Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41497.t1 | XP_013460447.1 | 91 | 377 | 28 | 2 | 1 | 371 | 1 | 377 | 2.00E-143 | 518.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41497.t1 | Q6S4P4 | 44.0 | 350 | 151 | 9 | 32 | 371 | 15 | 329 | 5.5e-57 | 223.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41497.t1 | A0A072V8H4 | 91.0 | 377 | 28 | 2 | 1 | 371 | 1 | 377 | 1.4e-143 | 518.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene41497.t1 | TF | bZIP |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049545 | MS.gene41497 | 0.846247 | 2.45E-59 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41497.t1 | MTR_3g467120 | 95.225 | 377 | 12 | 2 | 1 | 371 | 1 | 377 | 0.0 | 741 |
| MS.gene41497.t1 | MTR_5g075390 | 71.471 | 340 | 67 | 6 | 32 | 371 | 49 | 358 | 4.30e-169 | 476 |
| MS.gene41497.t1 | MTR_3g094020 | 46.532 | 346 | 136 | 11 | 34 | 371 | 7 | 311 | 1.24e-85 | 262 |
| MS.gene41497.t1 | MTR_2g099050 | 53.047 | 279 | 98 | 10 | 34 | 291 | 72 | 338 | 2.32e-70 | 226 |
| MS.gene41497.t1 | MTR_6g034945 | 46.263 | 281 | 117 | 13 | 32 | 303 | 26 | 281 | 3.24e-55 | 184 |
| MS.gene41497.t1 | MTR_4g072090 | 38.782 | 312 | 117 | 4 | 30 | 268 | 147 | 457 | 2.28e-52 | 181 |
| MS.gene41497.t1 | MTR_4g072090 | 36.610 | 295 | 113 | 4 | 30 | 251 | 147 | 440 | 9.21e-44 | 157 |
| MS.gene41497.t1 | MTR_1g023690 | 41.085 | 258 | 91 | 7 | 67 | 263 | 222 | 479 | 1.17e-32 | 128 |
| MS.gene41497.t1 | MTR_2g090900 | 47.312 | 93 | 49 | 0 | 171 | 263 | 191 | 283 | 1.59e-19 | 88.6 |
| MS.gene41497.t1 | MTR_2g090900 | 47.312 | 93 | 49 | 0 | 171 | 263 | 191 | 283 | 1.90e-19 | 88.6 |
| MS.gene41497.t1 | MTR_1g099030 | 35.185 | 162 | 91 | 3 | 107 | 268 | 74 | 221 | 3.39e-19 | 87.0 |
| MS.gene41497.t1 | MTR_4g079500 | 41.379 | 116 | 57 | 1 | 171 | 275 | 194 | 309 | 7.92e-19 | 86.7 |
| MS.gene41497.t1 | MTR_8g088650 | 41.935 | 93 | 49 | 1 | 171 | 263 | 234 | 321 | 6.82e-12 | 66.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41497.t1 | AT2G40620 | 48.030 | 406 | 133 | 14 | 5 | 371 | 1 | 367 | 3.09e-101 | 304 |
| MS.gene41497.t1 | AT1G06850 | 64.455 | 211 | 64 | 3 | 150 | 360 | 127 | 326 | 2.04e-84 | 260 |
| MS.gene41497.t1 | AT2G31370 | 50.549 | 273 | 108 | 10 | 34 | 289 | 58 | 320 | 3.51e-69 | 222 |
| MS.gene41497.t1 | AT2G31370 | 51.095 | 274 | 105 | 11 | 34 | 289 | 58 | 320 | 5.19e-69 | 222 |
| MS.gene41497.t1 | AT2G31370 | 51.095 | 274 | 105 | 11 | 34 | 289 | 58 | 320 | 5.19e-69 | 222 |
| MS.gene41497.t1 | AT2G31370 | 51.095 | 274 | 105 | 11 | 34 | 289 | 58 | 320 | 5.19e-69 | 222 |
| MS.gene41497.t1 | AT2G31370 | 51.095 | 274 | 105 | 11 | 34 | 289 | 58 | 320 | 5.19e-69 | 222 |
| MS.gene41497.t1 | AT2G31370 | 51.095 | 274 | 105 | 11 | 34 | 289 | 58 | 320 | 5.19e-69 | 222 |
| MS.gene41497.t1 | AT2G31370 | 51.095 | 274 | 105 | 11 | 34 | 289 | 58 | 320 | 5.19e-69 | 222 |
| MS.gene41497.t1 | AT1G06070 | 51.575 | 254 | 107 | 7 | 34 | 279 | 73 | 318 | 2.39e-64 | 211 |
| MS.gene41497.t1 | AT4G38900 | 40.643 | 342 | 106 | 13 | 30 | 278 | 165 | 502 | 8.53e-50 | 176 |
| MS.gene41497.t1 | AT4G38900 | 40.643 | 342 | 106 | 13 | 30 | 278 | 165 | 502 | 8.53e-50 | 176 |
| MS.gene41497.t1 | AT4G38900 | 39.943 | 348 | 106 | 14 | 30 | 278 | 165 | 508 | 3.31e-47 | 169 |
| MS.gene41497.t1 | AT1G43700 | 55.882 | 170 | 64 | 3 | 133 | 291 | 146 | 315 | 5.28e-46 | 160 |
| MS.gene41497.t1 | AT2G21230 | 68.696 | 115 | 36 | 0 | 154 | 268 | 353 | 467 | 4.21e-43 | 157 |
| MS.gene41497.t1 | AT2G21230 | 68.696 | 115 | 36 | 0 | 154 | 268 | 353 | 467 | 4.21e-43 | 157 |
| MS.gene41497.t1 | AT1G06850 | 52.349 | 149 | 56 | 2 | 78 | 226 | 70 | 203 | 1.94e-40 | 143 |
| MS.gene41497.t1 | AT2G21230 | 64.463 | 121 | 37 | 1 | 154 | 268 | 353 | 473 | 4.35e-40 | 149 |
| MS.gene41497.t1 | AT2G21230 | 70.408 | 98 | 29 | 0 | 154 | 251 | 353 | 450 | 7.65e-37 | 139 |
| MS.gene41497.t1 | AT2G12900 | 41.346 | 104 | 60 | 1 | 163 | 266 | 109 | 211 | 3.66e-20 | 89.4 |
| MS.gene41497.t1 | AT2G42380 | 45.745 | 94 | 51 | 0 | 170 | 263 | 185 | 278 | 7.05e-20 | 89.7 |
| MS.gene41497.t1 | AT3G58120 | 46.237 | 93 | 50 | 0 | 171 | 263 | 202 | 294 | 8.58e-20 | 89.7 |
