Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050462.t1 | AHK12705.1 | 99.7 | 376 | 1 | 0 | 1 | 376 | 1 | 376 | 6.40E-222 | 779.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050462.t1 | A2Z7B3 | 90.5 | 378 | 34 | 1 | 1 | 376 | 1 | 378 | 9.4e-206 | 717.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050462.t1 | W8G2X4 | 99.7 | 376 | 1 | 0 | 1 | 376 | 1 | 376 | 4.6e-222 | 779.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050462 | MS.gene050527 | 0.939118 | 2.17E-99 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050462.t1 | MTR_7g115080 | 98.939 | 377 | 3 | 1 | 1 | 376 | 35 | 411 | 0.0 | 782 |
| MS.gene050462.t1 | MTR_7g115080 | 98.939 | 377 | 3 | 1 | 1 | 376 | 1 | 377 | 0.0 | 780 |
| MS.gene050462.t1 | MTR_7g115080 | 98.939 | 377 | 3 | 1 | 1 | 376 | 14 | 390 | 0.0 | 780 |
| MS.gene050462.t1 | MTR_1g080950 | 91.247 | 377 | 32 | 1 | 1 | 376 | 1 | 377 | 0.0 | 728 |
| MS.gene050462.t1 | MTR_1g080950 | 91.247 | 377 | 32 | 1 | 1 | 376 | 37 | 413 | 0.0 | 725 |
| MS.gene050462.t1 | MTR_4g120030 | 28.165 | 316 | 207 | 9 | 29 | 339 | 112 | 412 | 5.58e-27 | 111 |
| MS.gene050462.t1 | MTR_2g096660 | 27.796 | 313 | 202 | 9 | 28 | 330 | 38 | 336 | 1.96e-26 | 108 |
| MS.gene050462.t1 | MTR_4g063600 | 27.003 | 337 | 209 | 12 | 15 | 330 | 10 | 330 | 4.95e-26 | 107 |
| MS.gene050462.t1 | MTR_1g088480 | 28.529 | 333 | 205 | 12 | 28 | 348 | 118 | 429 | 1.04e-25 | 107 |
| MS.gene050462.t1 | MTR_4g063600 | 27.003 | 337 | 206 | 13 | 15 | 330 | 10 | 327 | 1.23e-24 | 103 |
| MS.gene050462.t1 | MTR_1g067530 | 25.138 | 362 | 214 | 12 | 26 | 345 | 110 | 456 | 2.43e-20 | 92.4 |
| MS.gene050462.t1 | MTR_7g108490 | 25.000 | 324 | 213 | 11 | 29 | 341 | 15 | 319 | 1.35e-18 | 85.9 |
| MS.gene050462.t1 | MTR_7g108490 | 25.000 | 324 | 213 | 11 | 29 | 341 | 16 | 320 | 1.41e-18 | 85.9 |
| MS.gene050462.t1 | MTR_5g011940 | 24.852 | 338 | 212 | 12 | 28 | 334 | 90 | 416 | 1.64e-16 | 80.9 |
| MS.gene050462.t1 | MTR_4g102270 | 24.118 | 340 | 214 | 11 | 30 | 337 | 95 | 422 | 1.17e-15 | 78.6 |
| MS.gene050462.t1 | MTR_4g024600 | 25.000 | 336 | 210 | 13 | 30 | 334 | 103 | 427 | 1.33e-15 | 78.2 |
| MS.gene050462.t1 | MTR_0354s0040 | 24.110 | 365 | 227 | 14 | 6 | 334 | 58 | 408 | 1.29e-14 | 75.1 |
| MS.gene050462.t1 | MTR_3g084090 | 23.757 | 362 | 204 | 14 | 30 | 342 | 101 | 439 | 2.23e-13 | 71.6 |
| MS.gene050462.t1 | MTR_4g129820 | 23.599 | 339 | 215 | 11 | 28 | 334 | 95 | 421 | 2.82e-13 | 71.2 |
| MS.gene050462.t1 | MTR_1g009600 | 26.606 | 327 | 213 | 12 | 26 | 336 | 3 | 318 | 1.69e-12 | 69.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050462.t1 | AT5G28840 | 89.390 | 377 | 39 | 1 | 1 | 376 | 1 | 377 | 0.0 | 715 |
| MS.gene050462.t1 | AT5G28840 | 89.390 | 377 | 39 | 1 | 1 | 376 | 1 | 377 | 0.0 | 715 |
| MS.gene050462.t1 | AT3G46440 | 29.260 | 311 | 196 | 9 | 28 | 328 | 29 | 325 | 3.37e-28 | 113 |
| MS.gene050462.t1 | AT3G46440 | 29.260 | 311 | 196 | 9 | 28 | 328 | 29 | 325 | 3.37e-28 | 113 |
| MS.gene050462.t1 | AT3G53520 | 29.299 | 314 | 195 | 11 | 26 | 328 | 118 | 415 | 4.73e-28 | 114 |
| MS.gene050462.t1 | AT5G59290 | 28.617 | 311 | 198 | 9 | 28 | 328 | 1 | 297 | 1.88e-27 | 110 |
| MS.gene050462.t1 | AT3G62830 | 28.431 | 306 | 204 | 9 | 28 | 328 | 119 | 414 | 2.36e-27 | 112 |
| MS.gene050462.t1 | AT3G62830 | 28.431 | 306 | 204 | 9 | 28 | 328 | 119 | 414 | 2.36e-27 | 112 |
| MS.gene050462.t1 | AT2G47650 | 28.431 | 306 | 204 | 9 | 28 | 328 | 121 | 416 | 2.74e-27 | 112 |
| MS.gene050462.t1 | AT5G59290 | 28.617 | 311 | 198 | 9 | 28 | 328 | 30 | 326 | 3.04e-27 | 110 |
| MS.gene050462.t1 | AT5G59290 | 28.617 | 311 | 198 | 9 | 28 | 328 | 45 | 341 | 4.12e-27 | 110 |
