:intergenic | 40.0% | |
| AACCATTCAAGCATCCTACT+TGG | - | chr3.1:74948037-74948056 | MS.gene049423:intron | 40.0% | |
| AATAATACACCAGGACACTG+GGG | + | chr3.1:74946068-74946087 | None:intergenic | 40.0% | |
| ACCATTCAAGCATCCTACTT+GGG | - | chr3.1:74948038-74948057 | MS.gene049423:intron | 40.0% | |
| AGGTTGAAGGAGTTCCAATT+AGG | + | chr3.1:74948008-74948027 | None:intergenic | 40.0% | |
| AGTACATTCTCTCTCAAACC+TGG | + | chr3.1:74949223-74949242 | None:intergenic | 40.0% | |
| ATCGGAAACTATCAAGAAGC+AGG | + | chr3.1:74948841-74948860 | None:intergenic | 40.0% | |
| ATTGTGTGGAGCATGAGAAT+AGG | - | chr3.1:74948926-74948945 | MS.gene049423:intron | 40.0% | |
| CAAATGCTTATCAAGGGACA+GGG | - | chr3.1:74947288-74947307 | MS.gene049423:intron | 40.0% | |
| CAAGGGTCAAATCTTAACTC+TGG | - | chr3.1:74946388-74946407 | MS.gene049423:intron | 40.0% | |
| CACCGACAACATCAGTTAAA+GGG | + | chr3.1:74943734-74943753 | None:intergenic | 40.0% | |
| CCTGACTCTTGCTTCAAATT+TGG | - | chr3.1:74947489-74947508 | MS.gene049423:intron | 40.0% | |
| CGTAGTGATTCTATGGTCTA+AGG | - | chr3.1:74944629-74944648 | MS.gene049423:intron | 40.0% | |
| CTAAACTAGCTCGCCAAAAT+TGG | + | chr3.1:74944417-74944436 | None:intergenic | 40.0% | |
| CTTCTTCACTGAGTAAAGCT+TGG | + | chr3.1:74944475-74944494 | None:intergenic | 40.0% | |
| GATACTCAACTTAGAACTGC+CGG | + | chr3.1:74948344-74948363 | None:intergenic | 40.0% | |
| GCCAATGAATATTGTGACCA+TGG | + | chr3.1:74946181-74946200 | None:intergenic | 40.0% | |
| GCCCCCTATCTGTATTAAAT+TGG | - | chr3.1:74948973-74948992 | MS.gene049423:intron | 40.0% | |
| GGTTTGAACGACTTCCTAAT+TGG | - | chr3.1:74947991-74948010 | MS.gene049423:intron | 40.0% | |
| GTACATTCTCTCTCAAACCT+GGG | + | chr3.1:74949222-74949241 | None:intergenic | 40.0% | |
| GTCCCTTTAACTGATGTTGT+CGG | - | chr3.1:74943729-74943748 | MS.gene049423:CDS | 40.0% | |
| GTGTATCAGCTGTAATGTTC+AGG | - | chr3.1:74944901-74944920 | MS.gene049423:intron | 40.0% | |
| GTTAACATCTGCAGTTGAGA+AGG | - | chr3.1:74946535-74946554 | MS.gene049423:CDS | 40.0% | |
| GTTTGGGGAAATCACATTTC+TGG | + | chr3.1:74949082-74949101 | None:intergenic | 40.0% | |
| TAACACACTTACTGACACCT+GGG | - | chr3.1:74947715-74947734 | MS.gene049423:intron | 40.0% | |
| TAACAGTTCTTTGCCAATGC+GGG | - | chr3.1:74945524-74945543 | MS.gene049423:intron | 40.0% | |
| TAGGAACATGCATCTTCTCT+TGG | + | chr3.1:74948408-74948427 | None:intergenic | 40.0% | |
| TCAAAACTGAGTCTATGGCA+TGG | - | chr3.1:74949103-74949122 | MS.gene049423:intron | 40.0% | |