| MS.gene41497.t1 | AT2G13150 | 41.584 | 101 | 58 | 1 | 163 | 263 | 142 | 241 | 2.38e-17 | 81.3 |
| MS.gene41497.t1 | AT2G42380 | 45.238 | 84 | 46 | 0 | 169 | 252 | 184 | 267 | 6.44e-17 | 80.5 |
| MS.gene41497.t1 | AT2G12940 | 39.423 | 104 | 62 | 1 | 162 | 265 | 140 | 242 | 7.23e-17 | 80.5 |
| MS.gene41497.t1 | AT2G21235 | 34.028 | 144 | 63 | 2 | 171 | 282 | 359 | 502 | 2.06e-16 | 80.9 |
| MS.gene41497.t1 | AT3G58120 | 46.835 | 79 | 42 | 0 | 171 | 249 | 202 | 280 | 7.10e-16 | 77.8 |
| MS.gene41497.t1 | AT2G42380 | 40.426 | 94 | 45 | 1 | 170 | 263 | 185 | 267 | 2.05e-13 | 70.9 |
| MS.gene41497.t1 | AT1G58110 | 44.048 | 84 | 47 | 0 | 180 | 263 | 238 | 321 | 2.06e-12 | 68.2 |
| MS.gene41497.t1 | AT1G58110 | 44.048 | 84 | 47 | 0 | 180 | 263 | 238 | 321 | 2.06e-12 | 68.2 |
Find 130 sgRNAs with CRISPR-Local
Find 189 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCCTCTGAATCGTATAATA+TGG | 0.210184 | 3.1:-51574184 | MS.gene41497:CDS |
| AACATACAATTTCCCCAATT+TGG | 0.232116 | 3.1:-51574087 | MS.gene41497:CDS |
| GGAGGATCCGCCGCCGGTTA+AGG | 0.280693 | 3.1:+51576508 | None:intergenic |
| TCCGGCGCCGGCTCCGGCAC+CGG | 0.286625 | 3.1:+51576364 | None:intergenic |
| CCGTCTCCCCGACGACATTA+TGG | 0.308655 | 3.1:-51576549 | MS.gene41497:CDS |
| CAAAGCTCAGCAAGTTTATC+AGG | 0.313179 | 3.1:+51576197 | None:intergenic |
| CGATCAGCTCGGTCGTTTGC+AGG | 0.321109 | 3.1:-51573989 | MS.gene41497:CDS |
| AGCTGAGATTTGGTGAGAAT+TGG | 0.342600 | 3.1:+51574023 | None:intergenic |
| AGATGGGGAGTGACCAAATT+GGG | 0.344045 | 3.1:+51574074 | None:intergenic |
| GCCGGTGCCGGAGCCGGCGC+CGG | 0.346060 | 3.1:-51576365 | MS.gene41497:CDS |
| GTTTGTTGCAACTGATAATT+CGG | 0.347347 | 3.1:+51574045 | None:intergenic |
| TGACCTGGTATAATGTCAAC+TGG | 0.348388 | 3.1:+51575122 | None:intergenic |
| CAGATGGGGAGTGACCAAAT+TGG | 0.358510 | 3.1:+51574073 | None:intergenic |
| GTCGTTATTCCCACTGGTTC+CGG | 0.359162 | 3.1:+51576346 | None:intergenic |
| AATTGCGCCGGTGCCGGAGC+CGG | 0.364066 | 3.1:-51576371 | MS.gene41497:CDS |
| CTGATAAACTTGCTGAGCTT+TGG | 0.365244 | 3.1:-51576196 | MS.gene41497:CDS |
| CTTCGACGACGAATATGTTT+GGG | 0.368607 | 3.1:-51576250 | MS.gene41497:CDS |
| CTATGTCTATGCCTCGTTCT+CGG | 0.375980 | 3.1:+51576293 | None:intergenic |
| AATTCGAATCAGACCGGTTA+CGG | 0.377222 | 3.1:-51576395 | MS.gene41497:CDS |
| ACTTCGACGACGAATATGTT+TGG | 0.392970 | 3.1:-51576251 | MS.gene41497:CDS |
| TTTGCAACATAGCTGAGATT+TGG | 0.394152 | 3.1:+51574013 | None:intergenic |
| CATTGATGAAGGAAGTTGAT+AGG | 0.399001 | 3.1:-51574236 | MS.gene41497:CDS |
| GGGGAGACGGTAGTTGATTT+CGG | 0.404834 | 3.1:+51576562 | None:intergenic |
| TACGGTAATTGCGCCGGTGC+CGG | 0.408896 | 3.1:-51576377 | MS.gene41497:CDS |
| ATGCACCAGATGCAATTTGC+AGG | 0.409287 | 3.1:-51574159 | MS.gene41497:CDS |
| CTCTCCGTCGTTATTCCCAC+TGG | 0.410355 | 3.1:+51576340 | None:intergenic |
| GAGGATCCGCCGCCGGTTAA+GGG | 0.411594 | 3.1:+51576509 | None:intergenic |
| ATTCCCACTGGTTCCGGCGC+CGG | 0.419639 | 3.1:+51576352 | None:intergenic |
| CTCATCGAAGCTGGCGGTGG+AGG | 0.422026 | 3.1:+51576490 | None:intergenic |
| TCCCCTTCCGATCCCTTAAC+CGG | 0.422801 | 3.1:-51576521 | MS.gene41497:CDS |
| ACCGGCGCAATTACCGTAAC+CGG | 0.425953 | 3.1:+51576382 | None:intergenic |
| CCCTCTGAATCGTATAATAT+GGG | 0.427345 | 3.1:-51574183 | MS.gene41497:CDS |
| ACTGGTTCCGGCGCCGGCTC+CGG | 0.440779 | 3.1:+51576358 | None:intergenic |
| TTGAACGCGCAGCAGATTGC+CGG | 0.443274 | 3.1:+51575224 | None:intergenic |
| TGATAATTCGGCACGTCAGA+TGG | 0.444587 | 3.1:+51574057 | None:intergenic |
| GGCGCGACGGTGGTGAGAGT+GGG | 0.450968 | 3.1:+51576589 | None:intergenic |
| GAGTTGTAGCCTCTGTTTGA+AGG | 0.453582 | 3.1:+51575152 | None:intergenic |
| GATCAGCTCGGTCGTTTGCA+GGG | 0.472645 | 3.1:-51573988 | MS.gene41497:CDS |
| GGGCGCGACGGTGGTGAGAG+TGG | 0.474328 | 3.1:+51576588 | None:intergenic |
| GAGAGGTCCATAATGTCGTC+GGG | 0.474927 | 3.1:+51576542 | None:intergenic |
| TTGATCCAAAACGTGCTAAG+AGG | 0.475774 | 3.1:-51576169 | MS.gene41497:intron |
| ACTCTCACTTGCAGAGATTG+AGG | 0.477229 | 3.1:+51573918 | None:intergenic |
| GAATATGTTTGGGGAGATCA+TGG | 0.479370 | 3.1:-51576240 | MS.gene41497:CDS |
