Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049723.t1 | XP_024630546.1 | 43.1 | 1036 | 19 | 2 | 1 | 465 | 4 | 1039 | 6.70E-188 | 667.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049723.t1 | P20825 | 42.4 | 139 | 80 | 0 | 260 | 398 | 484 | 622 | 1.2e-25 | 119.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049723.t1 | A0A2I0JBA0 | 50.5 | 461 | 158 | 2 | 40 | 430 | 33 | 493 | 2.7e-122 | 448.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049723 | MS.gene072194 | 0.839583 | 1.45E-57 | -1.69E-46 |
| MS.gene049723 | MS.gene38403 | 0.834559 | 2.80E-56 | -1.69E-46 |
| MS.gene049723 | MS.gene79150 | 0.809566 | 1.78E-50 | -1.69E-46 |
| MS.gene049723 | MS.gene83539 | 0.860975 | 1.42E-63 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049723.t1 | MTR_7g105270 | 71.141 | 149 | 42 | 1 | 1 | 148 | 1 | 149 | 1.80e-52 | 186 |
| MS.gene049723.t1 | MTR_4g102460 | 67.785 | 149 | 47 | 1 | 1 | 148 | 17 | 165 | 2.38e-52 | 187 |
| MS.gene049723.t1 | MTR_7g056297 | 65.414 | 133 | 45 | 1 | 1 | 132 | 1 | 133 | 1.23e-43 | 160 |
| MS.gene049723.t1 | MTR_7g034745 | 94.805 | 77 | 3 | 1 | 1 | 76 | 18 | 94 | 2.07e-42 | 147 |
| MS.gene049723.t1 | MTR_8g054490 | 94.318 | 88 | 4 | 1 | 1 | 87 | 18 | 105 | 1.10e-37 | 138 |
| MS.gene049723.t1 | MTR_1g105095 | 62.136 | 103 | 38 | 1 | 10 | 111 | 76 | 178 | 1.50e-31 | 120 |
| MS.gene049723.t1 | MTR_6g045307 | 29.646 | 226 | 136 | 4 | 248 | 470 | 143 | 348 | 2.85e-22 | 101 |
| MS.gene049723.t1 | MTR_1g052140 | 29.249 | 253 | 112 | 6 | 248 | 468 | 102 | 319 | 2.86e-21 | 98.2 |
| MS.gene049723.t1 | MTR_1361s0010 | 72.414 | 58 | 16 | 0 | 75 | 132 | 1 | 58 | 1.74e-20 | 91.3 |
| MS.gene049723.t1 | MTR_0045s0120 | 67.416 | 89 | 28 | 1 | 1 | 88 | 1 | 89 | 4.73e-20 | 85.9 |
| MS.gene049723.t1 | MTR_7g060240 | 57.143 | 84 | 36 | 0 | 1 | 84 | 19 | 102 | 1.84e-14 | 69.7 |
| MS.gene049723.t1 | MTR_2g076860 | 24.339 | 189 | 100 | 1 | 27 | 215 | 75 | 220 | 1.44e-13 | 70.9 |
| MS.gene049723.t1 | MTR_0003s0410 | 41.935 | 93 | 53 | 1 | 243 | 335 | 672 | 763 | 9.44e-13 | 71.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 91 sgRNAs with CRISPR-Local
Find 303 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCTACGAGAAGCCATTATT+TGG | 0.166385 | 4.2:-47491695 | MS.gene049723:CDS |
| AACTTGGCATTTGGTTGTTT+TGG | 0.251939 | 4.2:+47490790 | None:intergenic |
| AGTTGTGACGCTTCCAATTC+AGG | 0.261063 | 4.2:-47492215 | MS.gene049723:CDS |
| TAAATGTTTCTCCACTCTTA+TGG | 0.272967 | 4.2:+47494152 | None:intergenic |
| TACCCAAGAAGCATTCTTAT+AGG | 0.292770 | 4.2:-47494131 | MS.gene049723:CDS |
| CTTGGTGACAACTTGGCATT+TGG | 0.298252 | 4.2:+47490781 | None:intergenic |
| GACGCTTCCAATTCAGGAAT+TGG | 0.321227 | 4.2:-47492209 | MS.gene049723:CDS |
| ATTCCTATAAGAATGCTTCT+TGG | 0.327190 | 4.2:+47494128 | None:intergenic |
| TCTCTGAATGATTGTCTTTG+TGG | 0.337173 | 4.2:+47494660 | None:intergenic |
| CAAAGACCCGTTCAACAGTT+TGG | 0.339906 | 4.2:+47494568 | None:intergenic |
| TGTAGCTTTCCTTCAAAATC+AGG | 0.348866 | 4.2:+47494615 | None:intergenic |
| TTACAGTTTCTTGTAACTGC+TGG | 0.378263 | 4.2:+47494769 | None:intergenic |
| AACCGCGCCAATTCCTGAAT+TGG | 0.382822 | 4.2:+47492202 | None:intergenic |
| ATCATGAGCTTCCCAAATAA+TGG | 0.383299 | 4.2:+47491683 | None:intergenic |
| CAGTTCAACTCCAACAATAC+TGG | 0.388842 | 4.2:-47494200 | MS.gene049723:CDS |
| GGCATAAAATTCTTTATCAT+AGG | 0.389535 | 4.2:+47492109 | None:intergenic |
| TCCGTTCTTACTTAAACATA+AGG | 0.393717 | 4.2:-47491940 | MS.gene049723:CDS |
| CCGCTTACAGATTGCATAAA+GGG | 0.395776 | 4.2:-47492350 | MS.gene049723:intron |
| CCCGCTTACAGATTGCATAA+AGG | 0.395951 | 4.2:-47492351 | MS.gene049723:intron |
| TTCCTATAAGAATGCTTCTT+GGG | 0.402664 | 4.2:+47494129 | None:intergenic |
| TTTGTGCTTGCTCGGTCCAT+TGG | 0.405567 | 4.2:+47492318 | None:intergenic |
| AAATGCACAACAAGCACAAT+TGG | 0.413256 | 4.2:-47494748 | MS.gene049723:CDS |
| CGTCTAATGTCCAGTATTGT+TGG | 0.417557 | 4.2:+47494190 | None:intergenic |
| CAGTATTGTTGGAGTTGAAC+TGG | 0.432608 | 4.2:+47494201 | None:intergenic |
| TCTACGAGAAGCCATTATTT+GGG | 0.435089 | 4.2:-47491694 | MS.gene049723:CDS |
| TGAAGAAGCATGCTTCCATT+TGG | 0.441960 | 4.2:-47494494 | MS.gene049723:CDS |
| ATCCAGATGAGTTCGTTGAT+TGG | 0.442139 | 4.2:-47494593 | MS.gene049723:CDS |
| ATCGTCTGATTGCATGTGTT+GGG | 0.445325 | 4.2:+47494722 | None:intergenic |
| AGCCAATCAACGAACTCATC+TGG | 0.446536 | 4.2:+47494591 | None:intergenic |
| TTGGCTCCAAACTGTTGAAC+GGG | 0.451354 | 4.2:-47494574 | MS.gene049723:CDS |
| TTCGAACACCTGGTCAAAGT+TGG | 0.453463 | 4.2:+47492241 | None:intergenic |
| GATTAAGAAACTGCATGAAC+AGG | 0.461081 | 4.2:-47490932 | MS.gene049723:intron |
| ACTATGCAAATGAAAGTCAT+TGG | 0.463749 | 4.2:-47491861 | MS.gene049723:CDS |
| ATCAGCTCTTGGTGACAACT+TGG | 0.464395 | 4.2:+47490774 | None:intergenic |
