AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene049975

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene049975.t1 MTR_1g042700 82.938 211 26 2 188 396 138 340 2.47e-118 354
MS.gene049975.t1 MTR_1g442790 80.612 196 30 1 201 396 148 335 2.83e-109 330
MS.gene049975.t1 MTR_1g442790 80.612 196 30 1 201 396 148 335 3.86e-109 331
MS.gene049975.t1 MTR_1g075880 72.959 196 44 2 201 396 155 341 4.06e-99 305
MS.gene049975.t1 MTR_1g069735 67.442 215 56 4 182 396 143 343 5.39e-97 298
MS.gene049975.t1 MTR_1g069735 67.442 215 56 4 182 396 143 343 1.49e-96 297
MS.gene049975.t1 MTR_1g069735 67.442 215 56 4 182 396 143 343 7.17e-96 297
MS.gene049975.t1 MTR_7g097150 72.449 196 44 3 201 396 158 343 1.90e-95 296
MS.gene049975.t1 MTR_4g106510 95.385 130 6 0 76 205 310 439 1.40e-81 259
MS.gene049975.t1 MTR_2g040150 62.000 200 61 4 204 396 154 345 6.30e-76 244
MS.gene049975.t1 MTR_3g104700 60.406 197 75 3 201 396 132 326 1.04e-75 244
MS.gene049975.t1 MTR_3g104700 60.406 197 75 3 201 396 132 326 2.94e-75 243
MS.gene049975.t1 MTR_1g019340 60.104 193 69 3 204 396 149 333 4.18e-73 236
MS.gene049975.t1 MTR_1g019340 60.104 193 69 3 204 396 149 333 1.03e-72 236
MS.gene049975.t1 MTR_3g078490 83.333 126 21 0 80 205 344 469 1.03e-68 226
MS.gene049975.t1 MTR_3g078550 80.952 126 24 0 80 205 284 409 1.04e-68 224
MS.gene049975.t1 MTR_3g078550 80.952 126 24 0 80 205 314 439 2.38e-68 224
MS.gene049975.t1 MTR_4g035835 40.500 200 91 5 201 396 797 972 5.47e-33 131
MS.gene049975.t1 MTR_5g069000 40.000 200 92 5 201 396 801 976 1.09e-32 130
MS.gene049975.t1 MTR_6g470940 38.384 198 99 4 201 396 915 1091 2.07e-31 127
MS.gene049975.t1 MTR_1g090917 46.018 113 61 0 204 316 92 204 8.67e-26 109
MS.gene049975.t1 MTR_1g090917 46.018 113 61 0 204 316 92 204 8.97e-26 108
MS.gene049975.t1 MTR_4g107280 30.729 192 82 2 205 396 138 278 1.86e-25 107
MS.gene049975.t1 MTR_8g083520 41.379 116 66 1 89 204 211 324 1.65e-24 104
MS.gene049975.t1 MTR_6g086340 40.833 120 69 1 85 204 326 443 1.70e-24 105
MS.gene049975.t1 MTR_8g083520 34.337 166 92 3 42 204 253 404 6.42e-24 103
MS.gene049975.t1 MTR_6g086300 40.517 116 67 1 89 204 332 445 1.42e-23 102
MS.gene049975.t1 MTR_6g086300 40.517 116 67 1 89 204 332 445 1.42e-23 102
MS.gene049975.t1 MTR_2g062850 31.193 218 112 6 209 395 217 427 1.88e-23 102
MS.gene049975.t1 MTR_8g083530 40.517 116 67 1 89 204 333 446 4.37e-23 101
MS.gene049975.t1 MTR_2g067660 34.078 179 104 4 80 248 345 519 8.18e-23 100
MS.gene049975.t1 MTR_7g073520 29.167 192 85 2 205 396 190 330 1.14e-22 99.8
MS.gene049975.t1 MTR_1g060790 28.444 225 137 3 195 395 504 728 2.40e-21 96.7
MS.gene049975.t1 MTR_8g006870 29.730 222 120 5 204 395 413 628 4.17e-21 95.9
MS.gene049975.t1 MTR_7g104180 28.947 228 132 6 195 395 526 750 6.21e-21 95.5
MS.gene049975.t1 MTR_8g064170 37.607 117 71 1 89 205 339 453 9.41e-21 94.4
MS.gene049975.t1 MTR_8g064170 37.607 117 71 1 89 205 371 485 1.15e-20 94.4
MS.gene049975.t1 MTR_3g078170 42.202 109 61 1 89 197 372 478 2.16e-20 93.6
MS.gene049975.t1 MTR_7g033640 28.571 224 126 6 204 395 275 496 2.88e-20 93.2
MS.gene049975.t1 MTR_2g095980 32.178 202 106 4 203 395 413 592 4.15e-20 92.8
MS.gene049975.t1 MTR_2g095980 32.338 201 105 4 204 395 669 847 5.86e-20 92.8
MS.gene049975.t1 MTR_2g095980 32.338 201 105 4 204 395 669 847 7.21e-20 92.4
MS.gene049975.t1 MTR_8g070530 29.949 197 93 3 211 395 647 810 7.23e-20 92.4
MS.gene049975.t1 MTR_2g069990 28.866 194 129 3 204 395 137 323 1.26e-19 90.9
MS.gene049975.t1 MTR_6g004720 28.095 210 128 5 209 395 299 508 3.23e-19 90.1
MS.gene049975.t1 MTR_7g081665 29.224 219 124 6 204 395 407 621 3.32e-19 90.1
MS.gene049975.t1 MTR_4g061610 31.527 203 96 5 204 395 681 851 1.40e-18 88.6
MS.gene049975.t1 MTR_8g446990 27.358 212 126 4 210 395 181 390 1.44e-18 87.8
MS.gene049975.t1 MTR_4g107280 28.571 161 64 2 236 396 130 239 2.38e-18 86.3
MS.gene049975.t1 MTR_3g010260 28.636 220 127 6 204 395 458 675 2.71e-18 87.4
MS.gene049975.t1 MTR_2g027240 27.727 220 125 4 209 396 252 469 4.35e-18 86.7
MS.gene049975.t1 MTR_4g107040 35.897 117 73 1 89 205 374 488 5.49e-18 86.3
MS.gene049975.t1 MTR_1g077800 37.302 126 75 2 185 308 37 160 5.90e-18 86.3
MS.gene049975.t1 MTR_1g077800 38.017 121 71 2 190 308 42 160 6.30e-18 86.3
MS.gene049975.t1 MTR_4g113790 28.194 227 122 5 204 396 139 358 6.83e-18 85.9
MS.gene049975.t1 MTR_4g029020 27.500 240 116 6 161 399 14 196 1.33e-17 84.7
MS.gene049975.t1 MTR_8g011780 27.228 202 127 5 211 396 78 275 1.71e-17 84.3
MS.gene049975.t1 MTR_2g085065 25.957 235 151 5 184 396 116 349 1.81e-17 84.3
MS.gene049975.t1 MTR_8g018790 83.673 49 8 0 1 49 475 523 5.09e-17 83.6
MS.gene049975.t1 MTR_8g018790 83.673 49 8 0 1 49 608 656 5.93e-17 83.6
MS.gene049975.t1 MTR_7g072575 28.507 221 104 5 180 399 29 196 7.40e-17 82.4
MS.gene049975.t1 MTR_4g131060 28.922 204 91 6 197 399 52 202 1.56e-16 81.3
MS.gene049975.t1 MTR_1g090917 45.570 79 43 0 238 316 1 79 2.72e-16 80.1
MS.gene049975.t1 MTR_1g090917 45.570 79 43 0 238 316 1 79 2.95e-16 80.1
MS.gene049975.t1 MTR_2g049790 26.804 194 94 3 195 388 55 200 7.05e-16 79.3
MS.gene049975.t1 MTR_2g018990 27.500 200 125 4 211 396 137 330 1.17e-15 79.0
MS.gene049975.t1 MTR_7g053200 25.118 211 139 4 199 396 62 266 3.72e-15 77.0
MS.gene049975.t1 MTR_4g065080 24.402 209 134 5 211 395 70 278 4.64e-15 76.6
MS.gene049975.t1 MTR_2g016340 27.907 215 101 5 186 399 35 196 4.68e-15 77.0
MS.gene049975.t1 MTR_1g103760 26.891 238 120 6 161 397 14 198 4.85e-15 77.0
MS.gene049975.t1 MTR_8g089420 28.000 200 126 5 211 396 133 328 5.72e-15 76.6
MS.gene049975.t1 MTR_4g114670 28.497 193 87 4 205 396 53 195 1.01e-14 75.5
MS.gene049975.t1 MTR_4g114670 28.497 193 87 4 205 396 53 195 1.04e-14 75.9
MS.gene049975.t1 MTR_3g466400 25.339 221 111 5 180 399 31 198 1.20e-14 75.9
MS.gene049975.t1 MTR_5g088350 25.792 221 115 4 177 396 27 199 1.40e-14 74.7
MS.gene049975.t1 MTR_5g088350 25.792 221 115 4 177 396 27 199 1.69e-14 75.1
MS.gene049975.t1 MTR_2g042330 40.367 109 62 2 85 193 326 431 2.05e-14 75.1
MS.gene049975.t1 MTR_8g035890 34.545 110 72 0 197 306 50 159 2.14e-14 73.6
MS.gene049975.t1 MTR_5g075100 25.339 221 112 5 180 399 40 208 2.17e-14 74.7
MS.gene049975.t1 MTR_5g088350 25.792 221 115 4 177 396 27 199 2.29e-14 74.7
MS.gene049975.t1 MTR_2g034160 32.331 133 86 2 74 203 346 477 3.92e-14 74.3
MS.gene049975.t1 MTR_6g012990 24.691 162 118 1 162 323 22 179 6.06e-14 73.2
MS.gene049975.t1 MTR_5g075060 25.792 221 110 5 180 399 29 196 9.51e-14 73.2
MS.gene049975.t1 MTR_6g012990 24.691 162 118 1 162 323 22 179 1.02e-13 72.8
MS.gene049975.t1 MTR_8g086380 29.592 196 84 7 205 399 68 210 1.08e-13 72.8
MS.gene049975.t1 MTR_2g020380 34.653 101 66 0 211 311 46 146 1.44e-13 73.2
MS.gene049975.t1 MTR_1399s0020 35.833 120 72 1 85 204 175 289 1.56e-13 71.6
MS.gene049975.t1 MTR_5g067150 24.887 221 115 3 177 396 23 193 2.25e-13 71.6
MS.gene049975.t1 MTR_5g067150 24.887 221 115 3 177 396 23 193 2.25e-13 71.2
MS.gene049975.t1 MTR_1g076370 37.209 86 54 0 223 308 82 167 2.59e-13 71.6
MS.gene049975.t1 MTR_5g067150 24.887 221 115 3 177 396 23 193 2.73e-13 71.2
MS.gene049975.t1 MTR_2g100030 31.250 128 84 2 190 315 46 171 2.75e-13 71.6
MS.gene049975.t1 MTR_3g110405 33.333 105 69 1 203 306 76 180 2.77e-13 70.5
MS.gene049975.t1 MTR_3g466480 23.887 247 134 5 148 393 10 203 3.17e-13 71.2