| TTGACCCTGCAAATTGCATC+TGG | 0.487667 | 3.1:+51574154 | None:intergenic |
| AGAGTGGGGCTCGCCGGCGA+CGG | 0.493097 | 3.1:+51576604 | None:intergenic |
| ATTGGGGAAATTGTATGTTC+TGG | 0.495354 | 3.1:+51574091 | None:intergenic |
| GACGTTGGAAGAAGGTGCAT+TGG | 0.495650 | 3.1:+51576655 | None:intergenic |
| CTCTCACTTGCAGAGATTGA+GGG | 0.495905 | 3.1:+51573919 | None:intergenic |
| CCATAATGTCGTCGGGGAGA+CGG | 0.497730 | 3.1:+51576549 | None:intergenic |
| ACGTTGGAAGAAGGTGCATT+GGG | 0.501336 | 3.1:+51576656 | None:intergenic |
| GATAGGCTTAAGATTGCTAC+CGG | 0.505157 | 3.1:-51574219 | MS.gene41497:CDS |
| GCCGGTTAAGGGATCGGAAG+GGG | 0.507894 | 3.1:+51576520 | None:intergenic |
| ACGGTAGTTGATTTCGGAGT+GGG | 0.509526 | 3.1:+51576568 | None:intergenic |
| CAAGCTCCGTCTGCAATCCA+TGG | 0.511411 | 3.1:-51574499 | MS.gene41497:CDS |
| TTCAAGCTCTTGTATATAGC+GGG | 0.518810 | 3.1:+51575189 | None:intergenic |
| TCCGATCCCTTAACCGGCGG+CGG | 0.520683 | 3.1:-51576515 | MS.gene41497:CDS |
| AAGGTGTGCCTGCTGTTCCA+TGG | 0.521823 | 3.1:+51574482 | None:intergenic |
| GGTGAAGAAGAGATCGTCTT+CGG | 0.522787 | 3.1:+51576460 | None:intergenic |
| GATAATTCGGCACGTCAGAT+GGG | 0.528159 | 3.1:+51574058 | None:intergenic |
| AGACATAGTTGTTCGGTGGA+TGG | 0.528534 | 3.1:-51576278 | MS.gene41497:CDS |
| GGATCCGATCTCATCGAAGC+TGG | 0.529140 | 3.1:+51576481 | None:intergenic |
| AGAGGGGTTCATTGCCTCCC+CGG | 0.534741 | 3.1:+51574200 | None:intergenic |
| AATAACGACGGAGAGAAGAG+TGG | 0.537621 | 3.1:-51576332 | MS.gene41497:CDS |
| CGGATGAAGACGTTGGAAGA+AGG | 0.538680 | 3.1:+51576647 | None:intergenic |
| GATCTCATCGAAGCTGGCGG+TGG | 0.540097 | 3.1:+51576487 | None:intergenic |
| ATCAGCTCGGTCGTTTGCAG+GGG | 0.540633 | 3.1:-51573987 | MS.gene41497:CDS |
| TCCGCCGCCGGTTAAGGGAT+CGG | 0.540686 | 3.1:+51576514 | None:intergenic |
| CCACAACATTCAGGTCCTGC+AGG | 0.542464 | 3.1:-51574117 | MS.gene41497:CDS |
| TGTGCAGAATACTTGCAAAC+CGG | 0.544736 | 3.1:-51575243 | MS.gene41497:intron |
| TTAAGGGATCGGAAGGGGAG+AGG | 0.548310 | 3.1:+51576525 | None:intergenic |
| CCCATATTATACGATTCAGA+GGG | 0.549325 | 3.1:+51574183 | None:intergenic |
| TACATTGACGTCGAGAAGCT+CGG | 0.549346 | 3.1:-51576437 | MS.gene41497:CDS |
| TTCATCCGCAGCCACGTCAA+CGG | 0.551169 | 3.1:-51576632 | MS.gene41497:CDS |
| TGCCCAGTTGACATTATACC+AGG | 0.552743 | 3.1:-51575125 | MS.gene41497:intron |
| GTCAACGGCGTCACCGTCGC+CGG | 0.553361 | 3.1:-51576617 | MS.gene41497:CDS |
| TCTGCAATCCATGGAACAGC+AGG | 0.555429 | 3.1:-51574490 | MS.gene41497:CDS |
| GGCGGTGGAGGATCCGCCGC+CGG | 0.555791 | 3.1:+51576502 | None:intergenic |
| GAGCTTCTCGACGTCAATGT+AGG | 0.558602 | 3.1:+51576439 | None:intergenic |
| AGTTGTAGCCTCTGTTTGAA+GGG | 0.560730 | 3.1:+51575153 | None:intergenic |
| TCTTAATGATGCATTGATGA+AGG | 0.561151 | 3.1:-51574247 | MS.gene41497:CDS |
| GGAGCCGGCGCCGGAACCAG+TGG | 0.562454 | 3.1:-51576356 | MS.gene41497:CDS |
| CGACGGTGACGCCGTTGACG+TGG | 0.564814 | 3.1:+51576621 | None:intergenic |
| GAGGCATAGACATAGTTGTT+CGG | 0.570398 | 3.1:-51576285 | MS.gene41497:CDS |
| TGTATGTTCTGGTGACCTGC+AGG | 0.571509 | 3.1:+51574102 | None:intergenic |
| TCCCATATTATACGATTCAG+AGG | 0.571914 | 3.1:+51574182 | None:intergenic |
| GTGGTGAGAGTGGGGCTCGC+CGG | 0.575266 | 3.1:+51576598 | None:intergenic |
| TTTCGGAGTGGGCGCGACGG+TGG | 0.577554 | 3.1:+51576579 | None:intergenic |
| ACCGCCAGCTTCGATGAGAT+CGG | 0.578618 | 3.1:-51576485 | MS.gene41497:CDS |
| CCGCCGGTTAAGGGATCGGA+AGG | 0.578667 | 3.1:+51576518 | None:intergenic |
| TATACAAGAGCTTGAACGCA+AGG | 0.583220 | 3.1:-51575182 | MS.gene41497:CDS |
| GGAGAGGTCCATAATGTCGT+CGG | 0.585789 | 3.1:+51576541 | None:intergenic |
| TTGCAGACGGAGCTTGAGCT+CGG | 0.586207 | 3.1:+51574506 | None:intergenic |
| ACCGGTTACGGTAATTGCGC+CGG | 0.587005 | 3.1:-51576383 | MS.gene41497:CDS |
| TGACGCCGTTGACGTGGCTG+CGG | 0.588042 | 3.1:+51576627 | None:intergenic |
| GGGCTTGACATCAGTAGCAA+AGG | 0.594432 | 3.1:-51573967 | MS.gene41497:CDS |
| GCGCGACGGTGGTGAGAGTG+GGG | 0.598701 | 3.1:+51576590 | None:intergenic |
| TCTCACTTGCAGAGATTGAG+GGG | 0.600065 | 3.1:+51573920 | None:intergenic |
| GCTGTTCCATGGATTGCAGA+CGG | 0.612381 | 3.1:+51574493 | None:intergenic |