| AATGACTTTCATTTGCATAG+TGG | 0.466168 | 4.2:+47491863 | None:intergenic |
| TTGAAAGGACCATCAGCTCT+TGG | 0.469552 | 4.2:+47490763 | None:intergenic |
| TTGAGAATTCAAATGCTTGA+GGG | 0.471810 | 4.2:+47492013 | None:intergenic |
| CATCGTCTGATTGCATGTGT+TGG | 0.472438 | 4.2:+47494721 | None:intergenic |
| CACTGATTCACAATCTTCTC+AGG | 0.479345 | 4.2:-47491778 | MS.gene049723:CDS |
| TTGTTCGAGCCTTGCAACAT+TGG | 0.485910 | 4.2:-47492085 | MS.gene049723:CDS |
| ACAATCGCTCGTTACCTTGG+TGG | 0.488980 | 4.2:-47494246 | MS.gene049723:CDS |
| TACTGATGTTTATCTGATGA+TGG | 0.491367 | 4.2:+47490985 | None:intergenic |
| TCGAACACCTGGTCAAAGTT+GGG | 0.496804 | 4.2:+47492242 | None:intergenic |
| TTGTTGCAGATGCTCTTAGC+AGG | 0.500657 | 4.2:-47491902 | MS.gene049723:CDS |
| CATTTGCATAGTGGCGAGTA+GGG | 0.503930 | 4.2:+47491872 | None:intergenic |
| GTTCCGTATGCTACTTCAAA+AGG | 0.507167 | 4.2:+47491036 | None:intergenic |
| TCATTTGCATAGTGGCGAGT+AGG | 0.508739 | 4.2:+47491871 | None:intergenic |
| CAAACAATCGCTCGTTACCT+TGG | 0.510512 | 4.2:-47494249 | MS.gene049723:CDS |
| GCTCATGATGGAGGATTAGC+AGG | 0.515319 | 4.2:-47491669 | MS.gene049723:intron |
| AGAAGCATGCTTCCATTTGG+TGG | 0.517055 | 4.2:-47494491 | MS.gene049723:CDS |
| GTTGAGAATTCAAATGCTTG+AGG | 0.523473 | 4.2:+47492012 | None:intergenic |
| AGCCCTTCCCAACTTTGACC+AGG | 0.535813 | 4.2:-47492249 | MS.gene049723:CDS |
| ATTATTTGGGAAGCTCATGA+TGG | 0.541251 | 4.2:-47491681 | MS.gene049723:CDS |
| TCAATCGCAGACATGCTGCT+TGG | 0.545570 | 4.2:-47491983 | MS.gene049723:CDS |
| ATGTTGCAAGGCTCGAACAA+TGG | 0.549133 | 4.2:+47492088 | None:intergenic |
| CACAACTTACTTCGAACACC+TGG | 0.555960 | 4.2:+47492231 | None:intergenic |
| TTCTTACTTAAACATAAGGC+GGG | 0.558390 | 4.2:-47491936 | MS.gene049723:CDS |
| GAAGTGCTACATTCATGAAA+GGG | 0.560965 | 4.2:-47494277 | MS.gene049723:CDS |
| TGAAGTGCTACATTCATGAA+AGG | 0.566548 | 4.2:-47494278 | MS.gene049723:CDS |
| GCCTTATGTTTAAGTAAGAA+CGG | 0.567038 | 4.2:+47491939 | None:intergenic |
| GAAGCATGCTTCCATTTGGT+GGG | 0.576938 | 4.2:-47494490 | MS.gene049723:CDS |
| ACACCTGGTCAAAGTTGGGA+AGG | 0.579818 | 4.2:+47492246 | None:intergenic |
| ATTGGCTCCAAACTGTTGAA+CGG | 0.580900 | 4.2:-47494575 | MS.gene049723:CDS |
| AGAGCACTGAGGAATACATA+AGG | 0.585072 | 4.2:+47491716 | None:intergenic |
| ATTCAGAGACAACGACATCA+AGG | 0.588760 | 4.2:-47494646 | MS.gene049723:CDS |
| AAAACAAAGCGAGCCCGTGA+AGG | 0.589611 | 4.2:-47494459 | MS.gene049723:CDS |
| TTTAGTGAAAAGCTCAACAA+TGG | 0.590823 | 4.2:-47492149 | MS.gene049723:CDS |
| CACTAAAGAAGGCTATAGGA+TGG | 0.595225 | 4.2:+47492165 | None:intergenic |
| AAGTTGTCACCAAGAGCTGA+TGG | 0.598597 | 4.2:-47490772 | MS.gene049723:CDS |
| CTGAGAAGATTGTGAATCAG+TGG | 0.599316 | 4.2:+47491779 | None:intergenic |
| TATTCGTTTAGCCATAAGAG+TGG | 0.600070 | 4.2:-47494163 | MS.gene049723:CDS |
| GTTCTTACTTAAACATAAGG+CGG | 0.602881 | 4.2:-47491937 | MS.gene049723:CDS |
| ATTTGGGAAGCTCATGATGG+AGG | 0.603496 | 4.2:-47491678 | MS.gene049723:CDS |
| CATTGGATTTGAGACAGTCA+AGG | 0.605582 | 4.2:-47491844 | MS.gene049723:CDS |
| GGCGCGGTTCTATGTCAAGA+AGG | 0.614541 | 4.2:-47492188 | MS.gene049723:CDS |
| AAGTTGGGAAGGGCTAGCAC+TGG | 0.617784 | 4.2:+47492257 | None:intergenic |
| TTATCTTGATAATAATGAGA+AGG | 0.621198 | 4.2:+47494378 | None:intergenic |
| CACCTGGTCAAAGTTGGGAA+GGG | 0.621586 | 4.2:+47492247 | None:intergenic |
| TAAAGGGAGATCAATTCCAA+TGG | 0.621858 | 4.2:-47492334 | MS.gene049723:CDS |
| TCAGGACTACTACAGACATG+AGG | 0.624428 | 4.2:-47491760 | MS.gene049723:CDS |
| CAGGACTACTACAGACATGA+GGG | 0.625095 | 4.2:-47491759 | MS.gene049723:CDS |
| GATGATGGAGTCAAGTCTAA+CGG | 0.626466 | 4.2:+47491000 | None:intergenic |
| GTAATGACTCCAATGTTGCA+AGG | 0.650624 | 4.2:+47492076 | None:intergenic |
| GTGCTACATTCATGAAAGGG+AGG | 0.654232 | 4.2:-47494274 | MS.gene049723:CDS |
| GTCAAGTCTAACGGACTGTG+TGG | 0.657876 | 4.2:+47491009 | None:intergenic |
| ATAAGAAGAATTCTCAGTGG+AGG | 0.665480 | 4.2:+47494101 | None:intergenic |
| TTCCAATTCAGGAATTGGCG+CGG | 0.668895 | 4.2:-47492204 | MS.gene049723:CDS |
| CGTCAGTATTTAATCCACCA+AGG | 0.673418 | 4.2:+47494232 | None:intergenic |
| GGTGGATTAAATACTGACGT+TGG | 0.681314 | 4.2:-47494228 | MS.gene049723:CDS |
| GGGATAAGAAGAATTCTCAG+TGG | 0.734712 | 4.2:+47494098 | None:intergenic |
| GCTTCTCGTAGAGAGCACTG+AGG | 0.826263 | 4.2:+47491705 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAAATTCTTAAGTCATTTT+TGG | - | chr4.2:47494275-47494294 | MS.gene049723:CDS | 15.0% |
| !!! | TTATCTTGATAATAATGAGA+AGG | + | chr4.2:47491166-47491185 | None:intergenic | 20.0% |
| ! | GGCATAAAATTCTTTATCAT+AGG | + | chr4.2:47493435-47493454 | None:intergenic | 25.0% |
| ! | TAATTCAACTAATCAAGCTA+CGG | - | chr4.2:47494474-47494493 | MS.gene049723:CDS | 25.0% |