| TCAAATGCTTATCAAGGGAC+AGG | - | chr3.1:74947287-74947306 | MS.gene049423:intron | 40.0% | |
| TCTAAGCTTTACTCCCACTT+GGG | - | chr3.1:74944318-74944337 | MS.gene049423:intron | 40.0% | |
| TGAGGATGCATAACAAGCAA+GGG | + | chr3.1:74948797-74948816 | None:intergenic | 40.0% | |
| TGCCATCTTAGAATTTGGGA+TGG | - | chr3.1:74947813-74947832 | MS.gene049423:CDS | 40.0% | |
| TGTGTTAAGTGTCCCACATT+GGG | + | chr3.1:74947702-74947721 | None:intergenic | 40.0% | |
| TTAACACACTTACTGACACC+TGG | - | chr3.1:74947714-74947733 | MS.gene049423:intron | 40.0% | |
| TTGTGTGGAGCATGAGAATA+GGG | - | chr3.1:74948927-74948946 | MS.gene049423:intron | 40.0% | |
| ! | AACACGGAGCATTAACATGA+TGG | + | chr3.1:74944272-74944291 | None:intergenic | 40.0% |
| ! | AATGCAAGACCCGCAAATTT+TGG | + | chr3.1:74945820-74945839 | None:intergenic | 40.0% |
| ! | ACACGGAGCATTAACATGAT+GGG | + | chr3.1:74944271-74944290 | None:intergenic | 40.0% |
| ! | ACTTGTTGATCCATCTCCAA+AGG | + | chr3.1:74949289-74949308 | None:intergenic | 40.0% |
| ! | CAAAAGCAACACCGTCTTTT+GGG | - | chr3.1:74945218-74945237 | MS.gene049423:intron | 40.0% |
| ! | CAGCATTTTTATGGATGGTG+TGG | - | chr3.1:74947179-74947198 | MS.gene049423:intron | 40.0% |
| ! | CAGGCTTTTTGTGAAAAGCA+AGG | + | chr3.1:74946313-74946332 | None:intergenic | 40.0% |
| ! | CATCTTTTTGTGAGGAGGAT+GGG | + | chr3.1:74945037-74945056 | None:intergenic | 40.0% |
| ! | CCAAATTTGAAGCAAGAGTC+AGG | + | chr3.1:74947492-74947511 | None:intergenic | 40.0% |
| ! | CTTAGCTGCTGCAATGTTTT+AGG | - | chr3.1:74945975-74945994 | MS.gene049423:intron | 40.0% |
| ! | GAGCATGAGAATAGGGTATT+AGG | - | chr3.1:74948934-74948953 | MS.gene049423:intron | 40.0% |
| ! | GATGCTTGAATGGTTAGTTG+AGG | + | chr3.1:74948032-74948051 | None:intergenic | 40.0% |
| ! | GCATTTTTATGGATGGTGTG+GGG | - | chr3.1:74947181-74947200 | MS.gene049423:intron | 40.0% |
| ! | GCCATCTTAGAATTTGGGAT+GGG | - | chr3.1:74947814-74947833 | MS.gene049423:CDS | 40.0% |
| ! | TCATCTTTTTGTGAGGAGGA+TGG | + | chr3.1:74945038-74945057 | None:intergenic | 40.0% |
| ! | TGAGAATAGGGTATTAGGGA+AGG | - | chr3.1:74948939-74948958 | MS.gene049423:intron | 40.0% |
| ! | TTCGTCATCTTTTTGTGAGG+AGG | + | chr3.1:74945042-74945061 | None:intergenic | 40.0% |
| !! | ACGTCTTTGAAACATCGACA+CGG | - | chr3.1:74948209-74948228 | MS.gene049423:intron | 40.0% |
| !! | ATTAACATGATGGGCCTGTT+TGG | + | chr3.1:74944262-74944281 | None:intergenic | 40.0% |
| !! | CTTACAAGCCGGTTTTGTAA+GGG | + | chr3.1:74947632-74947651 | None:intergenic | 40.0% |
| !! | GCACCGTTACTTTGAGATAT+TGG | - | chr3.1:74944024-74944043 | MS.gene049423:intron | 40.0% |