| AAGCTCGGCGGAGTAACAAA+CGG | 0.613231 | 3.1:-51576422 | MS.gene41497:CDS |
| GAGCCGGCGCCGGAACCAGT+GGG | 0.615830 | 3.1:-51576355 | MS.gene41497:CDS |
| GTTCAAGCTCTTGTATATAG+CGG | 0.616568 | 3.1:+51575188 | None:intergenic |
| CAGCAGGCACACCTTCGAGA+TGG | 0.617131 | 3.1:-51574474 | MS.gene41497:intron |
| GACGGTAGTTGATTTCGGAG+TGG | 0.621392 | 3.1:+51576567 | None:intergenic |
| CTCACTTGCAGAGATTGAGG+GGG | 0.623339 | 3.1:+51573921 | None:intergenic |
| ATAGGCTTAAGATTGCTACC+GGG | 0.624945 | 3.1:-51574218 | MS.gene41497:CDS |
| TGCACCAGATGCAATTTGCA+GGG | 0.627466 | 3.1:-51574158 | MS.gene41497:CDS |
| GGTTCGAATTCGAATCAGAC+CGG | 0.629064 | 3.1:-51576401 | MS.gene41497:CDS |
| ATAATTCGGCACGTCAGATG+GGG | 0.631949 | 3.1:+51574059 | None:intergenic |
| GATGGGGAGTGACCAAATTG+GGG | 0.632562 | 3.1:+51574075 | None:intergenic |
| AATAGTAGCTACCATCTCGA+AGG | 0.635096 | 3.1:+51574463 | None:intergenic |
| ATAACGACGGAGAGAAGAGT+GGG | 0.635697 | 3.1:-51576331 | MS.gene41497:CDS |
| TGATTTCGGAGTGGGCGCGA+CGG | 0.636065 | 3.1:+51576576 | None:intergenic |
| GCATAGACATAGTTGTTCGG+TGG | 0.636972 | 3.1:-51576282 | MS.gene41497:CDS |
| TCCGATCTCATCGAAGCTGG+CGG | 0.638374 | 3.1:+51576484 | None:intergenic |
| GACCTGGTATAATGTCAACT+GGG | 0.646695 | 3.1:+51575123 | None:intergenic |
| AGCTCAGCAAGTTTATCAGG+AGG | 0.646900 | 3.1:+51576200 | None:intergenic |
| CGCCGGTTAAGGGATCGGAA+GGG | 0.650200 | 3.1:+51576519 | None:intergenic |
| TTCGACGACGAATATGTTTG+GGG | 0.651169 | 3.1:-51576249 | MS.gene41497:CDS |
| ATGTTACGACGCCGAGAACG+AGG | 0.652742 | 3.1:-51576304 | MS.gene41497:CDS |
| TAGGCTTAAGATTGCTACCG+GGG | 0.656168 | 3.1:-51574217 | MS.gene41497:CDS |
| CCTGCAGGACCTGAATGTTG+TGG | 0.659982 | 3.1:+51574117 | None:intergenic |
| GTGGCTGCGGATGAAGACGT+TGG | 0.673993 | 3.1:+51576640 | None:intergenic |
| GGTTCAGACCCTTCAAACAG+AGG | 0.679114 | 3.1:-51575161 | MS.gene41497:CDS |
| CCATATTATACGATTCAGAG+GGG | 0.685145 | 3.1:+51574184 | None:intergenic |
| GCTTAAGATTGCTACCGGGG+AGG | 0.689095 | 3.1:-51574214 | MS.gene41497:CDS |
| CCTTCCGATCCCTTAACCGG+CGG | 0.692804 | 3.1:-51576518 | MS.gene41497:CDS |
| AGAGGTCCATAATGTCGTCG+GGG | 0.698449 | 3.1:+51576543 | None:intergenic |
| GGAACCAGTGGGAATAACGA+CGG | 0.719526 | 3.1:-51576344 | MS.gene41497:CDS |
| ATGTTGCAAAACGATCAGCT+CGG | 0.741818 | 3.1:-51574000 | MS.gene41497:CDS |
| ATTGACGTCGAGAAGCTCGG+CGG | 0.768385 | 3.1:-51576434 | MS.gene41497:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATACTAGTAATTTAGAT+TGG | - | chr3.1:51575882-51575901 | MS.gene41497:intron | 15.0% |
| !!! | TGGTTTTTAATTAAAATTCT+TGG | - | chr3.1:51575937-51575956 | MS.gene41497:intron | 15.0% |
| !! | TACACAAACTTATATGTTAT+AGG | - | chr3.1:51575990-51576009 | MS.gene41497:intron | 20.0% |
| !! | TGTTTCAGTTTATTCAAAAA+TGG | + | chr3.1:51575035-51575054 | None:intergenic | 20.0% |
| !!! | AAGTTAGAATATTCCATTTT+TGG | - | chr3.1:51575054-51575073 | MS.gene41497:intron | 20.0% |
| !!! | ATATAGTTAGTATTGACATT+TGG | - | chr3.1:51574844-51574863 | MS.gene41497:intron | 20.0% |
| !!! | ATGATGAATAAGAGTTTTTT+TGG | + | chr3.1:51574959-51574978 | None:intergenic | 20.0% |
| !!! | TGATTTGAAATCTAGTTTTT+TGG | - | chr3.1:51575083-51575102 | MS.gene41497:intron | 20.0% |
| !!! | TTTCAAAAACTGAATTTTAG+TGG | - | chr3.1:51575264-51575283 | MS.gene41497:intron | 20.0% |
| !!! | TTTTAGAAAAGACTACAATT+TGG | - | chr3.1:51574766-51574785 | MS.gene41497:intron | 20.0% |
| ! | AAATGCATTTACAATTACTG+TGG | - | chr3.1:51575125-51575144 | MS.gene41497:intron | 25.0% |
| ! | AACTGCAAATATTTCTTCTT+CGG | - | chr3.1:51575656-51575675 | MS.gene41497:intron | 25.0% |
| ! | AGTAGTTGATTATGATTGTT+TGG | - | chr3.1:51574629-51574648 | MS.gene41497:intron | 25.0% |
| ! | CAAATCATCTAAACCAAAAA+TGG | + | chr3.1:51575070-51575089 | None:intergenic | 25.0% |
| ! | CCACTAACTAATTATAACAA+AGG | + | chr3.1:51576284-51576303 | None:intergenic | 25.0% |
| ! | GTAAATCATAAGAAAGTGAT+TGG | + | chr3.1:51576148-51576167 | None:intergenic | 25.0% |
| ! | GTAGTTGATTATGATTGTTT+GGG | - | chr3.1:51574630-51574649 | MS.gene41497:intron | 25.0% |
| ! | TATAATCAAAAGCTGCAAAA+TGG | + | chr3.1:51575624-51575643 | None:intergenic | 25.0% |
