Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06554.t1 | XP_013461478.2 | 89.9 | 328 | 33 | 0 | 1 | 328 | 26 | 353 | 4.30E-166 | 594 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06554.t1 | Q5M7Z0 | 29.6 | 314 | 209 | 8 | 20 | 326 | 125 | 433 | 1.2e-28 | 128.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06554.t1 | A0A396IZB5 | 89.9 | 328 | 33 | 0 | 1 | 328 | 26 | 353 | 3.1e-166 | 594.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049423 | MS.gene06554 | 0.839966 | 1.15E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06554.t1 | MTR_3g093660 | 88.506 | 261 | 30 | 0 | 1 | 261 | 26 | 286 | 5.35e-161 | 451 |
| MS.gene06554.t1 | MTR_5g068460 | 69.333 | 300 | 91 | 1 | 28 | 327 | 182 | 480 | 4.21e-153 | 438 |
| MS.gene06554.t1 | MTR_7g074140 | 62.583 | 302 | 113 | 0 | 26 | 327 | 124 | 425 | 8.62e-134 | 387 |
| MS.gene06554.t1 | MTR_5g007710 | 48.214 | 56 | 29 | 0 | 255 | 310 | 280 | 335 | 5.43e-12 | 66.6 |
| MS.gene06554.t1 | MTR_5g007710 | 48.214 | 56 | 29 | 0 | 255 | 310 | 280 | 335 | 8.20e-12 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06554.t1 | AT5G01960 | 62.136 | 309 | 117 | 0 | 18 | 326 | 116 | 424 | 3.16e-145 | 416 |
| MS.gene06554.t1 | AT1G65040 | 44.828 | 58 | 32 | 0 | 255 | 312 | 280 | 337 | 5.02e-11 | 63.9 |
| MS.gene06554.t1 | AT1G65040 | 44.828 | 58 | 32 | 0 | 255 | 312 | 257 | 314 | 5.08e-11 | 63.9 |
| MS.gene06554.t1 | AT1G65040 | 45.614 | 57 | 31 | 0 | 255 | 311 | 209 | 265 | 6.05e-11 | 63.5 |
| MS.gene06554.t1 | AT1G65040 | 45.614 | 57 | 31 | 0 | 255 | 311 | 127 | 183 | 6.09e-11 | 62.4 |
| MS.gene06554.t1 | AT1G65040 | 44.262 | 61 | 34 | 0 | 255 | 315 | 101 | 161 | 7.43e-11 | 62.4 |
| MS.gene06554.t1 | AT1G65040 | 44.828 | 58 | 32 | 0 | 255 | 312 | 139 | 196 | 8.00e-11 | 62.8 |
Find 55 sgRNAs with CRISPR-Local
Find 375 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAGAAGACGAAATTCTTTA+TGG | 0.134162 | 3.2:-78569921 | MS.gene06554:CDS |
| GAACGCAATATTCATCATTT+TGG | 0.200530 | 3.2:-78571376 | MS.gene06554:CDS |
| CCAAAAGATGGTGTTGCTTT+TGG | 0.234388 | 3.2:+78571399 | None:intergenic |
| ATCAACAACAAGAGCGAAAA+AGG | 0.256421 | 3.2:+78572775 | None:intergenic |
| CCACCGACAACATCAGTTAA+AGG | 0.319245 | 3.2:+78572871 | None:intergenic |
| CCAAAAGCAACACCATCTTT+TGG | 0.327744 | 3.2:-78571399 | MS.gene06554:CDS |
| GCAGATTTCTTTGTCACAAT+TGG | 0.363731 | 3.2:-78571737 | MS.gene06554:intron |
| CTATGCATTTACGAGTGTTA+TGG | 0.387657 | 3.2:-78571459 | MS.gene06554:CDS |
| CCTGCTCATCTGCGGACCTT+TGG | 0.398301 | 3.2:-78567347 | MS.gene06554:CDS |
| GTGTATCAGCTGTAATGTTC+AGG | 0.404247 | 3.2:-78571715 | MS.gene06554:CDS |
| TAACCTGTCGACGGAAGTTA+TGG | 0.418408 | 3.2:+78570339 | None:intergenic |
| GTCCCTTTAACTGATGTTGT+CGG | 0.452080 | 3.2:-78572874 | MS.gene06554:CDS |
| CTTTCTTGCCAGCACCAGTT+TGG | 0.452560 | 3.2:-78570178 | MS.gene06554:CDS |
| AATGTACTTGCCCGGTGTGC+AGG | 0.460660 | 3.2:-78567382 | MS.gene06554:CDS |
| CTACCAATGTCCTGCACACC+GGG | 0.467233 | 3.2:+78567372 | None:intergenic |
| CACCGACAACATCAGTTAAA+GGG | 0.474359 | 3.2:+78572872 | None:intergenic |
| CCAAAGGTCCGCAGATGAGC+AGG | 0.477758 | 3.2:+78567347 | None:intergenic |
| CTCTTCTCATCAATTATCAC+AGG | 0.485206 | 3.2:-78570122 | MS.gene06554:CDS |
| AATCGGTACCAAACTGGTGC+TGG | 0.486207 | 3.2:+78570170 | None:intergenic |
| CAAGGGTCAAATCTTAACTC+TGG | 0.491542 | 3.2:-78570228 | MS.gene06554:intron |
| GAAGATGCATGTTCCTATCC+TGG | 0.496904 | 3.2:-78568206 | MS.gene06554:CDS |
| TAGGAACATGCATCTTCTCT+TGG | 0.500016 | 3.2:+78568212 | None:intergenic |
| ACGCCATAACTTCCGTCGAC+AGG | 0.500970 | 3.2:-78570342 | MS.gene06554:intron |
| TGTTTATGCTACATCAGAAC+AGG | 0.501816 | 3.2:-78569898 | MS.gene06554:intron |
| TAAATGCAGGTACGTGCTGC+TGG | 0.508684 | 3.2:-78568253 | MS.gene06554:intron |
| AATATTGCGTTCCCAAAAGA+TGG | 0.512320 | 3.2:+78571387 | None:intergenic |
| TGTCCACAGCGAACCAGGAT+AGG | 0.526498 | 3.2:+78568193 | None:intergenic |
| TGAGAGAGAATGTACTTGCC+CGG | 0.526955 | 3.2:-78567390 | MS.gene06554:CDS |
| CATCTGCGGACCTTTGGAGA+TGG | 0.534634 | 3.2:-78567341 | MS.gene06554:CDS |
| CTCTGTCCGCCGCAATAGCA+CGG | 0.540543 | 3.2:+78572905 | None:intergenic |
| ACATGTGTCCACAGCGAACC+AGG | 0.543274 | 3.2:+78568188 | None:intergenic |
| AATGGTGCGGCAAGTGGCAA+TGG | 0.548641 | 3.2:-78570405 | MS.gene06554:CDS |
| CAAGAAACATACTGCGCTGA+AGG | 0.554124 | 3.2:-78571678 | MS.gene06554:intron |
| TTGCCCGGTGTGCAGGACAT+TGG | 0.557576 | 3.2:-78567375 | MS.gene06554:CDS |
| GTTAACATCTGCAGTTGAGA+AGG | 0.561594 | 3.2:-78570081 | MS.gene06554:intron |
| AGATACAATGGTGCGGCAAG+TGG | 0.567277 | 3.2:-78570411 | MS.gene06554:CDS |
| CCTTTAACTGATGTTGTCGG+TGG | 0.583319 | 3.2:-78572871 | MS.gene06554:CDS |
| GAATGTGATGTTCTCTGAAG+AGG | 0.584677 | 3.2:-78572932 | None:intergenic |
| TCATTGGCTTTCAGATACAA+TGG | 0.588648 | 3.2:-78570423 | MS.gene06554:intron |
| GCGAGGAGTGTGTATCTGAA+TGG | 0.594730 | 3.2:-78568162 | MS.gene06554:intron |
| ACATCAGTTAAAGGGACTAA+CGG | 0.601383 | 3.2:+78572880 | None:intergenic |
| AGAGGCTCACCGTGCTATTG+CGG | 0.605547 | 3.2:-78572914 | MS.gene06554:CDS |
| AAAAGAGAGAGCAAGAAGAG+CGG | 0.612995 | 3.2:+78571500 | None:intergenic |
| GGCTCACCGTGCTATTGCGG+CGG | 0.614817 | 3.2:-78572911 | MS.gene06554:CDS |
| ACTACCAATGTCCTGCACAC+CGG | 0.615463 | 3.2:+78567371 | None:intergenic |