MS.gene049975.t1 MTR_3g078170 40.476 84 48 1 89 172 372 453 3.35e-13 71.2
MS.gene049975.t1 MTR_2g009750 34.483 116 75 1 79 193 309 424 3.47e-13 71.2
MS.gene049975.t1 MTR_2g009750 34.483 116 75 1 79 193 310 425 3.47e-13 71.2
MS.gene049975.t1 MTR_8g040300 32.727 110 74 0 197 306 44 153 4.07e-13 69.3
MS.gene049975.t1 MTR_6g048250 24.074 162 119 1 162 323 22 179 4.45e-13 70.5
MS.gene049975.t1 MTR_6g048250 24.074 162 119 1 162 323 22 179 5.32e-13 70.9
MS.gene049975.t1 MTR_2g009750 33.898 118 74 2 79 193 310 426 5.64e-13 70.9
MS.gene049975.t1 MTR_4g006970 27.861 201 95 5 197 396 54 205 5.76e-13 70.5
MS.gene049975.t1 MTR_6g048250 24.074 162 119 1 162 323 22 179 5.96e-13 70.5
MS.gene049975.t1 MTR_3g099920 24.691 162 118 1 162 323 22 179 6.01e-13 70.5
MS.gene049975.t1 MTR_6g012980 26.415 159 116 1 167 324 76 234 6.58e-13 70.1
MS.gene049975.t1 MTR_4g093170 34.821 112 69 2 85 193 343 453 9.14e-13 70.1
MS.gene049975.t1 MTR_3g072320 32.558 129 84 1 180 308 29 154 1.15e-12 69.3
MS.gene049975.t1 MTR_7g116390 37.647 85 51 2 223 306 77 160 1.68e-12 68.2
MS.gene049975.t1 MTR_8g024600 25.000 184 88 2 205 388 59 192 2.27e-12 68.6
MS.gene049975.t1 MTR_8g024590 30.769 104 72 0 205 308 59 162 2.28e-12 68.6
MS.gene049975.t1 MTR_6g006770 30.172 116 77 2 195 308 48 161 2.30e-12 68.9
MS.gene049975.t1 MTR_8g098425 34.286 105 69 0 205 309 452 556 3.82e-12 68.6
MS.gene049975.t1 MTR_5g045190 33.645 107 70 1 206 311 280 386 4.00e-12 68.6
MS.gene049975.t1 MTR_7g113490 31.429 105 72 0 205 309 115 219 4.64e-12 68.2
MS.gene049975.t1 MTR_1g013700 26.587 252 130 7 146 396 1 198 4.73e-12 67.4
MS.gene049975.t1 MTR_2g078740 34.188 117 75 1 195 311 47 161 4.77e-12 68.2
MS.gene049975.t1 MTR_2g078740 34.188 117 75 1 195 311 47 161 4.78e-12 68.2
MS.gene049975.t1 MTR_2g078740 34.188 117 75 1 195 311 47 161 4.85e-12 68.2
MS.gene049975.t1 MTR_4g019410 31.092 119 79 1 206 321 61 179 5.05e-12 67.8
MS.gene049975.t1 MTR_4g019410 30.579 121 81 1 206 323 61 181 7.47e-12 67.4
MS.gene049975.t1 MTR_3g096230 34.314 102 67 0 214 315 297 398 8.40e-12 67.0
MS.gene049975.t1 MTR_3g095620 31.304 115 76 1 211 322 72 186 1.14e-11 65.5
MS.gene049975.t1 MTR_3g096230 34.314 102 67 0 214 315 297 398 1.18e-11 67.0
MS.gene049975.t1 MTR_8g024600 28.105 153 60 2 236 388 7 109 1.47e-11 65.9
MS.gene049975.t1 MTR_1g100250 35.354 99 64 0 211 309 461 559 2.82e-11 65.9
MS.gene049975.t1 MTR_8g024100 25.714 140 100 2 188 323 38 177 4.59e-11 65.1
MS.gene049975.t1 MTR_0464s0040 31.897 116 78 1 190 305 39 153 4.74e-11 62.0
MS.gene049975.t1 MTR_5g059880 29.204 113 79 1 205 317 235 346 8.77e-11 63.9
MS.gene049975.t1 MTR_5g059940 29.091 110 77 1 208 317 171 279 9.48e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene049975.t1 AT4G14350 69.014 213 55 3 186 396 140 343 3.97e-98 303
MS.gene049975.t1 AT4G14350 69.014 213 55 3 186 396 140 343 4.59e-98 303
MS.gene049975.t1 AT4G14350 69.014 213 55 3 186 396 140 343 4.59e-98 303
MS.gene049975.t1 AT4G14350 69.014 213 55 3 186 396 140 343 4.59e-98 303
MS.gene049975.t1 AT3G23310 72.222 198 44 3 201 396 158 346 2.44e-95 296
MS.gene049975.t1 AT2G20470 66.837 196 54 2 201 396 162 346 6.24e-90 281
MS.gene049975.t1 AT2G20470 66.837 196 54 2 201 396 162 346 2.93e-89 281
MS.gene049975.t1 AT2G20470 66.837 196 54 2 201 396 162 346 2.93e-89 281
MS.gene049975.t1 AT1G03920 59.833 239 69 5 160 396 34 247 1.38e-87 273
MS.gene049975.t1 AT1G03920 59.414 239 70 4 160 396 147 360 8.91e-87 274
MS.gene049975.t1 AT1G03920 59.414 239 70 4 160 396 147 360 8.91e-87 274
MS.gene049975.t1 AT4G33080 59.615 208 71 4 196 396 125 326 5.57e-76 244
MS.gene049975.t1 AT4G33080 59.615 208 71 4 196 396 125 326 5.68e-76 245
MS.gene049975.t1 AT2G19400 62.121 198 64 3 204 396 146 337 1.05e-74 242
MS.gene049975.t1 AT1G30640 55.607 214 82 4 188 396 50 255 4.45e-74 238
MS.gene049975.t1 AT1G30640 55.607 214 82 4 188 396 143 348 1.62e-73 239
MS.gene049975.t1 AT1G30640 55.607 214 82 4 188 396 143 348 1.62e-73 239
MS.gene049975.t1 AT5G09890 61.224 196 64 4 204 396 143 329 1.31e-72 236
MS.gene049975.t1 AT5G09890 61.224 196 64 4 204 396 143 329 1.53e-72 236
MS.gene049975.t1 AT1G74920 81.746 126 23 0 80 205 309 434 6.38e-69 226
MS.gene049975.t1 AT1G74920 81.746 126 23 0 80 205 314 439 7.11e-69 226
MS.gene049975.t1 AT3G48170 73.846 130 34 0 76 205 310 439 8.98e-65 215
MS.gene049975.t1 AT5G62310 42.347 196 94 6 201 396 792 968 1.86e-34 136
MS.gene049975.t1 AT3G17850 38.384 198 99 4 201 396 920 1096 2.04e-32 130
MS.gene049975.t1 AT1G48490 37.755 196 97 3 201 396 866 1036 9.14e-32 128
MS.gene049975.t1 AT1G48490 37.755 196 97 3 201 396 866 1036 9.14e-32 128
MS.gene049975.t1 AT1G48490 37.755 196 97 3 201 396 866 1036 9.14e-32 128
MS.gene049975.t1 AT1G48490 37.755 196 97 3 201 396 867 1037 9.14e-32 128
MS.gene049975.t1 AT1G45160 37.563 197 100 4 201 397 708 881 4.01e-30 123
MS.gene049975.t1 AT1G45160 37.879 198 98 5 201 397 708 881 5.66e-30 122
MS.gene049975.t1 AT5G04510 37.821 156 93 1 161 316 46 197 1.52e-27 111
MS.gene049975.t1 AT5G04510 37.821 156 93 1 161 316 46 197 6.73e-27 111
MS.gene049975.t1 AT5G04510 37.821 156 93 1 161 316 46 197 7.88e-27 112
MS.gene049975.t1 AT3G24503 43.333 120 66 1 85 204 327 444 1.43e-26 111
MS.gene049975.t1 AT3G10540 37.821 156 93 1 161 316 47 198 4.19e-26 110
MS.gene049975.t1 AT3G08730 27.049 244 114 4 153 396 137 316 9.12e-24 103
MS.gene049975.t1 AT3G08730 27.049 244 114 4 153 396 137 316 9.12e-24 103
MS.gene049975.t1 AT3G08720 26.639 244 115 4 153 396 143 322 4.98e-23 100
MS.gene049975.t1 AT3G08720 26.639 244 115 4 153 396 143 322 4.98e-23 100
MS.gene049975.t1 AT3G08720 26.639 244 115 4 153 396 143 322 4.98e-23 100
MS.gene049975.t1 AT3G08720 26.639 244 115 4 153 396 143 322 4.98e-23 100
MS.gene049975.t1 AT1G79250 29.108 213 125 3 209 395 192 404 1.08e-22 100
MS.gene049975.t1 AT1G79250 29.108 213 125 3 209 395 192 404 1.08e-22 100
MS.gene049975.t1 AT1G79250 29.108 213 125 3 209 395 192 404 1.08e-22 100
MS.gene049975.t1 AT1G79250 29.108 213 125 3 209 395 192 404 1.08e-22 100
MS.gene049975.t1 AT1G79440 35.429 175 99 4 84 248 355 525 1.59e-22 99.8
MS.gene049975.t1 AT5G55910 30.804 224 122 6 204 396 150 371 6.19e-22 97.8
MS.gene049975.t1 AT5G55910 30.804 224 122 6 204 396 150 371 6.19e-22 97.8
MS.gene049975.t1 AT2G36350 29.237 236 128 7 195 395 591 822 3.37e-21 96.7
MS.gene049975.t1 AT3G52890 30.932 236 126 7 195 395 570 803 3.80e-21 96.3
MS.gene049975.t1 AT3G52890 30.932 236 126 7 195 395 570 803 3.80e-21 96.3
MS.gene049975.t1 AT3G52890 30.932 236 126 7 195 395 570 803 3.80e-21 96.3
MS.gene049975.t1 AT3G52890 30.932 236 126 7 195 395 570 803 3.80e-21 96.3
MS.gene049975.t1 AT3G27580 27.801 241 142 6 186 396 203 441 6.99e-21 95.1
MS.gene049975.t1 AT3G27580 27.801 241 142 6 186 396 203 441 6.99e-21 95.1
MS.gene049975.t1 AT1G16440 29.187 209 117 5 209 395 161 360 7.32e-21 94.7
MS.gene049975.t1 AT5G47750 29.018 224 125 7 204 396 232 452 1.74e-20 94.0
MS.gene049975.t1 AT4G26610 28.899 218 130 4 204 396 164 381 2.24e-20 93.2
MS.gene049975.t1 AT5G58140 29.442 197 94 4 211 395 625 788 5.66e-20 92.8
MS.gene049975.t1 AT5G58140 29.442 197 94 4 211 395 625 788 5.66e-20 92.8
MS.gene049975.t1 AT5G58140 29.442 197 94 4 211 395 625 788 5.66e-20 92.8
MS.gene049975.t1 AT5G58140 29.442 197 94 4 211 395 625 788 5.66e-20 92.8
MS.gene049975.t1 AT5G58140 29.442 197 94 4 211 395 625 788 5.66e-20 92.8