| ! | TGGAATGTTAATGTTGAAAT+GGG | - | chr3.1:51574685-51574704 | MS.gene41497:intron | 25.0% |
| ! | TTATCTACTAGAAGAAAGAA+AGG | + | chr3.1:51575835-51575854 | None:intergenic | 25.0% |
| ! | TTGGAATGTTAATGTTGAAA+TGG | - | chr3.1:51574684-51574703 | MS.gene41497:intron | 25.0% |
| ! | TTGTATCATAAGAAAGTGAT+TGG | + | chr3.1:51576210-51576229 | None:intergenic | 25.0% |
| !! | CCTTTGTTATAATTAGTTAG+TGG | - | chr3.1:51576281-51576300 | MS.gene41497:CDS | 25.0% |
| !!! | ATCACTTATTGATTTTTCAG+AGG | - | chr3.1:51576023-51576042 | MS.gene41497:intron | 25.0% |
| !!! | ATTGGATTAATGTTGATTTG+AGG | - | chr3.1:51574486-51574505 | MS.gene41497:CDS | 25.0% |
| !!! | CAACTTTTTTGTGATTGAAT+TGG | - | chr3.1:51574468-51574487 | MS.gene41497:intron | 25.0% |
| !!! | GATCTTGAAGTATTTCTTTT+TGG | - | chr3.1:51574665-51574684 | MS.gene41497:intron | 25.0% |
| !!! | TCACTTATTGATTTTTCAGA+GGG | - | chr3.1:51576024-51576043 | MS.gene41497:intron | 25.0% |
| !!! | TTGGCAAGTTATTTTAGTAA+TGG | - | chr3.1:51575901-51575920 | MS.gene41497:intron | 25.0% |
| AAACAACTGAAGTCAACAAA+CGG | + | chr3.1:51575966-51575985 | None:intergenic | 30.0% | |
| AACATACAATTTCCCCAATT+TGG | - | chr3.1:51576493-51576512 | MS.gene41497:CDS | 30.0% | |
| CAATGAATTTGGCAAAATCA+CGG | + | chr3.1:51574811-51574830 | None:intergenic | 30.0% | |
| ! | GTTTGTTGCAACTGATAATT+CGG | + | chr3.1:51576538-51576557 | None:intergenic | 30.0% |
| ! | TCTTAATGATGCATTGATGA+AGG | - | chr3.1:51576333-51576352 | MS.gene41497:CDS | 30.0% |
| !! | AAATGGGAATTTTAATGCGT+CGG | - | chr3.1:51574701-51574720 | MS.gene41497:intron | 30.0% |
| !! | TATGATAGAAGTGTCTAAGT+TGG | - | chr3.1:51575562-51575581 | MS.gene41497:intron | 30.0% |
| !!! | CAAGTTATTTTAGTAATGGC+TGG | - | chr3.1:51575905-51575924 | MS.gene41497:intron | 30.0% |
| !!! | GTGTTGGATCTTTTGTTTTT+TGG | - | chr3.1:51575529-51575548 | MS.gene41497:intron | 30.0% |
| !!! | TAGATGAAGTTTTGAACAGT+TGG | + | chr3.1:51575702-51575721 | None:intergenic | 30.0% |
| ACAAAAGATCCAACACACAA+AGG | + | chr3.1:51575525-51575544 | None:intergenic | 35.0% | |
| ATTGGGGAAATTGTATGTTC+TGG | + | chr3.1:51576492-51576511 | None:intergenic | 35.0% | |
| CCATATTATACGATTCAGAG+GGG | + | chr3.1:51576399-51576418 | None:intergenic | 35.0% | |
| CCCATATTATACGATTCAGA+GGG | + | chr3.1:51576400-51576419 | None:intergenic | 35.0% | |
| CCCTCTGAATCGTATAATAT+GGG | - | chr3.1:51576397-51576416 | MS.gene41497:CDS | 35.0% | |
| CTAGATGAGCACAATGAATT+TGG | + | chr3.1:51574822-51574841 | None:intergenic | 35.0% | |
| GTTCAAGCTCTTGTATATAG+CGG | + | chr3.1:51575395-51575414 | None:intergenic | 35.0% | |
| TCCCATATTATACGATTCAG+AGG | + | chr3.1:51576401-51576420 | None:intergenic | 35.0% | |
| TGAATGTCGCGTGTTTAAAT+GGG | - | chr3.1:51575180-51575199 | MS.gene41497:CDS | 35.0% | |
| TGGTTGCAAATGCTTATACA+AGG | + | chr3.1:51575682-51575701 | None:intergenic | 35.0% | |
| TTCAAGCTCTTGTATATAGC+GGG | + | chr3.1:51575394-51575413 | None:intergenic | 35.0% | |
| TTGAATGTCGCGTGTTTAAA+TGG | - | chr3.1:51575179-51575198 | MS.gene41497:CDS | 35.0% | |
| TTTGCAACATAGCTGAGATT+TGG | + | chr3.1:51576570-51576589 | None:intergenic | 35.0% | |
| ! | AAAAACCTCTTAGCACGTTT+TGG | + | chr3.1:51574419-51574438 | None:intergenic | 35.0% |
| ! | CATTGATGAAGGAAGTTGAT+AGG | - | chr3.1:51576344-51576363 | MS.gene41497:CDS | 35.0% |
| ! | TTTTCAATGCCACAACATTC+AGG | - | chr3.1:51576454-51576473 | MS.gene41497:CDS | 35.0% |
| !! | AGTATTGACATTTGGCACTT+TGG | - | chr3.1:51574852-51574871 | MS.gene41497:intron | 35.0% |
| !! | CTGAATTTTAGTGGTTGCTT+TGG | - | chr3.1:51575273-51575292 | MS.gene41497:intron | 35.0% |
| AATAGTAGCTACCATCTCGA+AGG | + | chr3.1:51576120-51576139 | None:intergenic | 40.0% | |
| AATTCGAATCAGACCGGTTA+CGG | - | chr3.1:51574185-51574204 | MS.gene41497:CDS | 40.0% | |
| ACTTCGACGACGAATATGTT+TGG | - | chr3.1:51574329-51574348 | MS.gene41497:intron | 40.0% | |
| AGACTATGTTGAAACTGACC+TGG | + | chr3.1:51575476-51575495 | None:intergenic | 40.0% | |
| AGTTGTAGCCTCTGTTTGAA+GGG | + | chr3.1:51575430-51575449 | None:intergenic | 40.0% | |
| ATAGGCTTAAGATTGCTACC+GGG | - | chr3.1:51576362-51576381 | MS.gene41497:CDS | 40.0% | |