| ! | TATAAAATGAAGCTAATCCA+TGG | + | chr4.2:47493136-47493155 | None:intergenic | 25.0% |
| ! | TCTAATAAATCATCAAGTCT+AGG | + | chr4.2:47492648-47492667 | None:intergenic | 25.0% |
| ! | TTAGTGATTAAAGACACTAA+TGG | + | chr4.2:47492210-47492229 | None:intergenic | 25.0% |
| !! | AAGATCAATCTTTGAAAAGA+TGG | + | chr4.2:47492688-47492707 | None:intergenic | 25.0% |
| !! | ATCCAGATTTTCAAAAGTTT+TGG | - | chr4.2:47493735-47493754 | MS.gene049723:intron | 25.0% |
| !!! | AATCTTTAAAGTTGGAGATT+TGG | - | chr4.2:47494699-47494718 | MS.gene049723:CDS | 25.0% |
| !!! | GATTAGCTTCATTTTATAGA+AGG | - | chr4.2:47493138-47493157 | MS.gene049723:intron | 25.0% |
| !!! | TTCCAAAACTTTTGAAAATC+TGG | + | chr4.2:47493740-47493759 | None:intergenic | 25.0% |
| !!! | TTTCAGTCAAAAGTTGTTTT+AGG | + | chr4.2:47493262-47493281 | None:intergenic | 25.0% |
| AAAAACCATCACTTCTGATA+GGG | - | chr4.2:47494249-47494268 | MS.gene049723:CDS | 30.0% | |
| AAAAAGCAAGATCAAGACTT+GGG | - | chr4.2:47491105-47491124 | MS.gene049723:intron | 30.0% | |
| AAATCATCAAGTCTAGGTAT+CGG | + | chr4.2:47492642-47492661 | None:intergenic | 30.0% | |
| AATGACTTTCATTTGCATAG+TGG | + | chr4.2:47493681-47493700 | None:intergenic | 30.0% | |
| AATTCAACTAATCAAGCTAC+GGG | - | chr4.2:47494475-47494494 | MS.gene049723:CDS | 30.0% | |
| ACTATGCAAATGAAAGTCAT+TGG | - | chr4.2:47493680-47493699 | MS.gene049723:intron | 30.0% | |
| AGCATTTGTTCAATTTCTAC+TGG | + | chr4.2:47492315-47492334 | None:intergenic | 30.0% | |
| ATGAGCTCTTCATCATAAAT+TGG | + | chr4.2:47491694-47491713 | None:intergenic | 30.0% | |
| ATTCCTATAAGAATGCTTCT+TGG | + | chr4.2:47491416-47491435 | None:intergenic | 30.0% | |
| GATTTATTAGATCAGTTGCA+TGG | - | chr4.2:47492657-47492676 | MS.gene049723:intron | 30.0% | |
| GCCTTATGTTTAAGTAAGAA+CGG | + | chr4.2:47493605-47493624 | None:intergenic | 30.0% | |
| GTTCTTACTTAAACATAAGG+CGG | - | chr4.2:47493604-47493623 | MS.gene049723:intron | 30.0% | |
| TAAATGTTTCTCCACTCTTA+TGG | + | chr4.2:47491392-47491411 | None:intergenic | 30.0% | |
| TACTGATGTTTATCTGATGA+TGG | + | chr4.2:47494559-47494578 | None:intergenic | 30.0% | |
| TAGTGAGAGAGAATTTCTAT+TGG | - | chr4.2:47493924-47493943 | MS.gene049723:intron | 30.0% | |
| TCCGTTCTTACTTAAACATA+AGG | - | chr4.2:47493601-47493620 | MS.gene049723:intron | 30.0% | |
| TGTGATGTTATAATAGACAG+TGG | - | chr4.2:47491835-47491854 | MS.gene049723:CDS | 30.0% | |
| TTCCTATAAGAATGCTTCTT+GGG | + | chr4.2:47491415-47491434 | None:intergenic | 30.0% | |
| TTCTTACTTAAACATAAGGC+GGG | - | chr4.2:47493605-47493624 | MS.gene049723:intron | 30.0% | |
| TTGAGAATTCAAATGCTTGA+GGG | + | chr4.2:47493531-47493550 | None:intergenic | 30.0% | |
| TTTAGTGAAAAGCTCAACAA+TGG | - | chr4.2:47493392-47493411 | MS.gene049723:intron | 30.0% | |
| TTTGTTCAATTTCTACTGGA+AGG | + | chr4.2:47492311-47492330 | None:intergenic | 30.0% | |
| ! | ATCAATCTTTGAAAAGATGG+TGG | + | chr4.2:47492685-47492704 | None:intergenic | 30.0% |
| ! | ATTCTATAAGCTGGTCTATT+AGG | + | chr4.2:47492438-47492457 | None:intergenic | 30.0% |
| ! | CGGTAAAAATCTAAAACAGT+GGG | - | chr4.2:47494417-47494436 | MS.gene049723:CDS | 30.0% |
| ! | GCATATAAAAACCAGTGTTT+TGG | + | chr4.2:47494021-47494040 | None:intergenic | 30.0% |
| ! | GTAGATATTCCTGATTTTGA+AGG | - | chr4.2:47490917-47490936 | MS.gene049723:intron | 30.0% |
| ! | TCGGTAAAAATCTAAAACAG+TGG | - | chr4.2:47494416-47494435 | MS.gene049723:CDS | 30.0% |
| ! | TCTAACTCTTCTTCTTTTTC+AGG | + | chr4.2:47491670-47491689 | None:intergenic | 30.0% |
| ! | TGTGGATAGATTTTCAAAGA+TGG | - | chr4.2:47494138-47494157 | MS.gene049723:CDS | 30.0% |
| ! | TGTTTCAAATGTCAAGGTTT+TGG | - | chr4.2:47491550-47491569 | MS.gene049723:intron | 30.0% |
| ! | TTAAAGTTGGAGATTTGGTA+TGG | - | chr4.2:47494704-47494723 | MS.gene049723:CDS | 30.0% |
| ! | TTTTACTCCATCTTTGACAA+AGG | + | chr4.2:47492130-47492149 | None:intergenic | 30.0% |
| ! | TTTTAGATTTTCCCACCAAA+TGG | + | chr4.2:47491065-47491084 | None:intergenic | 30.0% |
| ! | TTTTCACTAAAGAAGGCTAT+AGG | + | chr4.2:47493383-47493402 | None:intergenic | 30.0% |
| !! | AGAAGTATCAAGATCAAGTT+TGG | - | chr4.2:47492007-47492026 | MS.gene049723:CDS | 30.0% |
| !! | AGGCAACAAATCTTTAAAGT+TGG | - | chr4.2:47494691-47494710 | MS.gene049723:CDS | 30.0% |
| !!! | AAAACTTTTTTGTGCTTGCT+CGG | + | chr4.2:47493234-47493253 | None:intergenic | 30.0% |
| !!! | CATCATTAGTCTTTTGACAT+GGG | + | chr4.2:47494174-47494193 | None:intergenic | 30.0% |
| !!! | TTGTTTTTATCAAGTCCACT+CGG | + | chr4.2:47492174-47492193 | None:intergenic | 30.0% |
| AAAACAGTGGGATCTCATAT+TGG | - | chr4.2:47494429-47494448 | MS.gene049723:CDS | 35.0% | |
| AAACTACAATGGCTCAACAA+AGG | - | chr4.2:47491934-47491953 | MS.gene049723:CDS | 35.0% | |
