Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049545.t1 | XP_013460447.1 | 85.1 | 377 | 50 | 2 | 1 | 371 | 1 | 377 | 3.00E-147 | 531.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049545.t1 | Q6S4P4 | 43.6 | 346 | 156 | 8 | 34 | 371 | 15 | 329 | 2.2e-58 | 227.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049545.t1 | A0A072V8H4 | 85.1 | 377 | 50 | 2 | 1 | 371 | 1 | 377 | 2.2e-147 | 531.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene049545.t1 | TF | bZIP |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049545 | MS.gene41497 | 0.846247 | 2.45E-59 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049545.t1 | MTR_3g467120 | 96.021 | 377 | 9 | 2 | 1 | 371 | 1 | 377 | 0.0 | 746 |
| MS.gene049545.t1 | MTR_5g075390 | 71.893 | 338 | 67 | 6 | 34 | 371 | 49 | 358 | 6.16e-169 | 476 |
| MS.gene049545.t1 | MTR_3g094020 | 47.093 | 344 | 135 | 11 | 36 | 371 | 7 | 311 | 6.92e-88 | 268 |
| MS.gene049545.t1 | MTR_2g099050 | 52.672 | 262 | 88 | 8 | 36 | 272 | 72 | 322 | 1.22e-69 | 225 |
| MS.gene049545.t1 | MTR_6g034945 | 46.595 | 279 | 117 | 14 | 34 | 303 | 26 | 281 | 1.86e-54 | 182 |
| MS.gene049545.t1 | MTR_4g072090 | 38.782 | 312 | 115 | 5 | 32 | 268 | 147 | 457 | 1.41e-51 | 179 |
| MS.gene049545.t1 | MTR_4g072090 | 36.610 | 295 | 111 | 5 | 32 | 251 | 147 | 440 | 4.04e-43 | 155 |
| MS.gene049545.t1 | MTR_1g023690 | 39.615 | 260 | 98 | 6 | 63 | 263 | 220 | 479 | 1.59e-30 | 122 |
| MS.gene049545.t1 | MTR_2g090900 | 47.312 | 93 | 49 | 0 | 171 | 263 | 191 | 283 | 3.66e-19 | 87.4 |
| MS.gene049545.t1 | MTR_2g090900 | 47.312 | 93 | 49 | 0 | 171 | 263 | 191 | 283 | 4.13e-19 | 87.8 |
| MS.gene049545.t1 | MTR_1g099030 | 34.969 | 163 | 92 | 3 | 106 | 268 | 73 | 221 | 4.50e-19 | 86.7 |
| MS.gene049545.t1 | MTR_4g079500 | 41.379 | 116 | 57 | 1 | 171 | 275 | 194 | 309 | 1.79e-18 | 85.9 |
| MS.gene049545.t1 | MTR_8g088650 | 41.935 | 93 | 49 | 1 | 171 | 263 | 234 | 321 | 1.57e-11 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049545.t1 | AT2G40620 | 47.525 | 404 | 138 | 14 | 5 | 371 | 1 | 367 | 5.47e-99 | 298 |
| MS.gene049545.t1 | AT1G06850 | 64.455 | 211 | 64 | 3 | 150 | 360 | 127 | 326 | 6.41e-85 | 261 |
| MS.gene049545.t1 | AT2G31370 | 49.446 | 271 | 112 | 9 | 36 | 289 | 58 | 320 | 1.07e-66 | 216 |
| MS.gene049545.t1 | AT2G31370 | 50.000 | 272 | 109 | 10 | 36 | 289 | 58 | 320 | 2.24e-66 | 215 |
| MS.gene049545.t1 | AT2G31370 | 50.000 | 272 | 109 | 10 | 36 | 289 | 58 | 320 | 2.24e-66 | 215 |
| MS.gene049545.t1 | AT2G31370 | 50.000 | 272 | 109 | 10 | 36 | 289 | 58 | 320 | 2.24e-66 | 215 |
| MS.gene049545.t1 | AT2G31370 | 50.000 | 272 | 109 | 10 | 36 | 289 | 58 | 320 | 2.24e-66 | 215 |
| MS.gene049545.t1 | AT2G31370 | 50.000 | 272 | 109 | 10 | 36 | 289 | 58 | 320 | 2.24e-66 | 215 |
| MS.gene049545.t1 | AT2G31370 | 50.000 | 272 | 109 | 10 | 36 | 289 | 58 | 320 | 2.24e-66 | 215 |
| MS.gene049545.t1 | AT1G06070 | 51.779 | 253 | 106 | 7 | 36 | 279 | 73 | 318 | 1.30e-62 | 206 |
| MS.gene049545.t1 | AT4G38900 | 39.889 | 361 | 115 | 14 | 16 | 278 | 146 | 502 | 2.33e-50 | 177 |
| MS.gene049545.t1 | AT4G38900 | 39.889 | 361 | 115 | 14 | 16 | 278 | 146 | 502 | 2.33e-50 | 177 |
| MS.gene049545.t1 | AT4G38900 | 39.237 | 367 | 115 | 15 | 16 | 278 | 146 | 508 | 6.83e-48 | 171 |
| MS.gene049545.t1 | AT1G43700 | 55.294 | 170 | 65 | 3 | 133 | 291 | 146 | 315 | 8.59e-45 | 157 |
| MS.gene049545.t1 | AT2G21230 | 67.826 | 115 | 37 | 0 | 154 | 268 | 353 | 467 | 2.09e-42 | 155 |
| MS.gene049545.t1 | AT2G21230 | 67.826 | 115 | 37 | 0 | 154 | 268 | 353 | 467 | 2.09e-42 | 155 |
| MS.gene049545.t1 | AT1G06850 | 87.500 | 80 | 10 | 0 | 150 | 229 | 127 | 206 | 3.04e-41 | 145 |
| MS.gene049545.t1 | AT2G21230 | 63.636 | 121 | 38 | 1 | 154 | 268 | 353 | 473 | 2.21e-39 | 147 |
| MS.gene049545.t1 | AT2G21230 | 68.687 | 99 | 31 | 0 | 154 | 252 | 353 | 451 | 3.68e-36 | 137 |
| MS.gene049545.t1 | AT2G12900 | 41.346 | 104 | 60 | 1 | 163 | 266 | 109 | 211 | 3.32e-20 | 89.7 |
| MS.gene049545.t1 | AT2G42380 | 45.745 | 94 | 51 | 0 | 170 | 263 | 185 | 278 | 1.81e-19 | 88.6 |