| AACTACTCCTAACCTGTCGA+CGG | 0.623342 | 3.2:+78570330 | None:intergenic |
| AAATCATACATTCCATGTGA+CGG | 0.624468 | 3.2:+78572740 | None:intergenic |
| GTTCCTATCCTGGTTCGCTG+TGG | 0.632151 | 3.2:-78568196 | MS.gene06554:CDS |
| TTGGCGGAAACATGGCCAGA+GGG | 0.641387 | 3.2:+78571418 | None:intergenic |
| ACTTGTTGATCCATCTCCAA+AGG | 0.643362 | 3.2:+78567331 | None:intergenic |
| GGCTTTCAGATACAATGGTG+CGG | 0.644614 | 3.2:-78570418 | MS.gene06554:intron |
| TGGTAGTACCTGCTCATCTG+CGG | 0.645210 | 3.2:-78567355 | MS.gene06554:CDS |
| AATCTGCTGAAAATCAAACC+AGG | 0.658542 | 3.2:+78572822 | None:intergenic |
| TTTGGCGGAAACATGGCCAG+AGG | 0.658754 | 3.2:+78571417 | None:intergenic |
| CTGTGGACACATGTTCTGCG+AGG | 0.696401 | 3.2:-78568179 | MS.gene06554:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATTGTAATAAGTTTATT+TGG | + | chr3.2:78569395-78569414 | None:intergenic | 10.0% |
| !! | ATATACTAATATTTGTATAA+TGG | - | chr3.2:78571911-78571930 | MS.gene06554:intron | 10.0% |
| !! | TTATTCTATAATATAAAAGA+AGG | + | chr3.2:78572762-78572781 | None:intergenic | 10.0% |
| !!! | ATCATATTCTTTTTTTTTTA+AGG | + | chr3.2:78570839-78570858 | None:intergenic | 10.0% |
| !! | AAAGGAATTATATACTTAAA+TGG | - | chr3.2:78570585-78570604 | MS.gene06554:intron | 15.0% |
| !! | CTATAAAAGTTATTGAAAAT+TGG | - | chr3.2:78570490-78570509 | MS.gene06554:intron | 15.0% |
| !! | TAAACAAAGTTATTCAAATT+TGG | + | chr3.2:78569114-78569133 | None:intergenic | 15.0% |
| !! | TCTAAAAATGTGTTTATAAA+TGG | + | chr3.2:78571504-78571523 | None:intergenic | 15.0% |
| !! | TTTCAAAATGAAAATTCTAA+AGG | + | chr3.2:78568607-78568626 | None:intergenic | 15.0% |
| !!! | AAAGAAAATGGAATAATTTT+GGG | + | chr3.2:78570240-78570259 | None:intergenic | 15.0% |
| !!! | AAATGTTTTAAATTGTTTCA+AGG | - | chr3.2:78569989-78570008 | MS.gene06554:intron | 15.0% |
| !!! | AAATTTGAATAACTTTGTTT+AGG | - | chr3.2:78569113-78569132 | MS.gene06554:intron | 15.0% |
| !!! | AATGTTTTAAATTGTTTCAA+GGG | - | chr3.2:78569990-78570009 | MS.gene06554:intron | 15.0% |
| !!! | AATTTGAATAACTTTGTTTA+GGG | - | chr3.2:78569114-78569133 | MS.gene06554:intron | 15.0% |
| !!! | ATTTAAGACAAATAAACTAT+AGG | - | chr3.2:78572151-78572170 | MS.gene06554:intron | 15.0% |
| !!! | TAAAGAAAATGGAATAATTT+TGG | + | chr3.2:78570241-78570260 | None:intergenic | 15.0% |
| !!! | TTTTATGTTCAAAACAAAAA+TGG | + | chr3.2:78568343-78568362 | None:intergenic | 15.0% |
| !! | AAAAATGATCTGATTAAATC+TGG | - | chr3.2:78570371-78570390 | MS.gene06554:CDS | 20.0% |
| !! | AAAAATGTGTTTATAAATGG+TGG | + | chr3.2:78571501-78571520 | None:intergenic | 20.0% |
| !! | AAAATGTGTTTATAAATGGT+GGG | + | chr3.2:78571500-78571519 | None:intergenic | 20.0% |
| !! | AAATTGTGGAATATATCAAT+TGG | - | chr3.2:78569271-78569290 | MS.gene06554:intron | 20.0% |
| !! | AGAAGTAACAGATAATTATT+TGG | - | chr3.2:78572179-78572198 | MS.gene06554:intron | 20.0% |
| !! | ATAAATTCAGAAGATGAAAA+TGG | - | chr3.2:78572346-78572365 | MS.gene06554:intron | 20.0% |
| !! | ATAACCAATTTAATACAGAT+AGG | + | chr3.2:78572598-78572617 | None:intergenic | 20.0% |
| !! | ATAAGGTAATAAAAACAACA+TGG | - | chr3.2:78568187-78568206 | MS.gene06554:CDS | 20.0% |
| !! | ATATCATACAGTTAAATTGA+TGG | + | chr3.2:78568462-78568481 | None:intergenic | 20.0% |
| !! | GAAGTAACAGATAATTATTT+GGG | - | chr3.2:78572180-78572199 | MS.gene06554:intron | 20.0% |
| !! | GTAAACCTAAAATAATTATG+TGG | + | chr3.2:78572269-78572288 | None:intergenic | 20.0% |
| !! | TAACCAATTTAATACAGATA+GGG | + | chr3.2:78572597-78572616 | None:intergenic | 20.0% |
| !! | TAATCTACATATACAAACAA+GGG | + | chr3.2:78571063-78571082 | None:intergenic | 20.0% |
| !! | TAATGTATCAATTATGGAAA+TGG | - | chr3.2:78572624-78572643 | MS.gene06554:intron | 20.0% |
| !! | TAGTGTAATCTTTAATCATA+TGG | - | chr3.2:78567593-78567612 | MS.gene06554:intron | 20.0% |
| !! | TATCTGTATTAAATTGGTTA+TGG | - | chr3.2:78572597-78572616 | MS.gene06554:intron | 20.0% |
| !! | TCATTTATGCAATCAAATAA+AGG | - | chr3.2:78570567-78570586 | MS.gene06554:intron | 20.0% |
| !! | TGATATTATCACATAAATTG+TGG | - | chr3.2:78569257-78569276 | MS.gene06554:intron | 20.0% |
| !! | TTAAAGACTAAAGTATATCA+AGG | - | chr3.2:78569034-78569053 | MS.gene06554:intron | 20.0% |
| !! | TTAATCTACATATACAAACA+AGG | + | chr3.2:78571064-78571083 | None:intergenic | 20.0% |
| !!! | AAAAGCATACATAAAGAAAT+CGG | + | chr3.2:78572477-78572496 | None:intergenic | 20.0% |
| !!! | AAGCTTTCATTCTTTAAAAT+TGG | - | chr3.2:78570178-78570197 | MS.gene06554:CDS | 20.0% |
| !!! | AATTTTAGAGGTTTAAGATA+AGG | - | chr3.2:78570520-78570539 | MS.gene06554:intron | 20.0% |
| !!! | ATAATAGAACAGCATTTTTA+TGG | - | chr3.2:78570789-78570808 | MS.gene06554:intron | 20.0% |
| !!! | ATATTCATCATTTTGGTTAA+TGG | - | chr3.2:78568866-78568885 | MS.gene06554:intron | 20.0% |
| !!! | ATGTTTCTTTTAGAATTTTC+AGG | - | chr3.2:78569325-78569344 | MS.gene06554:intron | 20.0% |
| !!! | ATTTCTTTATGTATGCTTTT+CGG | - | chr3.2:78572477-78572496 | MS.gene06554:intron | 20.0% |
| !!! | ATTTTAGAGGTTTAAGATAA+GGG | - | chr3.2:78570521-78570540 | MS.gene06554:intron | 20.0% |
| !!! | CAATTATTCTAATTCTTTTG+TGG | - | chr3.2:78569750-78569769 | MS.gene06554:intron | 20.0% |
| !!! | GTTTTTGTATACTTTTTTTG+TGG | - | chr3.2:78570938-78570957 | MS.gene06554:intron | 20.0% |
| !!! | TGTTTCTTTTAGAATTTTCA+GGG | - | chr3.2:78569326-78569345 | MS.gene06554:intron | 20.0% |