| ATGTTGCAAAACGATCAGCT+CGG | - | chr3.1:51576580-51576599 | MS.gene41497:CDS | 40.0% | |
| CAAAGCTCAGCAAGTTTATC+AGG | + | chr3.1:51574386-51574405 | None:intergenic | 40.0% | |
| CCAACACACAAAGGAATTTC+TGG | + | chr3.1:51575516-51575535 | None:intergenic | 40.0% | |
| CCAGAAATTCCTTTGTGTGT+TGG | - | chr3.1:51575513-51575532 | MS.gene41497:intron | 40.0% | |
| CCCCTCTGAATCGTATAATA+TGG | - | chr3.1:51576396-51576415 | MS.gene41497:CDS | 40.0% | |
| CTTCGACGACGAATATGTTT+GGG | - | chr3.1:51574330-51574349 | MS.gene41497:intron | 40.0% | |
| GAATATGTTTGGGGAGATCA+TGG | - | chr3.1:51574340-51574359 | MS.gene41497:intron | 40.0% | |
| GACCTGGTATAATGTCAACT+GGG | + | chr3.1:51575460-51575479 | None:intergenic | 40.0% | |
| GAGGCATAGACATAGTTGTT+CGG | - | chr3.1:51574295-51574314 | MS.gene41497:intron | 40.0% | |
| GATAGGCTTAAGATTGCTAC+CGG | - | chr3.1:51576361-51576380 | MS.gene41497:CDS | 40.0% | |
| TATACAAGAGCTTGAACGCA+AGG | - | chr3.1:51575398-51575417 | MS.gene41497:intron | 40.0% | |
| TGAAACTACAGCAGCATCTA+TGG | + | chr3.1:51575238-51575257 | None:intergenic | 40.0% | |
| TGACCTGGTATAATGTCAAC+TGG | + | chr3.1:51575461-51575480 | None:intergenic | 40.0% | |
| TGTGCAGAATACTTGCAAAC+CGG | - | chr3.1:51575337-51575356 | MS.gene41497:intron | 40.0% | |
| TTCGACGACGAATATGTTTG+GGG | - | chr3.1:51574331-51574350 | MS.gene41497:intron | 40.0% | |
| TTGATCCAAAACGTGCTAAG+AGG | - | chr3.1:51574411-51574430 | MS.gene41497:intron | 40.0% | |
| ! | GTGTTGGTATTTGATGATCG+CGG | - | chr3.1:51574874-51574893 | MS.gene41497:intron | 40.0% |
| !! | AGCTGAGATTTGGTGAGAAT+TGG | + | chr3.1:51576560-51576579 | None:intergenic | 40.0% |
| !! | ATTTTTCAGAGGGACACAAC+TGG | - | chr3.1:51576034-51576053 | MS.gene41497:intron | 40.0% |
| !! | CTGATAAACTTGCTGAGCTT+TGG | - | chr3.1:51574384-51574403 | MS.gene41497:intron | 40.0% |
| !! | GTAATGGCTGGTATTGATAC+TGG | - | chr3.1:51575917-51575936 | MS.gene41497:intron | 40.0% |
| AATAACGACGGAGAGAAGAG+TGG | - | chr3.1:51574248-51574267 | MS.gene41497:CDS | 45.0% | |
| ACTCTCACTTGCAGAGATTG+AGG | + | chr3.1:51576665-51576684 | None:intergenic | 45.0% | |
| AGAATCACGATGAGTTGTCG+TGG | - | chr3.1:51574742-51574761 | MS.gene41497:intron | 45.0% | |
| AGATGGGGAGTGACCAAATT+GGG | + | chr3.1:51576509-51576528 | None:intergenic | 45.0% | |
| AGCTCAGCAAGTTTATCAGG+AGG | + | chr3.1:51574383-51574402 | None:intergenic | 45.0% | |
| ATAACGACGGAGAGAAGAGT+GGG | - | chr3.1:51574249-51574268 | MS.gene41497:CDS | 45.0% | |
| ATAATTCGGCACGTCAGATG+GGG | + | chr3.1:51576524-51576543 | None:intergenic | 45.0% | |
| ATGCACCAGATGCAATTTGC+AGG | - | chr3.1:51576421-51576440 | MS.gene41497:CDS | 45.0% | |
| CTATGTCTATGCCTCGTTCT+CGG | + | chr3.1:51574290-51574309 | None:intergenic | 45.0% | |
| CTCTCACTTGCAGAGATTGA+GGG | + | chr3.1:51576664-51576683 | None:intergenic | 45.0% | |
| GAGTTGTAGCCTCTGTTTGA+AGG | + | chr3.1:51575431-51575450 | None:intergenic | 45.0% | |
| GATAATTCGGCACGTCAGAT+GGG | + | chr3.1:51576525-51576544 | None:intergenic | 45.0% | |
| GCATAGACATAGTTGTTCGG+TGG | - | chr3.1:51574298-51574317 | MS.gene41497:intron | 45.0% | |
| GCGTGTTTAAATGGGATGTC+AGG | - | chr3.1:51575188-51575207 | MS.gene41497:CDS | 45.0% | |
| GGTGAAGAAGAGATCGTCTT+CGG | + | chr3.1:51574123-51574142 | None:intergenic | 45.0% | |
| GGTTCGAATTCGAATCAGAC+CGG | - | chr3.1:51574179-51574198 | MS.gene41497:CDS | 45.0% | |
| TACATTGACGTCGAGAAGCT+CGG | - | chr3.1:51574143-51574162 | MS.gene41497:CDS | 45.0% | |
| TAGGCTTAAGATTGCTACCG+GGG | - | chr3.1:51576363-51576382 | MS.gene41497:CDS | 45.0% | |
| TCTCACTTGCAGAGATTGAG+GGG | + | chr3.1:51576663-51576682 | None:intergenic | 45.0% | |
| TGATAATTCGGCACGTCAGA+TGG | + | chr3.1:51576526-51576545 | None:intergenic | 45.0% | |
| TGCACCAGATGCAATTTGCA+GGG | - | chr3.1:51576422-51576441 | MS.gene41497:CDS | 45.0% | |
| TGCCCAGTTGACATTATACC+AGG | - | chr3.1:51575455-51575474 | MS.gene41497:intron | 45.0% | |
| TTGACCCTGCAAATTGCATC+TGG | + | chr3.1:51576429-51576448 | None:intergenic | 45.0% | |
| ! | ACGGTAGTTGATTTCGGAGT+GGG | + | chr3.1:51574015-51574034 | None:intergenic | 45.0% |
| ! | ACGTTGGAAGAAGGTGCATT+GGG | + | chr3.1:51573927-51573946 | None:intergenic | 45.0% |