| MS.gene049545.t1 | AT3G58120 | 46.237 | 93 | 50 | 0 | 171 | 263 | 202 | 294 | 1.86e-19 | 88.6 |
| MS.gene049545.t1 | AT2G13150 | 41.584 | 101 | 58 | 1 | 163 | 263 | 142 | 241 | 2.27e-17 | 81.6 |
| MS.gene049545.t1 | AT2G12940 | 39.423 | 104 | 62 | 1 | 162 | 265 | 140 | 242 | 6.26e-17 | 80.9 |
| MS.gene049545.t1 | AT2G42380 | 45.238 | 84 | 46 | 0 | 169 | 252 | 184 | 267 | 1.63e-16 | 79.3 |
| MS.gene049545.t1 | AT2G21235 | 34.028 | 144 | 63 | 2 | 171 | 282 | 359 | 502 | 2.28e-16 | 80.9 |
| MS.gene049545.t1 | AT3G58120 | 46.835 | 79 | 42 | 0 | 171 | 249 | 202 | 280 | 1.73e-15 | 76.6 |
| MS.gene049545.t1 | AT2G42380 | 40.426 | 94 | 45 | 1 | 170 | 263 | 185 | 267 | 4.88e-13 | 69.7 |
| MS.gene049545.t1 | AT1G58110 | 44.048 | 84 | 47 | 0 | 180 | 263 | 238 | 321 | 4.35e-12 | 67.4 |
| MS.gene049545.t1 | AT1G58110 | 44.048 | 84 | 47 | 0 | 180 | 263 | 238 | 321 | 4.35e-12 | 67.4 |
Find 125 sgRNAs with CRISPR-Local
Find 181 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCCTCTGAATCTTATAATA+TGG | 0.191240 | 3.2:-57793897 | MS.gene049545:CDS |
| AACATACAATTTCCCCAATT+TGG | 0.232116 | 3.2:-57793800 | MS.gene049545:CDS |
| GGAGGATCCGCCGCCGGTTA+AGG | 0.280693 | 3.2:+57796239 | None:intergenic |
| CAAAGCTCAGCGAGTTTATC+AGG | 0.287151 | 3.2:+57795934 | None:intergenic |
| CCGTCTCCCCGACGACATTA+TGG | 0.308655 | 3.2:-57796280 | MS.gene049545:CDS |
| TGATCAGCTCGGTCGTTTGC+AGG | 0.330105 | 3.2:-57793702 | MS.gene049545:CDS |
| AGCTGAGATTTGGTGAGAAT+TGG | 0.342600 | 3.2:+57793736 | None:intergenic |
| AGATGGGGAGTGACCAAATT+GGG | 0.344045 | 3.2:+57793787 | None:intergenic |
| GTTTGTTGCAACTGATAATT+CGG | 0.347347 | 3.2:+57793758 | None:intergenic |
| CAGATGGGGAGTGACCAAAT+TGG | 0.358510 | 3.2:+57793786 | None:intergenic |
| GTCGTTATTCCCACTGGTTC+CGG | 0.359162 | 3.2:+57796083 | None:intergenic |
| TACGGTAATTGCGCCGGTGC+CGG | 0.364427 | 3.2:-57796108 | MS.gene049545:CDS |
| TTTGCAACATAGCTGAGATT+TGG | 0.368300 | 3.2:+57793726 | None:intergenic |
| GGGTTCGCCGGCGACGGTGG+TGG | 0.376326 | 3.2:+57796341 | None:intergenic |
| AATTCGAATCAAACCGGTTA+CGG | 0.381710 | 3.2:-57796126 | MS.gene049545:CDS |
| CCACAACATTCAGGTCCTTC+AGG | 0.383951 | 3.2:-57793830 | MS.gene049545:CDS |
| TGACCTGGTATAATGTCAAT+TGG | 0.386653 | 3.2:+57794835 | None:intergenic |
| CCCTCTGAATCTTATAATAT+GGG | 0.390160 | 3.2:-57793896 | MS.gene049545:CDS |
| ACCGGCGCAATTACCGTAAC+CGG | 0.395391 | 3.2:+57796113 | None:intergenic |
| ACTTCGACGACGAATATGTT+TGG | 0.402900 | 3.2:-57795988 | MS.gene049545:CDS |
| GGGGAGACGGTAGTTGATTT+CGG | 0.404834 | 3.2:+57796293 | None:intergenic |
| TCCCCTTCCGATCCCTTAAC+CGG | 0.405073 | 3.2:-57796252 | MS.gene049545:CDS |
| AGACATAGCTGCTCTGTTGA+TGG | 0.408343 | 3.2:-57796015 | MS.gene049545:CDS |
| ATGCACCAGATGCAATTTGC+AGG | 0.409287 | 3.2:-57793872 | MS.gene049545:CDS |
| CTCTCCGTCGTTATTCCCAC+TGG | 0.410355 | 3.2:+57796077 | None:intergenic |
| GAGGATCCGCCGCCGGTTAA+GGG | 0.411594 | 3.2:+57796240 | None:intergenic |
| CGTTGATGAAGGAAGTTGAT+AGG | 0.413861 | 3.2:-57793949 | MS.gene049545:CDS |
| CTGATAAACTCGCTGAGCTT+TGG | 0.417393 | 3.2:-57795933 | MS.gene049545:CDS |
| ACTGGTTCCGGCGCCGGCAC+CGG | 0.418458 | 3.2:+57796095 | None:intergenic |
| ATTCCCACTGGTTCCGGCGC+CGG | 0.427195 | 3.2:+57796089 | None:intergenic |
| CTCGTCGAGGCTAGCGGTGG+AGG | 0.435014 | 3.2:+57796221 | None:intergenic |
| CTATGTCTATGCCTCGTTCT+CGG | 0.435904 | 3.2:+57796030 | None:intergenic |
| TTGAACGCGCAGCAGATTGC+CGG | 0.443274 | 3.2:+57794937 | None:intergenic |
| TGATAATTCGGCACGTCAGA+TGG | 0.444587 | 3.2:+57793770 | None:intergenic |
| GGCGCGACGGTGGTGAGAGT+GGG | 0.450968 | 3.2:+57796320 | None:intergenic |
| GAGTTGTAGCCTCTGTTTGA+AGG | 0.453582 | 3.2:+57794865 | None:intergenic |
| AGAGTGGGGTTCGCCGGCGA+CGG | 0.455624 | 3.2:+57796335 | None:intergenic |
| TTCATTCGCGGCAGCGTCAA+CGG | 0.456932 | 3.2:-57796369 | MS.gene049545:CDS |
| AATTGCGCCGGTGCCGGCGC+CGG | 0.458069 | 3.2:-57796102 | MS.gene049545:CDS |
| GGGCGCGACGGTGGTGAGAG+TGG | 0.474328 | 3.2:+57796319 | None:intergenic |