| !!! | TTGTTTTTATTACCTTATCA+AGG | + | chr3.2:78568185-78568204 | None:intergenic | 20.0% |
| ! | AAACTATACTTGAAAACTAC+AGG | + | chr3.2:78569951-78569970 | None:intergenic | 25.0% |
| ! | AAAGTTTCAAATGCTTATCA+AGG | - | chr3.2:78570899-78570918 | MS.gene06554:intron | 25.0% |
| ! | AAATGTTAAGAGTTTCACAA+TGG | + | chr3.2:78571538-78571557 | None:intergenic | 25.0% |
| ! | AACCAATTTAATACAGATAG+GGG | + | chr3.2:78572596-78572615 | None:intergenic | 25.0% |
| ! | AAGTTTCAAATGCTTATCAA+GGG | - | chr3.2:78570900-78570919 | MS.gene06554:intron | 25.0% |
| ! | ACAATTCTGATAATCAATTG+AGG | + | chr3.2:78572243-78572262 | None:intergenic | 25.0% |
| ! | AGATTAACAAAGTATGTTGT+GGG | + | chr3.2:78570630-78570649 | None:intergenic | 25.0% |
| ! | AGCAGCATTAAATAACAAAA+GGG | + | chr3.2:78571884-78571903 | None:intergenic | 25.0% |
| ! | AGTCCATGTAAAAGAAAAAT+CGG | + | chr3.2:78570085-78570104 | None:intergenic | 25.0% |
| ! | AGTTAGTGTGTTATGTTAAT+AGG | - | chr3.2:78568377-78568396 | MS.gene06554:intron | 25.0% |
| ! | ATAAATGAAGATTTGAAGGA+GGG | + | chr3.2:78570555-78570574 | None:intergenic | 25.0% |
| ! | ATAATCAATTGAGGCAATTT+AGG | + | chr3.2:78572234-78572253 | None:intergenic | 25.0% |
| ! | ATCAATTAAAATGAGAAGTG+CGG | + | chr3.2:78569241-78569260 | None:intergenic | 25.0% |
| ! | CAAGTAAAAACTATGAAGAT+TGG | + | chr3.2:78570993-78571012 | None:intergenic | 25.0% |
| ! | GACAATTTATTTGCTTTATC+AGG | - | chr3.2:78568942-78568961 | MS.gene06554:intron | 25.0% |
| ! | GATAAAGCAAATAAATTGTC+TGG | + | chr3.2:78568942-78568961 | None:intergenic | 25.0% |
| ! | GATGACAAAAAAAATTAGAG+AGG | - | chr3.2:78568672-78568691 | MS.gene06554:intron | 25.0% |
| ! | GCATGAAAAATACTTCAAAT+TGG | + | chr3.2:78569467-78569486 | None:intergenic | 25.0% |
| ! | GGAAGATAATGTATCAATTA+TGG | - | chr3.2:78572618-78572637 | MS.gene06554:intron | 25.0% |
| ! | GGATAATGTATACTTTCATA+AGG | - | chr3.2:78571774-78571793 | MS.gene06554:intron | 25.0% |
| ! | GGATTCTTTATATGATTATG+TGG | - | chr3.2:78571795-78571814 | MS.gene06554:intron | 25.0% |
| ! | GTTAGTGTGTTATGTTAATA+GGG | - | chr3.2:78568378-78568397 | MS.gene06554:intron | 25.0% |
| ! | TAAATTAATGCAACAGTCTT+CGG | - | chr3.2:78570665-78570684 | MS.gene06554:intron | 25.0% |
| ! | TAACAGATAATTATTTGGGT+TGG | - | chr3.2:78572184-78572203 | MS.gene06554:intron | 25.0% |
| ! | TAAGGATCATTACAAAAACA+CGG | + | chr3.2:78567908-78567927 | None:intergenic | 25.0% |
| ! | TAATCAATTGAGGCAATTTA+GGG | + | chr3.2:78572233-78572252 | None:intergenic | 25.0% |
| ! | TAGCAGCATTAAATAACAAA+AGG | + | chr3.2:78571885-78571904 | None:intergenic | 25.0% |
| ! | TATGTTCAAAACAAAAATGG+TGG | + | chr3.2:78568340-78568359 | None:intergenic | 25.0% |
| ! | TCACCTAATAAACATATAGA+CGG | + | chr3.2:78570265-78570284 | None:intergenic | 25.0% |
| ! | TTAGTGTGTTATGTTAATAG+GGG | - | chr3.2:78568379-78568398 | MS.gene06554:intron | 25.0% |
| ! | TTGCATAAATGAAGATTTGA+AGG | + | chr3.2:78570559-78570578 | None:intergenic | 25.0% |
| !! | AATTTGTTTAGTTGTATGCT+TGG | - | chr3.2:78570754-78570773 | MS.gene06554:intron | 25.0% |
| !! | AGTCTTTTGTATTTAATCAG+TGG | - | chr3.2:78569081-78569100 | MS.gene06554:intron | 25.0% |
| !! | ATACAGTTAAATTGATGGAT+TGG | + | chr3.2:78568457-78568476 | None:intergenic | 25.0% |
| !! | ATTGGATATGCAAATTTTAG+AGG | - | chr3.2:78570508-78570527 | MS.gene06554:intron | 25.0% |
| !! | GTCTTTTGTATTTAATCAGT+GGG | - | chr3.2:78569082-78569101 | MS.gene06554:intron | 25.0% |
| !! | GTTGTCCACATAATTATTTT+AGG | - | chr3.2:78572261-78572280 | MS.gene06554:intron | 25.0% |
| !! | TCTTCATAGTTTTTACTTGT+TGG | - | chr3.2:78570994-78571013 | MS.gene06554:intron | 25.0% |
| !! | TTTTATTACCTTATCAAGGA+GGG | + | chr3.2:78568181-78568200 | None:intergenic | 25.0% |
| !! | TTTTTATTACCTTATCAAGG+AGG | + | chr3.2:78568182-78568201 | None:intergenic | 25.0% |
| !! | TTTTTCTTTTACATGGACTT+TGG | - | chr3.2:78570086-78570105 | MS.gene06554:CDS | 25.0% |
| !!! | AAGTTTTGATCCAAAATTTG+CGG | - | chr3.2:78569426-78569445 | MS.gene06554:intron | 25.0% |
| !!! | ATGCCAAATTTTAAGTGTAA+CGG | + | chr3.2:78572296-78572315 | None:intergenic | 25.0% |
| !!! | TTATAGAGGTTTTAGAAGTA+AGG | - | chr3.2:78571151-78571170 | MS.gene06554:intron | 25.0% |
| !!! | TTTTTCTCTAGTCTTTTTAC+CGG | - | chr3.2:78571940-78571959 | MS.gene06554:intron | 25.0% |
| !!! | TTTTTTGTCATCTTTTTGTG+AGG | + | chr3.2:78568664-78568683 | None:intergenic | 25.0% |
| AAAACTGCTTAAATGCAAAC+AGG | + | chr3.2:78569532-78569551 | None:intergenic | 30.0% | |
| AAAATCAAACCAGGAAAAAG+TGG | + | chr3.2:78567407-78567426 | None:intergenic | 30.0% | |
| AAACTTCAAAACTGAGTCTA+TGG | - | chr3.2:78572716-78572735 | MS.gene06554:intron | 30.0% | |
| AAATCATACATTCCATGTGA+CGG | + | chr3.2:78567498-78567517 | None:intergenic | 30.0% | |
| AAATGTGGCTAATAATTGTG+TGG | - | chr3.2:78572530-78572549 | MS.gene06554:intron | 30.0% | |
| AAGCTTTCAGAAAAAAGATG+AGG | + | chr3.2:78570876-78570895 | None:intergenic | 30.0% | |
| AATCAATTGAGGCAATTTAG+GGG | + | chr3.2:78572232-78572251 | None:intergenic | 30.0% | |
| ACACACAAAAATAATACACC+AGG | + | chr3.2:78569696-78569715 | None:intergenic | 30.0% | |
| ACCAATTTAATACAGATAGG+GGG | + | chr3.2:78572595-78572614 | None:intergenic | 30.0% | |
| ACTAAAGTATATCAAGGATG+TGG | - | chr3.2:78569040-78569059 | MS.gene06554:intron | 30.0% | |
