Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050052.t1 | XP_003615219.1 | 96.6 | 322 | 11 | 0 | 1 | 322 | 43 | 364 | 5.20E-181 | 643.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050052.t1 | Q07463 | 83.7 | 313 | 50 | 1 | 2 | 313 | 29 | 341 | 2.7e-154 | 546.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050052.t1 | G7KBE2 | 96.6 | 322 | 11 | 0 | 1 | 322 | 43 | 364 | 3.7e-181 | 643.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene070896 | MS.gene050052 | PPI |
| MS.gene069130 | MS.gene050052 | PPI |
| MS.gene068593 | MS.gene050052 | PPI |
| MS.gene050052 | MS.gene027802 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050052.t1 | MTR_5g065270 | 96.584 | 322 | 11 | 0 | 1 | 322 | 43 | 364 | 0.0 | 651 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050052.t1 | AT3G21110 | 74.841 | 314 | 78 | 1 | 10 | 322 | 61 | 374 | 7.06e-179 | 502 |
| MS.gene050052.t1 | AT3G21110 | 74.841 | 314 | 78 | 1 | 10 | 322 | 61 | 374 | 7.06e-179 | 502 |
| MS.gene050052.t1 | AT3G21110 | 74.841 | 314 | 78 | 1 | 10 | 322 | 61 | 374 | 7.06e-179 | 502 |
Find 80 sgRNAs with CRISPR-Local
Find 395 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTTACTTTGCCGCGAATTT+TGG | 0.141158 | 5.4:+50761046 | None:intergenic |
| GTAGACACTAAATATGAATT+TGG | 0.160237 | 5.4:-50756166 | MS.gene050052:CDS |
| GGTGAAATTCAACCTTCTTT+TGG | 0.227916 | 5.4:-50761182 | MS.gene050052:CDS |
| CAAAGATCTTGTTTGTGAAT+TGG | 0.265968 | 5.4:-50755663 | MS.gene050052:CDS |
| CAATTCACAAACAAGATCTT+TGG | 0.290495 | 5.4:+50755664 | None:intergenic |
| CTCCTGATTCAAGTAGATAT+TGG | 0.295724 | 5.4:-50755998 | MS.gene050052:CDS |
| TCACAAACCTGGCCTTTAAA+AGG | 0.310522 | 5.4:+50760755 | None:intergenic |
| ACTCGCAAACAACAACTTCT+TGG | 0.340591 | 5.4:-50761140 | MS.gene050052:CDS |
| AAATATGTATGAAGTGTAAA+AGG | 0.346185 | 5.4:+50755611 | None:intergenic |
| GGTTGAATTTCACCTTGTTT+TGG | 0.355110 | 5.4:+50761191 | None:intergenic |
| TACTTGGACCGCTTTCAAAA+TGG | 0.359069 | 5.4:-50755963 | MS.gene050052:CDS |
| TAAATTACCTCGTCTTCATA+AGG | 0.360968 | 5.4:+50755777 | None:intergenic |
| ATCTACTTGAATCAGGAGTA+TGG | 0.368274 | 5.4:+50756003 | None:intergenic |
| AACTCACCAACAAACTCAAC+AGG | 0.389698 | 5.4:+50758091 | None:intergenic |
| ATTTAGTGTCTACCAATATA+AGG | 0.390282 | 5.4:+50756176 | None:intergenic |
| TTTAGGAGTTCTTGAGGTTG+TGG | 0.398832 | 5.4:-50755818 | MS.gene050052:intron |
| CAGCAAGTGGCCTCGGACCA+CGG | 0.399678 | 5.4:-50756199 | MS.gene050052:CDS |
| ACTAGGCATCATACCTCATC+TGG | 0.405677 | 5.4:+50756969 | None:intergenic |
| CTATGGACAGTGTACAATAA+AGG | 0.406741 | 5.4:-50757188 | MS.gene050052:CDS |
| ATCCAATATCTACTTGAATC+AGG | 0.407961 | 5.4:+50755996 | None:intergenic |
| GCTTTAAGGTTGTTTGAATA+CGG | 0.410229 | 5.4:-50756312 | MS.gene050052:CDS |
| TAGACACTAAATATGAATTT+GGG | 0.414632 | 5.4:-50756165 | MS.gene050052:CDS |
| TTTCTTGCAGATCATAGAAA+AGG | 0.417084 | 5.4:-50756376 | MS.gene050052:intron |
| TTGGATTGCCAATTCTTACT+TGG | 0.417145 | 5.4:-50755979 | MS.gene050052:CDS |
| AAAGCGGTCCAAGTAAGAAT+TGG | 0.417482 | 5.4:+50755971 | None:intergenic |
| GAAGTACGGATACTTCTCTA+TGG | 0.419796 | 5.4:-50757205 | MS.gene050052:CDS |
| GGCTTTGCAGCAAGTGGCCT+CGG | 0.419898 | 5.4:-50756206 | MS.gene050052:intron |
| CTCGGACCACGGCCTTATAT+TGG | 0.424336 | 5.4:-50756188 | MS.gene050052:CDS |
| AACGTCGTGATCTGCAGCTT+TGG | 0.425734 | 5.4:+50757001 | None:intergenic |
| ACAAGATCTTTGGGAGCATC+AGG | 0.426348 | 5.4:+50755674 | None:intergenic |
| TTCGAGATATTTATGACAGC+GGG | 0.431143 | 5.4:-50760841 | MS.gene050052:CDS |
| AATTCACAAACAAGATCTTT+GGG | 0.433274 | 5.4:+50755665 | None:intergenic |
| TGGCTTGGCGGTATGTCTAC+TGG | 0.448385 | 5.4:-50755643 | MS.gene050052:CDS |
| AAATTACCTCGTCTTCATAA+GGG | 0.456536 | 5.4:+50755778 | None:intergenic |
| CGTCATTGAAGCGCGAATCA+TGG | 0.465242 | 5.4:+50761214 | None:intergenic |
| AGGAAGAGTGAAATGAAGGT+TGG | 0.466497 | 5.4:+50761079 | None:intergenic |
| TGATCTGCAGCTTTGGTGGT+TGG | 0.469926 | 5.4:+50757008 | None:intergenic |
| TTCTTGCAGATCATAGAAAA+GGG | 0.493602 | 5.4:-50756375 | MS.gene050052:intron |
| GCGGTATGTCTACTGGCCCT+TGG | 0.494982 | 5.4:-50755636 | MS.gene050052:CDS |
| ATCTTGTTTGTGAATTGGCT+TGG | 0.497027 | 5.4:-50755658 | MS.gene050052:CDS |
| GTCGTGATCTGCAGCTTTGG+TGG | 0.510650 | 5.4:+50757004 | None:intergenic |
| AACCTGGCCTTTAAAAGGAA+TGG | 0.519246 | 5.4:+50760760 | None:intergenic |
| CATACCTCATCTGGAGTGAC+TGG | 0.522842 | 5.4:+50756978 | None:intergenic |
| AGGATTTGTCACTGGAAGTA+CGG | 0.522857 | 5.4:-50757219 | MS.gene050052:CDS |
| CAACTCAAATCCAAAATTCG+CGG | 0.523614 | 5.4:-50761056 | MS.gene050052:CDS |
| AAGGTTGTTTGAATACGGAC+AGG | 0.523918 | 5.4:-50756307 | MS.gene050052:intron |
| TTGTTTGTGAATTGGCTTGG+CGG | 0.524028 | 5.4:-50755655 | MS.gene050052:CDS |
| GTTGAGGAAGAGTGAAATGA+AGG | 0.529436 | 5.4:+50761075 | None:intergenic |
| TGAGCCTGAAAATGTTGATA+AGG | 0.531013 | 5.4:-50755937 | MS.gene050052:intron |
| ATTAGAGAGAGAAGAAGTGA+TGG | 0.535261 | 5.4:+50761115 | None:intergenic |
| ATCGTCAGAGTGCTTTCGAT+AGG | 0.538156 | 5.4:-50760793 | MS.gene050052:CDS |
| CATAACTAACCAAGTCCAAA+GGG | 0.538917 | 5.4:+50755536 | None:intergenic |
| TCGTCAGAGTGCTTTCGATA+GGG | 0.540013 | 5.4:-50760792 | MS.gene050052:CDS |
| GAATTTGGGAAGGCAAATGA+TGG | 0.541143 | 5.4:-50756151 | MS.gene050052:CDS |
| CTCGATTCTCACCATCAGGC+AGG | 0.556821 | 5.4:+50757141 | None:intergenic |
| ATGAGAGTATCTCCAAAAGA+AGG | 0.573305 | 5.4:+50761170 | None:intergenic |
| AGTTTCTAATGCAGTTGTGT+CGG | 0.576754 | 5.4:-50758158 | MS.gene050052:CDS |
| GCTTCAATGACGCCAAAACA+AGG | 0.580999 | 5.4:-50761203 | MS.gene050052:CDS |
| ACTTATATAGTGAAATGTGC+CGG | 0.581395 | 5.4:-50755575 | MS.gene050052:CDS |
| GTAGCTAGAGGATTTGTCAC+TGG | 0.586075 | 5.4:-50757227 | MS.gene050052:intron |
| ATGAAGTGTAAAAGGAGCCA+AGG | 0.587699 | 5.4:+50755619 | None:intergenic |