| GAAAGGTCCATAATGTCGTC+GGG | 0.474927 | 3.2:+57796273 | None:intergenic |
| TCTGCAATCCATGGAACAAC+AGG | 0.475201 | 3.2:-57794203 | MS.gene049545:CDS |
| TTGATCCAAAACGTGCTAAG+AGG | 0.475774 | 3.2:-57795906 | MS.gene049545:intron |
| ACTCTCACTTGCAGAGATTG+AGG | 0.477229 | 3.2:+57793631 | None:intergenic |
| GATCAGCTCGGTCGTTTGCA+GGG | 0.478316 | 3.2:-57793701 | MS.gene049545:CDS |
| TTGACCCTGCAAATTGCATC+TGG | 0.487667 | 3.2:+57793867 | None:intergenic |
| ATTGGGGAAATTGTATGTTC+TGG | 0.495354 | 3.2:+57793804 | None:intergenic |
| GACGTTGGAAGAAGGTGCAT+TGG | 0.495650 | 3.2:+57796392 | None:intergenic |
| CTCTCACTTGCAGAGATTGA+GGG | 0.496216 | 3.2:+57793632 | None:intergenic |
| GAATATGTTTGGAGAGATCA+TGG | 0.496464 | 3.2:-57795977 | MS.gene049545:CDS |
| CCATAATGTCGTCGGGGAGA+CGG | 0.497730 | 3.2:+57796280 | None:intergenic |
| ACGTTGGAAGAAGGTGCATT+GGG | 0.501336 | 3.2:+57796393 | None:intergenic |
| GATAGGCTTAAGATTGCTAC+CGG | 0.505157 | 3.2:-57793932 | MS.gene049545:CDS |
| GCCGGTTAAGGGATCGGAAG+GGG | 0.507894 | 3.2:+57796251 | None:intergenic |
| ACGGTAGTTGATTTCGGAGT+GGG | 0.509526 | 3.2:+57796299 | None:intergenic |
| CAAGCTCCGTCTGCAATCCA+TGG | 0.511411 | 3.2:-57794212 | MS.gene049545:CDS |
| CGAATGAAGACGTTGGAAGA+AGG | 0.511752 | 3.2:+57796384 | None:intergenic |
| GGTGCCGGCGCCGGAACCAG+TGG | 0.511981 | 3.2:-57796093 | MS.gene049545:CDS |
| TTCAAGCTCTTGTATATAGC+GGG | 0.514078 | 3.2:+57794902 | None:intergenic |
| TACATTGACGTCGAGAAGCT+CGG | 0.518334 | 3.2:-57796168 | MS.gene049545:CDS |
| TCCGATCCCTTAACCGGCGG+CGG | 0.520683 | 3.2:-57796246 | MS.gene049545:CDS |
| TCTTCCAACGTCTTCATTCG+CGG | 0.520953 | 3.2:-57796381 | MS.gene049545:CDS |
| GGTGAAGAAGAGATCGTCTT+CGG | 0.522787 | 3.2:+57796191 | None:intergenic |
| GACCTGGTATAATGTCAATT+GGG | 0.526658 | 3.2:+57794836 | None:intergenic |
| GATAATTCGGCACGTCAGAT+GGG | 0.528159 | 3.2:+57793771 | None:intergenic |
| GTGGGGTTCGCCGGCGACGG+TGG | 0.529051 | 3.2:+57796338 | None:intergenic |
| GGCGTCTCCACCACCGTCGC+CGG | 0.529586 | 3.2:-57796348 | MS.gene049545:CDS |
| AAGGTGTGCCTGTTGTTCCA+TGG | 0.533755 | 3.2:+57794195 | None:intergenic |
| AGAGGGGTTCATTGCCTCCC+CGG | 0.534741 | 3.2:+57793913 | None:intergenic |
| GAGCTTCTCGACGTCAATGT+AGG | 0.534935 | 3.2:+57796170 | None:intergenic |
| GGTTCGAATTCGAATCAAAC+CGG | 0.537324 | 3.2:-57796132 | MS.gene049545:CDS |
| AATAACGACGGAGAGAAGAG+TGG | 0.537621 | 3.2:-57796069 | MS.gene049545:CDS |
| TCCGCCGCCGGTTAAGGGAT+CGG | 0.540686 | 3.2:+57796245 | None:intergenic |
| ACCGCTAGCCTCGACGAGAT+CGG | 0.544429 | 3.2:-57796216 | MS.gene049545:CDS |
| TGTGCAGAATACTTGCAAAC+CGG | 0.544736 | 3.2:-57794956 | MS.gene049545:intron |
| TCTTAATGATGCGTTGATGA+AGG | 0.548957 | 3.2:-57793960 | MS.gene049545:CDS |
| CCCATATTATAAGATTCAGA+GGG | 0.552973 | 3.2:+57793896 | None:intergenic |
| ATCAGCTCGGTCGTTTGCAG+GGG | 0.553567 | 3.2:-57793700 | MS.gene049545:CDS |
| TCCCATATTATAAGATTCAG+AGG | 0.556236 | 3.2:+57793895 | None:intergenic |
| TGCGCGTTCAAAAGAGAGAA+AGG | 0.557307 | 3.2:-57794925 | MS.gene049545:CDS |
| TTAAGGGATCGGAAGGGGAA+AGG | 0.559188 | 3.2:+57796256 | None:intergenic |
| GTGGTGAGAGTGGGGTTCGC+CGG | 0.559617 | 3.2:+57796329 | None:intergenic |
| AGTTGTAGCCTCTGTTTGAA+GGG | 0.560730 | 3.2:+57794866 | None:intergenic |
| TGCCCAATTGACATTATACC+AGG | 0.573298 | 3.2:-57794838 | MS.gene049545:intron |
| AGCGGTGGAGGATCCGCCGC+CGG | 0.574294 | 3.2:+57796233 | None:intergenic |
| TTTCGGAGTGGGCGCGACGG+TGG | 0.577554 | 3.2:+57796310 | None:intergenic |
| CCGCCGGTTAAGGGATCGGA+AGG | 0.578667 | 3.2:+57796249 | None:intergenic |
| TATACAAGAGCTTGAACGCA+AGG | 0.583220 | 3.2:-57794895 | MS.gene049545:CDS |
| GTTGTTCCATGGATTGCAGA+CGG | 0.584302 | 3.2:+57794206 | None:intergenic |
| TCCGATCTCGTCGAGGCTAG+CGG | 0.585549 | 3.2:+57796215 | None:intergenic |
| GGAAAGGTCCATAATGTCGT+CGG | 0.585789 | 3.2:+57796272 | None:intergenic |
| ACCGGTTACGGTAATTGCGC+CGG | 0.595970 | 3.2:-57796114 | MS.gene049545:CDS |
| GTGCCGGCGCCGGAACCAGT+GGG | 0.598903 | 3.2:-57796092 | MS.gene049545:CDS |