| AGCATTAAATAACAAAAGGG+AGG | + | chr3.2:78571881-78571900 | None:intergenic | 30.0% | |
| AGCTTAGAGATTATCAAGTA+AGG | + | chr3.2:78567926-78567945 | None:intergenic | 30.0% | |
| ATATAGACGGGTAAAGAAAA+TGG | + | chr3.2:78570252-78570271 | None:intergenic | 30.0% | |
| CAAGTCTAATAAATAGTCTG+AGG | + | chr3.2:78572433-78572452 | None:intergenic | 30.0% | |
| CACCTAATAAACATATAGAC+GGG | + | chr3.2:78570264-78570283 | None:intergenic | 30.0% | |
| CAGATTAACAAAGTATGTTG+TGG | + | chr3.2:78570631-78570650 | None:intergenic | 30.0% | |
| CATAAATGAAGATTTGAAGG+AGG | + | chr3.2:78570556-78570575 | None:intergenic | 30.0% | |
| GACACAATTAAATGCAAACA+AGG | + | chr3.2:78571198-78571217 | None:intergenic | 30.0% | |
| GTATTACTGTTTGTAAACAG+TGG | - | chr3.2:78571570-78571589 | MS.gene06554:intron | 30.0% | |
| GTTAGATAACCAACCAATAA+TGG | + | chr3.2:78569219-78569238 | None:intergenic | 30.0% | |
| TAAAGGACTTGCATAGTTAT+GGG | + | chr3.2:78568590-78568609 | None:intergenic | 30.0% | |
| TAAATGCAAACAGGCAAATT+TGG | + | chr3.2:78569523-78569542 | None:intergenic | 30.0% | |
| TACCCGTCTATATGTTTATT+AGG | - | chr3.2:78570259-78570278 | MS.gene06554:intron | 30.0% | |
| TCAGAAGACGAAATTCTTTA+TGG | - | chr3.2:78570314-78570333 | MS.gene06554:intron | 30.0% | |
| TCGGTTATAGTAAAAAGATG+TGG | - | chr3.2:78570684-78570703 | MS.gene06554:intron | 30.0% | |
| TCTCCGTTACACTTAAAATT+TGG | - | chr3.2:78572290-78572309 | MS.gene06554:intron | 30.0% | |
| TGCAAATGTTTATAAGTGGT+GGG | + | chr3.2:78571285-78571304 | None:intergenic | 30.0% | |
| TTAATTGCGTAGTGATTCTA+TGG | - | chr3.2:78568239-78568258 | MS.gene06554:CDS | 30.0% | |
| TTTCCTCTAAGTTTCTACTT+CGG | - | chr3.2:78568308-78568327 | MS.gene06554:intron | 30.0% | |
| ! | AAGTGTTGCATTGTTAAATG+TGG | - | chr3.2:78572515-78572534 | MS.gene06554:intron | 30.0% |
| ! | AATTCGATTTCTGTTTTGCA+GGG | - | chr3.2:78568698-78568717 | MS.gene06554:intron | 30.0% |
| ! | ATATTTGCTAGATATTGCAG+TGG | - | chr3.2:78572316-78572335 | MS.gene06554:intron | 30.0% |
| ! | CTTTCATTTTCTTAAGTGCT+TGG | - | chr3.2:78571753-78571772 | MS.gene06554:intron | 30.0% |
| ! | GAACGCAATATTCATCATTT+TGG | - | chr3.2:78568859-78568878 | MS.gene06554:intron | 30.0% |
| ! | TAAGTTGAGTATCTAAATGC+AGG | - | chr3.2:78571969-78571988 | MS.gene06554:intron | 30.0% |
| ! | TAGAACAGCATTTTTATGGA+TGG | - | chr3.2:78570793-78570812 | MS.gene06554:intron | 30.0% |
| ! | TTCTTTTGTCCTTCAAATGT+TGG | - | chr3.2:78567535-78567554 | MS.gene06554:intron | 30.0% |
| !! | AAATCACATTTCTGGTCATT+AGG | + | chr3.2:78572692-78572711 | None:intergenic | 30.0% |
| !! | ACAAGTCGATTTTGTAAGAA+TGG | + | chr3.2:78571464-78571483 | None:intergenic | 30.0% |
| !! | AGTTTTGATCCAAAATTTGC+GGG | - | chr3.2:78569427-78569446 | MS.gene06554:intron | 30.0% |
| !! | ATTTACCAATTTGTTTTCCC+AGG | - | chr3.2:78572820-78572839 | MS.gene06554:CDS | 30.0% |
| !! | CAAGTCGATTTTGTAAGAAT+GGG | + | chr3.2:78571463-78571482 | None:intergenic | 30.0% |
| !! | GTCTTCTGATAATGCTTTTA+AGG | + | chr3.2:78570303-78570322 | None:intergenic | 30.0% |
| !! | TTGCTGATTTACTGCAAAAA+TGG | - | chr3.2:78569867-78569886 | MS.gene06554:intron | 30.0% |
| !! | TTGCTTTTACATTGCTTTGT+TGG | - | chr3.2:78571686-78571705 | MS.gene06554:CDS | 30.0% |
| !! | TTTTGTGGATGCTACTTATT+TGG | - | chr3.2:78570953-78570972 | MS.gene06554:intron | 30.0% |
| !!! | ATAGACTCAGTTTTGAAGTT+TGG | + | chr3.2:78572717-78572736 | None:intergenic | 30.0% |
| !!! | CATCATTTTGGTTAATGGTA+TGG | - | chr3.2:78568871-78568890 | MS.gene06554:intron | 30.0% |
| !!! | CTTTTATTTTCTCAAGTGCT+TGG | - | chr3.2:78571720-78571739 | MS.gene06554:CDS | 30.0% |
| !!! | GTACCGATTTTTCTTTTACA+TGG | - | chr3.2:78570079-78570098 | MS.gene06554:intron | 30.0% |
| !!! | TAGACTCAGTTTTGAAGTTT+GGG | + | chr3.2:78572716-78572735 | None:intergenic | 30.0% |
| AAAACCTCTATAAGCTGACT+CGG | + | chr3.2:78571144-78571163 | None:intergenic | 35.0% | |
| AAAATAATACACCAGGACAC+TGG | + | chr3.2:78569689-78569708 | None:intergenic | 35.0% | |
| AAATAATACACCAGGACACT+GGG | + | chr3.2:78569688-78569707 | None:intergenic | 35.0% | |
| AAGAAAAATCGGTACCAAAC+TGG | + | chr3.2:78570074-78570093 | None:intergenic | 35.0% | |
| AAGTATATCAAGGATGTGGA+AGG | - | chr3.2:78569044-78569063 | MS.gene06554:intron | 35.0% | |
| AATATTGCGTTCCCAAAAGA+TGG | + | chr3.2:78568851-78568870 | None:intergenic | 35.0% | |
| AATCTGCTGAAAATCAAACC+AGG | + | chr3.2:78567416-78567435 | None:intergenic | 35.0% | |
| AATTCAAGCCCTTACAAAAC+CGG | - | chr3.2:78571239-78571258 | MS.gene06554:intron | 35.0% | |
| ACATCAGTTAAAGGGACTAA+CGG | + | chr3.2:78567358-78567377 | None:intergenic | 35.0% | |
| ATAAATAGCACTCTCTGCTT+TGG | - | chr3.2:78572665-78572684 | MS.gene06554:intron | 35.0% | |
| ATAGGGTTTGAGTGATAAAG+AGG | + | chr3.2:78568419-78568438 | None:intergenic | 35.0% | |
| ATATGATTATGTGGAAGAGC+TGG | - | chr3.2:78571804-78571823 | MS.gene06554:intron | 35.0% | |
| ATCAACAACAAGAGCGAAAA+AGG | + | chr3.2:78567463-78567482 | None:intergenic | 35.0% | |
| CAATCCAATCCAACATTTGA+AGG | + | chr3.2:78567547-78567566 | None:intergenic | 35.0% | |
| CACCACTTATAAACATTTGC+AGG | - | chr3.2:78571284-78571303 | MS.gene06554:intron | 35.0% | |
| CATGATGACACAATGCATTA+TGG | + | chr3.2:78570728-78570747 | None:intergenic | 35.0% | |
| CTAAAGGACTTGCATAGTTA+TGG | + | chr3.2:78568591-78568610 | None:intergenic | 35.0% | |