MS.gene049975.t1 AT5G58140 29.442 197 94 4 211 395 625 788 5.93e-20 92.8
MS.gene049975.t1 AT3G44610 26.772 254 147 8 172 396 95 338 8.83e-20 91.3
MS.gene049975.t1 AT2G44830 27.801 241 132 5 190 396 390 622 1.14e-19 91.7
MS.gene049975.t1 AT2G44830 27.801 241 132 5 190 396 390 622 1.14e-19 91.7
MS.gene049975.t1 AT2G44830 27.801 241 132 5 190 396 390 622 1.14e-19 91.7
MS.gene049975.t1 AT3G45780 32.000 200 101 5 204 395 704 876 1.42e-19 91.7
MS.gene049975.t1 AT3G45780 32.000 200 101 5 204 395 704 876 1.42e-19 91.7
MS.gene049975.t1 AT2G34650 28.934 197 133 3 204 395 121 315 6.31e-19 88.6
MS.gene049975.t1 AT3G20830 31.414 191 117 6 218 395 79 268 8.29e-19 88.2
MS.gene049975.t1 AT1G23800 35.897 117 73 1 89 205 364 478 1.01e-18 88.6
MS.gene049975.t1 AT5G03640 28.814 236 127 6 195 395 573 802 2.27e-18 87.8
MS.gene049975.t1 AT5G03640 28.814 236 127 6 195 395 573 802 2.27e-18 87.8
MS.gene049975.t1 AT4G13000 27.751 209 127 6 201 396 57 254 4.03e-18 85.5
MS.gene049975.t1 AT1G53700 25.455 220 152 4 178 395 114 323 4.52e-18 86.3
MS.gene049975.t1 AT3G12690 26.728 217 125 6 204 395 226 433 6.17e-18 86.3
MS.gene049975.t1 AT3G12690 26.728 217 125 6 204 395 226 433 6.17e-18 86.3
MS.gene049975.t1 AT3G12690 26.728 217 125 6 204 395 226 433 6.17e-18 86.3
MS.gene049975.t1 AT3G48000 34.188 117 75 1 89 205 368 482 8.10e-18 85.9
MS.gene049975.t1 AT4G24400 27.679 224 107 4 177 399 23 192 9.89e-18 84.7
MS.gene049975.t1 AT4G24400 27.358 212 104 2 177 388 23 184 1.17e-17 84.7
MS.gene049975.t1 AT3G14370 26.804 194 137 2 204 395 129 319 4.55e-17 83.2
MS.gene049975.t1 AT2G45490 34.375 128 82 1 197 324 56 181 5.78e-17 80.5
MS.gene049975.t1 AT5G40030 27.189 217 130 7 204 395 155 368 8.45e-17 82.4
MS.gene049975.t1 AT2G45490 34.375 128 82 1 197 324 56 181 9.29e-17 80.5
MS.gene049975.t1 AT1G30270 25.792 221 115 4 177 396 45 217 1.14e-16 82.0
MS.gene049975.t1 AT1G30270 25.792 221 115 4 177 396 45 217 1.27e-16 82.0
MS.gene049975.t1 AT2G26700 37.374 99 60 1 211 307 137 235 2.33e-16 81.3
MS.gene049975.t1 AT1G51170 29.082 196 123 5 212 395 76 267 2.52e-16 80.5
MS.gene049975.t1 AT1G01140 25.339 221 116 2 177 396 33 205 3.94e-16 80.1
MS.gene049975.t1 AT1G01140 25.339 221 116 2 177 396 33 205 4.00e-16 80.1
MS.gene049975.t1 AT1G01140 25.339 221 116 2 177 396 33 205 4.03e-16 80.1
MS.gene049975.t1 AT2G26980 26.244 221 114 4 177 396 28 200 9.05e-16 77.4
MS.gene049975.t1 AT2G26980 26.244 221 114 4 177 396 38 210 1.47e-15 78.6
MS.gene049975.t1 AT5G45810 27.928 222 106 6 179 399 44 212 1.48e-15 78.6
MS.gene049975.t1 AT5G45820 27.523 218 108 4 180 396 29 197 1.51e-15 78.6
MS.gene049975.t1 AT2G26980 26.244 221 114 4 177 396 28 200 1.52e-15 78.6
MS.gene049975.t1 AT2G26980 26.244 221 114 4 177 396 28 200 1.55e-15 78.2
MS.gene049975.t1 AT5G01810 28.302 212 102 4 186 396 35 197 2.04e-15 77.8
MS.gene049975.t1 AT4G14580 29.143 175 75 3 223 396 82 208 2.05e-15 77.8
MS.gene049975.t1 AT2G26980 26.244 221 114 4 177 396 28 200 2.40e-15 77.8
MS.gene049975.t1 AT5G25110 27.907 215 101 5 186 399 66 227 2.60e-15 77.8
MS.gene049975.t1 AT5G01810 28.302 212 102 4 186 396 35 197 3.05e-15 77.4
MS.gene049975.t1 AT5G01810 28.302 212 102 4 186 396 35 197 3.05e-15 77.4
MS.gene049975.t1 AT1G30270 30.247 162 64 4 236 396 7 120 3.45e-15 77.0
MS.gene049975.t1 AT5G58380 25.483 259 126 6 142 399 4 196 3.85e-15 77.4
MS.gene049975.t1 AT5G10930 28.358 201 90 5 200 399 50 197 9.34e-15 75.9
MS.gene049975.t1 AT1G49180 30.405 148 99 2 179 323 23 169 1.89e-14 74.7
MS.gene049975.t1 AT1G49180 30.405 148 99 2 179 323 23 169 2.37e-14 74.7
MS.gene049975.t1 AT1G29230 26.667 210 105 3 179 388 90 250 2.58e-14 75.1
MS.gene049975.t1 AT4G18700 27.835 194 91 4 195 388 58 202 2.65e-14 74.7
MS.gene049975.t1 AT5G18700 34.483 116 74 1 199 312 32 147 2.92e-14 75.5
MS.gene049975.t1 AT2G14170 35.593 118 72 2 80 194 410 526 3.46e-14 74.7
MS.gene049975.t1 AT4G30960 27.979 193 89 5 205 396 66 209 4.03e-14 73.9
MS.gene049975.t1 AT2G14170 37.168 113 67 2 85 194 415 526 4.47e-14 74.3
MS.gene049975.t1 AT5G35410 33.613 119 78 1 205 322 53 171 4.61e-14 73.6
MS.gene049975.t1 AT5G35410 33.333 120 79 1 205 323 53 172 4.82e-14 73.9
MS.gene049975.t1 AT2G14170 35.593 118 72 2 80 194 301 417 5.12e-14 73.9
MS.gene049975.t1 AT4G10730 31.405 121 79 2 190 308 54 172 5.56e-14 74.3
MS.gene049975.t1 AT4G10730 31.405 121 79 2 190 308 74 192 5.80e-14 74.3
MS.gene049975.t1 AT3G23000 27.273 220 101 6 187 396 41 211 6.26e-14 73.6
MS.gene049975.t1 AT3G66658 33.071 127 81 2 80 203 352 477 9.62e-14 73.2
MS.gene049975.t1 AT3G25250 27.551 196 126 5 211 396 72 261 9.73e-14 72.8
MS.gene049975.t1 AT1G54960 30.252 119 83 0 191 309 101 219 1.03e-13 73.2
MS.gene049975.t1 AT1G54960 30.252 119 83 0 191 309 101 219 1.03e-13 73.2
MS.gene049975.t1 AT3G66658 31.818 132 86 2 75 203 347 477 1.23e-13 72.8
MS.gene049975.t1 AT2G25090 24.242 198 99 3 201 388 44 200 1.29e-13 72.8
MS.gene049975.t1 AT4G24100 31.304 115 75 2 195 307 65 177 1.31e-13 73.2
MS.gene049975.t1 AT4G24100 31.304 115 75 2 195 307 81 193 1.42e-13 72.8
MS.gene049975.t1 AT4G24100 31.304 115 75 2 195 307 65 177 1.47e-13 72.8
MS.gene049975.t1 AT4G24100 31.304 115 75 2 195 307 81 193 1.49e-13 72.8
MS.gene049975.t1 AT1G54100 35.714 126 78 2 76 201 316 438 1.49e-13 72.4
MS.gene049975.t1 AT1G54100 35.714 126 78 2 76 201 316 438 1.49e-13 72.4
MS.gene049975.t1 AT3G01090 25.153 163 118 1 161 323 44 202 1.87e-13 72.4
MS.gene049975.t1 AT3G01090 25.153 163 118 1 161 323 21 179 2.04e-13 72.0
MS.gene049975.t1 AT3G01090 25.153 163 118 1 161 323 21 179 2.04e-13 72.0
MS.gene049975.t1 AT1G09000 25.714 175 125 3 137 309 49 220 2.53e-13 72.0
MS.gene049975.t1 AT1G09000 25.714 175 125 3 137 309 49 220 3.25e-13 71.6
MS.gene049975.t1 AT2G30360 24.737 190 94 3 208 396 67 208 3.58e-13 71.2
MS.gene049975.t1 AT5G21222 24.771 218 115 4 180 396 30 199 6.34e-13 70.9
MS.gene049975.t1 AT5G21222 24.771 218 115 4 180 396 30 199 6.34e-13 70.9
MS.gene049975.t1 AT5G21222 24.771 218 115 4 180 396 30 199 6.34e-13 70.9
MS.gene049975.t1 AT5G21222 24.771 218 115 4 180 396 30 199 6.34e-13 70.9
MS.gene049975.t1 AT3G29160 23.313 163 121 1 161 323 22 180 6.59e-13 70.1
MS.gene049975.t1 AT5G21326 25.123 203 103 3 195 396 45 199 7.52e-13 70.1
MS.gene049975.t1 AT5G14720 31.034 116 76 2 195 308 48 161 9.02e-13 70.5
MS.gene049975.t1 AT5G14720 31.034 116 76 2 195 308 48 161 9.02e-13 70.5
MS.gene049975.t1 AT3G29160 23.313 163 121 1 161 323 22 180 1.25e-12 69.7
MS.gene049975.t1 AT3G29160 23.313 163 121 1 161 323 22 180 1.25e-12 69.7
MS.gene049975.t1 AT3G17510 25.893 224 113 5 177 399 34 205 1.76e-12 68.9
MS.gene049975.t1 AT3G61960 25.143 175 123 3 152 323 3 172 4.99e-12 68.2
MS.gene049975.t1 AT3G61960 25.143 175 123 3 152 323 3 172 5.12e-12 68.2
MS.gene049975.t1 AT1G70430 31.897 116 75 2 195 308 48 161 6.12e-12 67.8
MS.gene049975.t1 AT1G70430 31.897 116 75 2 195 308 48 161 6.62e-12 67.8
MS.gene049975.t1 AT1G70430 31.897 116 75 2 195 308 48 161 6.82e-12 67.4
MS.gene049975.t1 AT2G25880 32.381 105 70 1 203 306 64 168 7.26e-12 66.2
MS.gene049975.t1 AT2G25880 32.381 105 70 1 203 306 77 181 7.91e-12 66.2
MS.gene049975.t1 AT4G32830 32.381 105 70 1 203 306 70 174 8.02e-12 65.9
MS.gene049975.t1 AT2G34180 32.558 129 86 1 179 307 73 200 9.21e-12 67.0
MS.gene049975.t1 AT2G25880 32.381 105 70 1 203 306 125 229 9.41e-12 66.2