| AAGCTCGGTGGAGTAACAAA+CGG | 0.602305 | 3.2:-57796153 | MS.gene049545:CDS |
| TCTCACTTGCAGAGATTGAG+GGG | 0.610410 | 3.2:+57793633 | None:intergenic |
| CCTTCCGATCCCTTAACCGG+CGG | 0.614531 | 3.2:-57796249 | MS.gene049545:CDS |
| GTTCAAGCTCTTGTATATAG+CGG | 0.616568 | 3.2:+57794901 | None:intergenic |
| GCGCGACGGTGGTGAGAGTG+GGG | 0.616993 | 3.2:+57796321 | None:intergenic |
| CAACAGGCACACCTTCGAGA+TGG | 0.617131 | 3.2:-57794187 | MS.gene049545:intron |
| GACGGTAGTTGATTTCGGAG+TGG | 0.621392 | 3.2:+57796298 | None:intergenic |
| ATAGGCTTAAGATTGCTACC+GGG | 0.624945 | 3.2:-57793931 | MS.gene049545:CDS |
| TGCACCAGATGCAATTTGCA+GGG | 0.627466 | 3.2:-57793871 | MS.gene049545:CDS |
| ATAATTCGGCACGTCAGATG+GGG | 0.631949 | 3.2:+57793772 | None:intergenic |
| GATGGGGAGTGACCAAATTG+GGG | 0.632562 | 3.2:+57793788 | None:intergenic |
| GATCTCGTCGAGGCTAGCGG+TGG | 0.633559 | 3.2:+57796218 | None:intergenic |
| GGGCTTGACATCAGTAACAA+AGG | 0.634447 | 3.2:-57793680 | MS.gene049545:CDS |
| AATAGTAGCTACCATCTCGA+AGG | 0.635096 | 3.2:+57794176 | None:intergenic |
| ATAACGACGGAGAGAAGAGT+GGG | 0.635697 | 3.2:-57796068 | MS.gene049545:CDS |
| TGATTTCGGAGTGGGCGCGA+CGG | 0.636065 | 3.2:+57796307 | None:intergenic |
| CTCACTTGCAGAGATTGAGG+GGG | 0.649510 | 3.2:+57793634 | None:intergenic |
| CGCCGGTTAAGGGATCGGAA+GGG | 0.652220 | 3.2:+57796250 | None:intergenic |
| ATGTTACGACGCCGAGAACG+AGG | 0.652742 | 3.2:-57796041 | MS.gene049545:CDS |
| TGTATGTTCTGGTGACCTGA+AGG | 0.654943 | 3.2:+57793815 | None:intergenic |
| TAGGCTTAAGATTGCTACCG+GGG | 0.656168 | 3.2:-57793930 | MS.gene049545:CDS |
| CCTGAAGGACCTGAATGTTG+TGG | 0.674365 | 3.2:+57793830 | None:intergenic |
| GGTTCAGACCCTTCAAACAG+AGG | 0.679114 | 3.2:-57794874 | MS.gene049545:CDS |
| CTTCGGATCCGATCTCGTCG+AGG | 0.680866 | 3.2:+57796208 | None:intergenic |
| GCTTAAGATTGCTACCGGGG+AGG | 0.689095 | 3.2:-57793927 | MS.gene049545:CDS |
| GCTGCCGCGAATGAAGACGT+TGG | 0.692550 | 3.2:+57796377 | None:intergenic |
| CCATATTATAAGATTCAGAG+GGG | 0.694210 | 3.2:+57793897 | None:intergenic |
| ATTGACGTCGAGAAGCTCGG+TGG | 0.694586 | 3.2:-57796165 | MS.gene049545:CDS |
| AAAGGTCCATAATGTCGTCG+GGG | 0.698449 | 3.2:+57796274 | None:intergenic |
| AGCTCAGCGAGTTTATCAGG+AGG | 0.701452 | 3.2:+57795937 | None:intergenic |
| ATGTTGCAAAATGATCAGCT+CGG | 0.713760 | 3.2:-57793713 | MS.gene049545:CDS |
| GGAACCAGTGGGAATAACGA+CGG | 0.719526 | 3.2:-57796081 | MS.gene049545:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATACTAGTAATTTAGAT+TGG | - | chr3.2:57795619-57795638 | MS.gene049545:intron | 15.0% |
| !! | TGTTTCAGTTTATTCAAAAA+TGG | + | chr3.2:57794776-57794795 | None:intergenic | 20.0% |
| !!! | AAGTTAGAATATTCCATTTT+TGG | - | chr3.2:57794795-57794814 | MS.gene049545:intron | 20.0% |
| !!! | AATGTTTTTTTTTGACACAA+TGG | - | chr3.2:57794407-57794426 | MS.gene049545:intron | 20.0% |
| !!! | ATATAGTTAGTATTGACATT+TGG | - | chr3.2:57794585-57794604 | MS.gene049545:intron | 20.0% |
| !!! | ATGATGAATAAGAGTTTTTT+TGG | + | chr3.2:57794700-57794719 | None:intergenic | 20.0% |
| !!! | TGATTTGAAATCTAGTTTTT+TGG | - | chr3.2:57794824-57794843 | MS.gene049545:intron | 20.0% |
| !!! | TTGATTTTATCTAGATTCAT+CGG | - | chr3.2:57794211-57794230 | MS.gene049545:CDS | 20.0% |
| !!! | TTTCAAAAACTGAATTTTAG+TGG | - | chr3.2:57795005-57795024 | MS.gene049545:intron | 20.0% |
| !!! | TTTTAGAAAAGACTACAATT+TGG | - | chr3.2:57794507-57794526 | MS.gene049545:intron | 20.0% |
| ! | AAATGCATTTACAATTACTG+TGG | - | chr3.2:57794866-57794885 | MS.gene049545:CDS | 25.0% |
| ! | AACTGCAAATATTTCTTCTT+CGG | - | chr3.2:57795393-57795412 | MS.gene049545:intron | 25.0% |
| ! | ATGGAATGTTAATGTTGAAA+TGG | - | chr3.2:57794426-57794445 | MS.gene049545:intron | 25.0% |
| ! | CAAATCATCTAAACCAAAAA+TGG | + | chr3.2:57794811-57794830 | None:intergenic | 25.0% |
| ! | GTAAATCATAAGAAAGTGAT+TGG | + | chr3.2:57795885-57795904 | None:intergenic | 25.0% |
| ! | TATAATCAAAAGCTGCAAAA+TGG | + | chr3.2:57795361-57795380 | None:intergenic | 25.0% |