| GCATAACTAACCAAGTCCAA+AGG | 0.589776 | 5.4:+50755535 | None:intergenic |
| TTAATGAGACAAGTCTGTGG+TGG | 0.599591 | 5.4:-50758201 | MS.gene050052:CDS |
| ATCAATATTGTTGATTGATG+AGG | 0.603783 | 5.4:-50756128 | MS.gene050052:intron |
| TGTGGAAATGTCCTGCCTGA+TGG | 0.610426 | 5.4:-50757152 | MS.gene050052:intron |
| TGTCTACCAATATAAGGCCG+TGG | 0.612512 | 5.4:+50756182 | None:intergenic |
| CAATATAAGGCCGTGGTCCG+AGG | 0.612937 | 5.4:+50756189 | None:intergenic |
| CGTTCCAGTCACTCCAGATG+AGG | 0.615240 | 5.4:-50756982 | MS.gene050052:intron |
| TTAGAGAGAGAAGAAGTGAT+GGG | 0.618014 | 5.4:+50761116 | None:intergenic |
| CAACTGCATTAGAAACTATG+TGG | 0.624118 | 5.4:+50758164 | None:intergenic |
| CACTAAATATGAATTTGGGA+AGG | 0.627067 | 5.4:-50756161 | MS.gene050052:CDS |
| TGAAGTGTAAAAGGAGCCAA+GGG | 0.638024 | 5.4:+50755620 | None:intergenic |
| AAAGGCAATCGTAACTACTG+TGG | 0.638094 | 5.4:-50757170 | MS.gene050052:CDS |
| GATCTTTGGGAGCATCAGGA+AGG | 0.642412 | 5.4:+50755678 | None:intergenic |
| GTTCGAGATATTTATGACAG+CGG | 0.669366 | 5.4:-50760842 | MS.gene050052:CDS |
| TTGCAACCCTTATGAAGACG+AGG | 0.711363 | 5.4:-50755784 | MS.gene050052:intron |
| TTCTTAATGAGACAAGTCTG+TGG | 0.716151 | 5.4:-50758204 | MS.gene050052:CDS |
| AATGAAGGTTGGTTTCAGAG+AGG | 0.722745 | 5.4:+50761090 | None:intergenic |
| TCGAGATATTTATGACAGCG+GGG | 0.731522 | 5.4:-50760840 | MS.gene050052:CDS |
| ACTCACCAACAAACTCAACA+GGG | 0.734307 | 5.4:+50758092 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTGATTGATAAATTTAT+AGG | - | chr5.4:50759954-50759973 | MS.gene050052:intron | 10.0% |
| !! | AATTGATTGATAAATTTATA+GGG | - | chr5.4:50759955-50759974 | MS.gene050052:intron | 10.0% |
| !!! | AATATCATCTAAAATAAAAT+TGG | - | chr5.4:50758792-50758811 | MS.gene050052:intron | 10.0% |
| !!! | AATTTTATGATAATAATCAT+GGG | + | chr5.4:50760248-50760267 | None:intergenic | 10.0% |
| !! | AAAAAAATAAAAGGAATAGA+GGG | + | chr5.4:50756348-50756367 | None:intergenic | 15.0% |
| !! | AATGAACAATATTATGATAA+TGG | - | chr5.4:50760145-50760164 | MS.gene050052:intron | 15.0% |
| !! | ACCAATGTAAATAAAATTAA+TGG | + | chr5.4:50758426-50758445 | None:intergenic | 15.0% |
| !! | ACTACAAACAAAAAAATAAA+AGG | + | chr5.4:50756357-50756376 | None:intergenic | 15.0% |
| !! | ATATATTATCTTATTATCCA+AGG | + | chr5.4:50759028-50759047 | None:intergenic | 15.0% |
| !! | CCAATGTAAATAAAATTAAT+GGG | + | chr5.4:50758425-50758444 | None:intergenic | 15.0% |
| !! | GAAATTATGTTAAAAACTAT+AGG | + | chr5.4:50758760-50758779 | None:intergenic | 15.0% |
| !! | TAAATTCAGATAATTATGAA+TGG | + | chr5.4:50759165-50759184 | None:intergenic | 15.0% |
| !! | TAAGTATATAAATGTGATAA+TGG | - | chr5.4:50760705-50760724 | MS.gene050052:intron | 15.0% |
| !! | TTGGATAATAAGATAATATA+TGG | - | chr5.4:50759027-50759046 | MS.gene050052:intron | 15.0% |
| !!! | ATGTTAATGTCTTTTAATAT+TGG | - | chr5.4:50758967-50758986 | MS.gene050052:intron | 15.0% |
| !!! | ATTTATCAAACTTTTTATCA+CGG | - | chr5.4:50758301-50758320 | MS.gene050052:intron | 15.0% |
| !!! | GAATTTTATGATAATAATCA+TGG | + | chr5.4:50760249-50760268 | None:intergenic | 15.0% |
| !!! | TATTAATGTTATGCTTTTTT+AGG | - | chr5.4:50760918-50760937 | MS.gene050052:intron | 15.0% |
| !!! | TATTTGAATTGTTTTAAAAG+TGG | - | chr5.4:50759455-50759474 | MS.gene050052:intron | 15.0% |
| !!! | TTATGTATTGACAATTATTA+GGG | - | chr5.4:50756581-50756600 | MS.gene050052:intron | 15.0% |
| !!! | TTGTTTTATATTTAGTAGTT+TGG | - | chr5.4:50758345-50758364 | MS.gene050052:intron | 15.0% |
| !!! | TTTATGTATTGACAATTATT+AGG | - | chr5.4:50756580-50756599 | MS.gene050052:intron | 15.0% |
| !! | AAATATGTATGAAGTGTAAA+AGG | + | chr5.4:50761145-50761164 | None:intergenic | 20.0% |
| !! | AAATTATGTTAAACTGCAAT+AGG | - | chr5.4:50757179-50757198 | MS.gene050052:CDS | 20.0% |
| !! | AACAAATCTGAATAGAAAAA+TGG | - | chr5.4:50757216-50757235 | MS.gene050052:CDS | 20.0% |
| !! | AACGATTAATGATTAAATGA+AGG | + | chr5.4:50756440-50756459 | None:intergenic | 20.0% |
| !! | AACGTAATTGAATTTCTTAT+TGG | - | chr5.4:50758903-50758922 | MS.gene050052:intron | 20.0% |
| !! | AATAAAATTGGAATTTGAAG+AGG | - | chr5.4:50758804-50758823 | MS.gene050052:intron | 20.0% |
| !! | AATGATCAAAAAGAAAATGT+TGG | - | chr5.4:50759864-50759883 | MS.gene050052:intron | 20.0% |
| !! | AATTTCAAGATAAAACAATC+AGG | + | chr5.4:50758524-50758543 | None:intergenic | 20.0% |
| !! | ACATAGAGGAAATTAAAATT+TGG | + | chr5.4:50760352-50760371 | None:intergenic | 20.0% |
| !! | ACGTAATTGAATTTCTTATT+GGG | - | chr5.4:50758904-50758923 | MS.gene050052:intron | 20.0% |
| !! | CAAAAAAATAAAAGGAATAG+AGG | + | chr5.4:50756349-50756368 | None:intergenic | 20.0% |
| !! | GTGATAAAAAGTTTGATAAA+TGG | + | chr5.4:50758302-50758321 | None:intergenic | 20.0% |
| !! | TAGACACTAAATATGAATTT+GGG | - | chr5.4:50760588-50760607 | MS.gene050052:intron | 20.0% |
| !! | TGTTTATTTACAGAGTTAAA+GGG | - | chr5.4:50756038-50756057 | MS.gene050052:intron | 20.0% |
| !! | TTTGTTTAAATCTGATAGAT+TGG | - | chr5.4:50757346-50757365 | MS.gene050052:intron | 20.0% |
| !!! | AAAAGCATAACATTAATAGA+TGG | + | chr5.4:50760916-50760935 | None:intergenic | 20.0% |
| !!! | AGTGAGTTTTTATTAAATGT+CGG | + | chr5.4:50756091-50756110 | None:intergenic | 20.0% |
| !!! | ATATGAGTTGATTTTTCTTT+AGG | - | chr5.4:50761051-50761070 | MS.gene050052:intron | 20.0% |
| !!! | CCCATTAATTTTATTTACAT+TGG | - | chr5.4:50758422-50758441 | MS.gene050052:intron | 20.0% |
| !!! | TACATATTTTACAGAAGAAA+AGG | + | chr5.4:50759212-50759231 | None:intergenic | 20.0% |
| ! | AACCACTAAACCAATATTTA+GGG | + | chr5.4:50759104-50759123 | None:intergenic | 25.0% |
| ! | AACTTATGCGGTTATTATTA+GGG | - | chr5.4:50756622-50756641 | MS.gene050052:intron | 25.0% |
| ! | AATAATGTTGAGAAACGTTT+GGG | - | chr5.4:50756913-50756932 | MS.gene050052:intron | 25.0% |
| ! | AATTCACAAACAAGATCTTT+GGG | + | chr5.4:50761091-50761110 | None:intergenic | 25.0% |