MS.gene049975.t1 AT2G37840 28.926 121 83 1 206 323 54 174 1.29e-11 67.0
MS.gene049975.t1 AT1G53570 34.286 105 69 0 205 309 258 362 1.58e-11 66.2
MS.gene049975.t1 AT1G53570 34.454 119 75 1 191 309 247 362 1.62e-11 66.2
MS.gene049975.t1 AT1G53570 34.454 119 75 1 191 309 247 362 1.73e-11 66.2
MS.gene049975.t1 AT1G53570 34.454 119 75 1 191 309 247 362 1.73e-11 66.2
MS.gene049975.t1 AT1G53570 34.286 105 69 0 205 309 258 362 1.78e-11 66.2
MS.gene049975.t1 AT1G53570 34.286 105 69 0 205 309 258 362 1.79e-11 66.2
MS.gene049975.t1 AT3G15220 38.202 89 55 0 223 311 73 161 2.36e-11 65.9
MS.gene049975.t1 AT1G63700 31.429 105 72 0 205 309 444 548 3.21e-11 65.9
MS.gene049975.t1 AT1G63700 31.429 105 72 0 205 309 444 548 3.21e-11 65.9
MS.gene049975.t1 AT1G66750 35.238 105 68 0 211 315 60 164 7.22e-11 63.5

Find 66 sgRNAs with CRISPR-Local

Find 298 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTTGGAAAGAAGAAGTATT+TGG 0.232708 5.3:+52234134 MS.gene049975:CDS
TGACTACTTCCATGCAAATT+TGG 0.235483 5.3:+52234117 MS.gene049975:CDS
CACGTGAAATTATCAGATTT+TGG 0.253070 5.3:+52237133 MS.gene049975:CDS
GTCAGAGTTGCTTGAAACTA+TGG 0.256850 5.3:+52233080 MS.gene049975:CDS
CCAGTTGCTGTTGTTGTGAT+TGG 0.300638 5.3:-52237285 None:intergenic
TTCAATTCATGCACGGAATC+TGG 0.312219 5.3:-52232893 None:intergenic
ATGTTTATGAATAGACTCTA+TGG 0.331837 5.3:-52236823 None:intergenic
CATGCCCGACAACTTGCTTC+TGG 0.340707 5.3:+52237099 MS.gene049975:CDS
GTGATTGGTATAATAGTATA+TGG 0.352774 5.3:+52237807 MS.gene049975:CDS
GATGAAGCTAAATTCTATAT+CGG 0.354953 5.3:+52236786 MS.gene049975:CDS
ATAAACATAATTATATTCAT+AGG 0.369736 5.3:+52236838 MS.gene049975:CDS
AAAAGACTGCAGTAACCTTC+AGG 0.370471 5.3:+52237192 MS.gene049975:CDS
ATCCCTTGGAAGAAGGTTGC+AGG 0.381818 5.3:+52233445 MS.gene049975:CDS
GCTAGACTGCAGTAACCTTC+AGG 0.390289 5.3:+52237168 MS.gene049975:CDS
ATGAAGCTAAATTCTATATC+GGG 0.407900 5.3:+52236787 MS.gene049975:CDS
CCTCTCTTCAGAATAACTTC+TGG 0.412241 5.3:-52237770 None:intergenic
AAGCAAGTTCATCACTTTGA+AGG 0.415965 5.3:-52237252 None:intergenic
CCAATCACAACAACAGCAAC+TGG 0.416983 5.3:+52237285 MS.gene049975:CDS
CATCAAAATTTCAGATCCCT+TGG 0.421001 5.3:+52233431 MS.gene049975:CDS
CGAGTATTTATATCTCATAA+TGG 0.455404 5.3:+52236704 MS.gene049975:CDS
ATTTCAGATCCCTTGGAAGA+AGG 0.459280 5.3:+52233438 MS.gene049975:CDS
GTCCTCTACAGCTATGGCTT+AGG 0.463601 5.3:+52234312 MS.gene049975:intron
TTGGAAGAAGGTTGCAGGCT+AGG 0.466614 5.3:+52233450 MS.gene049975:CDS
GAGTGTTCCAACCGTAGAAT+AGG 0.473047 5.3:-52237735 None:intergenic
ACCTGTTGTTAGTGAAGGGC+AGG 0.473564 5.3:+52233473 MS.gene049975:CDS
TGCTATCAACTTCTGCAAGA+AGG 0.478344 5.3:-52236644 None:intergenic
ACCTGCCCTTCACTAACAAC+AGG 0.480135 5.3:-52233474 None:intergenic
TGCTGTTGTTGTGATTGGTT+AGG 0.484482 5.3:-52237280 None:intergenic
TCTAATGGAGTTAACATAAG+TGG 0.486303 5.3:+52237226 MS.gene049975:CDS
GTCACATCAGTTATGATGGT+TGG 0.495328 5.3:-52234098 None:intergenic
TTCTTCTTTCCAAATTTGCA+TGG 0.496084 5.3:-52234126 None:intergenic
CAATGGCAGCATCTAAAGAA+AGG 0.502314 5.3:+52234062 MS.gene049975:intron
AACAGCAACTGGAGCATTCG+CGG 0.503673 5.3:+52237296 MS.gene049975:CDS
AAGATGTGAGCGTGTAACTA+AGG 0.508552 5.3:+52234362 MS.gene049975:CDS
CTATCCAGAAGCAAGTTGTC+GGG 0.515263 5.3:-52237103 None:intergenic
TAAATACTCGTCATCTTGAA+AGG 0.518616 5.3:-52236691 None:intergenic
CAACGTCATCATATCTCCAC+CGG 0.521802 5.3:-52236736 None:intergenic
GATATTGCAGACCTATTCTA+CGG 0.522525 5.3:+52237724 MS.gene049975:intron
TCTATCCAGAAGCAAGTTGT+CGG 0.524432 5.3:-52237104 None:intergenic
AGTAGTCACATCAGTTATGA+TGG 0.526637 5.3:-52234102 None:intergenic
TTGCAGACCTATTCTACGGT+TGG 0.534089 5.3:+52237728 MS.gene049975:intron
TAGCCTGCAACCTTCTTCCA+AGG 0.540093 5.3:-52233448 None:intergenic
GTTATTCTGAAGAGAGGGTA+TGG 0.540943 5.3:+52237776 MS.gene049975:CDS
CTAGGACCTGTTGTTAGTGA+AGG 0.541728 5.3:+52233468 MS.gene049975:CDS
CTCATAATGGAGTATCTACC+CGG 0.543468 5.3:+52236717 MS.gene049975:CDS
AACTTGCTTCTGGATAGAAA+TGG 0.545939 5.3:+52237109 MS.gene049975:CDS
TACTTACATGTACAATAAGA+CGG 0.551715 5.3:-52233143 None:intergenic
GGTATGGCGTGGAATGTGAT+TGG 0.559029 5.3:+52237792 MS.gene049975:CDS
GACTGGTGGGTCTCGACCAG+AGG 0.561492 5.3:+52233959 MS.gene049975:CDS
GTCTCGAACGCTAAGAGTGA+GGG 0.574738 5.3:+52233924 MS.gene049975:CDS
ACTTACATGTACAATAAGAC+GGG 0.586490 5.3:-52233142 None:intergenic
TTCATGCACGGAATCTGGAA+TGG 0.586797 5.3:-52232888 None:intergenic
TAGGACCTGTTGTTAGTGAA+GGG 0.592104 5.3:+52233469 MS.gene049975:CDS
CCAGAAGTTATTCTGAAGAG+AGG 0.595321 5.3:+52237770 MS.gene049975:CDS
TAGATCAATAGCTTCTTCCT+CGG 0.596377 5.3:-52234186 None:intergenic
AGCCTGCAACCTTCTTCCAA+GGG 0.599460 5.3:-52233447 None:intergenic
CAGAAGTTATTCTGAAGAGA+GGG 0.602815 5.3:+52237771 MS.gene049975:CDS
TGTCTCGAACGCTAAGAGTG+AGG 0.614021 5.3:+52233923 MS.gene049975:CDS
TTGAATATATCAAATCTGAA+AGG 0.615218 5.3:+52236619 MS.gene049975:CDS
ATATGATGACGTTGCTGATG+CGG 0.617376 5.3:+52236745 MS.gene049975:CDS
ATATTGCTTCAATTCATGCA+CGG 0.618950 5.3:-52232900 None:intergenic
TGAAGGTTACTGCAGTCTAG+CGG 0.630065 5.3:-52237166 None:intergenic
TGAAGCTAAATTCTATATCG+GGG 0.655322 5.3:+52236788 MS.gene049975:CDS
AACGTCATCATATCTCCACC+GGG 0.657380 5.3:-52236735 None:intergenic
TCTGAAGAGAGGGTATGGCG+TGG 0.686438 5.3:+52237781 MS.gene049975:CDS
ATAATGGAGTATCTACCCGG+TGG 0.717919 5.3:+52236720 MS.gene049975:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATATTAGTAAAATTCAT+TGG + chr5.3:52235862-52235881 MS.gene049975:intron 10.0%
!! AATATATAGAAAATATATGT+TGG + chr5.3:52235925-52235944 MS.gene049975:intron 10.0%
!! AGAAAAATAAATAAAAAGAT+AGG - chr5.3:52234627-52234646 None:intergenic 10.0%
!! ATAAACATAATTATATTCAT+AGG + chr5.3:52236838-52236857 MS.gene049975:CDS 10.0%
!!! TTTGTTTAATATTTTTAACA+GGG + chr5.3:52235065-52235084 MS.gene049975:intron 10.0%
!!! TTTTGTTTAATATTTTTAAC+AGG + chr5.3:52235064-52235083 MS.gene049975:intron 10.0%
!!! TTTTTATTATAACTGAAAAA+AGG - chr5.3:52237496-52237515 None:intergenic 10.0%
!! ATTTACATCATATATCAATT+TGG + chr5.3:52237595-52237614 MS.gene049975:intron 15.0%
!! GTAATTTGATGAAATATTTA+TGG + chr5.3:52235671-52235690 MS.gene049975:intron 15.0%
!! TAAAATACTCTTATTATTTC+AGG + chr5.3:52233359-52233378 MS.gene049975:intron 15.0%
!! TAGCAAACTTTATTATAAAA+CGG + chr5.3:52237394-52237413 MS.gene049975:intron 15.0%
!! TTTACATCATATATCAATTT+GGG + chr5.3:52237596-52237615 MS.gene049975:intron 15.0%
!!! AATAAAATTAAAGTACCATA+GGG - chr5.3:52235540-52235559 None:intergenic 15.0%
!!! ATTATTTTCTTTTACTTATC+AGG + chr5.3:52236574-52236593 MS.gene049975:intron 15.0%
!!! TAATAAAATTAAAGTACCAT+AGG - chr5.3:52235541-52235560 None:intergenic 15.0%
!!! TCTTTTTATTTATTTTTCTC+TGG + chr5.3:52234628-52234647 MS.gene049975:intron 15.0%
!!! TTGTTTAATATTTTTAACAG+GGG + chr5.3:52235066-52235085 MS.gene049975:intron 15.0%
!! AAAAGAAACCCATAATTATA+AGG + chr5.3:52234682-52234701 MS.gene049975:intron 20.0%
!! AAAGTAAATATTCACTCAAA+GGG - chr5.3:52233007-52233026 None:intergenic 20.0%
!! AAATAATTCAACATAATGGT+TGG + chr5.3:52232976-52232995 MS.gene049975:intron 20.0%
!! AAATTGGAATTATACATGAT+AGG + chr5.3:52234849-52234868 MS.gene049975:intron 20.0%
!! AATAAAAAGATAGGCATTTA+AGG - chr5.3:52234618-52234637 None:intergenic 20.0%
!! AATTGGAATTATACATGATA+GGG + chr5.3:52234850-52234869 MS.gene049975:intron 20.0%
!! AGTAATTGTAAAGTTCAATA+TGG - chr5.3:52235617-52235636 None:intergenic 20.0%