| MS.gene050462.t1 | AT5G59290 | 28.617 | 311 | 198 | 9 | 28 | 328 | 23 | 319 | 6.49e-27 | 109 |
| MS.gene050462.t1 | AT2G28760 | 27.653 | 311 | 201 | 9 | 28 | 328 | 31 | 327 | 1.56e-26 | 108 |
| MS.gene050462.t1 | AT2G28760 | 27.653 | 311 | 201 | 9 | 28 | 328 | 31 | 327 | 1.56e-26 | 108 |
| MS.gene050462.t1 | AT2G28760 | 27.653 | 311 | 201 | 9 | 28 | 328 | 31 | 327 | 1.56e-26 | 108 |
| MS.gene050462.t1 | AT2G28760 | 27.653 | 311 | 201 | 9 | 28 | 328 | 62 | 358 | 5.78e-26 | 107 |
| MS.gene050462.t1 | AT3G53520 | 28.662 | 314 | 195 | 12 | 26 | 328 | 118 | 413 | 4.04e-25 | 106 |
| MS.gene050462.t1 | AT2G47650 | 27.707 | 314 | 206 | 10 | 28 | 330 | 121 | 424 | 4.27e-25 | 106 |
| MS.gene050462.t1 | AT3G53520 | 26.844 | 339 | 194 | 13 | 26 | 328 | 118 | 438 | 3.38e-23 | 100 |
| MS.gene050462.t1 | AT1G73250 | 25.312 | 320 | 203 | 8 | 29 | 334 | 18 | 315 | 9.47e-21 | 92.4 |
| MS.gene050462.t1 | AT1G17890 | 24.691 | 324 | 218 | 8 | 29 | 343 | 13 | 319 | 1.08e-20 | 92.0 |
| MS.gene050462.t1 | AT1G17890 | 24.691 | 324 | 218 | 8 | 29 | 343 | 13 | 319 | 1.08e-20 | 92.0 |
| MS.gene050462.t1 | AT1G17890 | 24.691 | 324 | 218 | 8 | 29 | 343 | 21 | 327 | 1.14e-20 | 92.0 |
| MS.gene050462.t1 | AT2G45310 | 25.676 | 370 | 217 | 16 | 6 | 334 | 71 | 423 | 2.19e-18 | 86.7 |
| MS.gene050462.t1 | AT4G00110 | 25.223 | 337 | 208 | 13 | 30 | 334 | 93 | 417 | 4.77e-16 | 79.7 |
| MS.gene050462.t1 | AT1G02000 | 24.438 | 356 | 222 | 13 | 28 | 351 | 92 | 432 | 9.00e-15 | 75.9 |
| MS.gene050462.t1 | AT3G23820 | 23.823 | 361 | 221 | 15 | 28 | 348 | 112 | 458 | 1.30e-12 | 69.3 |
| MS.gene050462.t1 | AT4G30440 | 23.529 | 340 | 214 | 12 | 28 | 334 | 88 | 414 | 1.51e-12 | 68.9 |
| MS.gene050462.t1 | AT3G14790 | 25.767 | 326 | 217 | 14 | 30 | 340 | 9 | 324 | 4.02e-12 | 68.2 |
| MS.gene050462.t1 | AT3G14790 | 25.767 | 326 | 217 | 14 | 30 | 340 | 12 | 327 | 4.10e-12 | 68.2 |
| MS.gene050462.t1 | AT1G53500 | 25.152 | 330 | 214 | 14 | 30 | 340 | 11 | 326 | 3.25e-11 | 65.5 |
Find 110 sgRNAs with CRISPR-Local
Find 210 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGCATTATAACAAAGATTT+TGG | 0.185817 | 7.3:+2325759 | MS.gene050462:CDS |
| GTTTCCAACTGTTTGAATTC+AGG | 0.202846 | 7.3:-2325548 | None:intergenic |
| AGTTCCATCTTGTTGATCTT+AGG | 0.236542 | 7.3:+2324894 | MS.gene050462:CDS |
| GGCTTAGAATTACATACTTT+TGG | 0.241436 | 7.3:+2327749 | MS.gene050462:CDS |
| TTTCAATCTTGCTGCTGATA+TGG | 0.252773 | 7.3:+2324961 | MS.gene050462:CDS |
| AAGCTAAGAATTTCCATTAC+TGG | 0.266863 | 7.3:+2324755 | MS.gene050462:CDS |
| TCTTGTTGATCTTAGGGTTA+TGG | 0.275401 | 7.3:+2324901 | MS.gene050462:CDS |
| CATAACATATACGGCCCTTT+TGG | 0.311202 | 7.3:+2325807 | MS.gene050462:CDS |
| ATGGCTCTCTCTCAAGGTTT+TGG | 0.316832 | 7.3:-2324718 | None:intergenic |
| TTGCGCAGAATGGGAAGTTC+TGG | 0.340402 | 7.3:+2324668 | None:intergenic |
| CGAAGTGAACCTAGTTGAAC+AGG | 0.343532 | 7.3:-2327856 | None:intergenic |
| TTCAATCTTGCTGCTGATAT+GGG | 0.352299 | 7.3:+2324962 | MS.gene050462:CDS |
| GATTGACTAAATCAGACTTC+CGG | 0.353153 | 7.3:+2326587 | MS.gene050462:intron |
| AATACCTTCAACTTCATTGT+TGG | 0.357453 | 7.3:-2326778 | None:intergenic |
| TTCCGGGAGCCAGTGAATAT+TGG | 0.369817 | 7.3:+2326604 | MS.gene050462:CDS |
| TTCCAGCCACAAGATGCATA+TGG | 0.370660 | 7.3:+2325705 | MS.gene050462:intron |
| ATTGACTAAATCAGACTTCC+GGG | 0.372161 | 7.3:+2326588 | MS.gene050462:CDS |
| GTTCCATCTTGTTGATCTTA+GGG | 0.392044 | 7.3:+2324895 | MS.gene050462:CDS |
| ATTACATTATTGCTTCTGAT+TGG | 0.392690 | 7.3:+2324831 | MS.gene050462:CDS |
| ATACATAATGACAGAATGAT+TGG | 0.394363 | 7.3:-2325005 | None:intergenic |
| CAAAAGGGCCGTATATGTTA+TGG | 0.395238 | 7.3:-2325806 | None:intergenic |
| ACCTTGAGAGAGAGCCATAT+TGG | 0.402395 | 7.3:+2324723 | MS.gene050462:CDS |