| ! | AGACATAGTTGTTCGGTGGA+TGG | - | chr3.1:51574302-51574321 | MS.gene41497:intron | 45.0% |
| ! | GACATTTGGCACTTTGGTGT+TGG | - | chr3.1:51574858-51574877 | MS.gene41497:intron | 45.0% |
| !!! | TGATGATCGCGGTTTTGTTG+TGG | - | chr3.1:51574885-51574904 | MS.gene41497:intron | 45.0% |
| AAGCTCGGCGGAGTAACAAA+CGG | - | chr3.1:51574158-51574177 | MS.gene41497:CDS | 50.0% | |
| AGAGGTCCATAATGTCGTCG+GGG | + | chr3.1:51574040-51574059 | None:intergenic | 50.0% | |
| CAGATGGGGAGTGACCAAAT+TGG | + | chr3.1:51576510-51576529 | None:intergenic | 50.0% | |
| CGGATGAAGACGTTGGAAGA+AGG | + | chr3.1:51573936-51573955 | None:intergenic | 50.0% | |
| CTCACTTGCAGAGATTGAGG+GGG | + | chr3.1:51576662-51576681 | None:intergenic | 50.0% | |
| GAGAGGTCCATAATGTCGTC+GGG | + | chr3.1:51574041-51574060 | None:intergenic | 50.0% | |
| GAGCTTCTCGACGTCAATGT+AGG | + | chr3.1:51574144-51574163 | None:intergenic | 50.0% | |
| GATGGGGAGTGACCAAATTG+GGG | + | chr3.1:51576508-51576527 | None:intergenic | 50.0% | |
| GGAACCAGTGGGAATAACGA+CGG | - | chr3.1:51574236-51574255 | MS.gene41497:CDS | 50.0% | |
| GGAGAGGTCCATAATGTCGT+CGG | + | chr3.1:51574042-51574061 | None:intergenic | 50.0% | |
| GGGCTTGACATCAGTAGCAA+AGG | - | chr3.1:51576613-51576632 | MS.gene41497:CDS | 50.0% | |
| GGTTCAGACCCTTCAAACAG+AGG | - | chr3.1:51575419-51575438 | MS.gene41497:intron | 50.0% | |
| TCTGCAATCCATGGAACAGC+AGG | - | chr3.1:51576090-51576109 | MS.gene41497:intron | 50.0% | |
| TGCAGAGATTGAGGGGGTTT+CGG | + | chr3.1:51576656-51576675 | None:intergenic | 50.0% | |
| TGTATGTTCTGGTGACCTGC+AGG | + | chr3.1:51576481-51576500 | None:intergenic | 50.0% | |
| ! | GACGGTAGTTGATTTCGGAG+TGG | + | chr3.1:51574016-51574035 | None:intergenic | 50.0% |
| ! | GACGTTGGAAGAAGGTGCAT+TGG | + | chr3.1:51573928-51573947 | None:intergenic | 50.0% |
| ! | GCTGTTCCATGGATTGCAGA+CGG | + | chr3.1:51576090-51576109 | None:intergenic | 50.0% |
| ! | GGGGAGACGGTAGTTGATTT+CGG | + | chr3.1:51574021-51574040 | None:intergenic | 50.0% |
| !! | GTCGTTATTCCCACTGGTTC+CGG | + | chr3.1:51574237-51574256 | None:intergenic | 50.0% |
| AAGGTGTGCCTGCTGTTCCA+TGG | + | chr3.1:51576101-51576120 | None:intergenic | 55.0% | |
| ACCGCCAGCTTCGATGAGAT+CGG | - | chr3.1:51574095-51574114 | MS.gene41497:CDS | 55.0% | |
| ACCGGCGCAATTACCGTAAC+CGG | + | chr3.1:51574201-51574220 | None:intergenic | 55.0% | |
| ACCGGTTACGGTAATTGCGC+CGG | - | chr3.1:51574197-51574216 | MS.gene41497:CDS | 55.0% | |
| AGGGGGTTTCGGATTTCACG+AGG | + | chr3.1:51576645-51576664 | None:intergenic | 55.0% | |
| ATCAGCTCGGTCGTTTGCAG+GGG | - | chr3.1:51576593-51576612 | MS.gene41497:CDS | 55.0% | |
| ATGTTACGACGCCGAGAACG+AGG | - | chr3.1:51574276-51574295 | MS.gene41497:intron | 55.0% | |
| ATTGACGTCGAGAAGCTCGG+CGG | - | chr3.1:51574146-51574165 | MS.gene41497:CDS | 55.0% | |
| CAAGCTCCGTCTGCAATCCA+TGG | - | chr3.1:51576081-51576100 | MS.gene41497:intron | 55.0% | |
| CCACAACATTCAGGTCCTGC+AGG | - | chr3.1:51576463-51576482 | MS.gene41497:CDS | 55.0% | |
| CCATAATGTCGTCGGGGAGA+CGG | + | chr3.1:51574034-51574053 | None:intergenic | 55.0% | |
| CCTGCAGGACCTGAATGTTG+TGG | + | chr3.1:51576466-51576485 | None:intergenic | 55.0% | |
| CTCTCCGTCGTTATTCCCAC+TGG | + | chr3.1:51574243-51574262 | None:intergenic | 55.0% | |
| GATCAGCTCGGTCGTTTGCA+GGG | - | chr3.1:51576592-51576611 | MS.gene41497:CDS | 55.0% | |
| GCTTAAGATTGCTACCGGGG+AGG | - | chr3.1:51576366-51576385 | MS.gene41497:CDS | 55.0% | |
| GGATCCGATCTCATCGAAGC+TGG | + | chr3.1:51574102-51574121 | None:intergenic | 55.0% | |
| GGGGGTTTCGGATTTCACGA+GGG | + | chr3.1:51576644-51576663 | None:intergenic | 55.0% | |
| TCCCCTTCCGATCCCTTAAC+CGG | - | chr3.1:51574059-51574078 | MS.gene41497:CDS | 55.0% | |
| TCCGATCTCATCGAAGCTGG+CGG | + | chr3.1:51574099-51574118 | None:intergenic | 55.0% | |
| TTAAGGGATCGGAAGGGGAG+AGG | + | chr3.1:51574058-51574077 | None:intergenic | 55.0% | |
| TTCATCCGCAGCCACGTCAA+CGG | - | chr3.1:51573948-51573967 | MS.gene41497:CDS | 55.0% | |
| TTGAACGCGCAGCAGATTGC+CGG | + | chr3.1:51575359-51575378 | None:intergenic | 55.0% | |
| TTGCAGACGGAGCTTGAGCT+CGG | + | chr3.1:51576077-51576096 | None:intergenic | 55.0% | |