| AACTACTCCTAACCTGTCGA+CGG | + | chr3.1:74946289-74946308 | None:intergenic | 45.0% | |
| AAGATTTGAAGGAGGGACAC+AGG | + | chr3.1:74946929-74946948 | None:intergenic | 45.0% | |
| AAGCAAGAACTGTCCCAAGT+AGG | + | chr3.1:74948054-74948073 | None:intergenic | 45.0% | |
| ACAGCCTATCCAAGATCTGT+TGG | + | chr3.1:74947791-74947810 | None:intergenic | 45.0% | |
| ACTTGGGGTCCATTATTGGT+TGG | - | chr3.1:74945588-74945607 | MS.gene049423:intron | 45.0% | |
| ACTTGGTCAACCTTCTTCTC+CGG | - | chr3.1:74945554-74945573 | MS.gene049423:intron | 45.0% | |
| AGGTCATATCTCACCCAATG+TGG | - | chr3.1:74947686-74947705 | MS.gene049423:intron | 45.0% | |
| AGTCTCATCACCTTACAAGC+CGG | + | chr3.1:74947643-74947662 | None:intergenic | 45.0% | |
| ATAACTTCCGTCGACAGGTT+AGG | - | chr3.1:74946279-74946298 | MS.gene049423:CDS | 45.0% | |
| ATCAAACCTGAGACCTTGAG+AGG | + | chr3.1:74944383-74944402 | None:intergenic | 45.0% | |
| ATGCAATTGTCCGGAGAAGA+AGG | + | chr3.1:74945567-74945586 | None:intergenic | 45.0% | |
| CAAGAAACATACTGCGCTGA+AGG | - | chr3.1:74944938-74944957 | MS.gene049423:intron | 45.0% | |
| CAGCCGAAGTAGAAACTTAG+AGG | + | chr3.1:74944695-74944714 | None:intergenic | 45.0% | |
| CAGCCTATCCAAGATCTGTT+GGG | + | chr3.1:74947790-74947809 | None:intergenic | 45.0% | |
| CATCACTTGGGGTCCATTAT+TGG | - | chr3.1:74945584-74945603 | MS.gene049423:intron | 45.0% | |
| CCACCGACAACATCAGTTAA+AGG | + | chr3.1:74943735-74943754 | None:intergenic | 45.0% | |
| CCTTTAACTGATGTTGTCGG+TGG | - | chr3.1:74943732-74943751 | MS.gene049423:CDS | 45.0% | |
| CTCTAAGCTTTACTCCCACT+TGG | - | chr3.1:74944317-74944336 | MS.gene049423:intron | 45.0% | |
| CTGAGGATGCATAACAAGCA+AGG | + | chr3.1:74948798-74948817 | None:intergenic | 45.0% | |
| GAAGATGCATGTTCCTATCC+TGG | - | chr3.1:74948411-74948430 | MS.gene049423:intron | 45.0% | |
| GATTCTATGGTCTAAGGGCA+TGG | - | chr3.1:74944635-74944654 | MS.gene049423:intron | 45.0% | |
| GGCTTTCAGATACAATGGTG+CGG | - | chr3.1:74946198-74946217 | MS.gene049423:intron | 45.0% | |
| GGTCATATCTCACCCAATGT+GGG | - | chr3.1:74947687-74947706 | MS.gene049423:intron | 45.0% | |
| GTAAGGAGGGAAGATCTTTG+TGG | - | chr3.1:74947550-74947569 | MS.gene049423:intron | 45.0% | |
| GTCTTCATCCCTCCTTGATA+AGG | - | chr3.1:74944553-74944572 | MS.gene049423:CDS | 45.0% | |
| GTGTGTTAAGTGTCCCACAT+TGG | + | chr3.1:74947703-74947722 | None:intergenic | 45.0% | |
| GTTACTCTTGTATGCCATGC+AGG | - | chr3.1:74945735-74945754 | MS.gene049423:intron | 45.0% | |
| TAACCTGTCGACGGAAGTTA+TGG | + | chr3.1:74946280-74946299 | None:intergenic | 45.0% | |