| ! | ACAAGTAGAAAAGTAAAACT+AGG | + | chr5.4:50759804-50759823 | None:intergenic | 25.0% |
| ! | ATAGGATATTATCATATGAC+AGG | - | chr5.4:50759682-50759701 | MS.gene050052:intron | 25.0% |
| ! | ATATGATAGATTGAATATGG+TGG | - | chr5.4:50757704-50757723 | MS.gene050052:intron | 25.0% |
| ! | ATATTATCATATGACAGGAA+TGG | - | chr5.4:50759687-50759706 | MS.gene050052:intron | 25.0% |
| ! | ATGATAATATCCTATTACAC+AGG | + | chr5.4:50759677-50759696 | None:intergenic | 25.0% |
| ! | ATTTAGTGTCTACCAATATA+AGG | + | chr5.4:50760580-50760599 | None:intergenic | 25.0% |
| ! | CAAAAAGAAAATGTTGGATT+TGG | - | chr5.4:50759870-50759889 | MS.gene050052:intron | 25.0% |
| ! | CACATACCTTGTATTTATAA+TGG | - | chr5.4:50759257-50759276 | MS.gene050052:intron | 25.0% |
| ! | CTAAAATTGATTACACGAAT+TGG | + | chr5.4:50756120-50756139 | None:intergenic | 25.0% |
| ! | CTGTTTATTTACAGAGTTAA+AGG | - | chr5.4:50756037-50756056 | MS.gene050052:intron | 25.0% |
| ! | GGTAATAAGCTTATTTGTAT+AGG | - | chr5.4:50760467-50760486 | MS.gene050052:intron | 25.0% |
| ! | GGTATATGATAGATTGAATA+TGG | - | chr5.4:50757701-50757720 | MS.gene050052:intron | 25.0% |
| ! | GTAAAGCCATTATAAATACA+AGG | + | chr5.4:50759266-50759285 | None:intergenic | 25.0% |
| ! | GTAGACACTAAATATGAATT+TGG | - | chr5.4:50760587-50760606 | MS.gene050052:intron | 25.0% |
| ! | GTTTATTTACAGAGTTAAAG+GGG | - | chr5.4:50756039-50756058 | MS.gene050052:intron | 25.0% |
| ! | TAACCACTAAACCAATATTT+AGG | + | chr5.4:50759105-50759124 | None:intergenic | 25.0% |
| ! | TAACTTATGCGGTTATTATT+AGG | - | chr5.4:50756621-50756640 | MS.gene050052:intron | 25.0% |
| ! | TAATAAGATAATATATGGCG+TGG | - | chr5.4:50759032-50759051 | MS.gene050052:intron | 25.0% |
| ! | TAGCTTAATCAATGTAATGT+TGG | - | chr5.4:50755885-50755904 | MS.gene050052:intron | 25.0% |
| ! | TAGGAAGTTGTACAATTAAA+GGG | - | chr5.4:50759361-50759380 | MS.gene050052:intron | 25.0% |
| ! | TCATTCAGTATCATTCTATT+AGG | - | chr5.4:50758164-50758183 | MS.gene050052:CDS | 25.0% |
| ! | TGATAAATCAACTAGCTAAA+TGG | + | chr5.4:50759927-50759946 | None:intergenic | 25.0% |
| ! | TGATAATATCCTATTACACA+GGG | + | chr5.4:50759676-50759695 | None:intergenic | 25.0% |
| ! | TTATAAACATTCCTAAGTTC+CGG | + | chr5.4:50755755-50755774 | None:intergenic | 25.0% |
| ! | TTATGTTGGTATATGATAGA+GGG | - | chr5.4:50757694-50757713 | MS.gene050052:intron | 25.0% |
| ! | TTTAAACTCTTGTTAGGAAA+TGG | - | chr5.4:50756230-50756249 | MS.gene050052:intron | 25.0% |
| ! | TTTGTTCAAAATGATATCCT+TGG | - | chr5.4:50759008-50759027 | MS.gene050052:intron | 25.0% |
| !! | AGGATATCATTTTGAACAAA+AGG | + | chr5.4:50759008-50759027 | None:intergenic | 25.0% |
| !! | ATCAATATTGTTGATTGATG+AGG | - | chr5.4:50760625-50760644 | MS.gene050052:intron | 25.0% |
| !! | ATCGAGATTTCAAATTCTTT+TGG | - | chr5.4:50759629-50759648 | MS.gene050052:intron | 25.0% |
| !! | ATGTTGTTTAAACTCTTGTT+AGG | - | chr5.4:50756224-50756243 | MS.gene050052:intron | 25.0% |
| !! | ATTAAGTTGTTTATCCAAAC+AGG | - | chr5.4:50755841-50755860 | MS.gene050052:intron | 25.0% |
| !! | TACATCAATCAAATGCTTTT+TGG | + | chr5.4:50756400-50756419 | None:intergenic | 25.0% |
| !! | TTAAGTTGTTTATCCAAACA+GGG | - | chr5.4:50755842-50755861 | MS.gene050052:intron | 25.0% |
| !!! | AAATTTGGTTCAAAAGCATT+TGG | - | chr5.4:50757664-50757683 | MS.gene050052:intron | 25.0% |
| !!! | AACGACCAAAAATTTTAAAG+AGG | - | chr5.4:50756540-50756559 | MS.gene050052:intron | 25.0% |
| !!! | AATTTGGGTTTTTATCATCA+CGG | + | chr5.4:50758049-50758068 | None:intergenic | 25.0% |
| !!! | AATTTGGTTCAAAAGCATTT+GGG | - | chr5.4:50757665-50757684 | MS.gene050052:intron | 25.0% |
| !!! | ACGACCAAAAATTTTAAAGA+GGG | - | chr5.4:50756541-50756560 | MS.gene050052:intron | 25.0% |
| !!! | AGTAGTCATATTTTAAGCAT+TGG | + | chr5.4:50756480-50756499 | None:intergenic | 25.0% |
| !!! | TACTCCCTCTTTAAAATTTT+TGG | + | chr5.4:50756548-50756567 | None:intergenic | 25.0% |
| !!! | TCAACAGTTTTTTTTGGATT+GGG | - | chr5.4:50758830-50758849 | MS.gene050052:intron | 25.0% |
| !!! | TGTTTTAAAAGTGGATGTTT+AGG | - | chr5.4:50759464-50759483 | MS.gene050052:intron | 25.0% |
| !!! | TTACTTTTCTACTTGTCATT+GGG | - | chr5.4:50759808-50759827 | MS.gene050052:intron | 25.0% |
| !!! | TTGTTTTATCTTGAAATTGC+AGG | - | chr5.4:50758526-50758545 | MS.gene050052:intron | 25.0% |
| !!! | TTTACTTTTCTACTTGTCAT+TGG | - | chr5.4:50759807-50759826 | MS.gene050052:intron | 25.0% |
| !!! | TTTTTATTTTAACCAATCCC+CGG | + | chr5.4:50758947-50758966 | None:intergenic | 25.0% |
| AAATTACCTCGTCTTCATAA+GGG | + | chr5.4:50760978-50760997 | None:intergenic | 30.0% | |
| AAGCAAGTGAAAAAGCTTTA+AGG | - | chr5.4:50760427-50760446 | MS.gene050052:intron | 30.0% | |
| AATAATCATGGGATCATCAT+AGG | + | chr5.4:50760237-50760256 | None:intergenic | 30.0% | |
| AATGATATCCTTGTACTCAT+CGG | - | chr5.4:50757511-50757530 | MS.gene050052:intron | 30.0% | |
| ACAATAAAGCAAGCAAAATG+TGG | + | chr5.4:50760504-50760523 | None:intergenic | 30.0% | |
| ACGATGATAAAATCCCAAAT+TGG | - | chr5.4:50756703-50756722 | MS.gene050052:intron | 30.0% | |
| ACTTATATAGTGAAATGTGC+CGG | - | chr5.4:50761178-50761197 | MS.gene050052:CDS | 30.0% | |
| AGAAATCTGCTTTCAATCTA+TGG | - | chr5.4:50757605-50757624 | MS.gene050052:intron | 30.0% | |
| AGATTAGAAGGTAACTTATG+CGG | - | chr5.4:50756610-50756629 | MS.gene050052:intron | 30.0% | |
| AGGAGTTATACAATCAATCT+AGG | - | chr5.4:50759342-50759361 | MS.gene050052:intron | 30.0% | |
| AGTTTCCAATACTATCTAAC+TGG | + | chr5.4:50756297-50756316 | None:intergenic | 30.0% | |
| ATACACTTATAAGAGTGAGA+TGG | - | chr5.4:50756140-50756159 | MS.gene050052:CDS | 30.0% | |
| ATCCAATATCTACTTGAATC+AGG | + | chr5.4:50760760-50760779 | None:intergenic | 30.0% | |
| ATGCAATCTTTGATACACAT+TGG | - | chr5.4:50760652-50760671 | MS.gene050052:intron | 30.0% | |