| ! | TGGAATGTTAATGTTGAAAT+GGG | - | chr3.2:57794427-57794446 | MS.gene049545:intron | 25.0% |
| ! | TTATCTACTAGAAGAAAGAA+AGG | + | chr3.2:57795572-57795591 | None:intergenic | 25.0% |
| ! | TTGTATCATAAGAAAGTGAT+TGG | + | chr3.2:57795947-57795966 | None:intergenic | 25.0% |
| !! | CCTTTGTTATAATTAGTTAG+CGG | - | chr3.2:57796018-57796037 | MS.gene049545:CDS | 25.0% |
| !!! | ATCACTTATTGATTTTTCAG+AGG | - | chr3.2:57795760-57795779 | MS.gene049545:intron | 25.0% |
| !!! | CAACTTTTTTGTGATTGAAT+TGG | - | chr3.2:57794181-57794200 | MS.gene049545:intron | 25.0% |
| !!! | GATCTTGAAGTATTTCTTTT+TGG | - | chr3.2:57794378-57794397 | MS.gene049545:intron | 25.0% |
| !!! | TCACTTATTGATTTTTCAGA+GGG | - | chr3.2:57795761-57795780 | MS.gene049545:intron | 25.0% |
| !!! | TTGGCAAGTTATTTTAGTAA+TGG | - | chr3.2:57795638-57795657 | MS.gene049545:intron | 25.0% |
| AAACAACTGAAGTCAACAAA+CGG | + | chr3.2:57795703-57795722 | None:intergenic | 30.0% | |
| AACATACAATTTCCCCAATT+TGG | - | chr3.2:57796230-57796249 | MS.gene049545:CDS | 30.0% | |
| AGTAGTTGATTACGATTGTT+TGG | - | chr3.2:57794342-57794361 | MS.gene049545:intron | 30.0% | |
| CAATGAATTTGGCAAAATCA+CGG | + | chr3.2:57794552-57794571 | None:intergenic | 30.0% | |
| CCATATTATAAGATTCAGAG+GGG | + | chr3.2:57796136-57796155 | None:intergenic | 30.0% | |
| CCCATATTATAAGATTCAGA+GGG | + | chr3.2:57796137-57796156 | None:intergenic | 30.0% | |
| CCCTCTGAATCTTATAATAT+GGG | - | chr3.2:57796134-57796153 | MS.gene049545:CDS | 30.0% | |
| CCGCTAACTAATTATAACAA+AGG | + | chr3.2:57796021-57796040 | None:intergenic | 30.0% | |
| GTAGTTGATTACGATTGTTT+GGG | - | chr3.2:57794343-57794362 | MS.gene049545:intron | 30.0% | |
| TCCCATATTATAAGATTCAG+AGG | + | chr3.2:57796138-57796157 | None:intergenic | 30.0% | |
| ! | GTTTGTTGCAACTGATAATT+CGG | + | chr3.2:57796275-57796294 | None:intergenic | 30.0% |
| !! | AAATGGGAATTTTAATGCGT+CGG | - | chr3.2:57794443-57794462 | MS.gene049545:intron | 30.0% |
| !! | TATGATAGAAGTGTCTAAGT+TGG | - | chr3.2:57795299-57795318 | MS.gene049545:intron | 30.0% |
| !!! | CAAGTTATTTTAGTAATGGC+TGG | - | chr3.2:57795642-57795661 | MS.gene049545:intron | 30.0% |
| !!! | GTGTTGGATCTTTTGTTTTT+TGG | - | chr3.2:57795266-57795285 | MS.gene049545:intron | 30.0% |
| !!! | TAGATGAAGTTTTGAACAGT+TGG | + | chr3.2:57795439-57795458 | None:intergenic | 30.0% |
| AATTCGAATCAAACCGGTTA+CGG | - | chr3.2:57793904-57793923 | MS.gene049545:CDS | 35.0% | |
| ACAAAAGATCCAACACACAA+AGG | + | chr3.2:57795262-57795281 | None:intergenic | 35.0% | |
| ATGTTGCAAAATGATCAGCT+CGG | - | chr3.2:57796317-57796336 | MS.gene049545:CDS | 35.0% | |
| ATTGGGGAAATTGTATGTTC+TGG | + | chr3.2:57796229-57796248 | None:intergenic | 35.0% | |
| CCCCTCTGAATCTTATAATA+TGG | - | chr3.2:57796133-57796152 | MS.gene049545:CDS | 35.0% | |
| CTAGATGAGCACAATGAATT+TGG | + | chr3.2:57794563-57794582 | None:intergenic | 35.0% | |
| GAATATGTTTGGAGAGATCA+TGG | - | chr3.2:57794053-57794072 | MS.gene049545:intron | 35.0% | |
| GACCTGGTATAATGTCAATT+GGG | + | chr3.2:57795197-57795216 | None:intergenic | 35.0% | |
| GTTCAAGCTCTTGTATATAG+CGG | + | chr3.2:57795132-57795151 | None:intergenic | 35.0% | |
| TGAATGTCGCGTGTTTAAAT+GGG | - | chr3.2:57794921-57794940 | MS.gene049545:CDS | 35.0% | |
| TGACCTGGTATAATGTCAAT+TGG | + | chr3.2:57795198-57795217 | None:intergenic | 35.0% | |
| TTCAAGCTCTTGTATATAGC+GGG | + | chr3.2:57795131-57795150 | None:intergenic | 35.0% | |
| TTGAATGTCGCGTGTTTAAA+TGG | - | chr3.2:57794920-57794939 | MS.gene049545:CDS | 35.0% | |
| TTTGCAACATAGCTGAGATT+TGG | + | chr3.2:57796307-57796326 | None:intergenic | 35.0% | |
| ! | AAAAACCTCTTAGCACGTTT+TGG | + | chr3.2:57794132-57794151 | None:intergenic | 35.0% |
| ! | TCTTAATGATGCGTTGATGA+AGG | - | chr3.2:57796070-57796089 | MS.gene049545:CDS | 35.0% |
| ! | TTTTCAATGCCACAACATTC+AGG | - | chr3.2:57796191-57796210 | MS.gene049545:CDS | 35.0% |
| !! | AGTATTGACATTTGGCACTT+TGG | - | chr3.2:57794593-57794612 | MS.gene049545:intron | 35.0% |
| AATAGTAGCTACCATCTCGA+AGG | + | chr3.2:57795857-57795876 | None:intergenic | 40.0% | |