| TCCCAAGTAGGATGCTTGAA+TGG | + | chr3.1:74948042-74948061 | None:intergenic | 45.0% | |
| TCCGGACAATTGCATCACTT+GGG | - | chr3.1:74945572-74945591 | MS.gene049423:intron | 45.0% | |
| TGAGAGAGAATGTACTTGCC+CGG | - | chr3.1:74949227-74949246 | MS.gene049423:CDS | 45.0% | |
| TGCCATGCAGGAAACAATGA+CGG | - | chr3.1:74945747-74945766 | MS.gene049423:intron | 45.0% | |
| TTCCGTCATTGTTTCCTGCA+TGG | + | chr3.1:74945752-74945771 | None:intergenic | 45.0% | |
| ! | ATTAGGGAAGGAGGTATGCA+TGG | - | chr3.1:74948951-74948970 | MS.gene049423:intron | 45.0% |
| ! | ATTCTCCCGGATGCCAATTT+TGG | - | chr3.1:74944401-74944420 | MS.gene049423:intron | 45.0% |
| ! | CCAAAAGCAACACCGTCTTT+TGG | - | chr3.1:74945217-74945236 | MS.gene049423:intron | 45.0% |
| ! | CTTGAATGGTTAGTTGAGGG+AGG | + | chr3.1:74948028-74948047 | None:intergenic | 45.0% |
| ! | GAATAGGGTATTAGGGAAGG+AGG | - | chr3.1:74948942-74948961 | MS.gene049423:intron | 45.0% |
| ! | GCCCATCCCAAATTCTAAGA+TGG | + | chr3.1:74947818-74947837 | None:intergenic | 45.0% |
| !! | CCTTACAAAACCGGCTTGTA+AGG | - | chr3.1:74947630-74947649 | MS.gene049423:intron | 45.0% |
| !! | CCTTACAAGCCGGTTTTGTA+AGG | + | chr3.1:74947633-74947652 | None:intergenic | 45.0% |
| !!! | AAAGACGGTGTTGCTTTTGG+CGG | + | chr3.1:74945217-74945236 | None:intergenic | 45.0% |
| !!! | ACAGCTTCTCCACTTTTTCC+TGG | - | chr3.1:74943763-74943782 | MS.gene049423:CDS | 45.0% |
| !!! | CCAAAAGACGGTGTTGCTTT+TGG | + | chr3.1:74945220-74945239 | None:intergenic | 45.0% |
| !!! | TGTTGCTTTTGGCGGAAACA+TGG | + | chr3.1:74945209-74945228 | None:intergenic | 45.0% |
| !!! | TGTTTTGATACGCCGTCACA+TGG | - | chr3.1:74943851-74943870 | MS.gene049423:intron | 45.0% |
| AATCGGTACCAAACTGGTGC+TGG | + | chr3.1:74946449-74946468 | None:intergenic | 50.0% | |
| ACTACCAATGTCCTGCACAC+CGG | + | chr3.1:74949249-74949268 | None:intergenic | 50.0% | |
| ACTTACTGACACCTGGGACT+GGG | - | chr3.1:74947721-74947740 | MS.gene049423:intron | 50.0% | |
| AGATACAATGGTGCGGCAAG+TGG | - | chr3.1:74946205-74946224 | MS.gene049423:intron | 50.0% | |
| AGCGATGACCTGATAGCATG+TGG | - | chr3.1:74947764-74947783 | MS.gene049423:CDS | 50.0% | |
| AGCTCGCCAAAATTGGCATC+CGG | + | chr3.1:74944410-74944429 | None:intergenic | 50.0% | |
| AGCTTTACTCCCACTTGGGT+TGG | - | chr3.1:74944322-74944341 | MS.gene049423:intron | 50.0% | |
| AGTTCTTTGCCAATGCGGGT+TGG | - | chr3.1:74945528-74945547 | MS.gene049423:intron | 50.0% | |
| CCCCAAGTGATGCAATTGTC+CGG | + | chr3.1:74945576-74945595 | None:intergenic | 50.0% | |