| CTATGCATTTACGAGTGTTA+TGG | - | chr3.2:78568776-78568795 | MS.gene06554:intron | 35.0% | |
| CTCTTCTCATCAATTATCAC+AGG | - | chr3.2:78570113-78570132 | MS.gene06554:CDS | 35.0% | |
| CTGCAAATGTTTATAAGTGG+TGG | + | chr3.2:78571286-78571305 | None:intergenic | 35.0% | |
| GACCTGCAAATGTTTATAAG+TGG | + | chr3.2:78571289-78571308 | None:intergenic | 35.0% | |
| GCAGATTTCTTTGTCACAAT+TGG | - | chr3.2:78568498-78568517 | MS.gene06554:intron | 35.0% | |
| GTAGTGATTCTATGGTCTAA+GGG | - | chr3.2:78568247-78568266 | MS.gene06554:CDS | 35.0% | |
| GTGATGCCATCTTAGAATTT+GGG | - | chr3.2:78571427-78571446 | MS.gene06554:CDS | 35.0% | |
| GTGTTGTCTATTCTCGATAT+TGG | - | chr3.2:78569712-78569731 | MS.gene06554:intron | 35.0% | |
| TCAAACCTGGGAAAACAAAT+TGG | + | chr3.2:78572828-78572847 | None:intergenic | 35.0% | |
| TCAAATAAGCCAATCCAAAC+AGG | - | chr3.2:78567865-78567884 | MS.gene06554:intron | 35.0% | |
| TCCATGGTCACAATATTCAT+TGG | - | chr3.2:78569796-78569815 | MS.gene06554:intron | 35.0% | |
| TGCCCAATATCTCAAAGTAA+CGG | + | chr3.2:78567652-78567671 | None:intergenic | 35.0% | |
| TGTGAGCAACAAAATGAAGT+TGG | + | chr3.2:78567624-78567643 | None:intergenic | 35.0% | |
| TGTGATGCCATCTTAGAATT+TGG | - | chr3.2:78571426-78571445 | MS.gene06554:CDS | 35.0% | |
| TGTTTATGCTACATCAGAAC+AGG | - | chr3.2:78570337-78570356 | MS.gene06554:intron | 35.0% | |
| TTAACAGTTCTTTGCCAATG+CGG | - | chr3.2:78569142-78569161 | MS.gene06554:intron | 35.0% | |
| TTGTCCTTCAAATGTTGGAT+TGG | - | chr3.2:78567540-78567559 | MS.gene06554:intron | 35.0% | |
| TTGTGGTGAGAAACAATTAC+TGG | - | chr3.2:78569767-78569786 | MS.gene06554:intron | 35.0% | |
| ! | AGCATGAGAATAGGGTATTA+GGG | - | chr3.2:78572553-78572572 | MS.gene06554:intron | 35.0% |
| ! | AGCATTTTTATGGATGGTGT+GGG | - | chr3.2:78570799-78570818 | MS.gene06554:intron | 35.0% |
| ! | ATGCTTGAATGGTTAGTTGA+GGG | + | chr3.2:78571649-78571668 | None:intergenic | 35.0% |
| ! | CAAAAGCAACACCATCTTTT+GGG | - | chr3.2:78568837-78568856 | MS.gene06554:intron | 35.0% |
| ! | CAATTACTGGTTAGTATCCA+TGG | - | chr3.2:78569780-78569799 | MS.gene06554:intron | 35.0% |
| ! | CAATTCGATTTCTGTTTTGC+AGG | - | chr3.2:78568697-78568716 | MS.gene06554:intron | 35.0% |
| ! | CTAAACTAGCTCTCCAAAAT+TGG | + | chr3.2:78568037-78568056 | None:intergenic | 35.0% |
| ! | GGATGCTACTTATTTGGTTA+CGG | - | chr3.2:78570959-78570978 | MS.gene06554:intron | 35.0% |
| ! | GGATTCGAAGGTATAACATA+GGG | + | chr3.2:78568436-78568455 | None:intergenic | 35.0% |
| ! | TACATTGCTTTGTTGGATTG+TGG | - | chr3.2:78571693-78571712 | MS.gene06554:CDS | 35.0% |
| ! | TCAAATGTTGGATTGGATTG+TGG | - | chr3.2:78567547-78567566 | MS.gene06554:intron | 35.0% |
| ! | TCTCGATATTGGTGTTTCTA+TGG | - | chr3.2:78569723-78569742 | MS.gene06554:intron | 35.0% |
| ! | TGGATTCGAAGGTATAACAT+AGG | + | chr3.2:78568437-78568456 | None:intergenic | 35.0% |
| ! | TTTGAGATATTGGGCATGTT+TGG | - | chr3.2:78567656-78567675 | MS.gene06554:intron | 35.0% |
| ! | TTTGTCATCTTTTTGTGAGG+AGG | + | chr3.2:78568661-78568680 | None:intergenic | 35.0% |
| ! | TTTTCAGCAGATTGCTAAGA+TGG | - | chr3.2:78567423-78567442 | MS.gene06554:intron | 35.0% |
| !! | AATTGATGGATTGGATTCGA+AGG | + | chr3.2:78568448-78568467 | None:intergenic | 35.0% |
| !! | CACCGTTACTTTGAGATATT+GGG | - | chr3.2:78567647-78567666 | MS.gene06554:intron | 35.0% |
| !! | CGATTTTGTAAGAATGGGTT+AGG | + | chr3.2:78571458-78571477 | None:intergenic | 35.0% |
| !! | TCATTGGCTTTCAGATACAA+TGG | - | chr3.2:78569812-78569831 | MS.gene06554:intron | 35.0% |
| !! | TGATGATGTTTTATTCCCTC+TGG | - | chr3.2:78568802-78568821 | MS.gene06554:intron | 35.0% |
| !!! | AGACTCAGTTTTGAAGTTTG+GGG | + | chr3.2:78572715-78572734 | None:intergenic | 35.0% |
| !!! | AGAGGTTTTAGAAGTAAGGA+GGG | - | chr3.2:78571155-78571174 | MS.gene06554:intron | 35.0% |
| !!! | TAGAGGTTTTAGAAGTAAGG+AGG | - | chr3.2:78571154-78571173 | MS.gene06554:intron | 35.0% |
| AAAAGAGAGAGCAAGAAGAG+CGG | + | chr3.2:78568738-78568757 | None:intergenic | 40.0% | |
| AAAGTATGTTGTGGGCAAAG+AGG | + | chr3.2:78570622-78570641 | None:intergenic | 40.0% | |
| AACCATTCAAGCATCCTACT+TGG | - | chr3.2:78571655-78571674 | MS.gene06554:intron | 40.0% | |
| AATAATACACCAGGACACTG+GGG | + | chr3.2:78569687-78569706 | None:intergenic | 40.0% | |
| ACCATTCAAGCATCCTACTT+GGG | - | chr3.2:78571656-78571675 | MS.gene06554:intron | 40.0% | |
| AGGTTGAAGGAGTTCCAATT+AGG | + | chr3.2:78571626-78571645 | None:intergenic | 40.0% | |
| AGTACATTCTCTCTCAAACC+TGG | + | chr3.2:78572841-78572860 | None:intergenic | 40.0% | |
| AGTTTCATCACCTTACAAGC+CGG | + | chr3.2:78571261-78571280 | None:intergenic | 40.0% | |
| ATCGGAAACTATCAAGAAGC+AGG | + | chr3.2:78572459-78572478 | None:intergenic | 40.0% | |
| ATTGTGTGGAGCATGAGAAT+AGG | - | chr3.2:78572544-78572563 | MS.gene06554:intron | 40.0% | |
| CAAATGCTTATCAAGGGACA+GGG | - | chr3.2:78570906-78570925 | MS.gene06554:intron | 40.0% | |
| CAAGGGTCAAATCTTAACTC+TGG | - | chr3.2:78570007-78570026 | MS.gene06554:intron | 40.0% | |
| CACCGACAACATCAGTTAAA+GGG | + | chr3.2:78567366-78567385 | None:intergenic | 40.0% | |
| CCTGACTCTTGCTTCAAATT+TGG | - | chr3.2:78571107-78571126 | MS.gene06554:intron | 40.0% | |
| CGTAGTGATTCTATGGTCTA+AGG | - | chr3.2:78568246-78568265 | MS.gene06554:CDS | 40.0% | |
| CTTCTTCACTGAGTAAAGCT+TGG | + | chr3.2:78568092-78568111 | None:intergenic | 40.0% | |