!! ATTAAACAAAATCAGACTTA+AGG - chr5.3:52235055-52235074 None:intergenic 20.0%
!! CAAAACATAATCAATTATCA+TGG - chr5.3:52234036-52234055 None:intergenic 20.0%
!! CAAGAAAACAACTAAATAAT+TGG + chr5.3:52234405-52234424 MS.gene049975:intron 20.0%
!! CATATTCAATGAAAATGTAT+TGG + chr5.3:52233607-52233626 MS.gene049975:intron 20.0%
!! CTAAAAACTAACATGAATAA+GGG + chr5.3:52235179-52235198 MS.gene049975:intron 20.0%
!! GAAAAAAGAAAAAATGCAAA+TGG - chr5.3:52233235-52233254 None:intergenic 20.0%
!! TATGATTACTTTATTCAAAG+CGG + chr5.3:52237464-52237483 MS.gene049975:intron 20.0%
!! TATTCTGTATTCACATTATA+TGG + chr5.3:52233875-52233894 MS.gene049975:intron 20.0%
!! TCTAAAAACTAACATGAATA+AGG + chr5.3:52235178-52235197 MS.gene049975:intron 20.0%
!! TGTATGTATAATTTATGAGA+AGG + chr5.3:52233725-52233744 MS.gene049975:intron 20.0%
!! TTGAATATATCAAATCTGAA+AGG + chr5.3:52236619-52236638 MS.gene049975:CDS 20.0%
!!! GTTAATTTATTTTGACCATT+TGG + chr5.3:52236000-52236019 MS.gene049975:intron 20.0%
!!! TAGCAACATAATTTTTGAAT+AGG + chr5.3:52233388-52233407 MS.gene049975:intron 20.0%
!!! TATATATTTGAGTTTGATCA+AGG - chr5.3:52235913-52235932 None:intergenic 20.0%
!!! TCATAATTCTTTTTTATGAC+AGG + chr5.3:52232832-52232851 MS.gene049975:intron 20.0%
! AAAGAGAGAATAGTCTTTAA+AGG - chr5.3:52237641-52237660 None:intergenic 25.0%
! AAATCAAATAAACACACTAC+CGG - chr5.3:52235303-52235322 None:intergenic 25.0%
! AAATTATGACTATGATCCTA+AGG + chr5.3:52235214-52235233 MS.gene049975:intron 25.0%
! AATTATCAGTGTTAGATTGT+AGG + chr5.3:52236972-52236991 MS.gene049975:intron 25.0%
! AGAAAGAAAACTACATTATG+TGG - chr5.3:52233784-52233803 None:intergenic 25.0%
! AGACTTCACCTTATAATTAT+GGG - chr5.3:52234693-52234712 None:intergenic 25.0%
! AGTGATTTCGTTGAAAATAA+CGG - chr5.3:52236942-52236961 None:intergenic 25.0%
! ATAATGTCTCTGTAAAACAA+TGG + chr5.3:52235254-52235273 MS.gene049975:intron 25.0%
! ATAATTTATGAGAAGGAAGA+AGG + chr5.3:52233732-52233751 MS.gene049975:intron 25.0%
! ATATATGTTGGAAACAGTTT+AGG + chr5.3:52235937-52235956 MS.gene049975:intron 25.0%
! ATATTCATAAGCTATACTTG+AGG - chr5.3:52236193-52236212 None:intergenic 25.0%
! ATGAAGCTAAATTCTATATC+GGG + chr5.3:52236787-52236806 MS.gene049975:CDS 25.0%
! ATGTTTATGAATAGACTCTA+TGG - chr5.3:52236826-52236845 None:intergenic 25.0%
! ATTATCAGTGTTAGATTGTA+GGG + chr5.3:52236973-52236992 MS.gene049975:intron 25.0%
! ATTGCGAAAGAGTTAAATAA+TGG + chr5.3:52236447-52236466 MS.gene049975:intron 25.0%
! CAAAGTAAATATTCACTCAA+AGG - chr5.3:52233008-52233027 None:intergenic 25.0%
! CATTATTCTTTCGTTATGTT+TGG + chr5.3:52237522-52237541 MS.gene049975:intron 25.0%
! CGAGTATTTATATCTCATAA+TGG + chr5.3:52236704-52236723 MS.gene049975:CDS 25.0%
! GAACTTTACAATTACTATCT+AGG + chr5.3:52235621-52235640 MS.gene049975:intron 25.0%
! GATGAAGCTAAATTCTATAT+CGG + chr5.3:52236786-52236805 MS.gene049975:CDS 25.0%
! GCTACAATCTTATACTAAAT+AGG - chr5.3:52236900-52236919 None:intergenic 25.0%
! GCTCAAATAATTCAACATAA+TGG + chr5.3:52232972-52232991 MS.gene049975:intron 25.0%
! GGTATCTAAGTTATATACTT+TGG + chr5.3:52234290-52234309 MS.gene049975:intron 25.0%
! GTCATATACAATTTCTGATT+AGG + chr5.3:52235803-52235822 MS.gene049975:intron 25.0%
! GTGATTGGTATAATAGTATA+TGG + chr5.3:52237807-52237826 MS.gene049975:CDS 25.0%
! TACTTACATGTACAATAAGA+CGG - chr5.3:52233146-52233165 None:intergenic 25.0%
! TAGACTTCACCTTATAATTA+TGG - chr5.3:52234694-52234713 None:intergenic 25.0%
! TAGGAAAATGAGTTAGAAAA+AGG - chr5.3:52236166-52236185 None:intergenic 25.0%
! TAGGTAGACATTAGAAAAAA+GGG + chr5.3:52235822-52235841 MS.gene049975:intron 25.0%
! TATATGTTGGAAACAGTTTA+GGG + chr5.3:52235938-52235957 MS.gene049975:intron 25.0%
! TGATTCTAAACATATTTGTC+TGG + chr5.3:52233829-52233848 MS.gene049975:intron 25.0%
! TTAGGATCATAGTCATAATT+TGG - chr5.3:52235215-52235234 None:intergenic 25.0%
! TTAGGTAGACATTAGAAAAA+AGG + chr5.3:52235821-52235840 MS.gene049975:intron 25.0%
! TTCTGAACTTTGTAAAGTAA+AGG + chr5.3:52233550-52233569 MS.gene049975:intron 25.0%
! TTGATGAAATATTTATGGCA+TGG + chr5.3:52235676-52235695 MS.gene049975:intron 25.0%
!! ACATAATGTAGTTTTCTTTC+TGG + chr5.3:52233783-52233802 MS.gene049975:intron 25.0%
!! ATTATGTTTTGCAAATGCAA+TGG + chr5.3:52234045-52234064 MS.gene049975:intron 25.0%
!! CAGCATGTTATATATGTTTT+TGG - chr5.3:52235704-52235723 None:intergenic 25.0%
!! TTATAACTGAAAAAAGGTGT+AGG - chr5.3:52237490-52237509 None:intergenic 25.0%
!! TTTTCTTTTTTCTGCGTATA+TGG + chr5.3:52233243-52233262 MS.gene049975:intron 25.0%
!! TTTTGAATAGGATGATGAAA+TGG + chr5.3:52233400-52233419 MS.gene049975:intron 25.0%
!!! AGTTATTGAACTTATTTTCC+TGG + chr5.3:52236331-52236350 MS.gene049975:intron 25.0%
!!! ATGGTTCTACATTTTGAATA+TGG + chr5.3:52233099-52233118 MS.gene049975:CDS 25.0%
!!! ATTTGGAAAGAAGAAGTATT+TGG + chr5.3:52234134-52234153 MS.gene049975:CDS 25.0%
!!! GTGCTTTTATGTTTTTGATT+AGG + chr5.3:52236596-52236615 MS.gene049975:intron 25.0%
!!! TATTCTCTCTTTTGATTGTA+TGG + chr5.3:52237649-52237668 MS.gene049975:intron 25.0%
!!! TCTTTCGTGATATTTTTGTT+TGG + chr5.3:52237553-52237572 MS.gene049975:intron 25.0%
!!! TTATTTTGACCATTTGGTAA+AGG + chr5.3:52236006-52236025 MS.gene049975:intron 25.0%
!!! TTTCTTTTTTCTGCGTATAT+GGG + chr5.3:52233244-52233263 MS.gene049975:intron 25.0%
AAAATTGAAGCATGATGGTT+AGG - chr5.3:52235339-52235358 None:intergenic 30.0%
AAACTAACATGAATAAGGGT+TGG + chr5.3:52235183-52235202 MS.gene049975:intron 30.0%
AAATTACCCTATAAGAGTCA+AGG - chr5.3:52235658-52235677 None:intergenic 30.0%
AACTAACATGAATAAGGGTT+GGG + chr5.3:52235184-52235203 MS.gene049975:intron 30.0%
AAGAAGCAAAACTAATTGAG+TGG - chr5.3:52235573-52235592 None:intergenic 30.0%
AATGAGTTAGAAAAAGGCTA+TGG - chr5.3:52236160-52236179 None:intergenic 30.0%
ACAGTCAATAAAGCTATGAA+CGG + chr5.3:52234795-52234814 MS.gene049975:intron 30.0%
ACTTACATGTACAATAAGAC+GGG - chr5.3:52233145-52233164 None:intergenic 30.0%
AGAAGCAAAACTAATTGAGT+GGG - chr5.3:52235572-52235591 None:intergenic 30.0%
ATATTGCTTCAATTCATGCA+CGG - chr5.3:52232903-52232922 None:intergenic 30.0%
CAGGAAAAAGACTTATCTAA+TGG + chr5.3:52237211-52237230 MS.gene049975:CDS 30.0%
GAACTTTGTAAAGTAAAGGA+CGG + chr5.3:52233554-52233573 MS.gene049975:intron 30.0%
GGGTTATATGTTGTGTTTAA+GGG + chr5.3:52236043-52236062 MS.gene049975:intron 30.0%
GGTAGTGTGTTTATTTGATT+TGG + chr5.3:52235302-52235321 MS.gene049975:intron 30.0%
GTTAAGCAACACAAAGAAAA+TGG + chr5.3:52235498-52235517 MS.gene049975:intron 30.0%
GTTCAAAAATTGAAGCATGA+TGG - chr5.3:52235344-52235363 None:intergenic 30.0%
TAAATACTCGTCATCTTGAA+AGG - chr5.3:52236694-52236713 None:intergenic 30.0%
TAGAACTTTGTCAGACAAAT+TGG + chr5.3:52233293-52233312 MS.gene049975:intron 30.0%
TCATACAATGTGCATTGAAT+AGG - chr5.3:52236362-52236381 None:intergenic 30.0%
TCTAATGGAGTTAACATAAG+TGG + chr5.3:52237226-52237245 MS.gene049975:CDS 30.0%
TCTGACATTAATACAGGTTT+AGG - chr5.3:52234987-52235006 None:intergenic 30.0%
TGAAGCTAAATTCTATATCG+GGG + chr5.3:52236788-52236807 MS.gene049975:CDS 30.0%
TTCTTCTTTCCAAATTTGCA+TGG - chr5.3:52234129-52234148 None:intergenic 30.0%
TTGATAGAAGTCTGTCATAA+TGG - chr5.3:52235368-52235387 None:intergenic 30.0%
! AAACAGACTATTCTTTTGCA+TGG - chr5.3:52236310-52236329 None:intergenic 30.0%
! AAAGTTTTTACACACAGAAC+AGG - chr5.3:52234161-52234180 None:intergenic 30.0%
! AATTCCAATTTTACCATGCA+AGG - chr5.3:52234840-52234859 None:intergenic 30.0%
! ATTTAAGGCCGAAATAGTAT+GGG + chr5.3:52234471-52234490 MS.gene049975:intron 30.0%