| CCGGACAATTGCATCACTTG+GGG | - | chr3.1:74945573-74945592 | MS.gene049423:intron | 50.0% | |
| CTCCGGACAATTGCATCACT+TGG | - | chr3.1:74945571-74945590 | MS.gene049423:intron | 50.0% | |
| CTTTCTTGCCAGCACCAGTT+TGG | - | chr3.1:74946438-74946457 | MS.gene049423:intron | 50.0% | |
| GCTATTGTGTGCGCTGTTGA+TGG | - | chr3.1:74945678-74945697 | MS.gene049423:intron | 50.0% | |
| GGGGATATGCCCTATACTGA+AGG | + | chr3.1:74948595-74948614 | None:intergenic | 50.0% | |
| GGTCTCAGGTTTGATTCTCC+CGG | - | chr3.1:74944388-74944407 | MS.gene049423:intron | 50.0% | |
| GGTTGGACGCCTTCAGTATA+GGG | - | chr3.1:74948583-74948602 | MS.gene049423:intron | 50.0% | |
| TAAATGCAGGTACGTGCTGC+TGG | - | chr3.1:74948364-74948383 | MS.gene049423:intron | 50.0% | |
| TCAAGGGACAGGGAAACGTA+AGG | - | chr3.1:74947298-74947317 | MS.gene049423:intron | 50.0% | |
| TCTGCCGAGTCAGCTTATAG+AGG | - | chr3.1:74947519-74947538 | MS.gene049423:intron | 50.0% | |
| TGGCCCAACAGATCTTGGAT+AGG | - | chr3.1:74947784-74947803 | MS.gene049423:CDS | 50.0% | |
| TGGTAGTACCTGCTCATCTG+CGG | - | chr3.1:74949262-74949281 | MS.gene049423:CDS | 50.0% | |
| TTATGGATGGTGTGGGGACT+GGG | - | chr3.1:74947187-74947206 | MS.gene049423:intron | 50.0% | |
| TTTATGGATGGTGTGGGGAC+TGG | - | chr3.1:74947186-74947205 | MS.gene049423:intron | 50.0% | |
| ! | GCGAGGAGTGTGTATCTGAA+TGG | - | chr3.1:74948455-74948474 | MS.gene049423:intron | 50.0% |
| ! | GGTTAGTTGAGGGAGGTTGA+AGG | + | chr3.1:74948021-74948040 | None:intergenic | 50.0% |
| !! | CATGATGGGCCTGTTTGGAT+TGG | + | chr3.1:74944257-74944276 | None:intergenic | 50.0% |
| AATGGTGCGGCAAGTGGCAA+TGG | - | chr3.1:74946211-74946230 | MS.gene049423:intron | 55.0% | |
| AATGTACTTGCCCGGTGTGC+AGG | - | chr3.1:74949235-74949254 | MS.gene049423:CDS | 55.0% | |
| ACATGTGTCCACAGCGAACC+AGG | + | chr3.1:74948432-74948451 | None:intergenic | 55.0% | |
| ACGCCATAACTTCCGTCGAC+AGG | - | chr3.1:74946274-74946293 | MS.gene049423:CDS | 55.0% | |
| ATACACCAGGACACTGGGGA+TGG | + | chr3.1:74946064-74946083 | None:intergenic | 55.0% | |
| CACTTACTGACACCTGGGAC+TGG | - | chr3.1:74947720-74947739 | MS.gene049423:intron | 55.0% | |
| CCAAGTAAGCCAACCCGCAT+TGG | + | chr3.1:74945540-74945559 | None:intergenic | 55.0% | |
| CTACCAATGTCCTGCACACC+GGG | + | chr3.1:74949248-74949267 | None:intergenic | 55.0% | |
| CTGTGGACACATGTTCTGCG+AGG | - | chr3.1:74948438-74948457 | MS.gene049423:intron | 55.0% | |
| CTGTTGGGCCACATGCTATC+AGG | + | chr3.1:74947775-74947794 | None:intergenic | 55.0% | |