| ACTTCGACGACGAATATGTT+TGG | - | chr3.2:57794042-57794061 | MS.gene049545:intron | 40.0% | |
| AGTTGTAGCCTCTGTTTGAA+GGG | + | chr3.2:57795167-57795186 | None:intergenic | 40.0% | |
| ATAGGCTTAAGATTGCTACC+GGG | - | chr3.2:57796099-57796118 | MS.gene049545:CDS | 40.0% | |
| CCAACACACAAAGGAATTTC+TGG | + | chr3.2:57795253-57795272 | None:intergenic | 40.0% | |
| CCAGAAATTCCTTTGTGTGT+TGG | - | chr3.2:57795250-57795269 | MS.gene049545:intron | 40.0% | |
| GATAGGCTTAAGATTGCTAC+CGG | - | chr3.2:57796098-57796117 | MS.gene049545:CDS | 40.0% | |
| GGTTCGAATTCGAATCAAAC+CGG | - | chr3.2:57793898-57793917 | MS.gene049545:CDS | 40.0% | |
| TATACAAGAGCTTGAACGCA+AGG | - | chr3.2:57795135-57795154 | MS.gene049545:intron | 40.0% | |
| TGAAACTACAGCAGCATCTA+TGG | + | chr3.2:57794979-57794998 | None:intergenic | 40.0% | |
| TGCCCAATTGACATTATACC+AGG | - | chr3.2:57795192-57795211 | MS.gene049545:intron | 40.0% | |
| TGGTCGCAAATGCTTATACA+AGG | + | chr3.2:57795419-57795438 | None:intergenic | 40.0% | |
| TGTGCAGAATACTTGCAAAC+CGG | - | chr3.2:57795074-57795093 | MS.gene049545:intron | 40.0% | |
| TTGATCCAAAACGTGCTAAG+AGG | - | chr3.2:57794124-57794143 | MS.gene049545:intron | 40.0% | |
| ! | AGACTAAGTTGAAACTGACC+TGG | + | chr3.2:57795213-57795232 | None:intergenic | 40.0% |
| ! | CGTTGATGAAGGAAGTTGAT+AGG | - | chr3.2:57796081-57796100 | MS.gene049545:CDS | 40.0% |
| ! | GTGTTGGTATTTGATGATCG+CGG | - | chr3.2:57794615-57794634 | MS.gene049545:intron | 40.0% |
| !! | AGCTGAGATTTGGTGAGAAT+TGG | + | chr3.2:57796297-57796316 | None:intergenic | 40.0% |
| !! | ATTTTTCAGAGGGACACAAC+TGG | - | chr3.2:57795771-57795790 | MS.gene049545:intron | 40.0% |
| !! | GTAATGGCTGGTATTGATAC+TGG | - | chr3.2:57795654-57795673 | MS.gene049545:intron | 40.0% |
| AAAGGTCCATAATGTCGTCG+GGG | + | chr3.2:57793759-57793778 | None:intergenic | 45.0% | |
| AATAACGACGGAGAGAAGAG+TGG | - | chr3.2:57793961-57793980 | MS.gene049545:CDS | 45.0% | |
| ACTCTCACTTGCAGAGATTG+AGG | + | chr3.2:57796402-57796421 | None:intergenic | 45.0% | |
| AGAATCACGATGAGTTGTCG+TGG | - | chr3.2:57794484-57794503 | MS.gene049545:intron | 45.0% | |
| AGACATAGCTGCTCTGTTGA+TGG | - | chr3.2:57794015-57794034 | MS.gene049545:intron | 45.0% | |
| AGATGGGGAGTGACCAAATT+GGG | + | chr3.2:57796246-57796265 | None:intergenic | 45.0% | |
| ATAACGACGGAGAGAAGAGT+GGG | - | chr3.2:57793962-57793981 | MS.gene049545:CDS | 45.0% | |
| ATAATTCGGCACGTCAGATG+GGG | + | chr3.2:57796261-57796280 | None:intergenic | 45.0% | |
| ATGCACCAGATGCAATTTGC+AGG | - | chr3.2:57796158-57796177 | MS.gene049545:CDS | 45.0% | |
| CAAAGCTCAGCGAGTTTATC+AGG | + | chr3.2:57794099-57794118 | None:intergenic | 45.0% | |
| CGAATGAAGACGTTGGAAGA+AGG | + | chr3.2:57793649-57793668 | None:intergenic | 45.0% | |
| CTATGTCTATGCCTCGTTCT+CGG | + | chr3.2:57794003-57794022 | None:intergenic | 45.0% | |
| CTCTCACTTGCAGAGATTGA+GGG | + | chr3.2:57796401-57796420 | None:intergenic | 45.0% | |
| CTGATAAACTCGCTGAGCTT+TGG | - | chr3.2:57794097-57794116 | MS.gene049545:intron | 45.0% | |
| GAAAGGTCCATAATGTCGTC+GGG | + | chr3.2:57793760-57793779 | None:intergenic | 45.0% | |
| GAGTTGTAGCCTCTGTTTGA+AGG | + | chr3.2:57795168-57795187 | None:intergenic | 45.0% | |
| GATAATTCGGCACGTCAGAT+GGG | + | chr3.2:57796262-57796281 | None:intergenic | 45.0% | |
| GCGTGTTTAAATGGGATGTC+AGG | - | chr3.2:57794929-57794948 | MS.gene049545:CDS | 45.0% | |
| GGAAAGGTCCATAATGTCGT+CGG | + | chr3.2:57793761-57793780 | None:intergenic | 45.0% | |
| GGGCTTGACATCAGTAACAA+AGG | - | chr3.2:57796350-57796369 | MS.gene049545:CDS | 45.0% | |
| GGTGAAGAAGAGATCGTCTT+CGG | + | chr3.2:57793842-57793861 | None:intergenic | 45.0% | |
| TACATTGACGTCGAGAAGCT+CGG | - | chr3.2:57793862-57793881 | MS.gene049545:CDS | 45.0% | |
| TAGGCTTAAGATTGCTACCG+GGG | - | chr3.2:57796100-57796119 | MS.gene049545:CDS | 45.0% | |
| TCTCACTTGCAGAGATTGAG+GGG | + | chr3.2:57796400-57796419 | None:intergenic | 45.0% | |
| TCTGCAATCCATGGAACAAC+AGG | - | chr3.2:57795827-57795846 | MS.gene049545:intron | 45.0% | |