| GATACTCAACTTAGAACTGC+CGG | + | chr3.2:78571962-78571981 | None:intergenic | 40.0% | |
| GCCAATGAATATTGTGACCA+TGG | + | chr3.2:78569800-78569819 | None:intergenic | 40.0% | |
| GCCCCCTATCTGTATTAAAT+TGG | - | chr3.2:78572591-78572610 | MS.gene06554:intron | 40.0% | |
| GTACATTCTCTCTCAAACCT+GGG | + | chr3.2:78572840-78572859 | None:intergenic | 40.0% | |
| GTCCCTTTAACTGATGTTGT+CGG | - | chr3.2:78567361-78567380 | MS.gene06554:CDS | 40.0% | |
| GTGTATCAGCTGTAATGTTC+AGG | - | chr3.2:78568520-78568539 | MS.gene06554:intron | 40.0% | |
| GTTAACATCTGCAGTTGAGA+AGG | - | chr3.2:78570154-78570173 | MS.gene06554:CDS | 40.0% | |
| GTTTGGGGAAATCACATTTC+TGG | + | chr3.2:78572700-78572719 | None:intergenic | 40.0% | |
| TAACACACTTACTGACACCT+GGG | - | chr3.2:78571333-78571352 | MS.gene06554:intron | 40.0% | |
| TAACAGTTCTTTGCCAATGC+GGG | - | chr3.2:78569143-78569162 | MS.gene06554:intron | 40.0% | |
| TAGGAACATGCATCTTCTCT+TGG | + | chr3.2:78572026-78572045 | None:intergenic | 40.0% | |
| TCAAAACTGAGTCTATGGCA+TGG | - | chr3.2:78572721-78572740 | MS.gene06554:intron | 40.0% | |
| TCAAATGCTTATCAAGGGAC+AGG | - | chr3.2:78570905-78570924 | MS.gene06554:intron | 40.0% | |
| TCTAAGCTTTACTCCCACTT+GGG | - | chr3.2:78567938-78567957 | MS.gene06554:intron | 40.0% | |
| TGAGGATGCATAACAAGCAA+GGG | + | chr3.2:78572415-78572434 | None:intergenic | 40.0% | |
| TGCCATCTTAGAATTTGGGA+TGG | - | chr3.2:78571431-78571450 | MS.gene06554:CDS | 40.0% | |
| TGTGTTAAGTGTCCCACATT+GGG | + | chr3.2:78571320-78571339 | None:intergenic | 40.0% | |
| TTAACACACTTACTGACACC+TGG | - | chr3.2:78571332-78571351 | MS.gene06554:intron | 40.0% | |
| TTGTGTGGAGCATGAGAATA+GGG | - | chr3.2:78572545-78572564 | MS.gene06554:intron | 40.0% | |
| ! | AACACGGAGCATTAACATGA+TGG | + | chr3.2:78567892-78567911 | None:intergenic | 40.0% |
| ! | AATGCAAGACCCGCAAATTT+TGG | + | chr3.2:78569439-78569458 | None:intergenic | 40.0% |
| ! | ACACGGAGCATTAACATGAT+GGG | + | chr3.2:78567891-78567910 | None:intergenic | 40.0% |
| ! | ACTTGTTGATCCATCTCCAA+AGG | + | chr3.2:78572907-78572926 | None:intergenic | 40.0% |
| ! | CAGCATTTTTATGGATGGTG+TGG | - | chr3.2:78570798-78570817 | MS.gene06554:intron | 40.0% |
| ! | CAGGCTTTTTGTGAAAAGCA+AGG | + | chr3.2:78569932-78569951 | None:intergenic | 40.0% |
| ! | CATCTTTTTGTGAGGAGGAT+GGG | + | chr3.2:78568656-78568675 | None:intergenic | 40.0% |
| ! | CCAAAAGCAACACCATCTTT+TGG | - | chr3.2:78568836-78568855 | MS.gene06554:intron | 40.0% |
| ! | CCAAATTTGAAGCAAGAGTC+AGG | + | chr3.2:78571110-78571129 | None:intergenic | 40.0% |
| ! | CTTAGCTGCTGCAATGTTTT+AGG | - | chr3.2:78569594-78569613 | MS.gene06554:intron | 40.0% |
| ! | GAGCATGAGAATAGGGTATT+AGG | - | chr3.2:78572552-78572571 | MS.gene06554:intron | 40.0% |
| ! | GATGCTTGAATGGTTAGTTG+AGG | + | chr3.2:78571650-78571669 | None:intergenic | 40.0% |
| ! | GCATTTTTATGGATGGTGTG+GGG | - | chr3.2:78570800-78570819 | MS.gene06554:intron | 40.0% |
| ! | GCCATCTTAGAATTTGGGAT+GGG | - | chr3.2:78571432-78571451 | MS.gene06554:CDS | 40.0% |
| ! | TCATCTTTTTGTGAGGAGGA+TGG | + | chr3.2:78568657-78568676 | None:intergenic | 40.0% |
| ! | TGAGAATAGGGTATTAGGGA+AGG | - | chr3.2:78572557-78572576 | MS.gene06554:intron | 40.0% |
| !! | ACGTCTTTGAAACATCGACA+CGG | - | chr3.2:78571827-78571846 | MS.gene06554:intron | 40.0% |
| !! | ATTAACATGATGGGCCTGTT+TGG | + | chr3.2:78567882-78567901 | None:intergenic | 40.0% |
| !! | CTTACAAGCCGGTTTTGTAA+GGG | + | chr3.2:78571250-78571269 | None:intergenic | 40.0% |
| !! | GCACCGTTACTTTGAGATAT+TGG | - | chr3.2:78567646-78567665 | MS.gene06554:intron | 40.0% |
| !!! | AAAGATGGTGTTGCTTTTGG+CGG | + | chr3.2:78568836-78568855 | None:intergenic | 40.0% |
| !!! | CCAAAAGATGGTGTTGCTTT+TGG | + | chr3.2:78568839-78568858 | None:intergenic | 40.0% |
| AACTACTCCTAACCTGTCGA+CGG | + | chr3.2:78569908-78569927 | None:intergenic | 45.0% | |
| AAGATTTGAAGGAGGGACAC+AGG | + | chr3.2:78570548-78570567 | None:intergenic | 45.0% | |
| AAGCAAGAACTGTCCCAAGT+AGG | + | chr3.2:78571672-78571691 | None:intergenic | 45.0% | |
| ACAGCCTATCCAAGATCTGT+TGG | + | chr3.2:78571409-78571428 | None:intergenic | 45.0% | |
| ACTTGGGGTCCATTATTGGT+TGG | - | chr3.2:78569207-78569226 | MS.gene06554:intron | 45.0% | |
| ACTTGGTCAACCTTCTTCTC+CGG | - | chr3.2:78569173-78569192 | MS.gene06554:intron | 45.0% | |
| AGCTCTCCAAAATTGGCATC+CGG | + | chr3.2:78568030-78568049 | None:intergenic | 45.0% | |
| AGGTCATATCTCACCCAATG+TGG | - | chr3.2:78571304-78571323 | MS.gene06554:intron | 45.0% | |
| ATAACTTCCGTCGACAGGTT+AGG | - | chr3.2:78569898-78569917 | MS.gene06554:intron | 45.0% | |
| ATCAAACCTGAGACCTTGAG+AGG | + | chr3.2:78568003-78568022 | None:intergenic | 45.0% | |
| ATGCAATTGTCCGGAGAAGA+AGG | + | chr3.2:78569186-78569205 | None:intergenic | 45.0% | |
| CAAGAAACATACTGCGCTGA+AGG | - | chr3.2:78568557-78568576 | MS.gene06554:intron | 45.0% | |
| CAGCCGAAGTAGAAACTTAG+AGG | + | chr3.2:78568314-78568333 | None:intergenic | 45.0% | |
| CAGCCTATCCAAGATCTGTT+GGG | + | chr3.2:78571408-78571427 | None:intergenic | 45.0% | |
| CATCACTTGGGGTCCATTAT+TGG | - | chr3.2:78569203-78569222 | MS.gene06554:intron | 45.0% | |
| CCACCGACAACATCAGTTAA+AGG | + | chr3.2:78567367-78567386 | None:intergenic | 45.0% | |
| CCTTTAACTGATGTTGTCGG+TGG | - | chr3.2:78567364-78567383 | MS.gene06554:CDS | 45.0% | |