| CAAATAACAACTCTCTGTAT+TGG | + | chr5.4:50758693-50758712 | None:intergenic | 30.0% | |
| CAATTCACAAACAAGATCTT+TGG | + | chr5.4:50761092-50761111 | None:intergenic | 30.0% | |
| CACTAAATATGAATTTGGGA+AGG | - | chr5.4:50760592-50760611 | MS.gene050052:intron | 30.0% | |
| CTAGGAAGTTGTACAATTAA+AGG | - | chr5.4:50759360-50759379 | MS.gene050052:intron | 30.0% | |
| CTGAGATGTATATGAAACAT+GGG | - | chr5.4:50757402-50757421 | MS.gene050052:intron | 30.0% | |
| CTTATGTTGGTATATGATAG+AGG | - | chr5.4:50757693-50757712 | MS.gene050052:intron | 30.0% | |
| GAAAACCAGTTAGATAGTAT+TGG | - | chr5.4:50756289-50756308 | MS.gene050052:intron | 30.0% | |
| GAATAATGTTGAGAAACGTT+TGG | - | chr5.4:50756912-50756931 | MS.gene050052:intron | 30.0% | |
| GTGATGATAAAAACCCAAAT+TGG | - | chr5.4:50758048-50758067 | MS.gene050052:intron | 30.0% | |
| TAAATTACCTCGTCTTCATA+AGG | + | chr5.4:50760979-50760998 | None:intergenic | 30.0% | |
| TATATGACAGAGGGAAAATT+TGG | - | chr5.4:50757649-50757668 | MS.gene050052:intron | 30.0% | |
| TATTAGGAACCTTATGGTTT+AGG | - | chr5.4:50758180-50758199 | MS.gene050052:CDS | 30.0% | |
| TCATTCTATTAGGAACCTTA+TGG | - | chr5.4:50758174-50758193 | MS.gene050052:CDS | 30.0% | |
| TTAATCAATGTAATGTTGGC+AGG | - | chr5.4:50755889-50755908 | MS.gene050052:intron | 30.0% | |
| TTAGGGAAGTTAAGATTAGA+AGG | - | chr5.4:50756598-50756617 | MS.gene050052:intron | 30.0% | |
| TTCAGATCGCATTACAAAAT+GGG | - | chr5.4:50757118-50757137 | MS.gene050052:intron | 30.0% | |
| TTCATTTGGTATATGACAGA+GGG | - | chr5.4:50757785-50757804 | MS.gene050052:intron | 30.0% | |
| TTCGTTCAGTATCAATCTAT+TGG | - | chr5.4:50756818-50756837 | MS.gene050052:intron | 30.0% | |
| TTCTTGCAGATCATAGAAAA+GGG | - | chr5.4:50760378-50760397 | MS.gene050052:intron | 30.0% | |
| TTTCTTGCAGATCATAGAAA+AGG | - | chr5.4:50760377-50760396 | MS.gene050052:intron | 30.0% | |
| ! | AACACCTTATCAACATTTTC+AGG | + | chr5.4:50760823-50760842 | None:intergenic | 30.0% |
| ! | AATCTATGGATTGCTTCATT+TGG | - | chr5.4:50757619-50757638 | MS.gene050052:intron | 30.0% |
| ! | AGTGTAAAACTGGTTTACTT+TGG | - | chr5.4:50756195-50756214 | MS.gene050052:CDS | 30.0% |
| ! | CAAAGATCTTGTTTGTGAAT+TGG | - | chr5.4:50761090-50761109 | MS.gene050052:CDS | 30.0% |
| ! | GCTATTGTCACATTTTTATC+TGG | + | chr5.4:50758623-50758642 | None:intergenic | 30.0% |
| ! | GTTGGAGTGAGTATATTTTT+CGG | + | chr5.4:50759730-50759749 | None:intergenic | 30.0% |
| ! | TAGAGATTTAGTGGATACAT+TGG | - | chr5.4:50760887-50760906 | MS.gene050052:intron | 30.0% |
| ! | TATATGATAGAGGGAAGTTT+TGG | - | chr5.4:50757848-50757867 | MS.gene050052:intron | 30.0% |
| ! | TTTACATTTTCTACCGCTAA+TGG | - | chr5.4:50760995-50761014 | MS.gene050052:intron | 30.0% |
| !! | ATCCCTAAATATTGGTTTAG+TGG | - | chr5.4:50759099-50759118 | MS.gene050052:intron | 30.0% |
| !! | ATTTGGGTTTTTATCATCAC+GGG | + | chr5.4:50758048-50758067 | None:intergenic | 30.0% |
| !! | GCTTTAAGGTTGTTTGAATA+CGG | - | chr5.4:50760441-50760460 | MS.gene050052:intron | 30.0% |
| !! | TTTTTAGCAACTTATGAGGT+AGG | + | chr5.4:50760191-50760210 | None:intergenic | 30.0% |
| !!! | AAAGTGCATTTTTTTCCCTT+TGG | - | chr5.4:50761202-50761221 | MS.gene050052:CDS | 30.0% |
| !!! | AAGGATCCGTTTTTTAAAAG+GGG | + | chr5.4:50760011-50760030 | None:intergenic | 30.0% |
| !!! | ACAAGGATCCGTTTTTTAAA+AGG | + | chr5.4:50760013-50760032 | None:intergenic | 30.0% |
| !!! | CAAGGATCCGTTTTTTAAAA+GGG | + | chr5.4:50760012-50760031 | None:intergenic | 30.0% |
| !!! | CTACTTTTTAGCAACTTATG+AGG | + | chr5.4:50760195-50760214 | None:intergenic | 30.0% |
| !!! | GTCAACAGTTTTTTTTGGAT+TGG | - | chr5.4:50758829-50758848 | MS.gene050052:intron | 30.0% |
| AAATTACAGCCCTGTGTAAT+AGG | - | chr5.4:50759664-50759683 | MS.gene050052:intron | 35.0% | |
| ACAAAATGGGACAAAACTCT+TGG | - | chr5.4:50757131-50757150 | MS.gene050052:intron | 35.0% | |
| AGGGAAGAACAATACTCTTA+TGG | - | chr5.4:50757556-50757575 | MS.gene050052:intron | 35.0% | |
| AGTTTCTAATGCAGTTGTGT+CGG | - | chr5.4:50758595-50758614 | MS.gene050052:intron | 35.0% | |
| ATACCAAATGAAGCAATCCA+TGG | + | chr5.4:50757625-50757644 | None:intergenic | 35.0% | |
| ATCGGATGTTAGTGTAAAAC+TGG | - | chr5.4:50756185-50756204 | MS.gene050052:CDS | 35.0% | |
| ATCTACTTGAATCAGGAGTA+TGG | + | chr5.4:50760753-50760772 | None:intergenic | 35.0% | |
| ATCTCAAATATGACCCTGTT+TGG | + | chr5.4:50755858-50755877 | None:intergenic | 35.0% | |
| ATTAGAGAGAGAAGAAGTGA+TGG | + | chr5.4:50755641-50755660 | None:intergenic | 35.0% | |
| CAAAATATGTGTCAAGGTGA+TGG | + | chr5.4:50759499-50759518 | None:intergenic | 35.0% | |
| CAAAATGGGACAAAACTCTT+GGG | - | chr5.4:50757132-50757151 | MS.gene050052:intron | 35.0% | |
| CAACTCAAATCCAAAATTCG+CGG | - | chr5.4:50755697-50755716 | MS.gene050052:intron | 35.0% | |
| CAACTGCATTAGAAACTATG+TGG | + | chr5.4:50758592-50758611 | None:intergenic | 35.0% | |
| CACAAGCAAAATATGTGTCA+AGG | + | chr5.4:50759505-50759524 | None:intergenic | 35.0% | |
| CACACTAGGAAGAGTAAAAT+TGG | + | chr5.4:50757072-50757091 | None:intergenic | 35.0% | |
| CATTTCTCAAGCAAACTGAA+GGG | - | chr5.4:50757940-50757959 | MS.gene050052:intron | 35.0% | |
| CTATGGACAGTGTACAATAA+AGG | - | chr5.4:50759565-50759584 | MS.gene050052:intron | 35.0% | |
| CTATTACTCTTCTTTCTGCT+AGG | + | chr5.4:50757969-50757988 | None:intergenic | 35.0% | |
| CTCCTGATTCAAGTAGATAT+TGG | - | chr5.4:50760755-50760774 | MS.gene050052:intron | 35.0% | |
| CTCTGATAAACATTCACACT+AGG | + | chr5.4:50757086-50757105 | None:intergenic | 35.0% | |
| CTTCAGATCGCATTACAAAA+TGG | - | chr5.4:50757117-50757136 | MS.gene050052:intron | 35.0% | |
| CTTCATTTGGTATATGACAG+AGG | - | chr5.4:50757784-50757803 | MS.gene050052:intron | 35.0% | |
| GAAGAACAATACTCTTATGG+TGG | - | chr5.4:50757559-50757578 | MS.gene050052:intron | 35.0% | |
| GAATCCATTAGATGAACTCA+TGG | - | chr5.4:50757003-50757022 | MS.gene050052:CDS | 35.0% | |