| TCTTCCAACGTCTTCATTCG+CGG | - | chr3.2:57793649-57793668 | MS.gene049545:CDS | 45.0% | |
| TGATAATTCGGCACGTCAGA+TGG | + | chr3.2:57796263-57796282 | None:intergenic | 45.0% | |
| TGCACCAGATGCAATTTGCA+GGG | - | chr3.2:57796159-57796178 | MS.gene049545:CDS | 45.0% | |
| TGCGCGTTCAAAAGAGAGAA+AGG | - | chr3.2:57795105-57795124 | MS.gene049545:intron | 45.0% | |
| TGTATGTTCTGGTGACCTGA+AGG | + | chr3.2:57796218-57796237 | None:intergenic | 45.0% | |
| TTGACCCTGCAAATTGCATC+TGG | + | chr3.2:57796166-57796185 | None:intergenic | 45.0% | |
| ! | AAGCTCGGTGGAGTAACAAA+CGG | - | chr3.2:57793877-57793896 | MS.gene049545:CDS | 45.0% |
| ! | ACGGTAGTTGATTTCGGAGT+GGG | + | chr3.2:57793734-57793753 | None:intergenic | 45.0% |
| ! | ACGTTGGAAGAAGGTGCATT+GGG | + | chr3.2:57793640-57793659 | None:intergenic | 45.0% |
| ! | GACATTTGGCACTTTGGTGT+TGG | - | chr3.2:57794599-57794618 | MS.gene049545:intron | 45.0% |
| ! | GTTGTTCCATGGATTGCAGA+CGG | + | chr3.2:57795827-57795846 | None:intergenic | 45.0% |
| !!! | TGATGATCGCGGTTTTGTTG+TGG | - | chr3.2:57794626-57794645 | MS.gene049545:intron | 45.0% |
| AAGGTGTGCCTGTTGTTCCA+TGG | + | chr3.2:57795838-57795857 | None:intergenic | 50.0% | |
| AGCTCAGCGAGTTTATCAGG+AGG | + | chr3.2:57794096-57794115 | None:intergenic | 50.0% | |
| CAGATGGGGAGTGACCAAAT+TGG | + | chr3.2:57796247-57796266 | None:intergenic | 50.0% | |
| CCACAACATTCAGGTCCTTC+AGG | - | chr3.2:57796200-57796219 | MS.gene049545:CDS | 50.0% | |
| CCTGAAGGACCTGAATGTTG+TGG | + | chr3.2:57796203-57796222 | None:intergenic | 50.0% | |
| CTCACTTGCAGAGATTGAGG+GGG | + | chr3.2:57796399-57796418 | None:intergenic | 50.0% | |
| GAGCTTCTCGACGTCAATGT+AGG | + | chr3.2:57793863-57793882 | None:intergenic | 50.0% | |
| GATGGGGAGTGACCAAATTG+GGG | + | chr3.2:57796245-57796264 | None:intergenic | 50.0% | |
| GGAACCAGTGGGAATAACGA+CGG | - | chr3.2:57793949-57793968 | MS.gene049545:CDS | 50.0% | |
| GGTTCAGACCCTTCAAACAG+AGG | - | chr3.2:57795156-57795175 | MS.gene049545:intron | 50.0% | |
| TTAAGGGATCGGAAGGGGAA+AGG | + | chr3.2:57793777-57793796 | None:intergenic | 50.0% | |
| ! | GACGGTAGTTGATTTCGGAG+TGG | + | chr3.2:57793735-57793754 | None:intergenic | 50.0% |
| ! | GACGTTGGAAGAAGGTGCAT+TGG | + | chr3.2:57793641-57793660 | None:intergenic | 50.0% |
| ! | GGGGAGACGGTAGTTGATTT+CGG | + | chr3.2:57793740-57793759 | None:intergenic | 50.0% |
| !! | GTCGTTATTCCCACTGGTTC+CGG | + | chr3.2:57793950-57793969 | None:intergenic | 50.0% |
| ACCGGCGCAATTACCGTAAC+CGG | + | chr3.2:57793920-57793939 | None:intergenic | 55.0% | |
| ACCGGTTACGGTAATTGCGC+CGG | - | chr3.2:57793916-57793935 | MS.gene049545:CDS | 55.0% | |
| AGGGGGCTTCAGATTTCACG+AGG | + | chr3.2:57796382-57796401 | None:intergenic | 55.0% | |
| ATCAGCTCGGTCGTTTGCAG+GGG | - | chr3.2:57796330-57796349 | MS.gene049545:CDS | 55.0% | |
| ATGTTACGACGCCGAGAACG+AGG | - | chr3.2:57793989-57794008 | MS.gene049545:intron | 55.0% | |
| ATTGACGTCGAGAAGCTCGG+TGG | - | chr3.2:57793865-57793884 | MS.gene049545:CDS | 55.0% | |
| CAACAGGCACACCTTCGAGA+TGG | - | chr3.2:57795843-57795862 | MS.gene049545:intron | 55.0% | |
| CAAGCTCCGTCTGCAATCCA+TGG | - | chr3.2:57795818-57795837 | MS.gene049545:intron | 55.0% | |
| CCATAATGTCGTCGGGGAGA+CGG | + | chr3.2:57793753-57793772 | None:intergenic | 55.0% | |
| CTCTCCGTCGTTATTCCCAC+TGG | + | chr3.2:57793956-57793975 | None:intergenic | 55.0% | |
| GATCAGCTCGGTCGTTTGCA+GGG | - | chr3.2:57796329-57796348 | MS.gene049545:CDS | 55.0% | |
| GCTTAAGATTGCTACCGGGG+AGG | - | chr3.2:57796103-57796122 | MS.gene049545:CDS | 55.0% | |
| GGGGGCTTCAGATTTCACGA+GGG | + | chr3.2:57796381-57796400 | None:intergenic | 55.0% | |
| TCCCCTTCCGATCCCTTAAC+CGG | - | chr3.2:57793778-57793797 | MS.gene049545:CDS | 55.0% | |
| TGATCAGCTCGGTCGTTTGC+AGG | - | chr3.2:57796328-57796347 | MS.gene049545:CDS | 55.0% | |
| TTCATTCGCGGCAGCGTCAA+CGG | - | chr3.2:57793661-57793680 | MS.gene049545:CDS | 55.0% | |
| TTGAACGCGCAGCAGATTGC+CGG | + | chr3.2:57795096-57795115 | None:intergenic | 55.0% | |