| CTTGGAGTGTGCTCCTCTCA+AGG | - | chr3.1:74944367-74944386 | MS.gene049423:intron | 55.0% | |
| GCATGTGGCCCAACAGATCT+TGG | - | chr3.1:74947779-74947798 | MS.gene049423:CDS | 55.0% | |
| GCGTTTGTGTAAGCTCGCAC+AGG | - | chr3.1:74944106-74944125 | MS.gene049423:intron | 55.0% | |
| GCTCGCCAAAATTGGCATCC+GGG | + | chr3.1:74944409-74944428 | None:intergenic | 55.0% | |
| GGGTTGGACGCCTTCAGTAT+AGG | - | chr3.1:74948582-74948601 | MS.gene049423:intron | 55.0% | |
| TACACCAGGACACTGGGGAT+GGG | + | chr3.1:74946063-74946082 | None:intergenic | 55.0% | |
| TGTCCACAGCGAACCAGGAT+AGG | + | chr3.1:74948427-74948446 | None:intergenic | 55.0% | |
| TGTGCTCCTCTCAAGGTCTC+AGG | - | chr3.1:74944374-74944393 | MS.gene049423:intron | 55.0% | |
| TTGGCGGAAACATGGCCAGA+GGG | + | chr3.1:74945201-74945220 | None:intergenic | 55.0% | |
| TTTGGCGGAAACATGGCCAG+AGG | + | chr3.1:74945202-74945221 | None:intergenic | 55.0% | |
| ! | AGAGGCTCACCGTGCTATTG+CGG | - | chr3.1:74943689-74943708 | MS.gene049423:CDS | 55.0% |
| ! | CATCTGCGGACCTTTGGAGA+TGG | - | chr3.1:74949276-74949295 | MS.gene049423:CDS | 55.0% |
| ! | CTTGAGAGGAGCACACTCCA+AGG | + | chr3.1:74944369-74944388 | None:intergenic | 55.0% |
| ! | GTTCCTATCCTGGTTCGCTG+TGG | - | chr3.1:74948421-74948440 | MS.gene049423:intron | 55.0% |
| !! | CCAATGCGGGTTGGCTTACT+TGG | - | chr3.1:74945537-74945556 | MS.gene049423:intron | 55.0% |
| !! | GTGGTATTGGCTTGGGACCT+TGG | - | chr3.1:74944349-74944368 | MS.gene049423:intron | 55.0% |
| !! | TGGCCTGGTGGTATTGGCTT+GGG | - | chr3.1:74944342-74944361 | MS.gene049423:intron | 55.0% |
| !! | TTGGCCTGGTGGTATTGGCT+TGG | - | chr3.1:74944341-74944360 | MS.gene049423:intron | 55.0% |
| !! | TTGGGTTGGCCTGGTGGTAT+TGG | - | chr3.1:74944336-74944355 | MS.gene049423:intron | 55.0% |
| ACCACCAGGCCAACCCAAGT+GGG | + | chr3.1:74944334-74944353 | None:intergenic | 60.0% | |
| CCAAAGGTCCGCAGATGAGC+AGG | + | chr3.1:74949273-74949292 | None:intergenic | 60.0% | |
| CCTGCTCATCTGCGGACCTT+TGG | - | chr3.1:74949270-74949289 | MS.gene049423:CDS | 60.0% | |
| CTCTGTCCGCCGCAATAGCA+CGG | + | chr3.1:74943701-74943720 | None:intergenic | 60.0% | |
| GATGGTGTGGGGACTGGGAA+GGG | - | chr3.1:74947192-74947211 | MS.gene049423:intron | 60.0% | |
| GGTCCCAAGCCAATACCACC+AGG | + | chr3.1:74944348-74944367 | None:intergenic | 60.0% | |
| TACCACCAGGCCAACCCAAG+TGG | + | chr3.1:74944335-74944354 | None:intergenic | 60.0% | |
| TCTTCCCATCCCCAGTGTCC+TGG | - | chr3.1:74946056-74946075 | MS.gene049423:intron | 60.0% | |
| TTGCCCGGTGTGCAGGACAT+TGG | - | chr3.1:74949242-74949261 | MS.gene049423:CDS | 60.0% | |