| TTTCCAACTGTTTGAATTCA+GGG | 0.404484 | 7.3:-2325547 | None:intergenic |
| CTGTGGAAGTAAGTGTCTTT+CGG | 0.410596 | 7.3:-2326030 | None:intergenic |
| GGGCGGTTCCATAACATATA+CGG | 0.411031 | 7.3:+2325798 | MS.gene050462:CDS |
| TGCTGCTGATATGGGTGGGA+TGG | 0.411073 | 7.3:+2324970 | MS.gene050462:CDS |
| GACCAACAACAAACCTCAGC+AGG | 0.427378 | 7.3:-2325602 | None:intergenic |
| GCCAATATGGCTCTCTCTCA+AGG | 0.433604 | 7.3:-2324724 | None:intergenic |
| AGAATTTCCATTACTGGTGC+TGG | 0.433626 | 7.3:+2324761 | MS.gene050462:CDS |
| CGACATCCTTAGTAACTTTG+AGG | 0.437723 | 7.3:-2324931 | None:intergenic |
| TTGCGGCCACGAACACCCTC+TGG | 0.442633 | 7.3:-2326715 | None:intergenic |
| AGTTCTGGAACAAACGACTA+TGG | 0.445353 | 7.3:+2324683 | MS.gene050462:CDS |
| ATACCCATCCAACACATTCC+TGG | 0.445847 | 7.3:+2326691 | MS.gene050462:CDS |
| TTGGAATTGAGTGCCGCATT+GGG | 0.450298 | 7.3:+2325778 | MS.gene050462:CDS |
| TCCAGCCACAAGATGCATAT+GGG | 0.456498 | 7.3:+2325706 | MS.gene050462:intron |
| CTAGGATTAATGATGTTAAG+AGG | 0.463596 | 7.3:+2325065 | MS.gene050462:CDS |
| CACAGATAAATTTGAGATGT+GGG | 0.465937 | 7.3:+2326048 | MS.gene050462:CDS |
| TGTTCAACTAGGTTCACTTC+GGG | 0.469995 | 7.3:+2327858 | MS.gene050462:CDS |
| TTCATTGATGAGTGTGTTGA+AGG | 0.471656 | 7.3:+2326100 | MS.gene050462:CDS |
| AAATTTGAGATGTGGGGAGA+TGG | 0.478216 | 7.3:+2326055 | MS.gene050462:CDS |
| GGCTGATGCCTGGCCTGCTG+AGG | 0.481849 | 7.3:+2325589 | MS.gene050462:CDS |
| TCGTCACTTCCAATATTCAC+TGG | 0.484294 | 7.3:-2326613 | None:intergenic |
| GCTGCTGATATGGGTGGGAT+GGG | 0.485557 | 7.3:+2324971 | MS.gene050462:CDS |
| CTGTTCAACTAGGTTCACTT+CGG | 0.486306 | 7.3:+2327857 | MS.gene050462:CDS |
| TTGTTCGTCGCACAGGTGGA+AGG | 0.490310 | 7.3:+2325984 | MS.gene050462:intron |
| GAATATTGGAAGTGACGAAA+TGG | 0.492369 | 7.3:+2326618 | MS.gene050462:CDS |
| CCTGGTCCAGAGGGTGTTCG+TGG | 0.493108 | 7.3:+2326709 | MS.gene050462:CDS |
| ATACCTTTCCATGTACCAAA+AGG | 0.493262 | 7.3:-2325822 | None:intergenic |
| GCTTGAAGGAGGCTGATGCC+TGG | 0.494249 | 7.3:+2325579 | MS.gene050462:CDS |
| CCACGAACACCCTCTGGACC+AGG | 0.495598 | 7.3:-2326709 | None:intergenic |
| TCGCACAGGTGGAAGGGAAA+AGG | 0.497508 | 7.3:+2325991 | MS.gene050462:intron |
| ACAACAAACCTCAGCAGGCC+AGG | 0.498680 | 7.3:-2325597 | None:intergenic |
| GCCACAAGATGCATATGGGC+TGG | 0.501504 | 7.3:+2325710 | MS.gene050462:intron |
| GGTGTTGATGTAACATCCTA+TGG | 0.504451 | 7.3:+2327805 | MS.gene050462:CDS |
| TTCCAATATTCACTGGCTCC+CGG | 0.506890 | 7.3:-2326606 | None:intergenic |
| GGCTCCAACAATGAAGTTGA+AGG | 0.508928 | 7.3:+2326774 | MS.gene050462:CDS |
| AAATCCACCAGCACCAGTAA+TGG | 0.510988 | 7.3:-2324768 | None:intergenic |
| AATCAGAAGCAATAATGTAA+TGG | 0.514034 | 7.3:-2324829 | None:intergenic |
| TTTGGAATTGAGTGCCGCAT+TGG | 0.517604 | 7.3:+2325777 | MS.gene050462:CDS |
| CCACAGATAAATTTGAGATG+TGG | 0.517863 | 7.3:+2326047 | MS.gene050462:CDS |
| CTACCCTGAATTCAAACAGT+TGG | 0.519009 | 7.3:+2325544 | MS.gene050462:CDS |
| AATCTTGCTGCTGATATGGG+TGG | 0.525081 | 7.3:+2324965 | MS.gene050462:CDS |
| TAATGACAGAATGATTGGAT+TGG | 0.525124 | 7.3:-2325000 | None:intergenic |
| TAATTGCCTCAAAGTTACTA+AGG | 0.532121 | 7.3:+2324925 | MS.gene050462:CDS |
| CTTAAGACGGCGAGCAATGT+GGG | 0.532266 | 7.3:-2324798 | None:intergenic |
| TTAATATGATTGAAGCTGCT+AGG | 0.536084 | 7.3:+2325047 | MS.gene050462:CDS |
| TCCAGCCCATATGCATCTTG+TGG | 0.539478 | 7.3:-2325711 | None:intergenic |
| ATTTCCATTACTGGTGCTGG+TGG | 0.540705 | 7.3:+2324764 | MS.gene050462:CDS |
| TTATCAAAGAGAAACTTGGC+TGG | 0.541202 | 7.3:+2326752 | MS.gene050462:CDS |
| AGTGTGTTGAAGGCGTGCTT+CGG | 0.541389 | 7.3:+2326110 | MS.gene050462:CDS |
| GGAAACAAATGTGAGCTTGA+AGG | 0.543901 | 7.3:+2325565 | MS.gene050462:CDS |