| AGAGGGGTTCATTGCCTCCC+CGG | + | chr3.2:57796120-57796139 | None:intergenic | 60.0% | |
| CCGTCTCCCCGACGACATTA+TGG | - | chr3.2:57793750-57793769 | MS.gene049545:CDS | 60.0% | |
| CCTTCCGATCCCTTAACCGG+CGG | - | chr3.2:57793781-57793800 | MS.gene049545:CDS | 60.0% | |
| CTTCGGATCCGATCTCGTCG+AGG | + | chr3.2:57793825-57793844 | None:intergenic | 60.0% | |
| GCCGGTTAAGGGATCGGAAG+GGG | + | chr3.2:57793782-57793801 | None:intergenic | 60.0% | |
| GCTGCCGCGAATGAAGACGT+TGG | + | chr3.2:57793656-57793675 | None:intergenic | 60.0% | |
| TCCGATCTCGTCGAGGCTAG+CGG | + | chr3.2:57793818-57793837 | None:intergenic | 60.0% | |
| TGATTTCGGAGTGGGCGCGA+CGG | + | chr3.2:57793726-57793745 | None:intergenic | 60.0% | |
| ! | ACCGCTAGCCTCGACGAGAT+CGG | - | chr3.2:57793814-57793833 | MS.gene049545:CDS | 60.0% |
| ! | CGCCGGTTAAGGGATCGGAA+GGG | + | chr3.2:57793783-57793802 | None:intergenic | 60.0% |
| ! | TACGGTAATTGCGCCGGTGC+CGG | - | chr3.2:57793922-57793941 | MS.gene049545:CDS | 60.0% |
| GATCTCGTCGAGGCTAGCGG+TGG | + | chr3.2:57793815-57793834 | None:intergenic | 65.0% | |
| GTGGTGAGAGTGGGGTTCGC+CGG | + | chr3.2:57793704-57793723 | None:intergenic | 65.0% | |
| TCCGATCCCTTAACCGGCGG+CGG | - | chr3.2:57793784-57793803 | MS.gene049545:CDS | 65.0% | |
| ! | CCGCCGGTTAAGGGATCGGA+AGG | + | chr3.2:57793784-57793803 | None:intergenic | 65.0% |
| ! | GAGGATCCGCCGCCGGTTAA+GGG | + | chr3.2:57793793-57793812 | None:intergenic | 65.0% |
| ! | TCCGCCGCCGGTTAAGGGAT+CGG | + | chr3.2:57793788-57793807 | None:intergenic | 65.0% |
| !! | ATTCCCACTGGTTCCGGCGC+CGG | + | chr3.2:57793944-57793963 | None:intergenic | 65.0% |
| AGAGTGGGGTTCGCCGGCGA+CGG | + | chr3.2:57793698-57793717 | None:intergenic | 70.0% | |
| CTCGTCGAGGCTAGCGGTGG+AGG | + | chr3.2:57793812-57793831 | None:intergenic | 70.0% | |
| GCGCGACGGTGGTGAGAGTG+GGG | + | chr3.2:57793712-57793731 | None:intergenic | 70.0% | |
| GGCGCGACGGTGGTGAGAGT+GGG | + | chr3.2:57793713-57793732 | None:intergenic | 70.0% | |
| TTTCGGAGTGGGCGCGACGG+TGG | + | chr3.2:57793723-57793742 | None:intergenic | 70.0% | |
| ! | GGAGGATCCGCCGCCGGTTA+AGG | + | chr3.2:57793794-57793813 | None:intergenic | 70.0% |
| AGCGGTGGAGGATCCGCCGC+CGG | + | chr3.2:57793800-57793819 | None:intergenic | 75.0% | |
| GGCGTCTCCACCACCGTCGC+CGG | - | chr3.2:57793682-57793701 | MS.gene049545:CDS | 75.0% | |
| GGGCGCGACGGTGGTGAGAG+TGG | + | chr3.2:57793714-57793733 | None:intergenic | 75.0% | |
| ! | GTGCCGGCGCCGGAACCAGT+GGG | - | chr3.2:57793938-57793957 | MS.gene049545:CDS | 75.0% |
| !! | AATTGCGCCGGTGCCGGCGC+CGG | - | chr3.2:57793928-57793947 | MS.gene049545:CDS | 75.0% |
| !! | ACTGGTTCCGGCGCCGGCAC+CGG | + | chr3.2:57793938-57793957 | None:intergenic | 75.0% |
| ! | GGGTTCGCCGGCGACGGTGG+TGG | + | chr3.2:57793692-57793711 | None:intergenic | 80.0% |
| ! | GTGGGGTTCGCCGGCGACGG+TGG | + | chr3.2:57793695-57793714 | None:intergenic | 80.0% |
| !!! | GGTGCCGGCGCCGGAACCAG+TGG | - | chr3.2:57793937-57793956 | MS.gene049545:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 57793616 | 57796436 | 57793616 | ID=MS.gene049545 |
| chr3.2 | mRNA | 57793616 | 57796436 | 57793616 | ID=MS.gene049545.t1;Parent=MS.gene049545 |
| chr3.2 | exon | 57795907 | 57796436 | 57795907 | ID=MS.gene049545.t1.exon1;Parent=MS.gene049545.t1 |
| chr3.2 | CDS | 57795907 | 57796436 | 57795907 | ID=cds.MS.gene049545.t1;Parent=MS.gene049545.t1 |
| chr3.2 | exon | 57794839 | 57794971 | 57794839 | ID=MS.gene049545.t1.exon2;Parent=MS.gene049545.t1 |
| chr3.2 | CDS | 57794839 | 57794971 | 57794839 | ID=cds.MS.gene049545.t1;Parent=MS.gene049545.t1 |
| chr3.2 | exon | 57794188 | 57794272 | 57794188 | ID=MS.gene049545.t1.exon3;Parent=MS.gene049545.t1 |
| chr3.2 | CDS | 57794188 | 57794272 | 57794188 | ID=cds.MS.gene049545.t1;Parent=MS.gene049545.t1 |
| chr3.2 | exon | 57793616 | 57793983 | 57793616 | ID=MS.gene049545.t1.exon4;Parent=MS.gene049545.t1 |
| chr3.2 | CDS | 57793616 | 57793983 | 57793616 | ID=cds.MS.gene049545.t1;Parent=MS.gene049545.t1 |
| Gene Sequence |
| Protein sequence |