! CAACGAAATCACTATTGTTT+TGG + chr5.3:52236949-52236968 MS.gene049975:intron 30.0%
! CACGTGAAATTATCAGATTT+TGG + chr5.3:52237133-52237152 MS.gene049975:CDS 30.0%
! TAGATAAGTCTTTTTCCTGA+AGG - chr5.3:52237210-52237229 None:intergenic 30.0%
! TGTAAAAACTTTTAACACCG+AGG + chr5.3:52234169-52234188 MS.gene049975:CDS 30.0%
! TTCATCTGTATACTCTTTTC+CGG + chr5.3:52234254-52234273 MS.gene049975:intron 30.0%
!! GATACATATCATAGTTTTGC+AGG - chr5.3:52235160-52235179 None:intergenic 30.0%
!! TATTGAACTTATTTTCCTGG+TGG + chr5.3:52236334-52236353 MS.gene049975:intron 30.0%
!! TTATTTTTCTCTGGATGAAG+AGG + chr5.3:52234637-52234656 MS.gene049975:intron 30.0%
!!! GAAAGAAATGTGTTTTTTCC+TGG + chr5.3:52235884-52235903 MS.gene049975:intron 30.0%
AAATCAGAGATGCTTAGTAG+AGG + chr5.3:52236514-52236533 MS.gene049975:intron 35.0%
AAGCAAGTTCATCACTTTGA+AGG - chr5.3:52237255-52237274 None:intergenic 35.0%
ACATGAACCTTGACTCTTAT+AGG + chr5.3:52235648-52235667 MS.gene049975:intron 35.0%
ACCTGTATTAATGTCAGATC+TGG + chr5.3:52234989-52235008 MS.gene049975:intron 35.0%
ACTAAGGTGAGACTGATTAT+AGG + chr5.3:52234378-52234397 MS.gene049975:intron 35.0%
ACTCAATGACCTACTTATTG+CGG - chr5.3:52235439-52235458 None:intergenic 35.0%
AGCATCTCTGATTTAACTCA+CGG - chr5.3:52236508-52236527 None:intergenic 35.0%
AGTAGTCACATCAGTTATGA+TGG - chr5.3:52234105-52234124 None:intergenic 35.0%
ATAAAGCTATGAACGGATCA+TGG + chr5.3:52234802-52234821 MS.gene049975:intron 35.0%
ATGTTTCCTTGGTCTGAATT+TGG + chr5.3:52234897-52234916 MS.gene049975:intron 35.0%
ATTTGGCATAAAGGGATAGT+TGG + chr5.3:52234914-52234933 MS.gene049975:intron 35.0%
CATAAAGGGATAGTTGGATT+GGG + chr5.3:52234920-52234939 MS.gene049975:intron 35.0%
CATCAAAATTTCAGATCCCT+TGG + chr5.3:52233431-52233450 MS.gene049975:CDS 35.0%
CATGAACCTTGACTCTTATA+GGG + chr5.3:52235649-52235668 MS.gene049975:intron 35.0%
CATGAATACCTCTGAATGAT+CGG - chr5.3:52237029-52237048 None:intergenic 35.0%
CATTCCTTGCATGGTAAAAT+TGG + chr5.3:52234833-52234852 MS.gene049975:intron 35.0%
CCATAGGGAAAGAAACTAAA+TGG - chr5.3:52235525-52235544 None:intergenic 35.0%
CCATTCAGAATAGACTTCAA+TGG - chr5.3:52235416-52235435 None:intergenic 35.0%
CCATTGAAGTCTATTCTGAA+TGG + chr5.3:52235413-52235432 MS.gene049975:intron 35.0%
CTTATTTCAGTAAGCTCTCT+AGG + chr5.3:52236222-52236241 MS.gene049975:intron 35.0%
CTTTCGTTATGTTTGGACTT+CGG + chr5.3:52237529-52237548 MS.gene049975:intron 35.0%
GACTTAAGGTCAAATAAGAC+AGG - chr5.3:52235041-52235060 None:intergenic 35.0%
GACTTCAATGGAATCATAGT+AGG - chr5.3:52235404-52235423 None:intergenic 35.0%
GATATTGCAGACCTATTCTA+CGG + chr5.3:52237724-52237743 MS.gene049975:intron 35.0%
GCAATTGACCCATACTATTT+CGG - chr5.3:52234482-52234501 None:intergenic 35.0%
GGAGATGAAAAACTTTGATG+TGG + chr5.3:52235781-52235800 MS.gene049975:intron 35.0%
GGGGTTATATGTTGTGTTTA+AGG + chr5.3:52236042-52236061 MS.gene049975:intron 35.0%
GTCACTATAGATAGATGTTG+AGG - chr5.3:52232806-52232825 None:intergenic 35.0%
GTTGTGTTTAAGGGCTTATT+TGG + chr5.3:52236052-52236071 MS.gene049975:intron 35.0%
GTTTAAGGGCTTATTTGGAT+TGG + chr5.3:52236057-52236076 MS.gene049975:intron 35.0%
TAGATAGATGTTGAGGTGAT+TGG - chr5.3:52232799-52232818 None:intergenic 35.0%
TAGATCAATAGCTTCTTCCT+CGG - chr5.3:52234189-52234208 None:intergenic 35.0%
TAGGTCATTGAGTTCTATGA+GGG + chr5.3:52235446-52235465 MS.gene049975:intron 35.0%
TATGACTATGATCCTAAGGT+GGG + chr5.3:52235218-52235237 MS.gene049975:intron 35.0%
TCATGTATTCAGCAGAGTAA+GGG + chr5.3:52232936-52232955 MS.gene049975:intron 35.0%
TCCTGATTGCAAAGAGATAT+GGG + chr5.3:52235760-52235779 MS.gene049975:intron 35.0%
TCTCTGTAAAACAATGGAAC+TGG + chr5.3:52235260-52235279 MS.gene049975:intron 35.0%
TGACTACTTCCATGCAAATT+TGG + chr5.3:52234117-52234136 MS.gene049975:CDS 35.0%
TGAGCTAGCACAAAAGTTTA+CGG - chr5.3:52233191-52233210 None:intergenic 35.0%
TGATAGGGATTAACATGTGT+CGG + chr5.3:52234865-52234884 MS.gene049975:intron 35.0%
TGGTCTGAATTTGGCATAAA+GGG + chr5.3:52234906-52234925 MS.gene049975:intron 35.0%
TTATGACTATGATCCTAAGG+TGG + chr5.3:52235217-52235236 MS.gene049975:intron 35.0%
TTGGTCTGAATTTGGCATAA+AGG + chr5.3:52234905-52234924 MS.gene049975:intron 35.0%
TTTATGCCAAATTCAGACCA+AGG - chr5.3:52234906-52234925 None:intergenic 35.0%
TTTGACCATTTGGTAAAGGA+TGG + chr5.3:52236010-52236029 MS.gene049975:intron 35.0%
! AACTTGCTTCTGGATAGAAA+TGG + chr5.3:52237109-52237128 MS.gene049975:CDS 35.0%
! AGAAAGCATAATCATACCTC+TGG - chr5.3:52233978-52233997 None:intergenic 35.0%
! ATGTCAATTTGCTTGTACCA+TGG + chr5.3:52233653-52233672 MS.gene049975:intron 35.0%
! CAGAAGTTATTCTGAAGAGA+GGG + chr5.3:52237771-52237790 MS.gene049975:CDS 35.0%
! CATTTAAGGCCGAAATAGTA+TGG + chr5.3:52234470-52234489 MS.gene049975:intron 35.0%
! CCATTTAGTTTCTTTCCCTA+TGG + chr5.3:52235522-52235541 MS.gene049975:intron 35.0%
! TGTCAGACAAATTGGTAGTT+GGG + chr5.3:52233301-52233320 MS.gene049975:intron 35.0%
! TTGTCAGACAAATTGGTAGT+TGG + chr5.3:52233300-52233319 MS.gene049975:intron 35.0%
!! ACATATCATAGTTTTGCAGG+AGG - chr5.3:52235157-52235176 None:intergenic 35.0%
!! ATGTAGTTTTCTTTCTGGTC+AGG + chr5.3:52233788-52233807 MS.gene049975:intron 35.0%
!! ATTGGTAGTTGGGATTTTGT+CGG + chr5.3:52233311-52233330 MS.gene049975:intron 35.0%
AAAAGACTGCAGTAACCTTC+AGG + chr5.3:52237192-52237211 MS.gene049975:CDS 40.0%
AACAGTTTAGGGATAACTGC+AGG + chr5.3:52235949-52235968 MS.gene049975:intron 40.0%
AAGATGTGAGCGTGTAACTA+AGG + chr5.3:52234362-52234381 MS.gene049975:CDS 40.0%
AAGCTATACTTGAGGAGCTT+AGG - chr5.3:52236185-52236204 None:intergenic 40.0%
AATATATGCCTTCCCACCTT+AGG - chr5.3:52235233-52235252 None:intergenic 40.0%
ACAAAAGTTTACGGAAGGAG+TGG - chr5.3:52233182-52233201 None:intergenic 40.0%
ACAGTTTAGGGATAACTGCA+GGG + chr5.3:52235950-52235969 MS.gene049975:intron 40.0%
ACCATTTGGTAAAGGATGGA+AGG + chr5.3:52236014-52236033 MS.gene049975:intron 40.0%
AGGTCATTGAGTTCTATGAG+GGG + chr5.3:52235447-52235466 MS.gene049975:intron 40.0%
AGTACATCTCTGATGAACCA+TGG + chr5.3:52235119-52235138 MS.gene049975:intron 40.0%
AGTTTATCTTGCTCTGATGC+AGG + chr5.3:52234447-52234466 MS.gene049975:intron 40.0%
ATTAATGTCAGATCTGGCGT+GGG + chr5.3:52234995-52235014 MS.gene049975:intron 40.0%
ATTTCAGATCCCTTGGAAGA+AGG + chr5.3:52233438-52233457 MS.gene049975:CDS 40.0%
CAAAAGTTTACGGAAGGAGT+GGG - chr5.3:52233181-52233200 None:intergenic 40.0%
CAATGGCAGCATCTAAAGAA+AGG + chr5.3:52234062-52234081 MS.gene049975:intron 40.0%
CATACCATTCTCCTAGTTCA+CGG - chr5.3:52234561-52234580 None:intergenic 40.0%
CCTCTCTTCAGAATAACTTC+TGG - chr5.3:52237773-52237792 None:intergenic 40.0%
CTAGCACAAAAGTTTACGGA+AGG - chr5.3:52233187-52233206 None:intergenic 40.0%
CTCATGTATTCAGCAGAGTA+AGG + chr5.3:52232935-52232954 MS.gene049975:intron 40.0%
CTTGAATACCGATCATTCAG+AGG + chr5.3:52237018-52237037 MS.gene049975:intron 40.0%
GATACCATTCCACAAATGAC+CGG - chr5.3:52234276-52234295 None:intergenic 40.0%
GCATAAAGGGATAGTTGGAT+TGG + chr5.3:52234919-52234938 MS.gene049975:intron 40.0%
GCCAGATCTGACATTAATAC+AGG - chr5.3:52234993-52235012 None:intergenic 40.0%
GTAAAGGATGGAAGGAGAAT+GGG + chr5.3:52236022-52236041 MS.gene049975:intron 40.0%
GTACATCTCTGATGAACCAT+GGG + chr5.3:52235120-52235139 MS.gene049975:intron 40.0%
GTAGGTCATTGAGTTCTATG+AGG + chr5.3:52235445-52235464 MS.gene049975:intron 40.0%
GTCACATCAGTTATGATGGT+TGG - chr5.3:52234101-52234120 None:intergenic 40.0%
GTCAGAGTTGCTTGAAACTA+TGG + chr5.3:52233080-52233099 MS.gene049975:CDS 40.0%