| CAGCTTGAGAAAGAGAAGGC+TGG | 0.546482 | 7.3:+2327781 | MS.gene050462:CDS |
| ACTCAAGCCCCTGTTCAACT+AGG | 0.554112 | 7.3:+2327847 | MS.gene050462:CDS |
| TACCTTTCCATGTACCAAAA+GGG | 0.556614 | 7.3:-2325821 | None:intergenic |
| ATCTTGCTGCTGATATGGGT+GGG | 0.558451 | 7.3:+2324966 | MS.gene050462:CDS |
| GGCTTGAGTCGATACCACTT+TGG | 0.561236 | 7.3:-2327833 | None:intergenic |
| TTCAACACACTCATCAATGA+AGG | 0.562822 | 7.3:-2326098 | None:intergenic |
| ACACTTATCAAAGAGAAACT+TGG | 0.564802 | 7.3:+2326748 | MS.gene050462:CDS |
| GGTTCACTTCGGGCTGCAGA+TGG | 0.567966 | 7.3:+2327868 | MS.gene050462:CDS |
| GCTGCAGATGGCAATGAATG+AGG | 0.572119 | 7.3:+2327880 | MS.gene050462:CDS |
| AGCAATAATGTAATGGCCCT+CGG | 0.581156 | 7.3:-2324822 | None:intergenic |
| TAACCCTAAGATCAACAAGA+TGG | 0.582222 | 7.3:-2324898 | None:intergenic |
| TGGACCAGGAATGTGTTGGA+TGG | 0.589910 | 7.3:-2326695 | None:intergenic |
| TGTTCGTCGCACAGGTGGAA+GGG | 0.590103 | 7.3:+2325985 | MS.gene050462:intron |
| GAATTGAGTGCCGCATTGGG+CGG | 0.593320 | 7.3:+2325781 | MS.gene050462:CDS |
| TCTTAAGACGGCGAGCAATG+TGG | 0.603116 | 7.3:-2324799 | None:intergenic |
| TACCACTTTGGATGATCCAT+AGG | 0.605260 | 7.3:-2327821 | None:intergenic |
| GGACCAGGAATGTGTTGGAT+GGG | 0.608980 | 7.3:-2326694 | None:intergenic |
| CCACATCTCAAATTTATCTG+TGG | 0.609197 | 7.3:-2326047 | None:intergenic |
| CCAACACATTCCTGGTCCAG+AGG | 0.619158 | 7.3:+2326699 | MS.gene050462:CDS |
| CAACACATTCCTGGTCCAGA+GGG | 0.621739 | 7.3:+2326700 | MS.gene050462:CDS |
| TGCTCGCCGTCTTAAGACCG+AGG | 0.623060 | 7.3:+2324805 | MS.gene050462:CDS |
| AGGGTAGATACAAGCACTAG+AGG | 0.626056 | 7.3:-2325528 | None:intergenic |
| AATGGCCCTCGGTCTTAAGA+CGG | 0.626199 | 7.3:-2324811 | None:intergenic |
| ACAGATAAATTTGAGATGTG+GGG | 0.627741 | 7.3:+2326049 | MS.gene050462:CDS |
| TATCAAAGAGAAACTTGGCT+GGG | 0.631951 | 7.3:+2326753 | MS.gene050462:CDS |
| GCTCGCCGTCTTAAGACCGA+GGG | 0.637185 | 7.3:+2324806 | MS.gene050462:CDS |
| CCTCTGGACCAGGAATGTGT+TGG | 0.642759 | 7.3:-2326699 | None:intergenic |
| ACACTCATCAATGAAGGTGA+AGG | 0.645434 | 7.3:-2326092 | None:intergenic |
| AGAGCAGCTTGAGAAAGAGA+AGG | 0.646063 | 7.3:+2327777 | MS.gene050462:CDS |
| GAAGAATGAGCACATGACTG+AGG | 0.648944 | 7.3:+2324856 | MS.gene050462:CDS |
| ATCCTATGGATCATCCAAAG+TGG | 0.669201 | 7.3:+2327819 | MS.gene050462:CDS |
| GAAGTGAACCTAGTTGAACA+GGG | 0.670267 | 7.3:-2327855 | None:intergenic |
| CTTGAGAAAGAGAAGGCTGG+AGG | 0.670675 | 7.3:+2327784 | MS.gene050462:CDS |
| AATGGTTAGCATGAATGAGA+TGG | 0.673558 | 7.3:+2326636 | MS.gene050462:CDS |
| AACAAATGTGAGCTTGAAGG+AGG | 0.696219 | 7.3:+2325568 | MS.gene050462:CDS |
| AAGACGGCGAGCAATGTGGG+AGG | 0.698789 | 7.3:-2324795 | None:intergenic |
| AAGTGAACCTAGTTGAACAG+GGG | 0.722747 | 7.3:-2327854 | None:intergenic |
| TGTTATGGAACCGCCCAATG+CGG | 0.735755 | 7.3:-2325791 | None:intergenic |
| TAAGTGTATTGTCTGAATTG+CGG | 0.744809 | 7.3:-2326732 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAATTGTTTTATTTTTTGT+AGG | + | chr7.3:2325495-2325514 | MS.gene050462:intron | 10.0% |
| !! | AAGTAAAGAAGAAAAAATAA+AGG | - | chr7.3:2327026-2327045 | None:intergenic | 15.0% |
| !! | AATTTCAAAAAGAAAAACTA+CGG | - | chr7.3:2326188-2326207 | None:intergenic | 15.0% |
| !! | TATACAAAGAAAACTAAATT+TGG | + | chr7.3:2326478-2326497 | MS.gene050462:intron | 15.0% |
| !! | TTGCTTTATAGAATTTATTT+AGG | + | chr7.3:2326834-2326853 | MS.gene050462:intron | 15.0% |
| !! | TTGTGAATAGAAATTATTAA+TGG | - | chr7.3:2326266-2326285 | None:intergenic | 15.0% |
| !!! | ATTAAGTTGTTTATCTAAAT+AGG | + | chr7.3:2325298-2325317 | MS.gene050462:intron | 15.0% |
| !!! | TTAAGTTGTTTATCTAAATA+GGG | + | chr7.3:2325299-2325318 | MS.gene050462:intron | 15.0% |