| AAATGCACAACAAGCACAAT+TGG | - | chr4.2:47490793-47490812 | MS.gene049723:CDS | 35.0% | |
| AAGGAAATTGTTCGTCTTCA+TGG | - | chr4.2:47494220-47494239 | MS.gene049723:CDS | 35.0% | |
| ACTACAAACTTGCCAATGAA+TGG | + | chr4.2:47492864-47492883 | None:intergenic | 35.0% | |
| AGAACCTTATGGAGAAAGAT+GGG | - | chr4.2:47494298-47494317 | MS.gene049723:CDS | 35.0% | |
| ATAAGAAGAATTCTCAGTGG+AGG | + | chr4.2:47491443-47491462 | None:intergenic | 35.0% | |
| ATAGGATAAAGCTCATGGTT+TGG | + | chr4.2:47492263-47492282 | None:intergenic | 35.0% | |
| ATCATGAGCTTCCCAAATAA+TGG | + | chr4.2:47493861-47493880 | None:intergenic | 35.0% | |
| ATCTTGATACTTCTGACCAA+TGG | + | chr4.2:47492001-47492020 | None:intergenic | 35.0% | |
| ATTATTTGGGAAGCTCATGA+TGG | - | chr4.2:47493860-47493879 | MS.gene049723:intron | 35.0% | |
| ATTCATTGGCAAGTTTGTAG+TGG | - | chr4.2:47492863-47492882 | MS.gene049723:intron | 35.0% | |
| CAAAAACCATCACTTCTGAT+AGG | - | chr4.2:47494248-47494267 | MS.gene049723:CDS | 35.0% | |
| CATGATGTTAGAAGTTTCCA+TGG | - | chr4.2:47493116-47493135 | MS.gene049723:intron | 35.0% | |
| CCAGAGATGGTTTATATGAA+TGG | - | chr4.2:47492769-47492788 | MS.gene049723:intron | 35.0% | |
| CCATTCATATAAACCATCTC+TGG | + | chr4.2:47492772-47492791 | None:intergenic | 35.0% | |
| CTAACATCATGAATTGACTG+TGG | + | chr4.2:47493107-47493126 | None:intergenic | 35.0% | |
| CTCATCCTTACAAACTACAA+TGG | - | chr4.2:47491923-47491942 | MS.gene049723:CDS | 35.0% | |
| GAAAAAGCAAGATCAAGACT+TGG | - | chr4.2:47491104-47491123 | MS.gene049723:intron | 35.0% | |
| GAACAATAGGATAAAGCTCA+TGG | + | chr4.2:47492268-47492287 | None:intergenic | 35.0% | |
| GACCAATGGAAAAATTCACA+AGG | + | chr4.2:47491987-47492006 | None:intergenic | 35.0% | |
| GATTAAAGACACTAATGGCT+TGG | + | chr4.2:47492205-47492224 | None:intergenic | 35.0% | |
| GATTAAGAAACTGCATGAAC+AGG | - | chr4.2:47494609-47494628 | MS.gene049723:CDS | 35.0% | |
| GTAATTTCAGCATGTTCTTG+TGG | + | chr4.2:47492465-47492484 | None:intergenic | 35.0% | |
| GTATAAGTCAGCAACTTGAA+CGG | + | chr4.2:47494197-47494216 | None:intergenic | 35.0% | |
| GTTGAGAATTCAAATGCTTG+AGG | + | chr4.2:47493532-47493551 | None:intergenic | 35.0% | |
| TAAAGGGAGATCAATTCCAA+TGG | - | chr4.2:47493207-47493226 | MS.gene049723:intron | 35.0% | |
| TATCGGAAATCGATACTTGA+TGG | + | chr4.2:47492625-47492644 | None:intergenic | 35.0% | |
| TATTCGTTTAGCCATAAGAG+TGG | - | chr4.2:47491378-47491397 | MS.gene049723:intron | 35.0% | |
| TCAAAGATTGATCTTCGAAG+TGG | - | chr4.2:47492693-47492712 | MS.gene049723:intron | 35.0% | |
| TCATGAATTGACTGTGGAAT+AGG | + | chr4.2:47493101-47493120 | None:intergenic | 35.0% | |
| TCTACGAGAAGCCATTATTT+GGG | - | chr4.2:47493847-47493866 | MS.gene049723:intron | 35.0% | |
| TCTCTGAATGATTGTCTTTG+TGG | + | chr4.2:47490884-47490903 | None:intergenic | 35.0% | |
| TGTAGCTTTCCTTCAAAATC+AGG | + | chr4.2:47490929-47490948 | None:intergenic | 35.0% | |
| TTACAGTTTCTTGTAACTGC+TGG | + | chr4.2:47490775-47490794 | None:intergenic | 35.0% | |
| TTGGGTTTATTTACTGTGGT+GGG | + | chr4.2:47491520-47491539 | None:intergenic | 35.0% | |
| ! | AAATGTGGTATCGAACTACA+TGG | - | chr4.2:47491867-47491886 | MS.gene049723:CDS | 35.0% |
| ! | AACCTTGACATTTGAAACAC+TGG | + | chr4.2:47491549-47491568 | None:intergenic | 35.0% |
| ! | ACCTTGACATTTGAAACACT+GGG | + | chr4.2:47491548-47491567 | None:intergenic | 35.0% |
| ! | ACTGCATTTAAAACCAGAGA+TGG | - | chr4.2:47492756-47492775 | MS.gene049723:intron | 35.0% |
| ! | CATGAGGGATTTTTGTTCAA+AGG | - | chr4.2:47493797-47493816 | MS.gene049723:intron | 35.0% |
| ! | CATTGTAGTTTGTAAGGATG+AGG | + | chr4.2:47491925-47491944 | None:intergenic | 35.0% |
| ! | CTATCAGAAGTGATGGTTTT+TGG | + | chr4.2:47494250-47494269 | None:intergenic | 35.0% |
| ! | GAAGCTGTTAACAGGATTTT+GGG | - | chr4.2:47494373-47494392 | MS.gene049723:CDS | 35.0% |
| ! | GAAGTGCTACATTCATGAAA+GGG | - | chr4.2:47491264-47491283 | MS.gene049723:intron | 35.0% |
| ! | GTTGAGCTTTTCACTAAAGA+AGG | + | chr4.2:47493390-47493409 | None:intergenic | 35.0% |
| ! | TGAAGCTGTTAACAGGATTT+TGG | - | chr4.2:47494372-47494391 | MS.gene049723:CDS | 35.0% |
| ! | TGAAGTGCTACATTCATGAA+AGG | - | chr4.2:47491263-47491282 | MS.gene049723:intron | 35.0% |
| ! | TGCCTTGTGAATTTTTCCAT+TGG | - | chr4.2:47491982-47492001 | MS.gene049723:CDS | 35.0% |
| ! | TTGAGCCATTGTAGTTTGTA+AGG | + | chr4.2:47491931-47491950 | None:intergenic | 35.0% |
| ! | TTTGGGTTTATTTACTGTGG+TGG | + | chr4.2:47491521-47491540 | None:intergenic | 35.0% |
| !! | AGAAGGTTTTGTAGAAGTAC+TGG | + | chr4.2:47491491-47491510 | None:intergenic | 35.0% |
| !! | AGCTTATGAAGAAGTTGATG+AGG | - | chr4.2:47491627-47491646 | MS.gene049723:intron | 35.0% |
| !! | AGCTTTGGGTTTATTTACTG+TGG | + | chr4.2:47491524-47491543 | None:intergenic | 35.0% |