GTCCTGATTGCAAAGAGATA+TGG + chr5.3:52235759-52235778 MS.gene049975:intron 40.0%
TAAAGGATGGAAGGAGAATG+GGG + chr5.3:52236023-52236042 MS.gene049975:intron 40.0%
TAAGGTGAAGTCTAAGTCTG+TGG + chr5.3:52234700-52234719 MS.gene049975:intron 40.0%
TACATCTCTGATGAACCATG+GGG + chr5.3:52235121-52235140 MS.gene049975:intron 40.0%
TAGGACCTGTTGTTAGTGAA+GGG + chr5.3:52233469-52233488 MS.gene049975:CDS 40.0%
TATTAATGTCAGATCTGGCG+TGG + chr5.3:52234994-52235013 MS.gene049975:intron 40.0%
TCCCATATCTCTTTGCAATC+AGG - chr5.3:52235764-52235783 None:intergenic 40.0%
TCCTTCCATCCTTTACCAAA+TGG - chr5.3:52236018-52236037 None:intergenic 40.0%
TCTATCCAGAAGCAAGTTGT+CGG - chr5.3:52237107-52237126 None:intergenic 40.0%
TCTTTCGCAATGTGAAACTC+CGG - chr5.3:52236438-52236457 None:intergenic 40.0%
TGCTATCAACTTCTGCAAGA+AGG - chr5.3:52236647-52236666 None:intergenic 40.0%
TTCAATTCATGCACGGAATC+TGG - chr5.3:52232896-52232915 None:intergenic 40.0%
! AATTTGCTTGTACCATGGAC+TGG + chr5.3:52233658-52233677 MS.gene049975:intron 40.0%
! AGATGTCTTTCTTTTCCCTC+CGG + chr5.3:52236416-52236435 MS.gene049975:intron 40.0%
! ATATGATGACGTTGCTGATG+CGG + chr5.3:52236745-52236764 MS.gene049975:CDS 40.0%
! CCAGAAGTTATTCTGAAGAG+AGG + chr5.3:52237770-52237789 MS.gene049975:CDS 40.0%
! CTCATAATGGAGTATCTACC+CGG + chr5.3:52236717-52236736 MS.gene049975:CDS 40.0%
! GGCATTAAACGTAGTGGTTT+TGG + chr5.3:52234535-52234554 MS.gene049975:intron 40.0%
! GTTATTCTGAAGAGAGGGTA+TGG + chr5.3:52237776-52237795 MS.gene049975:CDS 40.0%
! TACTCTTTTCCGGTCATTTG+TGG + chr5.3:52234264-52234283 MS.gene049975:intron 40.0%
! TACTGCAGTCTTTTTCCTGA+AGG - chr5.3:52237186-52237205 None:intergenic 40.0%
! TGCTGTTGTTGTGATTGGTT+AGG - chr5.3:52237283-52237302 None:intergenic 40.0%
! TTTTCCGGTCATTTGTGGAA+TGG + chr5.3:52234269-52234288 MS.gene049975:intron 40.0%
!! ATCATAGTTTTGCAGGAGGT+TGG - chr5.3:52235153-52235172 None:intergenic 40.0%
AACGTCATCATATCTCCACC+GGG - chr5.3:52236738-52236757 None:intergenic 45.0%
ACTATGATCCTAAGGTGGGA+AGG + chr5.3:52235222-52235241 MS.gene049975:intron 45.0%
ACTTTGGTCCTCTACAGCTA+TGG + chr5.3:52234306-52234325 MS.gene049975:intron 45.0%
AGAGATGCTTAGTAGAGGAC+AGG + chr5.3:52236519-52236538 MS.gene049975:intron 45.0%
ATGATCACTACACTGTCAGC+AGG - chr5.3:52234747-52234766 None:intergenic 45.0%
CAACGTCATCATATCTCCAC+CGG - chr5.3:52236739-52236758 None:intergenic 45.0%
CCAATCACAACAACAGCAAC+TGG + chr5.3:52237285-52237304 MS.gene049975:CDS 45.0%
CTAGGACCTGTTGTTAGTGA+AGG + chr5.3:52233468-52233487 MS.gene049975:CDS 45.0%
CTATCCAGAAGCAAGTTGTC+GGG - chr5.3:52237106-52237125 None:intergenic 45.0%
CTGTGCAAGTGTGTTCAGTT+AGG + chr5.3:52233996-52234015 MS.gene049975:intron 45.0%
GAAAAATCGCAGCAGAATGC+TGG + chr5.3:52237318-52237337 MS.gene049975:CDS 45.0%
GAGTGTTCCAACCGTAGAAT+AGG - chr5.3:52237738-52237757 None:intergenic 45.0%
GCTTAGTAGAGGACAGGTAT+TGG + chr5.3:52236525-52236544 MS.gene049975:intron 45.0%
GGCACATTTGCATGTTTCCT+TGG + chr5.3:52234886-52234905 MS.gene049975:intron 45.0%
GGTAAAGGATGGAAGGAGAA+TGG + chr5.3:52236021-52236040 MS.gene049975:intron 45.0%
GGTTGCACTCAAGTTTATGC+CGG + chr5.3:52235281-52235300 MS.gene049975:intron 45.0%
TCTGAATGGCCGCAATAAGT+AGG + chr5.3:52235427-52235446 MS.gene049975:intron 45.0%
TGAAGGTTACTGCAGTCTAG+CGG - chr5.3:52237169-52237188 None:intergenic 45.0%
TGATCACTACACTGTCAGCA+GGG - chr5.3:52234746-52234765 None:intergenic 45.0%
TGCATTGAATAGGATCCACC+AGG - chr5.3:52236352-52236371 None:intergenic 45.0%
TGCTCTGATGCAGGCATTTA+AGG + chr5.3:52234456-52234475 MS.gene049975:intron 45.0%
TTCATGCACGGAATCTGGAA+TGG - chr5.3:52232891-52232910 None:intergenic 45.0%
TTGCAGACCTATTCTACGGT+TGG + chr5.3:52237728-52237747 MS.gene049975:intron 45.0%
! ATAATGGAGTATCTACCCGG+TGG + chr5.3:52236720-52236739 MS.gene049975:CDS 45.0%
! CCAGTTGCTGTTGTTGTGAT+TGG - chr5.3:52237288-52237307 None:intergenic 45.0%
! GGAAGCTTTATACCAGTCCA+TGG - chr5.3:52233673-52233692 None:intergenic 45.0%
! TGAGTTTGATCAAGGCATCC+AGG - chr5.3:52235905-52235924 None:intergenic 45.0%
!! AGCTTCCTGAGAAGCACTAT+TGG + chr5.3:52233686-52233705 MS.gene049975:intron 45.0%
!!! GTGCGACAATTTTGACTGGT+GGG + chr5.3:52233946-52233965 MS.gene049975:CDS 45.0%
ACCAGCCAATAGTGCTTCTC+AGG - chr5.3:52233694-52233713 None:intergenic 50.0%
ACCTGCCCTTCACTAACAAC+AGG - chr5.3:52233477-52233496 None:intergenic 50.0%
ACCTGTTGTTAGTGAAGGGC+AGG + chr5.3:52233473-52233492 MS.gene049975:CDS 50.0%
AGCCTGCAACCTTCTTCCAA+GGG - chr5.3:52233450-52233469 None:intergenic 50.0%
ATCCCTTGGAAGAAGGTTGC+AGG + chr5.3:52233445-52233464 MS.gene049975:CDS 50.0%
ATGCTTCACTCAAGCGCCAT+GGG + chr5.3:52234510-52234529 MS.gene049975:intron 50.0%
CACCTAAGCCATAGCTGTAG+AGG - chr5.3:52234317-52234336 None:intergenic 50.0%
CTACGTTTAATGCCTCCCCA+TGG - chr5.3:52234529-52234548 None:intergenic 50.0%
CTATGAACGGATCATGGCAC+TGG + chr5.3:52234808-52234827 MS.gene049975:intron 50.0%
GCTAGACTGCAGTAACCTTC+AGG + chr5.3:52237168-52237187 MS.gene049975:CDS 50.0%
GGTATGGCGTGGAATGTGAT+TGG + chr5.3:52237792-52237811 MS.gene049975:CDS 50.0%
GTCCTCTACAGCTATGGCTT+AGG + chr5.3:52234312-52234331 MS.gene049975:intron 50.0%
GTCTCGAACGCTAAGAGTGA+GGG + chr5.3:52233924-52233943 MS.gene049975:CDS 50.0%
TAGCCTGCAACCTTCTTCCA+AGG - chr5.3:52233451-52233470 None:intergenic 50.0%
TCGCAATGTGAAACTCCGGA+GGG - chr5.3:52236434-52236453 None:intergenic 50.0%
TCTCTGATGAACCATGGGGA+TGG + chr5.3:52235125-52235144 MS.gene049975:intron 50.0%
TGTCTCGAACGCTAAGAGTG+AGG + chr5.3:52233923-52233942 MS.gene049975:CDS 50.0%
TTCGCAATGTGAAACTCCGG+AGG - chr5.3:52236435-52236454 None:intergenic 50.0%
TTGGAAGAAGGTTGCAGGCT+AGG + chr5.3:52233450-52233469 MS.gene049975:CDS 50.0%
TTGGCCGTGAACTAGGAGAA+TGG + chr5.3:52234554-52234573 MS.gene049975:intron 50.0%
! AACAGCAACTGGAGCATTCG+CGG + chr5.3:52237296-52237315 MS.gene049975:CDS 50.0%
!! GAGAAGCACTATTGGCTGGT+TGG + chr5.3:52233694-52233713 MS.gene049975:intron 50.0%
!! GAGGGTGCGACAATTTTGAC+TGG + chr5.3:52233942-52233961 MS.gene049975:CDS 50.0%
!! TCCTGAGAAGCACTATTGGC+TGG + chr5.3:52233690-52233709 MS.gene049975:intron 50.0%
!! TGGGGAGGCATTAAACGTAG+TGG + chr5.3:52234529-52234548 MS.gene049975:intron 50.0%
!!! AGTGGTTTTGGCCGTGAACT+AGG + chr5.3:52234547-52234566 MS.gene049975:intron 50.0%
!!! GGTGCGACAATTTTGACTGG+TGG + chr5.3:52233945-52233964 MS.gene049975:CDS 50.0%
CATGCTTCACTCAAGCGCCA+TGG + chr5.3:52234509-52234528 MS.gene049975:intron 55.0%
CATGGCGCTTGAGTGAAGCA+TGG - chr5.3:52234511-52234530 None:intergenic 55.0%
TGCTTCACTCAAGCGCCATG+GGG + chr5.3:52234511-52234530 MS.gene049975:intron 55.0%
! CATGCCCGACAACTTGCTTC+TGG + chr5.3:52237099-52237118 MS.gene049975:CDS 55.0%
! GCACTGGTGCATTCCTTGCA+TGG + chr5.3:52234824-52234843 MS.gene049975:intron 55.0%
! TCTGAAGAGAGGGTATGGCG+TGG + chr5.3:52237781-52237800 MS.gene049975:CDS 55.0%
TTCACTCAAGCGCCATGGGG+AGG + chr5.3:52234514-52234533 MS.gene049975:intron 60.0%
!! GGAGGTTGGTACCATCCCCA+TGG - chr5.3:52235139-52235158 None:intergenic 60.0%
! GACTGGTGGGTCTCGACCAG+AGG + chr5.3:52233959-52233978 MS.gene049975:CDS 65.0%


Chromosome Type Strat End Strand Name
chr5.3 gene 52232715 52237835 52232715 ID=MS.gene049975
chr5.3 mRNA 52232715 52237835 52232715 ID=MS.gene049975.t1;Parent=MS.gene049975
chr5.3 exon 52232715 52232762 52232715 ID=MS.gene049975.t1.exon1;Parent=MS.gene049975.t1
chr5.3 CDS 52232715 52232762 52232715 ID=cds.MS.gene049975.t1;Parent=MS.gene049975.t1