| !!! | TTAGTTATCTCATATTTTTA+AGG | + | chr7.3:2325088-2325107 | MS.gene050462:intron | 15.0% |
| !! | AATTCTATAAAGCAAAAACA+AGG | - | chr7.3:2326829-2326848 | None:intergenic | 20.0% |
| !! | ATTCTGATATTATTATAGGA+TGG | + | chr7.3:2327727-2327746 | MS.gene050462:intron | 20.0% |
| !! | ATTTCAAAAAGAAAAACTAC+GGG | - | chr7.3:2326187-2326206 | None:intergenic | 20.0% |
| !! | CTCAATTCTGATATTATTAT+AGG | + | chr7.3:2327723-2327742 | MS.gene050462:intron | 20.0% |
| !! | TTCTGATATTATTATAGGAT+GGG | + | chr7.3:2327728-2327747 | MS.gene050462:intron | 20.0% |
| !!! | AAGCATTATAACAAAGATTT+TGG | + | chr7.3:2325759-2325778 | MS.gene050462:CDS | 20.0% |
| ! | AAAATGATCAAATATGGCAA+GGG | - | chr7.3:2326931-2326950 | None:intergenic | 25.0% |
| ! | AATCAGAAGCAATAATGTAA+TGG | - | chr7.3:2324832-2324851 | None:intergenic | 25.0% |
| ! | AATTCCAATCATTCAAGATT+TGG | + | chr7.3:2326357-2326376 | MS.gene050462:intron | 25.0% |
| ! | AATTCTATAGATGCTTAAGT+AGG | + | chr7.3:2326324-2326343 | MS.gene050462:intron | 25.0% |
| ! | AGCATACAAAACATAAATGA+CGG | - | chr7.3:2325902-2325921 | None:intergenic | 25.0% |
| ! | ATACATAATGACAGAATGAT+TGG | - | chr7.3:2325008-2325027 | None:intergenic | 25.0% |
| ! | ATTACATTATTGCTTCTGAT+TGG | + | chr7.3:2324831-2324850 | MS.gene050462:CDS | 25.0% |
| ! | ATTCCAATCATTCAAGATTT+GGG | + | chr7.3:2326358-2326377 | MS.gene050462:intron | 25.0% |
| ! | CAAATAAGCATAGTGATATT+TGG | - | chr7.3:2327485-2327504 | None:intergenic | 25.0% |
| ! | GTGGGATATATATTTATTTG+TGG | - | chr7.3:2327303-2327322 | None:intergenic | 25.0% |
| ! | GTTTATAAGACGAAACAAAA+GGG | - | chr7.3:2326909-2326928 | None:intergenic | 25.0% |
| ! | TCTCAAGAAAATATAACATC+AGG | - | chr7.3:2326989-2327008 | None:intergenic | 25.0% |
| ! | TCTGATTTAGTCAATCTAAA+AGG | - | chr7.3:2326583-2326602 | None:intergenic | 25.0% |
| ! | TTTGTGCGTGTAATATATAT+TGG | + | chr7.3:2327589-2327608 | MS.gene050462:intron | 25.0% |
| !! | AGCTGAATTTTAAATTTTGC+AGG | + | chr7.3:2325851-2325870 | MS.gene050462:intron | 25.0% |
| !! | ATAATAGTTAAGAGCATATG+AGG | - | chr7.3:2327403-2327422 | None:intergenic | 25.0% |
| !! | TTAGGTTAGTTCTTATTTCT+TGG | + | chr7.3:2326524-2326543 | MS.gene050462:intron | 25.0% |
| !!! | GGTCTTTGAATTGTTATTTT+CGG | + | chr7.3:2325621-2325640 | MS.gene050462:intron | 25.0% |
| AAGCTAAGAATTTCCATTAC+TGG | + | chr7.3:2324755-2324774 | MS.gene050462:CDS | 30.0% | |
| AATACCTTCAACTTCATTGT+TGG | - | chr7.3:2326781-2326800 | None:intergenic | 30.0% | |
| ACACTTATCAAAGAGAAACT+TGG | + | chr7.3:2326748-2326767 | MS.gene050462:CDS | 30.0% | |
| ATATATCCCACTGTGTATTA+AGG | + | chr7.3:2327312-2327331 | MS.gene050462:intron | 30.0% | |
| ATCATGTATTGCAGAACAAT+TGG | + | chr7.3:2327526-2327545 | MS.gene050462:intron | 30.0% | |
| ATTAGTTGTTTGTGCTTCAT+TGG | + | chr7.3:2327663-2327682 | MS.gene050462:intron | 30.0% | |
| CTAGGATTAATGATGTTAAG+AGG | + | chr7.3:2325065-2325084 | MS.gene050462:CDS | 30.0% | |
| GAAAATGATCAAATATGGCA+AGG | - | chr7.3:2326932-2326951 | None:intergenic | 30.0% | |
| GGTTTATAAGACGAAACAAA+AGG | - | chr7.3:2326910-2326929 | None:intergenic | 30.0% | |
| TAAGTGTATTGTCTGAATTG+CGG | - | chr7.3:2326735-2326754 | None:intergenic | 30.0% | |
| TAATGACAGAATGATTGGAT+TGG | - | chr7.3:2325003-2325022 | None:intergenic | 30.0% | |
| TAATTGCCTCAAAGTTACTA+AGG | + | chr7.3:2324925-2324944 | MS.gene050462:CDS | 30.0% | |
| TATATCCCACTGTGTATTAA+GGG | + | chr7.3:2327313-2327332 | MS.gene050462:intron | 30.0% | |
| TCATGTATTGCAGAACAATT+GGG | + | chr7.3:2327527-2327546 | MS.gene050462:intron | 30.0% | |
| TCCACAATAAACTGAACTAA+TGG | - | chr7.3:2326870-2326889 | None:intergenic | 30.0% | |
| TCCATTAGTTCAGTTTATTG+TGG | + | chr7.3:2326866-2326885 | MS.gene050462:intron | 30.0% | |