| GAGCAGGAAACTAATAGATA+AGG | + | chr5.4:50759989-50760008 | None:intergenic | 35.0% | |
| GATAAAAACCCAAATTGGAG+AGG | - | chr5.4:50758053-50758072 | MS.gene050052:intron | 35.0% | |
| GATAAAATCCCAAATTGGAG+AGG | - | chr5.4:50756708-50756727 | MS.gene050052:intron | 35.0% | |
| GATGAAAAGAATCACAAACC+TGG | + | chr5.4:50756012-50756031 | None:intergenic | 35.0% | |
| GCTACACAATAATCCATTAG+CGG | + | chr5.4:50761011-50761030 | None:intergenic | 35.0% | |
| GCTGAGATGTATATGAAACA+TGG | - | chr5.4:50757401-50757420 | MS.gene050052:intron | 35.0% | |
| GCTTGACTTTACAATTTGAC+TGG | - | chr5.4:50760526-50760545 | MS.gene050052:intron | 35.0% | |
| GGATTGCTTCATTTGGTATA+TGG | - | chr5.4:50757626-50757645 | MS.gene050052:intron | 35.0% | |
| GGTATATGGTATATGACAGA+GGG | - | chr5.4:50757640-50757659 | MS.gene050052:intron | 35.0% | |
| GTGGTTACTGAATATGAACA+TGG | - | chr5.4:50757578-50757597 | MS.gene050052:intron | 35.0% | |
| GTGTAGAAGCAAATCTCAAA+GGG | - | chr5.4:50756938-50756957 | MS.gene050052:intron | 35.0% | |
| GTTCGAGATATTTATGACAG+CGG | - | chr5.4:50755911-50755930 | MS.gene050052:intron | 35.0% | |
| GTTGCTGTATTATCTGTAGT+GGG | - | chr5.4:50756660-50756679 | MS.gene050052:intron | 35.0% | |
| TAAAAACAACCTTGTCCTCA+AGG | + | chr5.4:50758005-50758024 | None:intergenic | 35.0% | |
| TATCTATGATCAGTGATGCT+GGG | - | chr5.4:50760106-50760125 | MS.gene050052:intron | 35.0% | |
| TCAAATAGAGGTTGTAGCAA+TGG | - | chr5.4:50757264-50757283 | MS.gene050052:intron | 35.0% | |
| TGAGCCTGAAAATGTTGATA+AGG | - | chr5.4:50760816-50760835 | MS.gene050052:CDS | 35.0% | |
| TGCAAGAAAATGCAACATAG+AGG | + | chr5.4:50760366-50760385 | None:intergenic | 35.0% | |
| TGCGAAAAGTTATCCATTTC+TGG | + | chr5.4:50760317-50760336 | None:intergenic | 35.0% | |
| TGGACAGAAAAGTAGACAAT+AGG | - | chr5.4:50759890-50759909 | MS.gene050052:intron | 35.0% | |
| TGGTATATGGTATATGACAG+AGG | - | chr5.4:50757639-50757658 | MS.gene050052:intron | 35.0% | |
| TGTTGCTGTATTATCTGTAG+TGG | - | chr5.4:50756659-50756678 | MS.gene050052:intron | 35.0% | |
| TTACTGAATATGAACATGGC+TGG | - | chr5.4:50757582-50757601 | MS.gene050052:intron | 35.0% | |
| TTAGAGAGAGAAGAAGTGAT+GGG | + | chr5.4:50755640-50755659 | None:intergenic | 35.0% | |
| TTATCTATGATCAGTGATGC+TGG | - | chr5.4:50760105-50760124 | MS.gene050052:intron | 35.0% | |
| TTCGAGATATTTATGACAGC+GGG | - | chr5.4:50755912-50755931 | MS.gene050052:intron | 35.0% | |
| TTCTTAATGAGACAAGTCTG+TGG | - | chr5.4:50758549-50758568 | MS.gene050052:intron | 35.0% | |
| TTGCTGTATTATCTGTAGTG+GGG | - | chr5.4:50756661-50756680 | MS.gene050052:intron | 35.0% | |
| TTGGATTGCCAATTCTTACT+TGG | - | chr5.4:50760774-50760793 | MS.gene050052:CDS | 35.0% | |
| TTTCATATACATCTCAGCCA+AGG | + | chr5.4:50757399-50757418 | None:intergenic | 35.0% | |
| ! | AATCCATGGATTGCTTCATT+TGG | - | chr5.4:50757771-50757790 | MS.gene050052:intron | 35.0% |
| ! | ATCTTGTTTGTGAATTGGCT+TGG | - | chr5.4:50761095-50761114 | MS.gene050052:CDS | 35.0% |
| ! | CTTCTTAGATTGAGTATTGC+TGG | - | chr5.4:50760862-50760881 | MS.gene050052:intron | 35.0% |
| ! | CTTGCTTCCATTCCTTTTAA+AGG | - | chr5.4:50755986-50756005 | MS.gene050052:CDS | 35.0% |
| ! | GGGAAAAAAATGCACTTTTC+CGG | + | chr5.4:50761200-50761219 | None:intergenic | 35.0% |
| ! | GGTGAAATTCAACCTTCTTT+TGG | - | chr5.4:50755571-50755590 | MS.gene050052:CDS | 35.0% |
| ! | GTAAAACAATGGACTCTCAT+CGG | - | chr5.4:50756167-50756186 | MS.gene050052:CDS | 35.0% |
| ! | TATTTAGTAAGCACTAGCCT+AGG | - | chr5.4:50759305-50759324 | MS.gene050052:intron | 35.0% |
| !! | AAGGCATTGAGAGGAATTTA+TGG | - | chr5.4:50757458-50757477 | MS.gene050052:intron | 35.0% |
| !! | AGGCATTGAGAGGAATTTAT+GGG | - | chr5.4:50757459-50757478 | MS.gene050052:intron | 35.0% |
| !! | ATAAGAGTATTGTTCTTCCC+TGG | + | chr5.4:50757557-50757576 | None:intergenic | 35.0% |
| !! | ATGAGAGTATCTCCAAAAGA+AGG | + | chr5.4:50755586-50755605 | None:intergenic | 35.0% |
| !! | ATGCCTTCTTTTAGTTAGTG+AGG | - | chr5.4:50760276-50760295 | MS.gene050052:intron | 35.0% |
| !! | GATGTCTGCTTTTCAAATAG+AGG | - | chr5.4:50757252-50757271 | MS.gene050052:intron | 35.0% |
| !! | GGAAGAGTATCCCTAAATAT+TGG | - | chr5.4:50759091-50759110 | MS.gene050052:intron | 35.0% |
| !! | GGTTGAATTTCACCTTGTTT+TGG | + | chr5.4:50755565-50755584 | None:intergenic | 35.0% |
| !! | TTGCTGGTTTAGAGATTTAG+TGG | - | chr5.4:50760878-50760897 | MS.gene050052:intron | 35.0% |
| !!! | ACAGTTTTTTTTGGATTGGG+TGG | - | chr5.4:50758833-50758852 | MS.gene050052:intron | 35.0% |
| !!! | AGGCAGTCAACAGTTTTTTT+TGG | - | chr5.4:50758824-50758843 | MS.gene050052:intron | 35.0% |
| !!! | AGTTTTTTTTGGATTGGGTG+GGG | - | chr5.4:50758835-50758854 | MS.gene050052:intron | 35.0% |
| !!! | CAGTTTTTTTTGGATTGGGT+GGG | - | chr5.4:50758834-50758853 | MS.gene050052:intron | 35.0% |
| !!! | CATTTTTTTCCCTTTGGACT+TGG | - | chr5.4:50761208-50761227 | MS.gene050052:CDS | 35.0% |
| !!! | CGAATTTTGGATTTGAGTTG+AGG | + | chr5.4:50755697-50755716 | None:intergenic | 35.0% |
| !!! | TGAGGACAAGGTTGTTTTTA+AGG | - | chr5.4:50758005-50758024 | MS.gene050052:intron | 35.0% |
| !!! | TGCTTTTTTAGGAGTTCTTG+AGG | - | chr5.4:50760929-50760948 | MS.gene050052:intron | 35.0% |
| AAACTGTAGCAGTAACTGCT+TGG | - | chr5.4:50756312-50756331 | MS.gene050052:CDS | 40.0% | |
| AAAGCGGTCCAAGTAAGAAT+TGG | + | chr5.4:50760785-50760804 | None:intergenic | 40.0% | |
| AAAGGCAATCGTAACTACTG+TGG | - | chr5.4:50759583-50759602 | MS.gene050052:intron | 40.0% | |
| AAATCTCGATTCTCACCATC+AGG | + | chr5.4:50759619-50759638 | None:intergenic | 40.0% | |
| AACCCAAATTGGAGAGGAAA+TGG | - | chr5.4:50758059-50758078 | MS.gene050052:intron | 40.0% | |
| AACTCACCAACAAACTCAAC+AGG | + | chr5.4:50758665-50758684 | None:intergenic | 40.0% | |
| AAGGTTGTTTGAATACGGAC+AGG | - | chr5.4:50760446-50760465 | MS.gene050052:intron | 40.0% | |