chr5.3 exon 52232854 52232951 52232854 ID=MS.gene049975.t1.exon2;Parent=MS.gene049975.t1
chr5.3 CDS 52232854 52232951 52232854 ID=cds.MS.gene049975.t1;Parent=MS.gene049975.t1
chr5.3 exon 52233069 52233158 52233069 ID=MS.gene049975.t1.exon3;Parent=MS.gene049975.t1
chr5.3 CDS 52233069 52233158 52233069 ID=cds.MS.gene049975.t1;Parent=MS.gene049975.t1
chr5.3 exon 52233410 52233494 52233410 ID=MS.gene049975.t1.exon4;Parent=MS.gene049975.t1
chr5.3 CDS 52233410 52233494 52233410 ID=cds.MS.gene049975.t1;Parent=MS.gene049975.t1
chr5.3 exon 52233903 52233980 52233903 ID=MS.gene049975.t1.exon5;Parent=MS.gene049975.t1
chr5.3 CDS 52233903 52233980 52233903 ID=cds.MS.gene049975.t1;Parent=MS.gene049975.t1
chr5.3 exon 52234071 52234222 52234071 ID=MS.gene049975.t1.exon6;Parent=MS.gene049975.t1
chr5.3 CDS 52234071 52234222 52234071 ID=cds.MS.gene049975.t1;Parent=MS.gene049975.t1
chr5.3 exon 52234323 52234383 52234323 ID=MS.gene049975.t1.exon7;Parent=MS.gene049975.t1
chr5.3 CDS 52234323 52234383 52234323 ID=cds.MS.gene049975.t1;Parent=MS.gene049975.t1
chr5.3 exon 52236618 52236859 52236618 ID=MS.gene049975.t1.exon8;Parent=MS.gene049975.t1
chr5.3 CDS 52236618 52236859 52236618 ID=cds.MS.gene049975.t1;Parent=MS.gene049975.t1
chr5.3 exon 52237093 52237339 52237093 ID=MS.gene049975.t1.exon9;Parent=MS.gene049975.t1
chr5.3 CDS 52237093 52237339 52237093 ID=cds.MS.gene049975.t1;Parent=MS.gene049975.t1
chr5.3 exon 52237734 52237835 52237734 ID=MS.gene049975.t1.exon10;Parent=MS.gene049975.t1
chr5.3 CDS 52237734 52237835 52237734 ID=cds.MS.gene049975.t1;Parent=MS.gene049975.t1
Gene Sequence

>MS.gene049975

ATGTTTATAGAAGAGTTAGATTATGTTATTGTATCGAGACTGATCGATGTAAGTATATACATCTTCTCTACTATACTTTTTCCAATCACCTCAACATCTATCTATAGTGACGCAATATCATAATTCTTTTTTATGACAGGTTTGTTATAATGTTCTGAAAATCGTCATTGACGCCATTCCAGATTCCGTGCATGAATTGAAGCAATATTTTATAAGTCTTCTCATGTATTCAGCAGAGTAAGGGTGTTGCAAACTTTGCTCAAATAATTCAACATAATGGTTGGAATTTCCCTTTGAGTGAATATTTACTTTGATTGTGAGTTTCTGTCATGTAAAGATGTAAAAATTCTGTAGTTTATGCATTAGTCAGAGTTGCTTGAAACTATGGTTCTACATTTTGAATATGGTCAGATATGCAGTGCAGCTTCCCGTCTTATTGTACATGTAAGTATAATAGATTGATCCCACTCCTTCCGTAAACTTTTGTGCTAGCTCATTAAACAAGTAATTGTAACTTCCATTTGCATTTTTTCTTTTTTCTGCGTATATGGGACTGATCGTGCTAACTTTAATTGAGCTAGAACTTTGTCAGACAAATTGGTAGTTGGGATTTTGTCGGCATTCATCTTCAAAAACTGATAAGCTAAAATACTCTTATTATTTCAGGAAAGTATAGCAACATAATTTTTGAATAGGATGATGAAATGGATCAAAAACATCAAAATTTCAGATCCCTTGGAAGAAGGTTGCAGGCTAGGACCTGTTGTTAGTGAAGGGCAGGTATATTTTCATTTCTCATTTCTGTACAATGTATATGCTTTATACTTAACTTATATTCTGAACTTTGTAAAGTAAAGGACGGTTATGCTTTTGTATGTTCAAATTGCTTCTTCATATTCAATGAAAATGTATTGGTAAATATGATATTGTAATGAAATATGTCAATTTGCTTGTACCATGGACTGGTATAAAGCTTCCTGAGAAGCACTATTGGCTGGTTGGTTTTAACTTGTATGTATAATTTATGAGAAGGAAGAAGGAATCTTCTTCAAACAATTGTATATGTCCACATAATGTAGTTTTCTTTCTGGTCAGGCAACTAAAAATAGTTCACTGATTCTAAACATATTTGTCTGGAACAATGATTATATGATATCTAATATTCTGTATTCACATTATATGGTTCAGTACGAAAAAATATTGAAGTTTGTCTCGAACGCTAAGAGTGAGGGTGCGACAATTTTGACTGGTGGGTCTCGACCAGAGGTATGATTATGCTTTCTGTGCAAGTGTGTTCAGTTAGGTATTTCTGCATTTTCCATGATAATTGATTATGTTTTGCAAATGCAATGGCAGCATCTAAAGAAAGGATTCTTTGTTGAACCAACCATCATAACTGATGTGACTACTTCCATGCAAATTTGGAAAGAAGAAGTATTTGGACCTGTTCTGTGTGTAAAAACTTTTAACACCGAGGAAGAAGCTATTGATCTAGCAAATGACACTATGTGAGTCAGTTTTCTACGAACTAACGTTGACTTCATCTGTATACTCTTTTCCGGTCATTTGTGGAATGGTATCTAAGTTATATACTTTGGTCCTCTACAGCTATGGCTTAGGTGCTGCTGTAATATCAAATGATCTAGAAAGATGTGAGCGTGTAACTAAGGTGAGACTGATTATAGGTCATCAAGAAAACAACTAAATAATTGGATTGTTGTTGCAATTGAATAGTTTATCTTGCTCTGATGCAGGCATTTAAGGCCGAAATAGTATGGGTCAATTGCTGTCAGCCATGCTTCACTCAAGCGCCATGGGGAGGCATTAAACGTAGTGGTTTTGGCCGTGAACTAGGAGAATGGTATGACTCTATTTACTAAATTAGCTAATGTGAAAGTCTCCTTAAATGCCTATCTTTTTATTTATTTTTCTCTGGATGAAGAGGTGATCGCAGCTTCTTAATATGCAAAAGAAACCCATAATTATAAGGTGAAGTCTAAGTCTGTGGATTGTTAAATGTAGTACATTCCCTGCTGACAGTGTAGTGATCATCAGATACTGTACTTCTAAATTCAATTTAACAGTCAATAAAGCTATGAACGGATCATGGCACTGGTGCATTCCTTGCATGGTAAAATTGGAATTATACATGATAGGGATTAACATGTGTCGGCACATTTGCATGTTTCCTTGGTCTGAATTTGGCATAAAGGGATAGTTGGATTGGGTAGACAATTAACTGTTACACAATCGCTGTAGAGACTACATACCTAAACCTGTATTAATGTCAGATCTGGCGTGGGAAATAAACAATTTCGCTAAACCTGTCTTATTTGACCTTAAGTCTGATTTTGTTTAATATTTTTAACAGGGGACAATTACTTGAGCGTGAAGCAAGTGACTCAGTACATCTCTGATGAACCATGGGGATGGTACCAACCTCCTGCAAAACTATGATATGTATCTAAAAACTAACATGAATAAGGGTTGGGTAATACCAAATTATGACTATGATCCTAAGGTGGGAAGGCATATATTTATAATGTCTCTGTAAAACAATGGAACTGGTTGCACTCAAGTTTATGCCGGTAGTGTGTTTATTTGATTTGGTTTTATGCTAGCCTAACCATCATGCTTCAATTTTTGAACGCCATTATGACAGACTTCTATCAACTCTATTATCTTTCCTACTATGATTCCATTGAAGTCTATTCTGAATGGCCGCAATAAGTAGGTCATTGAGTTCTATGAGGGGTTGTGAGTGTAAAAATAAAGACTTTTAAGTTAAGCAACACAAAGAAAATGGTCCATTTAGTTTCTTTCCCTATGGTACTTTAATTTTATTAAGCTTTTTCCCACTCAATTAGTTTTGCTTCTTATGTGTGTTTAGCTTCTATGTCCATATTGAACTTTACAATTACTATCTAGGTACAACATGAACCTTGACTCTTATAGGGTAATTTGATGAAATATTTATGGCATGGAGCCAAAAACATATATAACATGCTGTTTGTTAAATTTGAATGTTTAGACTAGACATAGTAGTCCTGATTGCAAAGAGATATGGGAGATGAAAAACTTTGATGTGGTCATATACAATTTCTGATTAGGTAGACATTAGAAAAAAGGGAAAAGTGATGAAATTGTAAAATATTAGTAAAATTCATTGGAAAGAAATGTGTTTTTTCCTGGATGCCTTGATCAAACTCAAATATATAGAAAATATATGTTGGAAACAGTTTAGGGATAACTGCAGGGTATGAATAGTTTAATCTCTCTATCTTAGTTAATTTATTTTGACCATTTGGTAAAGGATGGAAGGAGAATGGGGTTATATGTTGTGTTTAAGGGCTTATTTGGATTGGTTTATTTGAGATTATCTACTTGTGTATGCACTTGTGATACTGTTTGTAAGAGCTTATGAAAACAATTTATGACATGTCCATAGCCTTTTTCTAACTCATTTTCCTAAGCTCCTCAAGTATAGCTTATGAATATAACTCATAGCTTATTTCAGTAAGCTCTCTAGGACATTGTTTAAGTTCAGAATCAGCACAATACATTGAATGCTTTTCGTAAGAATTGTCTGTTACCATGCAAAAGAATAGTCTGTTTAAGTTATTGAACTTATTTTCCTGGTGGATCCTATTCAATGCACATTGTATGACAGATTTGATCAGAGATCATGCACATGAAAAAAAAGATGTCTTTCTTTTCCCTCCGGAGTTTCACATTGCGAAAGAGTTAAATAATGGAACTGAGATAATAGTAATGACGAAACTTGCGAAAACCGTGAGTTAAATCAGAGATGCTTAGTAGAGGACAGGTATTGGAATTATCAGTGTTAGATTGAGCAAATATTATTTTCTTTTACTTATCAGGTGCTTTTATGTTTTTGATTAGGTTGAATATATCAAATCTGAAAGGAACCTTCTTGCAGAAGTTGATAGCAATTGCATTGTAAAACTTTATTGTTCCTTTCAAGATGACGAGTATTTATATCTCATAATGGAGTATCTACCCGGTGGAGATATGATGACGTTGCTGATGCGGAATGAAGTACTGACTGAAGATGAAGCTAAATTCTATATCGGGGAGACTGTGCTAGCCATAGAGTCTATTCATAAACATAATTATATTCATAGGTGCGCTTAATCTGTAATCACTATTGTTTTGCGAAATCCTATTTAGTATAAGATTGTAGCTTAACTGAGTTTTGACAAACCGTTATTTTCAACGAAATCACTATTGTTTTGGAATTATCAGTGTTAGATTGTAGGGTACTTAACTTTACGACATGGATCTTGAATACCGATCATTCAGAGGTATTCATGTTAATCAAGAAATATTTAATATTCTGATTAATTGCATTTTACAGAGATATCATGCCCGACAACTTGCTTCTGGATAGAAATGGTCACGTGAAATTATCAGATTTTGGATTATGTAAGCCGCTAGACTGCAGTAACCTTCAGGAAAAAGACTGCAGTAACCTTCAGGAAAAAGACTTATCTAATGGAGTTAACATAAGTGGAGTCCTTCAAAGTGATGAACTTGCTTTATCTCCTAACCAATCACAACAACAGCAACTGGAGCATTCGCGGAAAAATCGCAGCAGAATGCTGGTAAGTCTCTCAAATAAACACATTCATAAATAAGCATGATTTTTTTTTTTAACATAGCAAACTTTATTATAAAACGGCGAGACTCACAACACATGAGTACTCACAAAACGTATTCATAAACAAGTATGATTACTTTATTCAAAGCGGCCTACACCTTTTTTCAGTTATAATAAAAATTCAGTCATTATTCTTTCGTTATGTTTGGACTTCGGTTCTTTCGTGATATTTTTGTTTGGTTAGTACGAGTCTAGCATCATTTACATCATATATCAATTTGGGTTATTGCTTTATATTTTATCCTTTAAAGACTATTCTCTCTTTTGATTGTATGGCTGCTCTACTTAGATTCATCATTAATGACATTTTAAGCTTTTCTATCTTTGTGATATTGCAGACCTATTCTACGGTTGGAACACTCGATTATATTGCTCCAGAAGTTATTCTGAAGAGAGGGTATGGCGTGGAATGTGATTGGTATAATAGTATATGGCGTTGA
Protein sequence

>MS.gene049975.t1

MFIEELDYVIVSRLIDVCYNVLKIVIDAIPDSVHELKQYFISLLMYSADLCISQSCLKLWFYILNMVRYAVQLPVLLYMMMKWIKNIKISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSRPEHLKKGFFVEPTIITDVTTSMQIWKEEVFGPVLCVKTFNTEEEAIDLANDTIYGLGAAVISNDLERCERVTKVEYIKSERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRNEVLTEDEAKFYIGETVLAIESIHKHNYIHRDIMPDNLLLDRNGHVKLSDFGLCKPLDCSNLQEKDCSNLQEKDLSNGVNISGVLQSDELALSPNQSQQQQLEHSRKNRSRMLTYSTVGTLDYIAPEVILKRGYGVECDWYNSIWR