| TGAGGGAAAATGATCAAATA+TGG | - | chr7.3:2326937-2326956 | None:intergenic | 30.0% | |
| TGGTTATTCATTTGTACACT+CGG | + | chr7.3:2325650-2325669 | MS.gene050462:intron | 30.0% | |
| TTAATATGATTGAAGCTGCT+AGG | + | chr7.3:2325047-2325066 | MS.gene050462:CDS | 30.0% | |
| TTCTTTGTATACAACCACAT+AGG | - | chr7.3:2326469-2326488 | None:intergenic | 30.0% | |
| TTTCCAACTGTTTGAATTCA+GGG | - | chr7.3:2325550-2325569 | None:intergenic | 30.0% | |
| ! | ACAGATAAATTTGAGATGTG+GGG | + | chr7.3:2326049-2326068 | MS.gene050462:CDS | 30.0% |
| ! | CACAGATAAATTTGAGATGT+GGG | + | chr7.3:2326048-2326067 | MS.gene050462:CDS | 30.0% |
| ! | GCTTTCTGTATATCTGTTTT+AGG | + | chr7.3:2326506-2326525 | MS.gene050462:intron | 30.0% |
| ! | GCTTTTATGAACGATGAAAA+TGG | + | chr7.3:2326222-2326241 | MS.gene050462:intron | 30.0% |
| ! | GGCTTAGAATTACATACTTT+TGG | + | chr7.3:2327749-2327768 | MS.gene050462:CDS | 30.0% |
| !! | GAAATTCTTAGCTTTTCTGT+TGG | - | chr7.3:2324749-2324768 | None:intergenic | 30.0% |
| !!! | ATTGTTATTTTCGGTTATGC+TGG | + | chr7.3:2325630-2325649 | MS.gene050462:intron | 30.0% |
| AAGCCCAAATCTTGAATGAT+TGG | - | chr7.3:2326364-2326383 | None:intergenic | 35.0% | |
| AATGGTTAGCATGAATGAGA+TGG | + | chr7.3:2326636-2326655 | MS.gene050462:CDS | 35.0% | |
| AGAATACAGACCCATTAACA+CGG | - | chr7.3:2327636-2327655 | None:intergenic | 35.0% | |
| AGCAGTACAAATGTTTGTGT+TGG | - | chr7.3:2325137-2325156 | None:intergenic | 35.0% | |
| AGTCGTATGAGAGAACATTA+TGG | + | chr7.3:2325326-2325345 | MS.gene050462:intron | 35.0% | |
| AGTTCCATCTTGTTGATCTT+AGG | + | chr7.3:2324894-2324913 | MS.gene050462:CDS | 35.0% | |
| ATACCTTTCCATGTACCAAA+AGG | - | chr7.3:2325825-2325844 | None:intergenic | 35.0% | |
| ATGAGTAAACATATGTGGTG+TGG | + | chr7.3:2325429-2325448 | MS.gene050462:intron | 35.0% | |
| ATTCTCCCTTAATACACAGT+GGG | - | chr7.3:2327321-2327340 | None:intergenic | 35.0% | |
| ATTGACTAAATCAGACTTCC+GGG | + | chr7.3:2326588-2326607 | MS.gene050462:CDS | 35.0% | |
| CCACATCTCAAATTTATCTG+TGG | - | chr7.3:2326050-2326069 | None:intergenic | 35.0% | |
| GAATATTGGAAGTGACGAAA+TGG | + | chr7.3:2326618-2326637 | MS.gene050462:CDS | 35.0% | |
| GATTGACTAAATCAGACTTC+CGG | + | chr7.3:2326587-2326606 | MS.gene050462:intron | 35.0% | |
| GGTTATTCATTTGTACACTC+GGG | + | chr7.3:2325651-2325670 | MS.gene050462:intron | 35.0% | |
| GTTCCATCTTGTTGATCTTA+GGG | + | chr7.3:2324895-2324914 | MS.gene050462:CDS | 35.0% | |
| GTTTCCAACTGTTTGAATTC+AGG | - | chr7.3:2325551-2325570 | None:intergenic | 35.0% | |
| TAAACATATGTGGTGTGGTA+TGG | + | chr7.3:2325434-2325453 | MS.gene050462:intron | 35.0% | |
| TAACCCTAAGATCAACAAGA+TGG | - | chr7.3:2324901-2324920 | None:intergenic | 35.0% | |
| TACCTTTCCATGTACCAAAA+GGG | - | chr7.3:2325824-2325843 | None:intergenic | 35.0% | |
| TATCAAAGAGAAACTTGGCT+GGG | + | chr7.3:2326753-2326772 | MS.gene050462:CDS | 35.0% | |
| TCTTGTTGATCTTAGGGTTA+TGG | + | chr7.3:2324901-2324920 | MS.gene050462:CDS | 35.0% | |
| TGGTATGGTGTCTATTTCAA+CGG | + | chr7.3:2325449-2325468 | MS.gene050462:intron | 35.0% | |
| TGTCGATGAGTAAACATATG+TGG | + | chr7.3:2325424-2325443 | MS.gene050462:intron | 35.0% | |
| TTATCAAAGAGAAACTTGGC+TGG | + | chr7.3:2326752-2326771 | MS.gene050462:CDS | 35.0% | |
| TTCAACACACTCATCAATGA+AGG | - | chr7.3:2326101-2326120 | None:intergenic | 35.0% | |
| TTCAATCTTGCTGCTGATAT+GGG | + | chr7.3:2324962-2324981 | MS.gene050462:CDS | 35.0% | |
| TTCATTGATGAGTGTGTTGA+AGG | + | chr7.3:2326100-2326119 | MS.gene050462:CDS | 35.0% | |
| TTCCCTCAAGAAAAGAGTAA+CGG | + | chr7.3:2326949-2326968 | MS.gene050462:intron | 35.0% | |
| TTTCAATCTTGCTGCTGATA+TGG | + | chr7.3:2324961-2324980 | MS.gene050462:CDS | 35.0% | |