| AAGTTAGTTAGAGAGTGGAG+GGG | - | chr5.4:50758091-50758110 | MS.gene050052:intron | 40.0% | |
| AATAGAGGTTGTAGCAATGG+AGG | - | chr5.4:50757267-50757286 | MS.gene050052:intron | 40.0% | |
| ACAAGTGGTTGTTGTATGGA+AGG | - | chr5.4:50757439-50757458 | MS.gene050052:intron | 40.0% | |
| ACGCCTCACTAACTAAAAGA+AGG | + | chr5.4:50760282-50760301 | None:intergenic | 40.0% | |
| ACTCACCAACAAACTCAACA+GGG | + | chr5.4:50758664-50758683 | None:intergenic | 40.0% | |
| ACTCGCAAACAACAACTTCT+TGG | - | chr5.4:50755613-50755632 | MS.gene050052:CDS | 40.0% | |
| AGAAACCATTTCCAACCTTG+AGG | - | chr5.4:50757987-50758006 | MS.gene050052:intron | 40.0% | |
| AGAGAAATGTCTCTTCTCTG+AGG | - | chr5.4:50756846-50756865 | MS.gene050052:intron | 40.0% | |
| AGCACCATGAGTTCATCTAA+TGG | + | chr5.4:50757010-50757029 | None:intergenic | 40.0% | |
| AGGAAGAGTGAAATGAAGGT+TGG | + | chr5.4:50755677-50755696 | None:intergenic | 40.0% | |
| AGGATTTGTCACTGGAAGTA+CGG | - | chr5.4:50759534-50759553 | MS.gene050052:intron | 40.0% | |
| ATGAAGTGTAAAAGGAGCCA+AGG | + | chr5.4:50761137-50761156 | None:intergenic | 40.0% | |
| ATTCAATCGCTCAGCCATTT+GGG | + | chr5.4:50756896-50756915 | None:intergenic | 40.0% | |
| CAAGTTAGTTAGAGAGTGGA+GGG | - | chr5.4:50758090-50758109 | MS.gene050052:intron | 40.0% | |
| CACCATTTCCTCTCCAATTT+GGG | + | chr5.4:50758064-50758083 | None:intergenic | 40.0% | |
| CCTAGGAAGTTGAATACTCT+AGG | - | chr5.4:50759322-50759341 | MS.gene050052:intron | 40.0% | |
| CGTGTAGAAGCAAATCTCAA+AGG | - | chr5.4:50756937-50756956 | MS.gene050052:intron | 40.0% | |
| CTCTCTCTACCTAAACCATA+AGG | + | chr5.4:50758192-50758211 | None:intergenic | 40.0% | |
| CTTATAAGAGTGAGATGGTG+TGG | - | chr5.4:50756145-50756164 | MS.gene050052:CDS | 40.0% | |
| CTTTGCATGATTCACTGTGA+TGG | - | chr5.4:50756267-50756286 | MS.gene050052:intron | 40.0% | |
| GAAGTACGGATACTTCTCTA+TGG | - | chr5.4:50759548-50759567 | MS.gene050052:intron | 40.0% | |
| GAATTTGGGAAGGCAAATGA+TGG | - | chr5.4:50760602-50760621 | MS.gene050052:intron | 40.0% | |
| GACGTTGAAGATTTAGCACA+AGG | + | chr5.4:50760030-50760049 | None:intergenic | 40.0% | |
| GAGATGGTGTGGTAAAACAA+TGG | - | chr5.4:50756156-50756175 | MS.gene050052:CDS | 40.0% | |
| GATGTATATGAAACATGGGC+TGG | - | chr5.4:50757406-50757425 | MS.gene050052:intron | 40.0% | |
| GCATTTCTCAAGCAAACTGA+AGG | - | chr5.4:50757939-50757958 | MS.gene050052:intron | 40.0% | |
| GGTTCTATGTTCCTAACTAC+AGG | - | chr5.4:50760726-50760745 | MS.gene050052:intron | 40.0% | |
| GTCTTCTTTCAAAACCTGTG+TGG | - | chr5.4:50758444-50758463 | MS.gene050052:intron | 40.0% | |
| GTTGAGGAAGAGTGAAATGA+AGG | + | chr5.4:50755681-50755700 | None:intergenic | 40.0% | |
| TACTTGGACCGCTTTCAAAA+TGG | - | chr5.4:50760790-50760809 | MS.gene050052:CDS | 40.0% | |
| TATTCAATCGCTCAGCCATT+TGG | + | chr5.4:50756897-50756916 | None:intergenic | 40.0% | |
| TCACCATTTCCTCTCCAATT+TGG | + | chr5.4:50758065-50758084 | None:intergenic | 40.0% | |
| TCGAGATATTTATGACAGCG+GGG | - | chr5.4:50755913-50755932 | MS.gene050052:intron | 40.0% | |
| TGAAGTGTAAAAGGAGCCAA+GGG | + | chr5.4:50761136-50761155 | None:intergenic | 40.0% | |
| TGAGACTTTGTGAACTACCT+TGG | - | chr5.4:50757379-50757398 | MS.gene050052:intron | 40.0% | |
| TGCTGTATTATCTGTAGTGG+GGG | - | chr5.4:50756662-50756681 | MS.gene050052:intron | 40.0% | |
| TGGGGATTAGAGCTTTCTTA+AGG | - | chr5.4:50758853-50758872 | MS.gene050052:intron | 40.0% | |
| TGTTTATCAGAGTCGAGTCA+TGG | - | chr5.4:50757094-50757113 | MS.gene050052:intron | 40.0% | |
| TTAAGGCGGTGACAATGATA+AGG | - | chr5.4:50758022-50758041 | MS.gene050052:intron | 40.0% | |
| TTAATGAGACAAGTCTGTGG+TGG | - | chr5.4:50758552-50758571 | MS.gene050052:intron | 40.0% | |
| TTTAGGAGTTCTTGAGGTTG+TGG | - | chr5.4:50760935-50760954 | MS.gene050052:intron | 40.0% | |
| ! | AACCTGGCCTTTAAAAGGAA+TGG | + | chr5.4:50755996-50756015 | None:intergenic | 40.0% |
| ! | AGTATAAGAGGTGTGTAGGA+GGG | - | chr5.4:50756786-50756805 | MS.gene050052:intron | 40.0% |
| ! | CATGGATTGAAAGCAGAAAG+CGG | + | chr5.4:50757759-50757778 | None:intergenic | 40.0% |
| ! | CATTTGGTTGCTGCTTATGT+TGG | - | chr5.4:50757825-50757844 | MS.gene050052:intron | 40.0% |
| ! | CCTAGAGTATTCAACTTCCT+AGG | + | chr5.4:50759325-50759344 | None:intergenic | 40.0% |
| ! | GTTTTCCCTGTTGAGTTTGT+TGG | - | chr5.4:50758656-50758675 | MS.gene050052:intron | 40.0% |
| ! | TCACAAACCTGGCCTTTAAA+AGG | + | chr5.4:50756001-50756020 | None:intergenic | 40.0% |
| ! | TTTTGCTTGTGTGTAGCTAG+AGG | - | chr5.4:50759514-50759533 | MS.gene050052:intron | 40.0% |
| !! | AATGAAGGTTGGTTTCAGAG+AGG | + | chr5.4:50755666-50755685 | None:intergenic | 40.0% |
| !! | AGTTTTGGTCCTCAAGCATT+TGG | - | chr5.4:50757863-50757882 | MS.gene050052:intron | 40.0% |
| !! | ATGTGTCAAGGTGATGGTTT+TGG | + | chr5.4:50759493-50759512 | None:intergenic | 40.0% |
| !! | CAAATGCTTTTTGGTCTGTG+TGG | + | chr5.4:50756391-50756410 | None:intergenic | 40.0% |
| !! | CCTGCTCCCCTTTTAAAAAA+CGG | - | chr5.4:50760002-50760021 | MS.gene050052:intron | 40.0% |
| !! | GCTCAAGACCATTTTGAAAG+CGG | + | chr5.4:50760801-50760820 | None:intergenic | 40.0% |
| !! | GTTCATTATTTCTGCTGACC+AGG | + | chr5.4:50760132-50760151 | None:intergenic | 40.0% |
| !! | GTTTTGGTCCTCAAGCATTT+GGG | - | chr5.4:50757864-50757883 | MS.gene050052:intron | 40.0% |
| !! | TTCCATTCCTTTTAAAGGCC+AGG | - | chr5.4:50755991-50756010 | MS.gene050052:CDS | 40.0% |
| !! | TTCTTTTAGTTAGTGAGGCG+TGG | - | chr5.4:50760281-50760300 | MS.gene050052:intron | 40.0% |
| !! | TTGTTTGTGAATTGGCTTGG+CGG | - | chr5.4:50761098-50761117 | MS.gene050052:CDS | 40.0% |
| !!! | GGACAAGGTTGTTTTTAAGG+CGG | - | chr5.4:50758008-50758027 | MS.gene050052:intron | 40.0% |
| AACAACCTTGTCCTCAAGGT+TGG | + | chr5.4:50758001-50758020 | None:intergenic | 45.0% | |
| AAGTTAGTTAGAGAGCGGAG+GGG | - | chr5.4:50756746-50756765 | MS.gene050052:intron | 45.0% | |