| AGAGGGGTTCATTGCCTCCC+CGG | + | chr3.1:51576383-51576402 | None:intergenic | 60.0% | |
| CAGCAGGCACACCTTCGAGA+TGG | - | chr3.1:51576106-51576125 | MS.gene41497:intron | 60.0% | |
| CCGTCTCCCCGACGACATTA+TGG | - | chr3.1:51574031-51574050 | MS.gene41497:CDS | 60.0% | |
| CCTTCCGATCCCTTAACCGG+CGG | - | chr3.1:51574062-51574081 | MS.gene41497:CDS | 60.0% | |
| CGATCAGCTCGGTCGTTTGC+AGG | - | chr3.1:51576591-51576610 | MS.gene41497:CDS | 60.0% | |
| GATCTCATCGAAGCTGGCGG+TGG | + | chr3.1:51574096-51574115 | None:intergenic | 60.0% | |
| GCCGGTTAAGGGATCGGAAG+GGG | + | chr3.1:51574063-51574082 | None:intergenic | 60.0% | |
| GTGGCTGCGGATGAAGACGT+TGG | + | chr3.1:51573943-51573962 | None:intergenic | 60.0% | |
| TGATTTCGGAGTGGGCGCGA+CGG | + | chr3.1:51574007-51574026 | None:intergenic | 60.0% | |
| ! | CGCCGGTTAAGGGATCGGAA+GGG | + | chr3.1:51574064-51574083 | None:intergenic | 60.0% |
| ! | TACGGTAATTGCGCCGGTGC+CGG | - | chr3.1:51574203-51574222 | MS.gene41497:CDS | 60.0% |
| CTCATCGAAGCTGGCGGTGG+AGG | + | chr3.1:51574093-51574112 | None:intergenic | 65.0% | |
| TCCGATCCCTTAACCGGCGG+CGG | - | chr3.1:51574065-51574084 | MS.gene41497:CDS | 65.0% | |
| TGACGCCGTTGACGTGGCTG+CGG | + | chr3.1:51573956-51573975 | None:intergenic | 65.0% | |
| ! | CCGCCGGTTAAGGGATCGGA+AGG | + | chr3.1:51574065-51574084 | None:intergenic | 65.0% |
| ! | GAGGATCCGCCGCCGGTTAA+GGG | + | chr3.1:51574074-51574093 | None:intergenic | 65.0% |
| ! | TCCGCCGCCGGTTAAGGGAT+CGG | + | chr3.1:51574069-51574088 | None:intergenic | 65.0% |
| !! | ATTCCCACTGGTTCCGGCGC+CGG | + | chr3.1:51574231-51574250 | None:intergenic | 65.0% |
| CGACGGTGACGCCGTTGACG+TGG | + | chr3.1:51573962-51573981 | None:intergenic | 70.0% | |
| GCGCGACGGTGGTGAGAGTG+GGG | + | chr3.1:51573993-51574012 | None:intergenic | 70.0% | |
| GGCGCGACGGTGGTGAGAGT+GGG | + | chr3.1:51573994-51574013 | None:intergenic | 70.0% | |
| GTCAACGGCGTCACCGTCGC+CGG | - | chr3.1:51573963-51573982 | MS.gene41497:CDS | 70.0% | |
| GTGGTGAGAGTGGGGCTCGC+CGG | + | chr3.1:51573985-51574004 | None:intergenic | 70.0% | |
| TTTCGGAGTGGGCGCGACGG+TGG | + | chr3.1:51574004-51574023 | None:intergenic | 70.0% | |
| ! | AATTGCGCCGGTGCCGGAGC+CGG | - | chr3.1:51574209-51574228 | MS.gene41497:CDS | 70.0% |
| ! | GGAGGATCCGCCGCCGGTTA+AGG | + | chr3.1:51574075-51574094 | None:intergenic | 70.0% |
| AGAGTGGGGCTCGCCGGCGA+CGG | + | chr3.1:51573979-51573998 | None:intergenic | 75.0% | |
| GGGCGCGACGGTGGTGAGAG+TGG | + | chr3.1:51573995-51574014 | None:intergenic | 75.0% | |
| ! | GAGCCGGCGCCGGAACCAGT+GGG | - | chr3.1:51574225-51574244 | MS.gene41497:CDS | 75.0% |
| !! | ACTGGTTCCGGCGCCGGCTC+CGG | + | chr3.1:51574225-51574244 | None:intergenic | 75.0% |
| ! | GGCGGTGGAGGATCCGCCGC+CGG | + | chr3.1:51574081-51574100 | None:intergenic | 80.0% |
| !! | GGAGCCGGCGCCGGAACCAG+TGG | - | chr3.1:51574224-51574243 | MS.gene41497:CDS | 80.0% |
| !!! | TCCGGCGCCGGCTCCGGCAC+CGG | + | chr3.1:51574219-51574238 | None:intergenic | 85.0% |
| !! | GCCGGTGCCGGAGCCGGCGC+CGG | - | chr3.1:51574215-51574234 | MS.gene41497:CDS | 90.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 51573903 | 51576699 | 51573903 | ID=MS.gene41497 |
| chr3.1 | mRNA | 51573903 | 51576699 | 51573903 | ID=MS.gene41497.t1;Parent=MS.gene41497 |
| chr3.1 | exon | 51576170 | 51576699 | 51576170 | ID=MS.gene41497.t1.exon1;Parent=MS.gene41497.t1 |
| chr3.1 | CDS | 51576170 | 51576699 | 51576170 | ID=cds.MS.gene41497.t1;Parent=MS.gene41497.t1 |
| chr3.1 | exon | 51575126 | 51575258 | 51575126 | ID=MS.gene41497.t1.exon2;Parent=MS.gene41497.t1 |
| chr3.1 | CDS | 51575126 | 51575258 | 51575126 | ID=cds.MS.gene41497.t1;Parent=MS.gene41497.t1 |
| chr3.1 | exon | 51574475 | 51574559 | 51574475 | ID=MS.gene41497.t1.exon3;Parent=MS.gene41497.t1 |
| chr3.1 | CDS | 51574475 | 51574559 | 51574475 | ID=cds.MS.gene41497.t1;Parent=MS.gene41497.t1 |
| chr3.1 | exon | 51573903 | 51574270 | 51573903 | ID=MS.gene41497.t1.exon4;Parent=MS.gene41497.t1 |
| chr3.1 | CDS | 51573903 | 51574270 | 51573903 | ID=cds.MS.gene41497.t1;Parent=MS.gene41497.t1 |
| Gene Sequence |
| Protein sequence |