| TTTGACATGTGAATCAGTGT+TGG | - | chr7.3:2327162-2327181 | None:intergenic | 35.0% | |
| ! | ATTCCGTTACTCTTTTCTTG+AGG | - | chr7.3:2326955-2326974 | None:intergenic | 35.0% |
| ! | CCACAGATAAATTTGAGATG+TGG | + | chr7.3:2326047-2326066 | MS.gene050462:CDS | 35.0% |
| ! | TTCCGTTACTCTTTTCTTGA+GGG | - | chr7.3:2326954-2326973 | None:intergenic | 35.0% |
| ! | TTTTCCATAATCGACAACAC+TGG | - | chr7.3:2327451-2327470 | None:intergenic | 35.0% |
| !!! | GTTAGTTTTGACAGATCATG+TGG | - | chr7.3:2327379-2327398 | None:intergenic | 35.0% |
| AAACTTAAGACCTGCCTATG+TGG | + | chr7.3:2326452-2326471 | MS.gene050462:intron | 40.0% | |
| AACAAATGTGAGCTTGAAGG+AGG | + | chr7.3:2325568-2325587 | MS.gene050462:CDS | 40.0% | |
| AAGTGAACCTAGTTGAACAG+GGG | - | chr7.3:2327857-2327876 | None:intergenic | 40.0% | |
| ACACTCATCAATGAAGGTGA+AGG | - | chr7.3:2326095-2326114 | None:intergenic | 40.0% | |
| AGAATTTCCATTACTGGTGC+TGG | + | chr7.3:2324761-2324780 | MS.gene050462:CDS | 40.0% | |
| AGCAATAATGTAATGGCCCT+CGG | - | chr7.3:2324825-2324844 | None:intergenic | 40.0% | |
| ATCCTATGGATCATCCAAAG+TGG | + | chr7.3:2327819-2327838 | MS.gene050462:CDS | 40.0% | |
| ATGAGCCTTAGACATGACTT+CGG | + | chr7.3:2327229-2327248 | MS.gene050462:intron | 40.0% | |
| ATGTATCTTACCCCACTTAG+TGG | + | chr7.3:2325362-2325381 | MS.gene050462:intron | 40.0% | |
| CAAAAGGGCCGTATATGTTA+TGG | - | chr7.3:2325809-2325828 | None:intergenic | 40.0% | |
| CACCAACACTTTCCTTCATA+AGG | + | chr7.3:2327114-2327133 | MS.gene050462:intron | 40.0% | |
| CATTCTCCCTTAATACACAG+TGG | - | chr7.3:2327322-2327341 | None:intergenic | 40.0% | |
| CGACATCCTTAGTAACTTTG+AGG | - | chr7.3:2324934-2324953 | None:intergenic | 40.0% | |
| CTACCCTGAATTCAAACAGT+TGG | + | chr7.3:2325544-2325563 | MS.gene050462:CDS | 40.0% | |
| CTGTGGAAGTAAGTGTCTTT+CGG | - | chr7.3:2326033-2326052 | None:intergenic | 40.0% | |
| CTGTTCAACTAGGTTCACTT+CGG | + | chr7.3:2327857-2327876 | MS.gene050462:CDS | 40.0% | |
| GAAGTGAACCTAGTTGAACA+GGG | - | chr7.3:2327858-2327877 | None:intergenic | 40.0% | |
| GGAAACAAATGTGAGCTTGA+AGG | + | chr7.3:2325565-2325584 | MS.gene050462:CDS | 40.0% | |
| GTGTATTAAGGGAGAATGCA+AGG | + | chr7.3:2327324-2327343 | MS.gene050462:intron | 40.0% | |
| TACCACTTTGGATGATCCAT+AGG | - | chr7.3:2327824-2327843 | None:intergenic | 40.0% | |
| TATTAAGGGAGAATGCAAGG+AGG | + | chr7.3:2327327-2327346 | MS.gene050462:intron | 40.0% | |
| TCGTCACTTCCAATATTCAC+TGG | - | chr7.3:2326616-2326635 | None:intergenic | 40.0% | |
| TGACAGATCATGTGGTTGTA+TGG | - | chr7.3:2327371-2327390 | None:intergenic | 40.0% | |
| TGTATCTTACCCCACTTAGT+GGG | + | chr7.3:2325363-2325382 | MS.gene050462:intron | 40.0% | |
| TGTTCAACTAGGTTCACTTC+GGG | + | chr7.3:2327858-2327877 | MS.gene050462:CDS | 40.0% | |
| TTCATTTGTACACTCGGGTT+AGG | + | chr7.3:2325656-2325675 | MS.gene050462:intron | 40.0% | |
| TTGTATACAACCACATAGGC+AGG | - | chr7.3:2326465-2326484 | None:intergenic | 40.0% | |
| TTTGAGAGAGCTTACGGATA+TGG | + | chr7.3:2325158-2325177 | MS.gene050462:intron | 40.0% | |
| ! | AAATTTGAGATGTGGGGAGA+TGG | + | chr7.3:2326055-2326074 | MS.gene050462:CDS | 40.0% |
| ! | AAGCTTTATCCCACTAAGTG+GGG | - | chr7.3:2325375-2325394 | None:intergenic | 40.0% |
| ! | AGCTTTTCTGTTGGCCAATA+TGG | - | chr7.3:2324740-2324759 | None:intergenic | 40.0% |
| ! | CAAGCTTTATCCCACTAAGT+GGG | - | chr7.3:2325376-2325395 | None:intergenic | 40.0% |
| ! | CACCTTATGAAGGAAAGTGT+TGG | - | chr7.3:2327119-2327138 | None:intergenic | 40.0% |
| ! | CATAACATATACGGCCCTTT+TGG | + | chr7.3:2325807-2325826 | MS.gene050462:CDS | 40.0% |
| ! | TAGACCAGTGTTGTCGATTA+TGG | + | chr7.3:2327444-2327463 | MS.gene050462:intron | 40.0% |
| !! | AGTTCTGGAACAAACGACTA+TGG | + | chr7.3:2324683-2324702 | MS.gene050462:CDS | 40.0% |