| AATGCAAATGCTAACGTCCG+GGG | - | chr5.4:50758927-50758946 | MS.gene050052:intron | 45.0% | |
| ACGCACAAGTGGTTGTTGTA+TGG | - | chr5.4:50757435-50757454 | MS.gene050052:intron | 45.0% | |
| ACTAGGCATCATACCTCATC+TGG | + | chr5.4:50759787-50759806 | None:intergenic | 45.0% | |
| ATAGTAACCATCGACCAACC+AGG | + | chr5.4:50758483-50758502 | None:intergenic | 45.0% | |
| ATATGGCGTGGATGTATGCT+TGG | - | chr5.4:50759044-50759063 | MS.gene050052:intron | 45.0% | |
| ATCCCAAATTGGAGAGGAAG+TGG | - | chr5.4:50756714-50756733 | MS.gene050052:intron | 45.0% | |
| CAAGTTAGTTAGAGAGCGGA+GGG | - | chr5.4:50756745-50756764 | MS.gene050052:intron | 45.0% | |
| CACCACTTCCTCTCCAATTT+GGG | + | chr5.4:50756719-50756738 | None:intergenic | 45.0% | |
| CATTTCCAACCTTGAGGACA+AGG | - | chr5.4:50757993-50758012 | MS.gene050052:intron | 45.0% | |
| CGCTTTCTGCTTTCAATCCA+TGG | - | chr5.4:50757757-50757776 | MS.gene050052:intron | 45.0% | |
| CTGGCAAGTTAGTTAGAGAG+CGG | - | chr5.4:50756741-50756760 | MS.gene050052:intron | 45.0% | |
| CTGGCAAGTTAGTTAGAGAG+TGG | - | chr5.4:50756741-50756760 | MS.gene050052:intron | 45.0% | |
| CTTGTCCTCAAGGTTGGAAA+TGG | + | chr5.4:50757995-50758014 | None:intergenic | 45.0% | |
| GAAAATCCCTTCTACCTGGT+TGG | - | chr5.4:50758466-50758485 | MS.gene050052:intron | 45.0% | |
| GAATGCAAATGCTAACGTCC+GGG | - | chr5.4:50758926-50758945 | MS.gene050052:intron | 45.0% | |
| GCAAGTTAGTTAGAGAGTGG+AGG | - | chr5.4:50758089-50758108 | MS.gene050052:intron | 45.0% | |
| GCTTCAATGACGCCAAAACA+AGG | - | chr5.4:50755550-50755569 | MS.gene050052:CDS | 45.0% | |
| GGAATGCAAATGCTAACGTC+CGG | - | chr5.4:50758925-50758944 | MS.gene050052:intron | 45.0% | |
| GTAGCTAGAGGATTTGTCAC+TGG | - | chr5.4:50759526-50759545 | MS.gene050052:intron | 45.0% | |
| TCAAGCCATTGAAGACACTC+AGG | + | chr5.4:50757912-50757931 | None:intergenic | 45.0% | |
| TCACCACTTCCTCTCCAATT+TGG | + | chr5.4:50756720-50756739 | None:intergenic | 45.0% | |
| TCCAACCTGAGTGTCTTCAA+TGG | - | chr5.4:50757904-50757923 | MS.gene050052:intron | 45.0% | |
| TGACCAGACAATGTGATCCA+GGG | - | chr5.4:50757537-50757556 | MS.gene050052:intron | 45.0% | |
| TGTCTACCAATATAAGGCCG+TGG | + | chr5.4:50760574-50760593 | None:intergenic | 45.0% | |
| TGTGAGACTGTTCTGTTTGC+CGG | - | chr5.4:50755733-50755752 | MS.gene050052:intron | 45.0% | |
| TGTGGAAAATCCCTTCTACC+TGG | - | chr5.4:50758462-50758481 | MS.gene050052:intron | 45.0% | |
| TGTTCTGTTTGCCGGAACTT+AGG | - | chr5.4:50755741-50755760 | MS.gene050052:intron | 45.0% | |
| TTGCAACCCTTATGAAGACG+AGG | - | chr5.4:50760969-50760988 | MS.gene050052:intron | 45.0% | |
| ! | AGGAGTATGGACCTGTAGTT+AGG | + | chr5.4:50760740-50760759 | None:intergenic | 45.0% |
| ! | AGGGAGTATAAGAGGTGTGT+AGG | - | chr5.4:50756782-50756801 | MS.gene050052:intron | 45.0% |
| ! | ATCGTCAGAGTGCTTTCGAT+AGG | - | chr5.4:50755960-50755979 | MS.gene050052:CDS | 45.0% |
| ! | CTCTGAGGATCTTATGCTCT+GGG | - | chr5.4:50758223-50758242 | MS.gene050052:intron | 45.0% |
| ! | CTGTATTATCTGTAGTGGGG+GGG | - | chr5.4:50756664-50756683 | MS.gene050052:intron | 45.0% |
| ! | GAGTATAAGAGGTGTGTAGG+AGG | - | chr5.4:50756785-50756804 | MS.gene050052:intron | 45.0% |
| ! | GCTGTATTATCTGTAGTGGG+GGG | - | chr5.4:50756663-50756682 | MS.gene050052:intron | 45.0% |
| ! | GCTTACTTTGCCGCGAATTT+TGG | + | chr5.4:50755710-50755729 | None:intergenic | 45.0% |
| ! | GTAGAAGGGATTTTCCACAC+AGG | + | chr5.4:50758461-50758480 | None:intergenic | 45.0% |
| ! | TCGTCAGAGTGCTTTCGATA+GGG | - | chr5.4:50755961-50755980 | MS.gene050052:CDS | 45.0% |
| ! | TCTCTGAGGATCTTATGCTC+TGG | - | chr5.4:50758222-50758241 | MS.gene050052:intron | 45.0% |
| ! | TGAGGAGATTCAGCTTGCTT+TGG | - | chr5.4:50756979-50756998 | MS.gene050052:intron | 45.0% |
| ! | TGTATTATCTGTAGTGGGGG+GGG | - | chr5.4:50756665-50756684 | MS.gene050052:intron | 45.0% |
| !! | ACAAGATCTTTGGGAGCATC+AGG | + | chr5.4:50761082-50761101 | None:intergenic | 45.0% |
| !! | CATTTGGGTGCTGCTTATGT+TGG | - | chr5.4:50757680-50757699 | MS.gene050052:intron | 45.0% |
| !! | GTTGTATGGAAGGCATTGAG+AGG | - | chr5.4:50757449-50757468 | MS.gene050052:intron | 45.0% |
| !! | TGGTACTGGTCTTCCAGAAA+TGG | - | chr5.4:50760301-50760320 | MS.gene050052:intron | 45.0% |
| !!! | CCGTTTTTTAAAAGGGGAGC+AGG | + | chr5.4:50760005-50760024 | None:intergenic | 45.0% |
| !!! | ATTTTTTTGTTTAATTATTT+TGG | - | chr5.4:50759070-50759089 | MS.gene050052:intron | 5.0% |
| AAATGCTAACGTCCGGGGAT+TGG | - | chr5.4:50758932-50758951 | MS.gene050052:intron | 50.0% | |
| AACGTCGTGATCTGCAGCTT+TGG | + | chr5.4:50759755-50759774 | None:intergenic | 50.0% | |
| AGGTGTGTAGGAGGGAAAGA+GGG | - | chr5.4:50756794-50756813 | MS.gene050052:intron | 50.0% | |
| CACTTGCACCCAAATGCTTG+AGG | + | chr5.4:50757875-50757894 | None:intergenic | 50.0% | |
| CATCGACCAACCAGGTAGAA+GGG | + | chr5.4:50758475-50758494 | None:intergenic | 50.0% | |
| CTGGGCTGCAAAAACCCAAA+TGG | - | chr5.4:50756879-50756898 | MS.gene050052:intron | 50.0% | |
| CTTCCCTGGATCACATTGTC+TGG | + | chr5.4:50757543-50757562 | None:intergenic | 50.0% | |
| GAGGGGATATACACGTGAGA+GGG | - | chr5.4:50756763-50756782 | MS.gene050052:intron | 50.0% | |
| GCAAGTTAGTTAGAGAGCGG+AGG | - | chr5.4:50756744-50756763 | MS.gene050052:intron | 50.0% | |
| GCCATTGAAGACACTCAGGT+TGG | + | chr5.4:50757908-50757927 | None:intergenic | 50.0% | |
| GGTCACAACCGATGAGTACA+AGG | + | chr5.4:50757522-50757541 | None:intergenic | 50.0% | |
| GTGACCAGACAATGTGATCC+AGG | - | chr5.4:50757536-50757555 | MS.gene050052:intron | 50.0% | |
| TAGTTAGTGAGGCGTGGTAC+TGG | - | chr5.4:50760287-50760306 | MS.gene050052:intron | 50.0% | |
| TGTGGAAATGTCCTGCCTGA+TGG | - | chr5.4:50759601-50759620 | MS.gene050052:intron | 50.0% | |
| TTGGAGAGGAAATGGTGAGC+TGG | - | chr5.4:50758067-50758086 | MS.gene050052:intron | 50.0% | |