| !! | AGTTGCTGACTTATACTTCA+AGG | - | chr4.2:47494201-47494220 | MS.gene049723:CDS | 35.0% |
| !! | ATTTTAGTCCCCAAAAAGGA+TGG | - | chr4.2:47492555-47492574 | MS.gene049723:intron | 35.0% |
| !! | CATGCTATTGACTTTATTCC+TGG | - | chr4.2:47492402-47492421 | MS.gene049723:intron | 35.0% |
| !! | TACCCAAGAAGCATTCTTAT+AGG | - | chr4.2:47491410-47491429 | MS.gene049723:intron | 35.0% |
| !! | TGCAATTTTAGTCCCCAAAA+AGG | - | chr4.2:47492551-47492570 | MS.gene049723:intron | 35.0% |
| !! | TTTTTGGGGACTAAAATTGC+AGG | + | chr4.2:47492552-47492571 | None:intergenic | 35.0% |
| !!! | CTGATCGTTATTTGTTTTGC+GGG | + | chr4.2:47491467-47491486 | None:intergenic | 35.0% |
| !!! | CTTCTTTTTCAGGTTCATCT+TGG | + | chr4.2:47491660-47491679 | None:intergenic | 35.0% |
| !!! | GAAGGTTTTGTAGAAGTACT+GGG | + | chr4.2:47491490-47491509 | None:intergenic | 35.0% |
| !!! | GCATCATTAGTCTTTTGACA+TGG | + | chr4.2:47494175-47494194 | None:intergenic | 35.0% |
| !!! | GCTGATCGTTATTTGTTTTG+CGG | + | chr4.2:47491468-47491487 | None:intergenic | 35.0% |
| !!! | GTCATTTTTGGAGAACCTTA+TGG | - | chr4.2:47494287-47494306 | MS.gene049723:CDS | 35.0% |
| !!! | TGATCGTTATTTGTTTTGCG+GGG | + | chr4.2:47491466-47491485 | None:intergenic | 35.0% |
| !!! | TGATCTTGCTTTTTCCTTCA+CGG | + | chr4.2:47491099-47491118 | None:intergenic | 35.0% |
| !!! | TGTCCTTTTGAAGTAGCATA+CGG | - | chr4.2:47494502-47494521 | MS.gene049723:CDS | 35.0% |
| AAAATTGCAGGAACAGCACA+AGG | + | chr4.2:47492540-47492559 | None:intergenic | 40.0% | |
| AAATTGCAGGAACAGCACAA+GGG | + | chr4.2:47492539-47492558 | None:intergenic | 40.0% | |
| AACATCCCTATCAGAAGTGA+TGG | + | chr4.2:47494257-47494276 | None:intergenic | 40.0% | |
| ACAGCTTCTGGTATAACATC+TGG | + | chr4.2:47492348-47492367 | None:intergenic | 40.0% | |
| ACCCAGTGTTTCAAATGTCA+AGG | - | chr4.2:47491544-47491563 | MS.gene049723:intron | 40.0% | |
| ACCTACTCCTTTGTCAAAGA+TGG | - | chr4.2:47492120-47492139 | MS.gene049723:CDS | 40.0% | |
| ACTTTGTCCTTGGATTACCT+CGG | - | chr4.2:47494083-47494102 | MS.gene049723:CDS | 40.0% | |
| AGAACCATCACCATCATCAA+AGG | - | chr4.2:47491601-47491620 | MS.gene049723:intron | 40.0% | |
| AGAAGATGACATGCATCCAT+TGG | + | chr4.2:47492045-47492064 | None:intergenic | 40.0% | |
| AGTACCCATCTTTCTCCATA+AGG | + | chr4.2:47494305-47494324 | None:intergenic | 40.0% | |
| ATAAGCTTCGCCTTTGATGA+TGG | + | chr4.2:47491614-47491633 | None:intergenic | 40.0% | |
| ATCCAGATGAGTTCGTTGAT+TGG | - | chr4.2:47490948-47490967 | MS.gene049723:CDS | 40.0% | |
| ATCGTCTGATTGCATGTGTT+GGG | + | chr4.2:47490822-47490841 | None:intergenic | 40.0% | |
| ATTCAGAGACAACGACATCA+AGG | - | chr4.2:47490895-47490914 | MS.gene049723:intron | 40.0% | |
| CAACAAAGGTAGTGAAGTGA+AGG | - | chr4.2:47491948-47491967 | MS.gene049723:CDS | 40.0% | |
| CAAGTACTTCGACCATTCAT+TGG | - | chr4.2:47492849-47492868 | MS.gene049723:intron | 40.0% | |
| CACTAAAGAAGGCTATAGGA+TGG | + | chr4.2:47493379-47493398 | None:intergenic | 40.0% | |
| CAGCTTCTGGTATAACATCT+GGG | + | chr4.2:47492347-47492366 | None:intergenic | 40.0% | |
| CAGTATTGTTGGAGTTGAAC+TGG | + | chr4.2:47491343-47491362 | None:intergenic | 40.0% | |
| CAGTGGTAGTTGTGAAAATG+TGG | - | chr4.2:47491852-47491871 | MS.gene049723:CDS | 40.0% | |
| CAGTTCAACTCCAACAATAC+TGG | - | chr4.2:47491341-47491360 | MS.gene049723:intron | 40.0% | |
| CCCTTTATGCAATCTGTAAG+CGG | + | chr4.2:47493194-47493213 | None:intergenic | 40.0% | |
| CCGCTTACAGATTGCATAAA+GGG | - | chr4.2:47493191-47493210 | MS.gene049723:intron | 40.0% | |
| CCTTTATGCAATCTGTAAGC+GGG | + | chr4.2:47493193-47493212 | None:intergenic | 40.0% | |
| CGTCAGTATTTAATCCACCA+AGG | + | chr4.2:47491312-47491331 | None:intergenic | 40.0% | |
| CGTCTAATGTCCAGTATTGT+TGG | + | chr4.2:47491354-47491373 | None:intergenic | 40.0% | |
| CTCTACGAGAAGCCATTATT+TGG | - | chr4.2:47493846-47493865 | MS.gene049723:intron | 40.0% | |
| CTGAGAAGATTGTGAATCAG+TGG | + | chr4.2:47493765-47493784 | None:intergenic | 40.0% | |
| CTTGAGCTGACATTGTATGT+AGG | + | chr4.2:47491756-47491775 | None:intergenic | 40.0% | |
| CTTGATCTACAGCAAACACA+AGG | - | chr4.2:47492902-47492921 | MS.gene049723:intron | 40.0% | |
| CTTTATGCAATCTGTAAGCG+GGG | + | chr4.2:47493192-47493211 | None:intergenic | 40.0% | |
| GAAGTGGATACCATCAAATC+AGG | - | chr4.2:47492709-47492728 | MS.gene049723:intron | 40.0% | |
| GACAAACTGAAGCTGTTAAC+AGG | - | chr4.2:47494365-47494384 | MS.gene049723:CDS | 40.0% | |
| GACTCAATTCAAAGAAGCTG+TGG | - | chr4.2:47492230-47492249 | MS.gene049723:CDS | 40.0% | |
| GAGAACCTTATGGAGAAAGA+TGG | - | chr4.2:47494297-47494316 | MS.gene049723:CDS | 40.0% | |
| GATACCATCAAATCAGGCTT+AGG | - | chr4.2:47492715-47492734 | MS.gene049723:intron | 40.0% | |
| GGGATAAGAAGAATTCTCAG+TGG | + | chr4.2:47491446-47491465 | None:intergenic | 40.0% | |