| !! | TACTCCCACTTGGGTTGGCC+TGG | - | chr3.1:74944327-74944346 | MS.gene049423:intron | 60.0% |
| GACACCTGGGACTGGGCATC+TGG | - | chr3.1:74947728-74947747 | MS.gene049423:intron | 65.0% | |
| GGATGGTGTGGGGACTGGGA+AGG | - | chr3.1:74947191-74947210 | MS.gene049423:intron | 65.0% | |
| ! | GGCTCACCGTGCTATTGCGG+CGG | - | chr3.1:74943692-74943711 | MS.gene049423:CDS | 65.0% |
| !! | TCCCACTTGGGTTGGCCTGG+TGG | - | chr3.1:74944330-74944349 | MS.gene049423:intron | 65.0% |
| CGCACCAGATGCCCAGTCCC+AGG | + | chr3.1:74947735-74947754 | None:intergenic | 70.0% | |
| GGGACTGGGCATCTGGTGCG+TGG | - | chr3.1:74947735-74947754 | MS.gene049423:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 74943678 | 74949329 | 74943678 | ID=MS.gene049423 |
| chr3.1 | mRNA | 74943678 | 74949329 | 74943678 | ID=MS.gene049423.t1;Parent=MS.gene049423 |
| chr3.1 | exon | 74949131 | 74949329 | 74949131 | ID=MS.gene049423.t1.exon1;Parent=MS.gene049423.t1 |
| chr3.1 | CDS | 74949131 | 74949329 | 74949131 | ID=cds.MS.gene049423.t1;Parent=MS.gene049423.t1 |
| chr3.1 | exon | 74948048 | 74948124 | 74948048 | ID=MS.gene049423.t1.exon2;Parent=MS.gene049423.t1 |
| chr3.1 | CDS | 74948048 | 74948124 | 74948048 | ID=cds.MS.gene049423.t1;Parent=MS.gene049423.t1 |
| chr3.1 | exon | 74947739 | 74947907 | 74947739 | ID=MS.gene049423.t1.exon3;Parent=MS.gene049423.t1 |
| chr3.1 | CDS | 74947739 | 74947907 | 74947739 | ID=cds.MS.gene049423.t1;Parent=MS.gene049423.t1 |
| chr3.1 | exon | 74946712 | 74946800 | 74946712 | ID=MS.gene049423.t1.exon4;Parent=MS.gene049423.t1 |
| chr3.1 | CDS | 74946712 | 74946800 | 74946712 | ID=cds.MS.gene049423.t1;Parent=MS.gene049423.t1 |
| chr3.1 | exon | 74946451 | 74946615 | 74946451 | ID=MS.gene049423.t1.exon5;Parent=MS.gene049423.t1 |
| chr3.1 | CDS | 74946451 | 74946615 | 74946451 | ID=cds.MS.gene049423.t1;Parent=MS.gene049423.t1 |
| chr3.1 | exon | 74946268 | 74946345 | 74946268 | ID=MS.gene049423.t1.exon6;Parent=MS.gene049423.t1 |
| chr3.1 | CDS | 74946268 | 74946345 | 74946268 | ID=cds.MS.gene049423.t1;Parent=MS.gene049423.t1 |
| chr3.1 | exon | 74944531 | 74944634 | 74944531 | ID=MS.gene049423.t1.exon7;Parent=MS.gene049423.t1 |
| chr3.1 | CDS | 74944531 | 74944634 | 74944531 | ID=cds.MS.gene049423.t1;Parent=MS.gene049423.t1 |
| chr3.1 | exon | 74943678 | 74943783 | 74943678 | ID=MS.gene049423.t1.exon8;Parent=MS.gene049423.t1 |
| chr3.1 | CDS | 74943678 | 74943783 | 74943678 | ID=cds.MS.gene049423.t1;Parent=MS.gene049423.t1 |
| Gene Sequence |
| Protein sequence |