| CTCTAAGCTTTACTCCCACT+TGG | - | chr3.2:78567937-78567956 | MS.gene06554:intron | 45.0% | |
| CTGAGGATGCATAACAAGCA+AGG | + | chr3.2:78572416-78572435 | None:intergenic | 45.0% | |
| GAAGATGCATGTTCCTATCC+TGG | - | chr3.2:78572029-78572048 | MS.gene06554:intron | 45.0% | |
| GATTCTATGGTCTAAGGGCA+TGG | - | chr3.2:78568252-78568271 | MS.gene06554:intron | 45.0% | |
| GGCTTTCAGATACAATGGTG+CGG | - | chr3.2:78569817-78569836 | MS.gene06554:intron | 45.0% | |
| GGTCATATCTCACCCAATGT+GGG | - | chr3.2:78571305-78571324 | MS.gene06554:intron | 45.0% | |
| GTAAGGAGGGAAGATCTTTG+TGG | - | chr3.2:78571168-78571187 | MS.gene06554:intron | 45.0% | |
| GTCTTCATCCCTCCTTGATA+AGG | - | chr3.2:78568170-78568189 | MS.gene06554:CDS | 45.0% | |
| GTGTGTTAAGTGTCCCACAT+TGG | + | chr3.2:78571321-78571340 | None:intergenic | 45.0% | |
| GTTACTCTTGTATGCCATGC+AGG | - | chr3.2:78569354-78569373 | MS.gene06554:intron | 45.0% | |
| TAACCTGTCGACGGAAGTTA+TGG | + | chr3.2:78569899-78569918 | None:intergenic | 45.0% | |
| TCCCAAGTAGGATGCTTGAA+TGG | + | chr3.2:78571660-78571679 | None:intergenic | 45.0% | |
| TCCGGACAATTGCATCACTT+GGG | - | chr3.2:78569191-78569210 | MS.gene06554:intron | 45.0% | |
| TGAGAGAGAATGTACTTGCC+CGG | - | chr3.2:78572845-78572864 | MS.gene06554:CDS | 45.0% | |
| TGCCATGCAGGAAACAATGA+CGG | - | chr3.2:78569366-78569385 | MS.gene06554:intron | 45.0% | |
| TTCCGTCATTGTTTCCTGCA+TGG | + | chr3.2:78569371-78569390 | None:intergenic | 45.0% | |
| ! | ATTAGGGAAGGAGGTATGCA+TGG | - | chr3.2:78572569-78572588 | MS.gene06554:intron | 45.0% |
| ! | ATTCTCCCGGATGCCAATTT+TGG | - | chr3.2:78568021-78568040 | MS.gene06554:intron | 45.0% |
| ! | CTTGAATGGTTAGTTGAGGG+AGG | + | chr3.2:78571646-78571665 | None:intergenic | 45.0% |
| ! | GAATAGGGTATTAGGGAAGG+AGG | - | chr3.2:78572560-78572579 | MS.gene06554:intron | 45.0% |
| ! | GCCCATCCCAAATTCTAAGA+TGG | + | chr3.2:78571436-78571455 | None:intergenic | 45.0% |
| !! | CCTTACAAAACCGGCTTGTA+AGG | - | chr3.2:78571248-78571267 | MS.gene06554:intron | 45.0% |
| !! | CCTTACAAGCCGGTTTTGTA+AGG | + | chr3.2:78571251-78571270 | None:intergenic | 45.0% |
| !!! | ACAGCTTCTCCACTTTTTCC+TGG | - | chr3.2:78567395-78567414 | MS.gene06554:CDS | 45.0% |
| !!! | TGTTGCTTTTGGCGGAAACA+TGG | + | chr3.2:78568828-78568847 | None:intergenic | 45.0% |
| !!! | TGTTTTGATACGCCGTCACA+TGG | - | chr3.2:78567483-78567502 | MS.gene06554:intron | 45.0% |
| AATCGGTACCAAACTGGTGC+TGG | + | chr3.2:78570068-78570087 | None:intergenic | 50.0% | |
| ACTACCAATGTCCTGCACAC+CGG | + | chr3.2:78572867-78572886 | None:intergenic | 50.0% | |
| ACTTACTGACACCTGGGACT+GGG | - | chr3.2:78571339-78571358 | MS.gene06554:intron | 50.0% | |
| AGATACAATGGTGCGGCAAG+TGG | - | chr3.2:78569824-78569843 | MS.gene06554:intron | 50.0% | |
| AGCGATGACCTGATAGCATG+TGG | - | chr3.2:78571382-78571401 | MS.gene06554:CDS | 50.0% | |
| AGCTTTACTCCCACTTGGGT+TGG | - | chr3.2:78567942-78567961 | MS.gene06554:intron | 50.0% | |
| AGTTCTTTGCCAATGCGGGT+TGG | - | chr3.2:78569147-78569166 | MS.gene06554:intron | 50.0% | |
| CCCCAAGTGATGCAATTGTC+CGG | + | chr3.2:78569195-78569214 | None:intergenic | 50.0% | |
| CCGGACAATTGCATCACTTG+GGG | - | chr3.2:78569192-78569211 | MS.gene06554:intron | 50.0% | |
| CTCCGGACAATTGCATCACT+TGG | - | chr3.2:78569190-78569209 | MS.gene06554:intron | 50.0% | |
| CTTTCTTGCCAGCACCAGTT+TGG | - | chr3.2:78570057-78570076 | MS.gene06554:intron | 50.0% | |
| GCTATTGTGTGCGCTGTTGA+TGG | - | chr3.2:78569297-78569316 | MS.gene06554:intron | 50.0% | |
| GCTCTCCAAAATTGGCATCC+GGG | + | chr3.2:78568029-78568048 | None:intergenic | 50.0% | |
| GGGGATATGCCCTATACTGA+AGG | + | chr3.2:78572213-78572232 | None:intergenic | 50.0% | |
| GGTCTCAGGTTTGATTCTCC+CGG | - | chr3.2:78568008-78568027 | MS.gene06554:intron | 50.0% | |
| GGTTGGACGCCTTCAGTATA+GGG | - | chr3.2:78572201-78572220 | MS.gene06554:intron | 50.0% | |
| TAAATGCAGGTACGTGCTGC+TGG | - | chr3.2:78571982-78572001 | MS.gene06554:intron | 50.0% | |
| TCAAGGGACAGGGAAACGTA+AGG | - | chr3.2:78570916-78570935 | MS.gene06554:intron | 50.0% | |
| TCTGCCGAGTCAGCTTATAG+AGG | - | chr3.2:78571137-78571156 | MS.gene06554:intron | 50.0% | |
| TGGCCCAACAGATCTTGGAT+AGG | - | chr3.2:78571402-78571421 | MS.gene06554:CDS | 50.0% | |
| TGGTAGTACCTGCTCATCTG+CGG | - | chr3.2:78572880-78572899 | MS.gene06554:CDS | 50.0% | |
| TTATGGATGGTGTGGGGACT+GGG | - | chr3.2:78570806-78570825 | MS.gene06554:intron | 50.0% | |
| TTTATGGATGGTGTGGGGAC+TGG | - | chr3.2:78570805-78570824 | MS.gene06554:intron | 50.0% | |
| ! | GCGAGGAGTGTGTATCTGAA+TGG | - | chr3.2:78572073-78572092 | MS.gene06554:intron | 50.0% |
| ! | GGTTAGTTGAGGGAGGTTGA+AGG | + | chr3.2:78571639-78571658 | None:intergenic | 50.0% |
| !! | CATGATGGGCCTGTTTGGAT+TGG | + | chr3.2:78567877-78567896 | None:intergenic | 50.0% |
| AATGGTGCGGCAAGTGGCAA+TGG | - | chr3.2:78569830-78569849 | MS.gene06554:intron | 55.0% | |
| AATGTACTTGCCCGGTGTGC+AGG | - | chr3.2:78572853-78572872 | MS.gene06554:CDS | 55.0% | |
| ACATGTGTCCACAGCGAACC+AGG | + | chr3.2:78572050-78572069 | None:intergenic | 55.0% | |
| ACGCCATAACTTCCGTCGAC+AGG | - | chr3.2:78569893-78569912 | MS.gene06554:intron | 55.0% | |
| ATACACCAGGACACTGGGGA+TGG | + | chr3.2:78569683-78569702 | None:intergenic | 55.0% | |
| CACTTACTGACACCTGGGAC+TGG | - | chr3.2:78571338-78571357 | MS.gene06554:intron | 55.0% | |