| GGTTACATAATCACAGCTGA+AGG | - | chr4.2:47493032-47493051 | MS.gene049723:intron | 40.0% | |
| GTAATGACTCCAATGTTGCA+AGG | + | chr4.2:47493468-47493487 | None:intergenic | 40.0% | |
| TCCATCTTTGACAAAGGAGT+AGG | + | chr4.2:47492124-47492143 | None:intergenic | 40.0% | |
| TGTGGACTCATTCTATAAGC+TGG | + | chr4.2:47492447-47492466 | None:intergenic | 40.0% | |
| TTCAGTTTGTCCATCTGTCT+GGG | + | chr4.2:47494356-47494375 | None:intergenic | 40.0% | |
| TTCTACTGGAAGGACAGTTT+CGG | + | chr4.2:47492301-47492320 | None:intergenic | 40.0% | |
| TTGAAACACTGGGTAGCTTT+GGG | + | chr4.2:47491538-47491557 | None:intergenic | 40.0% | |
| TTGATTCATGAGACGCATGA+AGG | + | chr4.2:47492832-47492851 | None:intergenic | 40.0% | |
| TTGGTGTGATGTTGTTCCAA+TGG | - | chr4.2:47492026-47492045 | MS.gene049723:CDS | 40.0% | |
| TTTGACAAAGGAGTAGGTGT+TGG | + | chr4.2:47492118-47492137 | None:intergenic | 40.0% | |
| ! | AACCAACGAAGTTACTTTCC+TGG | - | chr4.2:47493010-47493029 | MS.gene049723:intron | 40.0% |
| ! | AATGGACAGTGATGCCATTT+GGG | - | chr4.2:47492787-47492806 | MS.gene049723:intron | 40.0% |
| ! | ACCAACGAAGTTACTTTCCT+GGG | - | chr4.2:47493011-47493030 | MS.gene049723:intron | 40.0% |
| ! | AGTAACTTCGTTGGTTAGGA+AGG | + | chr4.2:47493006-47493025 | None:intergenic | 40.0% |
| ! | ATCACAAACTTTTCCAGCAG+TGG | + | chr4.2:47491821-47491840 | None:intergenic | 40.0% |
| ! | ATTGGCTCCAAACTGTTGAA+CGG | - | chr4.2:47490966-47490985 | MS.gene049723:CDS | 40.0% |
| ! | CAGACAAGTTTTTCTGACGA+AGG | + | chr4.2:47491207-47491226 | None:intergenic | 40.0% |
| ! | CATTGGATTTGAGACAGTCA+AGG | - | chr4.2:47493697-47493716 | MS.gene049723:intron | 40.0% |
| ! | CGGCATTTTCTTCGAACAAT+AGG | + | chr4.2:47492281-47492300 | None:intergenic | 40.0% |
| ! | GGAAAGTAACTTCGTTGGTT+AGG | + | chr4.2:47493010-47493029 | None:intergenic | 40.0% |
| ! | GGAGCATTAGATAACCCAAA+TGG | + | chr4.2:47492804-47492823 | None:intergenic | 40.0% |
| ! | GTTCCGTATGCTACTTCAAA+AGG | + | chr4.2:47494508-47494527 | None:intergenic | 40.0% |
| ! | TAGACGTCTCTTTCAAGTCT+TGG | + | chr4.2:47493950-47493969 | None:intergenic | 40.0% |
| ! | TGAAGAAGCATGCTTCCATT+TGG | - | chr4.2:47491047-47491066 | MS.gene049723:CDS | 40.0% |
| ! | TTTGAAACACTGGGTAGCTT+TGG | + | chr4.2:47491539-47491558 | None:intergenic | 40.0% |
| ! | TTTTTATCAAGTCCACTCGG+TGG | + | chr4.2:47492171-47492190 | None:intergenic | 40.0% |
| !! | AGAGCACTGAGGAATACATA+AGG | + | chr4.2:47493828-47493847 | None:intergenic | 40.0% |
| !! | CACTGATTCACAATCTTCTC+AGG | - | chr4.2:47493763-47493782 | MS.gene049723:intron | 40.0% |
| !! | GATGATGGAGTCAAGTCTAA+CGG | + | chr4.2:47494544-47494563 | None:intergenic | 40.0% |
| !! | GGATTTTGGGAAACCTACTT+CGG | - | chr4.2:47494386-47494405 | MS.gene049723:CDS | 40.0% |
| !! | GGTGGATTAAATACTGACGT+TGG | - | chr4.2:47491313-47491332 | MS.gene049723:intron | 40.0% |
| !!! | AAAACCAGTGTTTTGGCCTT+TGG | + | chr4.2:47494014-47494033 | None:intergenic | 40.0% |
| !!! | GATCTTGCTTTTTCCTTCAC+GGG | + | chr4.2:47491098-47491117 | None:intergenic | 40.0% |
| AAGATGTCGAGTCTGCCATT+TGG | - | chr4.2:47493982-47494001 | MS.gene049723:intron | 45.0% | |
| AAGTTGTCACCAAGAGCTGA+TGG | - | chr4.2:47494769-47494788 | MS.gene049723:CDS | 45.0% | |
| AATCCTTGTGGAACAGCTTC+TGG | + | chr4.2:47492360-47492379 | None:intergenic | 45.0% | |
| ACCCAGGAAAGTAACTTCGT+TGG | + | chr4.2:47493015-47493034 | None:intergenic | 45.0% | |
| ACCTTGGGAAGATGTTAGCA+TGG | - | chr4.2:47494060-47494079 | MS.gene049723:intron | 45.0% | |
| ACGTCAGAAGGATTCTGTGA+TGG | - | chr4.2:47494111-47494130 | MS.gene049723:CDS | 45.0% | |
| AGCCAATCAACGAACTCATC+TGG | + | chr4.2:47490953-47490972 | None:intergenic | 45.0% | |
| AGGTTGAAGCCATCAACAGT+TGG | - | chr4.2:47493075-47493094 | MS.gene049723:intron | 45.0% | |
| AGTTGTGACGCTTCCAATTC+AGG | - | chr4.2:47493326-47493345 | MS.gene049723:intron | 45.0% | |
| ATACCAGAAGCTGTTCCACA+AGG | - | chr4.2:47492354-47492373 | MS.gene049723:intron | 45.0% | |
| ATGTTGCAAGGCTCGAACAA+TGG | + | chr4.2:47493456-47493475 | None:intergenic | 45.0% | |
| ATTTGGGAAGCTCATGATGG+AGG | - | chr4.2:47493863-47493882 | MS.gene049723:intron | 45.0% | |
| CAAACAATCGCTCGTTACCT+TGG | - | chr4.2:47491292-47491311 | MS.gene049723:intron | 45.0% | |
| CAAAGACCCGTTCAACAGTT+TGG | + | chr4.2:47490976-47490995 | None:intergenic | 45.0% | |
| CAAATCGTGACAAGCACAGA+AGG | - | chr4.2:47494671-47494690 | MS.gene049723:CDS | 45.0% | |
| CACAACTTACTTCGAACACC+TGG | + | chr4.2:47493313-47493332 | None:intergenic | 45.0% | |
| CAGCTGTGATTATGTAACCC+AGG | + | chr4.2:47493031-47493050 | None:intergenic | 45.0% | |
| CAGGACTACTACAGACATGA+GGG | - | chr4.2:47493782-47493801 | MS.gene049723:intron | 45.0% | |
| CATCAAATCAGGCTTAGGAC+AGG | - | chr4.2:47492720-47492739 | MS.gene049723:intron | 45.0% | |