| TTTGCGTGCTGTGATCACTG+AGG | - | chr5.4:50756961-50756980 | MS.gene050052:intron | 50.0% | |
| ! | CACGTGAGAGGGAGTATAAG+AGG | - | chr5.4:50756774-50756793 | MS.gene050052:intron | 50.0% |
| ! | CATACCTCATCTGGAGTGAC+TGG | + | chr5.4:50759778-50759797 | None:intergenic | 50.0% |
| ! | CTCATGGTGCTGAAACACAC+TGG | - | chr5.4:50757019-50757038 | MS.gene050052:CDS | 50.0% |
| ! | CTCTGAGGAGCTTATGCTCT+GGG | - | chr5.4:50756861-50756880 | MS.gene050052:intron | 50.0% |
| ! | GCTGGTTTCTTACGCACAAG+TGG | - | chr5.4:50757424-50757443 | MS.gene050052:intron | 50.0% |
| ! | GTATTATCTGTAGTGGGGGG+GGG | - | chr5.4:50756666-50756685 | MS.gene050052:intron | 50.0% |
| ! | TATTATCTGTAGTGGGGGGG+GGG | - | chr5.4:50756667-50756686 | MS.gene050052:intron | 50.0% |
| ! | TCTCTGAGGAGCTTATGCTC+TGG | - | chr5.4:50756860-50756879 | MS.gene050052:intron | 50.0% |
| ! | TGATCTGCAGCTTTGGTGGT+TGG | + | chr5.4:50759748-50759767 | None:intergenic | 50.0% |
| !! | GATCTTTGGGAGCATCAGGA+AGG | + | chr5.4:50761078-50761097 | None:intergenic | 50.0% |
| !! | TTGACTGGCTTTGCAGCAAG+TGG | - | chr5.4:50760541-50760560 | MS.gene050052:intron | 50.0% |
| ATGATCAGTGATGCTGGGCC+TGG | - | chr5.4:50760111-50760130 | MS.gene050052:intron | 55.0% | |
| CAAAACTCTTGGGCGCGTGA+CGG | - | chr5.4:50757142-50757161 | MS.gene050052:intron | 55.0% | |
| CAATATAAGGCCGTGGTCCG+AGG | + | chr5.4:50760567-50760586 | None:intergenic | 55.0% | |
| CCATCGACCAACCAGGTAGA+AGG | + | chr5.4:50758476-50758495 | None:intergenic | 55.0% | |
| CGTTCCAGTCACTCCAGATG+AGG | - | chr5.4:50759771-50759790 | MS.gene050052:intron | 55.0% | |
| CTCGATTCTCACCATCAGGC+AGG | + | chr5.4:50759615-50759634 | None:intergenic | 55.0% | |
| GAGGGGAAATACTCGCGAGA+GGG | - | chr5.4:50758108-50758127 | MS.gene050052:CDS | 55.0% | |
| GAGGTGTGTAGGAGGGAAAG+AGG | - | chr5.4:50756793-50756812 | MS.gene050052:intron | 55.0% | |
| GGAGGGGATATACACGTGAG+AGG | - | chr5.4:50756762-50756781 | MS.gene050052:intron | 55.0% | |
| TTGGAGAGGAAGTGGTGAGC+TGG | - | chr5.4:50756722-50756741 | MS.gene050052:intron | 55.0% | |
| ! | ATTATCTGTAGTGGGGGGGG+GGG | - | chr5.4:50756668-50756687 | MS.gene050052:intron | 55.0% |
| ! | CCTTCTACCTGGTTGGTCGA+TGG | - | chr5.4:50758473-50758492 | MS.gene050052:intron | 55.0% |
| ! | CTCGCGAGAGGGAGTATAAG+AGG | - | chr5.4:50758119-50758138 | MS.gene050052:CDS | 55.0% |
| ! | CTCGGACCACGGCCTTATAT+TGG | - | chr5.4:50760565-50760584 | MS.gene050052:intron | 55.0% |
| ! | GGTGCTGAAACACACTGGCT+CGG | - | chr5.4:50757024-50757043 | MS.gene050052:CDS | 55.0% |
| ! | GTCGTGATCTGCAGCTTTGG+TGG | + | chr5.4:50759752-50759771 | None:intergenic | 55.0% |
| ! | TGGCTTGGCGGTATGTCTAC+TGG | - | chr5.4:50761110-50761129 | MS.gene050052:CDS | 55.0% |
| CTTGGGCGCGTGACGGTAAT+GGG | - | chr5.4:50757149-50757168 | MS.gene050052:intron | 60.0% | |
| GCGGTATGTCTACTGGCCCT+TGG | - | chr5.4:50761117-50761136 | MS.gene050052:CDS | 60.0% | |
| GGAGGGGAAATACTCGCGAG+AGG | - | chr5.4:50758107-50758126 | MS.gene050052:CDS | 60.0% | |
| GGCTTTGCAGCAAGTGGCCT+CGG | - | chr5.4:50760547-50760566 | MS.gene050052:intron | 60.0% | |
| TCTTGGGCGCGTGACGGTAA+TGG | - | chr5.4:50757148-50757167 | MS.gene050052:intron | 60.0% | |
| ! | TTATCTGTAGTGGGGGGGGG+GGG | - | chr5.4:50756669-50756688 | MS.gene050052:intron | 60.0% |
| !! | GAAACACACTGGCTCGGTGG+AGG | - | chr5.4:50757030-50757049 | MS.gene050052:CDS | 60.0% |
| !! | GCTGAAACACACTGGCTCGG+TGG | - | chr5.4:50757027-50757046 | MS.gene050052:CDS | 60.0% |
| CAGCAAGTGGCCTCGGACCA+CGG | - | chr5.4:50760554-50760573 | MS.gene050052:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 50755541 | 50761234 | 50755541 | ID=MS.gene050052 |
| chr5.4 | mRNA | 50755541 | 50761234 | 50755541 | ID=MS.gene050052.t1;Parent=MS.gene050052 |
| chr5.4 | exon | 50761052 | 50761234 | 50761052 | ID=MS.gene050052.t1.exon1;Parent=MS.gene050052.t1 |
| chr5.4 | CDS | 50761052 | 50761234 | 50761052 | ID=cds.MS.gene050052.t1;Parent=MS.gene050052.t1 |
| chr5.4 | exon | 50760763 | 50760864 | 50760763 | ID=MS.gene050052.t1.exon2;Parent=MS.gene050052.t1 |
| chr5.4 | CDS | 50760763 | 50760864 | 50760763 | ID=cds.MS.gene050052.t1;Parent=MS.gene050052.t1 |
| chr5.4 | exon | 50758098 | 50758227 | 50758098 | ID=MS.gene050052.t1.exon3;Parent=MS.gene050052.t1 |
| chr5.4 | CDS | 50758098 | 50758227 | 50758098 | ID=cds.MS.gene050052.t1;Parent=MS.gene050052.t1 |
| chr5.4 | exon | 50757153 | 50757245 | 50757153 | ID=MS.gene050052.t1.exon4;Parent=MS.gene050052.t1 |
| chr5.4 | CDS | 50757153 | 50757245 | 50757153 | ID=cds.MS.gene050052.t1;Parent=MS.gene050052.t1 |
| chr5.4 | exon | 50756983 | 50757071 | 50756983 | ID=MS.gene050052.t1.exon5;Parent=MS.gene050052.t1 |
| chr5.4 | CDS | 50756983 | 50757071 | 50756983 | ID=cds.MS.gene050052.t1;Parent=MS.gene050052.t1 |
| chr5.4 | exon | 50756308 | 50756388 | 50756308 | ID=MS.gene050052.t1.exon6;Parent=MS.gene050052.t1 |
| chr5.4 | CDS | 50756308 | 50756388 | 50756308 | ID=cds.MS.gene050052.t1;Parent=MS.gene050052.t1 |
| chr5.4 | exon | 50756129 | 50756218 | 50756129 | ID=MS.gene050052.t1.exon7;Parent=MS.gene050052.t1 |
| chr5.4 | CDS | 50756129 | 50756218 | 50756129 | ID=cds.MS.gene050052.t1;Parent=MS.gene050052.t1 |
| chr5.4 | exon | 50755938 | 50756027 | 50755938 | ID=MS.gene050052.t1.exon8;Parent=MS.gene050052.t1 |
| chr5.4 | CDS | 50755938 | 50756027 | 50755938 | ID=cds.MS.gene050052.t1;Parent=MS.gene050052.t1 |
| chr5.4 | exon | 50755785 | 50755835 | 50755785 | ID=MS.gene050052.t1.exon9;Parent=MS.gene050052.t1 |
| chr5.4 | CDS | 50755785 | 50755835 | 50755785 | ID=cds.MS.gene050052.t1;Parent=MS.gene050052.t1 |
| chr5.4 | exon | 50755541 | 50755702 | 50755541 | ID=MS.gene050052.t1.exon10;Parent=MS.gene050052.t1 |
| chr5.4 | CDS | 50755541 | 50755702 | 50755541 | ID=cds.MS.gene050052.t1;Parent=MS.gene050052.t1 |
| Gene Sequence |
| Protein sequence |