| CCAAGTAAGCCAACCCGCAT+TGG | + | chr3.2:78569159-78569178 | None:intergenic | 55.0% | |
| CTACCAATGTCCTGCACACC+GGG | + | chr3.2:78572866-78572885 | None:intergenic | 55.0% | |
| CTGTGGACACATGTTCTGCG+AGG | - | chr3.2:78572056-78572075 | MS.gene06554:intron | 55.0% | |
| CTGTTGGGCCACATGCTATC+AGG | + | chr3.2:78571393-78571412 | None:intergenic | 55.0% | |
| CTTGGAGTGTGCTCCTCTCA+AGG | - | chr3.2:78567987-78568006 | MS.gene06554:intron | 55.0% | |
| GCATGTGGCCCAACAGATCT+TGG | - | chr3.2:78571397-78571416 | MS.gene06554:CDS | 55.0% | |
| GCGTTTGTGTAAGCTCGCAC+AGG | - | chr3.2:78567726-78567745 | MS.gene06554:intron | 55.0% | |
| GGGTTGGACGCCTTCAGTAT+AGG | - | chr3.2:78572200-78572219 | MS.gene06554:intron | 55.0% | |
| TACACCAGGACACTGGGGAT+GGG | + | chr3.2:78569682-78569701 | None:intergenic | 55.0% | |
| TGTCCACAGCGAACCAGGAT+AGG | + | chr3.2:78572045-78572064 | None:intergenic | 55.0% | |
| TGTGCTCCTCTCAAGGTCTC+AGG | - | chr3.2:78567994-78568013 | MS.gene06554:intron | 55.0% | |
| TTGGCGGAAACATGGCCAGA+GGG | + | chr3.2:78568820-78568839 | None:intergenic | 55.0% | |
| TTTGGCGGAAACATGGCCAG+AGG | + | chr3.2:78568821-78568840 | None:intergenic | 55.0% | |
| ! | AGAGGCTCACCGTGCTATTG+CGG | - | chr3.2:78567321-78567340 | MS.gene06554:CDS | 55.0% |
| ! | CATCTGCGGACCTTTGGAGA+TGG | - | chr3.2:78572894-78572913 | MS.gene06554:CDS | 55.0% |
| ! | CTTGAGAGGAGCACACTCCA+AGG | + | chr3.2:78567989-78568008 | None:intergenic | 55.0% |
| ! | GTTCCTATCCTGGTTCGCTG+TGG | - | chr3.2:78572039-78572058 | MS.gene06554:intron | 55.0% |
| !! | CCAATGCGGGTTGGCTTACT+TGG | - | chr3.2:78569156-78569175 | MS.gene06554:intron | 55.0% |
| !! | GTGGTATTGGCTTGGGACCT+TGG | - | chr3.2:78567969-78567988 | MS.gene06554:intron | 55.0% |
| !! | TGGCCTGGTGGTATTGGCTT+GGG | - | chr3.2:78567962-78567981 | MS.gene06554:intron | 55.0% |
| !! | TTGGCCTGGTGGTATTGGCT+TGG | - | chr3.2:78567961-78567980 | MS.gene06554:intron | 55.0% |
| !! | TTGGGTTGGCCTGGTGGTAT+TGG | - | chr3.2:78567956-78567975 | MS.gene06554:intron | 55.0% |
| ACCACCAGGCCAACCCAAGT+GGG | + | chr3.2:78567954-78567973 | None:intergenic | 60.0% | |
| CCAAAGGTCCGCAGATGAGC+AGG | + | chr3.2:78572891-78572910 | None:intergenic | 60.0% | |
| CCTGCTCATCTGCGGACCTT+TGG | - | chr3.2:78572888-78572907 | MS.gene06554:CDS | 60.0% | |
| CTCTGTCCGCCGCAATAGCA+CGG | + | chr3.2:78567333-78567352 | None:intergenic | 60.0% | |
| GATGGTGTGGGGACTGGGAA+GGG | - | chr3.2:78570811-78570830 | MS.gene06554:intron | 60.0% | |
| GGTCCCAAGCCAATACCACC+AGG | + | chr3.2:78567968-78567987 | None:intergenic | 60.0% | |
| TACCACCAGGCCAACCCAAG+TGG | + | chr3.2:78567955-78567974 | None:intergenic | 60.0% | |
| TCTTCCCATCCCCAGTGTCC+TGG | - | chr3.2:78569675-78569694 | MS.gene06554:intron | 60.0% | |
| TTGCCCGGTGTGCAGGACAT+TGG | - | chr3.2:78572860-78572879 | MS.gene06554:CDS | 60.0% | |
| !! | TACTCCCACTTGGGTTGGCC+TGG | - | chr3.2:78567947-78567966 | MS.gene06554:intron | 60.0% |
| GACACCTGGGACTGGGCATC+TGG | - | chr3.2:78571346-78571365 | MS.gene06554:intron | 65.0% | |
| GGATGGTGTGGGGACTGGGA+AGG | - | chr3.2:78570810-78570829 | MS.gene06554:intron | 65.0% | |
| ! | GGCTCACCGTGCTATTGCGG+CGG | - | chr3.2:78567324-78567343 | MS.gene06554:CDS | 65.0% |
| !! | TCCCACTTGGGTTGGCCTGG+TGG | - | chr3.2:78567950-78567969 | MS.gene06554:intron | 65.0% |
| CGCACCAGATGCCCAGTCCC+AGG | + | chr3.2:78571353-78571372 | None:intergenic | 70.0% | |
| GGGACTGGGCATCTGGTGCG+TGG | - | chr3.2:78571353-78571372 | MS.gene06554:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 78567310 | 78572947 | 78567310 | ID=MS.gene06554 |
| chr3.2 | mRNA | 78567310 | 78572947 | 78567310 | ID=MS.gene06554.t1;Parent=MS.gene06554 |
| chr3.2 | exon | 78572749 | 78572947 | 78572749 | ID=MS.gene06554.t1.exon1;Parent=MS.gene06554.t1 |
| chr3.2 | CDS | 78572749 | 78572947 | 78572749 | ID=cds.MS.gene06554.t1;Parent=MS.gene06554.t1 |
| chr3.2 | exon | 78571679 | 78571755 | 78571679 | ID=MS.gene06554.t1.exon2;Parent=MS.gene06554.t1 |
| chr3.2 | CDS | 78571679 | 78571755 | 78571679 | ID=cds.MS.gene06554.t1;Parent=MS.gene06554.t1 |
| chr3.2 | exon | 78571370 | 78571538 | 78571370 | ID=MS.gene06554.t1.exon3;Parent=MS.gene06554.t1 |
| chr3.2 | CDS | 78571370 | 78571538 | 78571370 | ID=cds.MS.gene06554.t1;Parent=MS.gene06554.t1 |
| chr3.2 | exon | 78570343 | 78570431 | 78570343 | ID=MS.gene06554.t1.exon4;Parent=MS.gene06554.t1 |
| chr3.2 | CDS | 78570343 | 78570431 | 78570343 | ID=cds.MS.gene06554.t1;Parent=MS.gene06554.t1 |
| chr3.2 | exon | 78570082 | 78570246 | 78570082 | ID=MS.gene06554.t1.exon5;Parent=MS.gene06554.t1 |
| chr3.2 | CDS | 78570082 | 78570246 | 78570082 | ID=cds.MS.gene06554.t1;Parent=MS.gene06554.t1 |
| chr3.2 | exon | 78569899 | 78569976 | 78569899 | ID=MS.gene06554.t1.exon6;Parent=MS.gene06554.t1 |
| chr3.2 | CDS | 78569899 | 78569976 | 78569899 | ID=cds.MS.gene06554.t1;Parent=MS.gene06554.t1 |
| chr3.2 | exon | 78568163 | 78568266 | 78568163 | ID=MS.gene06554.t1.exon7;Parent=MS.gene06554.t1 |
| chr3.2 | CDS | 78568163 | 78568266 | 78568163 | ID=cds.MS.gene06554.t1;Parent=MS.gene06554.t1 |
| chr3.2 | exon | 78567310 | 78567415 | 78567310 | ID=MS.gene06554.t1.exon8;Parent=MS.gene06554.t1 |
| chr3.2 | CDS | 78567310 | 78567415 | 78567310 | ID=cds.MS.gene06554.t1;Parent=MS.gene06554.t1 |
| Gene Sequence |
| Protein sequence |