| CATCGTCTGATTGCATGTGT+TGG | + | chr4.2:47490823-47490842 | None:intergenic | 45.0% | |
| CATTTGCATAGTGGCGAGTA+GGG | + | chr4.2:47493672-47493691 | None:intergenic | 45.0% | |
| CCCGCTTACAGATTGCATAA+AGG | - | chr4.2:47493190-47493209 | MS.gene049723:intron | 45.0% | |
| CTATTAGGAATGACAGCTCC+AGG | + | chr4.2:47492423-47492442 | None:intergenic | 45.0% | |
| CTTCAGTTTGTCCATCTGTC+TGG | + | chr4.2:47494357-47494376 | None:intergenic | 45.0% | |
| GAAGCATGCTTCCATTTGGT+GGG | - | chr4.2:47491051-47491070 | MS.gene049723:CDS | 45.0% | |
| GAATGGACAGTGATGCCATT+TGG | - | chr4.2:47492786-47492805 | MS.gene049723:intron | 45.0% | |
| GACGCTTCCAATTCAGGAAT+TGG | - | chr4.2:47493332-47493351 | MS.gene049723:intron | 45.0% | |
| GATCTACAGCAAACACAAGG+AGG | - | chr4.2:47492905-47492924 | MS.gene049723:intron | 45.0% | |
| GATGCATGTCATCTTCTCCT+TGG | - | chr4.2:47492048-47492067 | MS.gene049723:CDS | 45.0% | |
| GCATGTTGAATGTCTCGCAT+TGG | + | chr4.2:47492387-47492406 | None:intergenic | 45.0% | |
| GGATGAGGATGACTTTGTGT+TGG | + | chr4.2:47491910-47491929 | None:intergenic | 45.0% | |
| GGATTCTGTGATGGTAGTTG+TGG | - | chr4.2:47494120-47494139 | MS.gene049723:CDS | 45.0% | |
| GTCAAGTCGAAGAATTGCTG+AGG | - | chr4.2:47492487-47492506 | MS.gene049723:intron | 45.0% | |
| GTCGAAGAATTGCTGAGGAA+AGG | - | chr4.2:47492492-47492511 | MS.gene049723:intron | 45.0% | |
| GTGCTACATTCATGAAAGGG+AGG | - | chr4.2:47491267-47491286 | MS.gene049723:intron | 45.0% | |
| GTTAGCATGGACTTTGTCCT+TGG | - | chr4.2:47494073-47494092 | MS.gene049723:CDS | 45.0% | |
| TCAGGACTACTACAGACATG+AGG | - | chr4.2:47493781-47493800 | MS.gene049723:intron | 45.0% | |
| TCAGTTTGTCCATCTGTCTG+GGG | + | chr4.2:47494355-47494374 | None:intergenic | 45.0% | |
| TCATTTGCATAGTGGCGAGT+AGG | + | chr4.2:47493673-47493692 | None:intergenic | 45.0% | |
| TCCATGCTAACATCTTCCCA+AGG | + | chr4.2:47494064-47494083 | None:intergenic | 45.0% | |
| TCGAACACCTGGTCAAAGTT+GGG | + | chr4.2:47493302-47493321 | None:intergenic | 45.0% | |
| TGGAATAGGCCAACTGTTGA+TGG | + | chr4.2:47493087-47493106 | None:intergenic | 45.0% | |
| TGTTGAATGTCTCGCATTGG+CGG | + | chr4.2:47492384-47492403 | None:intergenic | 45.0% | |
| TTAACTCCATTACCACCGAG+TGG | - | chr4.2:47492156-47492175 | MS.gene049723:CDS | 45.0% | |
| TTCCAATTCAGGAATTGGCG+CGG | - | chr4.2:47493337-47493356 | MS.gene049723:intron | 45.0% | |
| TTCGAACACCTGGTCAAAGT+TGG | + | chr4.2:47493303-47493322 | None:intergenic | 45.0% | |
| TTGAAAGGACCATCAGCTCT+TGG | + | chr4.2:47494781-47494800 | None:intergenic | 45.0% | |
| TTGGCTCCAAACTGTTGAAC+GGG | - | chr4.2:47490967-47490986 | MS.gene049723:CDS | 45.0% | |
| TTGTTCGAGCCTTGCAACAT+TGG | - | chr4.2:47493456-47493475 | MS.gene049723:intron | 45.0% | |
| TTGTTGCAGATGCTCTTAGC+AGG | - | chr4.2:47493639-47493658 | MS.gene049723:intron | 45.0% | |
| ! | AACCTACTTCGGAGCTTTGT+CGG | - | chr4.2:47494397-47494416 | MS.gene049723:CDS | 45.0% |
| ! | AGAAGCATGCTTCCATTTGG+TGG | - | chr4.2:47491050-47491069 | MS.gene049723:CDS | 45.0% |
| ! | ATCAGCTCTTGGTGACAACT+TGG | + | chr4.2:47494770-47494789 | None:intergenic | 45.0% |
| ! | CTCCAGCTTCCATCCTTTTT+GGG | + | chr4.2:47492567-47492586 | None:intergenic | 45.0% |
| ! | CTGTCCTAAGCCTGATTTGA+TGG | + | chr4.2:47492722-47492741 | None:intergenic | 45.0% |
| ! | CTTGGTGACAACTTGGCATT+TGG | + | chr4.2:47494763-47494782 | None:intergenic | 45.0% |
| ! | TCCAGCTTCCATCCTTTTTG+GGG | + | chr4.2:47492566-47492585 | None:intergenic | 45.0% |
| ! | TCTCCAGCTTCCATCCTTTT+TGG | + | chr4.2:47492568-47492587 | None:intergenic | 45.0% |
| ! | TGTCAGCTCAAGAAGAGCAT+TGG | - | chr4.2:47491764-47491783 | MS.gene049723:CDS | 45.0% |
| ! | TTGATGGCTTCAACCTTGCT+GGG | + | chr4.2:47493071-47493090 | None:intergenic | 45.0% |
| !! | ACTGTGGTGGGTTTAAGAGA+AGG | + | chr4.2:47491508-47491527 | None:intergenic | 45.0% |
| !! | ATGAGACGCATGAAGGTACT+TGG | + | chr4.2:47492825-47492844 | None:intergenic | 45.0% |
| !! | ATGGTGATGGTTCTTCGTGT+TGG | + | chr4.2:47491595-47491614 | None:intergenic | 45.0% |
| !! | CTCAAGAAGAGCATTGGTTG+AGG | - | chr4.2:47491770-47491789 | MS.gene049723:CDS | 45.0% |
| !! | GGAGGATTAGCAGGTCATTT+TGG | - | chr4.2:47493881-47493900 | MS.gene049723:intron | 45.0% |
| !! | TTCGCCTTTGATGATGGTGA+TGG | + | chr4.2:47491608-47491627 | None:intergenic | 45.0% |
| AAAACAAAGCGAGCCCGTGA+AGG | - | chr4.2:47491082-47491101 | MS.gene049723:intron | 50.0% | |
| AACCGCGCCAATTCCTGAAT+TGG | + | chr4.2:47493342-47493361 | None:intergenic | 50.0% | |
| AAGGCCAAAGGCCAAAACAC+TGG | - | chr4.2:47494007-47494026 | MS.gene049723:intron | 50.0% | |
| ACAATCGCTCGTTACCTTGG+TGG | - | chr4.2:47491295-47491314 | MS.gene049723:intron | 50.0% | |
| ACACCTGGTCAAAGTTGGGA+AGG | + | chr4.2:47493298-47493317 | None:intergenic | 50.0% | |
| ATCTTCTCCTTGGAAGACCC+TGG | - | chr4.2:47492058-47492077 | MS.gene049723:CDS | 50.0% | |
| CACCTGGTCAAAGTTGGGAA+GGG | + | chr4.2:47493297-47493316 | None:intergenic | 50.0% | |
| GAGCTCATTGTTGCTGACCA+TGG | - | chr4.2:47491706-47491725 | MS.gene049723:CDS | 50.0% | |
| GGCTTAGGACAGGAGATGAA+TGG | - | chr4.2:47492730-47492749 | MS.gene049723:intron | 50.0% | |
| GTTGAGTCCGAGGTAATCCA+AGG | + | chr4.2:47494093-47494112 | None:intergenic | 50.0% | |
| TACCGACAAAGCTCCGAAGT+AGG | + | chr4.2:47494402-47494421 | None:intergenic | 50.0% | |
| TCAATCGCAGACATGCTGCT+TGG | - | chr4.2:47493558-47493577 | MS.gene049723:intron | 50.0% | |
| TCCCCAAAAAGGATGGAAGC+TGG | - | chr4.2:47492562-47492581 | MS.gene049723:intron | 50.0% | |
| TGATGGCTTCAACCTTGCTG+GGG | + | chr4.2:47493070-47493089 | None:intergenic | 50.0% | |
| TGCATGAACAGGTTCGACAG+CGG | - | chr4.2:47494620-47494639 | MS.gene049723:CDS | 50.0% | |
| TTTGTGCTTGCTCGGTCCAT+TGG | + | chr4.2:47493226-47493245 | None:intergenic | 50.0% | |
| ! | ACATCTTCCCAAGGTGCTTC+TGG | + | chr4.2:47494055-47494074 | None:intergenic | 50.0% |
| ! | GCTCATGATGGAGGATTAGC+AGG | - | chr4.2:47493872-47493891 | MS.gene049723:intron | 50.0% |
| ! | TCAAGTCCACTCGGTGGTAA+TGG | + | chr4.2:47492165-47492184 | None:intergenic | 50.0% |
| !! | GTCAAGTCTAACGGACTGTG+TGG | + | chr4.2:47494535-47494554 | None:intergenic | 50.0% |
| !! | GTTGATGGCTTCAACCTTGC+TGG | + | chr4.2:47493072-47493091 | None:intergenic | 50.0% |
| !! | TATTCGAGTTGACCCCAGCA+AGG | - | chr4.2:47493055-47493074 | MS.gene049723:intron | 50.0% |
| ACCTCGGACTCAACGTCAGA+AGG | - | chr4.2:47494099-47494118 | MS.gene049723:CDS | 55.0% | |
| AGCACGACGATCGTATTGCC+AGG | + | chr4.2:47492079-47492098 | None:intergenic | 55.0% | |
| AGCCCTTCCCAACTTTGACC+AGG | - | chr4.2:47493292-47493311 | MS.gene049723:intron | 55.0% | |
| CAGCAGTGGTGCAACGAGTA+TGG | + | chr4.2:47491807-47491826 | None:intergenic | 55.0% | |
| CATACTCGTTGCACCACTGC+TGG | - | chr4.2:47491805-47491824 | MS.gene049723:CDS | 55.0% | |
| CGTATTGCCAGGGTCTTCCA+AGG | + | chr4.2:47492068-47492087 | None:intergenic | 55.0% | |
| GCACGACGATCGTATTGCCA+GGG | + | chr4.2:47492078-47492097 | None:intergenic | 55.0% | |
| GCTAGTCATCCCCAGACAGA+TGG | - | chr4.2:47494343-47494362 | MS.gene049723:CDS | 55.0% | |
| GGCGCGGTTCTATGTCAAGA+AGG | - | chr4.2:47493353-47493372 | MS.gene049723:intron | 55.0% | |
| TCCTTCTGACGTTGAGTCCG+AGG | + | chr4.2:47494103-47494122 | None:intergenic | 55.0% | |
| TGATCACCAGAGACTCGCCA+TGG | + | chr4.2:47491726-47491745 | None:intergenic | 55.0% | |
| ! | AAGTTGGGAAGGGCTAGCAC+TGG | + | chr4.2:47493287-47493306 | None:intergenic | 55.0% |
| ! | TCGAGTCTGCCATTTGGCGA+AGG | - | chr4.2:47493988-47494007 | MS.gene049723:intron | 55.0% |
| ! | TGCCATTTGGCGAAGGCCAA+AGG | - | chr4.2:47493995-47494014 | MS.gene049723:intron | 55.0% |
| !! | CCCAAGGTGCTTCTGGAACA+GGG | + | chr4.2:47494048-47494067 | None:intergenic | 55.0% |
| !! | CCCTGTTCCAGAAGCACCTT+GGG | - | chr4.2:47494045-47494064 | MS.gene049723:intron | 55.0% |
| !! | GCTTCTCGTAGAGAGCACTG+AGG | + | chr4.2:47493839-47493858 | None:intergenic | 55.0% |
| !! | TCCCAAGGTGCTTCTGGAAC+AGG | + | chr4.2:47494049-47494068 | None:intergenic | 55.0% |
| !! | TCCCTGTTCCAGAAGCACCT+TGG | - | chr4.2:47494044-47494063 | MS.gene049723:intron | 55.0% |
| TGCTGACCATGGCGAGTCTC+TGG | - | chr4.2:47491717-47491736 | MS.gene049723:CDS | 60.0% | |
| ! | CGCATTGGCGGCAATCCTTG+TGG | + | chr4.2:47492372-47492391 | None:intergenic | 60.0% |
| ! | GGCCTTTGGCCTTCGCCAAA+TGG | + | chr4.2:47494000-47494019 | None:intergenic | 60.0% |
| !! | GGTGCTTCTGGAACAGGGAG+TGG | + | chr4.2:47494043-47494062 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 47490758 | 47494805 | 47490758 | ID=MS.gene049723 |
| chr4.2 | mRNA | 47490758 | 47494805 | 47490758 | ID=MS.gene049723.t1;Parent=MS.gene049723 |
| chr4.2 | exon | 47494073 | 47494805 | 47494073 | ID=MS.gene049723.t1.exon1;Parent=MS.gene049723.t1 |
| chr4.2 | CDS | 47494073 | 47494805 | 47494073 | ID=cds.MS.gene049723.t1;Parent=MS.gene049723.t1 |
| chr4.2 | exon | 47491670 | 47492362 | 47491670 | ID=MS.gene049723.t1.exon2;Parent=MS.gene049723.t1 |
| chr4.2 | CDS | 47491670 | 47492362 | 47491670 | ID=cds.MS.gene049723.t1;Parent=MS.gene049723.t1 |
| chr4.2 | exon | 47490933 | 47491072 | 47490933 | ID=MS.gene049723.t1.exon3;Parent=MS.gene049723.t1 |
| chr4.2 | CDS | 47490933 | 47491072 | 47490933 | ID=cds.MS.gene049723.t1;Parent=MS.gene049723.t1 |
| chr4.2 | exon | 47490758 | 47490820 | 47490758 | ID=MS.gene049723.t1.exon4;Parent=MS.gene049723.t1 |
| chr4.2 | CDS | 47490758 | 47490820 | 47490758 | ID=cds.MS.gene049723.t1;Parent=MS.gene049723.t1 |
| Gene Sequence |
| Protein sequence |