| !! | CAGGTCTTAAGTTTTGTGAG+AGG | - | chr7.3:2326446-2326465 | None:intergenic | 40.0% |
| !! | GGTGTTGATGTAACATCCTA+TGG | + | chr7.3:2327805-2327824 | MS.gene050462:CDS | 40.0% |
| AAATCCACCAGCACCAGTAA+TGG | - | chr7.3:2324771-2324790 | None:intergenic | 45.0% | |
| AATCTTGCTGCTGATATGGG+TGG | + | chr7.3:2324965-2324984 | MS.gene050462:CDS | 45.0% | |
| ACATAGCTGACACTCGAGTT+AGG | + | chr7.3:2327259-2327278 | MS.gene050462:intron | 45.0% | |
| ACCTTGAGAGAGAGCCATAT+TGG | + | chr7.3:2324723-2324742 | MS.gene050462:CDS | 45.0% | |
| AGAGCAGCTTGAGAAAGAGA+AGG | + | chr7.3:2327777-2327796 | MS.gene050462:CDS | 45.0% | |
| AGGGTAGATACAAGCACTAG+AGG | - | chr7.3:2325531-2325550 | None:intergenic | 45.0% | |
| ATACCCATCCAACACATTCC+TGG | + | chr7.3:2326691-2326710 | MS.gene050462:CDS | 45.0% | |
| ATCTTGCTGCTGATATGGGT+GGG | + | chr7.3:2324966-2324985 | MS.gene050462:CDS | 45.0% | |
| CACGGACGGTGTCTAAATAA+AGG | - | chr7.3:2327618-2327637 | None:intergenic | 45.0% | |
| CCACTTAGTGGGATAAAGCT+TGG | + | chr7.3:2325374-2325393 | MS.gene050462:intron | 45.0% | |
| CGAAGTGAACCTAGTTGAAC+AGG | - | chr7.3:2327859-2327878 | None:intergenic | 45.0% | |
| CTCGAGTTAGGTCTGATAGA+TGG | + | chr7.3:2327271-2327290 | MS.gene050462:intron | 45.0% | |
| GAAGAATGAGCACATGACTG+AGG | + | chr7.3:2324856-2324875 | MS.gene050462:CDS | 45.0% | |
| GGAGGTGAGTGAGTTAATCT+TGG | + | chr7.3:2327345-2327364 | MS.gene050462:intron | 45.0% | |
| GGCTCCAACAATGAAGTTGA+AGG | + | chr7.3:2326774-2326793 | MS.gene050462:CDS | 45.0% | |
| GGGCGGTTCCATAACATATA+CGG | + | chr7.3:2325798-2325817 | MS.gene050462:CDS | 45.0% | |
| GTGTTGGAAATGTGTCTGAC+AGG | - | chr7.3:2327146-2327165 | None:intergenic | 45.0% | |
| TACAGACCCATTAACACGGA+CGG | - | chr7.3:2327632-2327651 | None:intergenic | 45.0% | |
| TAGACACCGTCCGTGTTAAT+GGG | + | chr7.3:2327623-2327642 | MS.gene050462:intron | 45.0% | |
| TCCAGCCACAAGATGCATAT+GGG | + | chr7.3:2325706-2325725 | MS.gene050462:intron | 45.0% | |
| TTAGACACCGTCCGTGTTAA+TGG | + | chr7.3:2327622-2327641 | MS.gene050462:intron | 45.0% | |
| TTCCAGCCACAAGATGCATA+TGG | + | chr7.3:2325705-2325724 | MS.gene050462:intron | 45.0% | |
| ! | ATGGCTCTCTCTCAAGGTTT+TGG | - | chr7.3:2324721-2324740 | None:intergenic | 45.0% |
| ! | ATTTCCATTACTGGTGCTGG+TGG | + | chr7.3:2324764-2324783 | MS.gene050462:CDS | 45.0% |
| ! | CCAAGCTTTATCCCACTAAG+TGG | - | chr7.3:2325377-2325396 | None:intergenic | 45.0% |
| ! | CTGCTGTTTGAGAGAGCTTA+CGG | + | chr7.3:2325152-2325171 | MS.gene050462:intron | 45.0% |
| ! | GACAGGTTGACACCTTATGA+AGG | - | chr7.3:2327129-2327148 | None:intergenic | 45.0% |
| ! | TATACGGCCCTTTTGGTACA+TGG | + | chr7.3:2325814-2325833 | MS.gene050462:CDS | 45.0% |
| ! | TCATGTCTAAGGCTCATCGA+AGG | - | chr7.3:2327226-2327245 | None:intergenic | 45.0% |
| ! | TTGGAATTGAGTGCCGCATT+GGG | + | chr7.3:2325778-2325797 | MS.gene050462:CDS | 45.0% |
| ! | TTTGGAATTGAGTGCCGCAT+TGG | + | chr7.3:2325777-2325796 | MS.gene050462:CDS | 45.0% |
| !! | TTCCAATATTCACTGGCTCC+CGG | - | chr7.3:2326609-2326628 | None:intergenic | 45.0% |
| AATGGCCCTCGGTCTTAAGA+CGG | - | chr7.3:2324814-2324833 | None:intergenic | 50.0% | |
| ACTCAAGCCCCTGTTCAACT+AGG | + | chr7.3:2327847-2327866 | MS.gene050462:CDS | 50.0% | |
| CAACACATTCCTGGTCCAGA+GGG | + | chr7.3:2326700-2326719 | MS.gene050462:CDS | 50.0% | |
| CAGCTTGAGAAAGAGAAGGC+TGG | + | chr7.3:2327781-2327800 | MS.gene050462:CDS | 50.0% | |
| CAGTAGACACGAGATCAGCA+TGG | - | chr7.3:2326141-2326160 | None:intergenic | 50.0% | |
| CCAAGCCGAAGTCATGTCTA+AGG | - | chr7.3:2327237-2327256 | None:intergenic | 50.0% | |
| CCTTAGACATGACTTCGGCT+TGG | + | chr7.3:2327234-2327253 | MS.gene050462:intron | 50.0% | |
| CTTAAGACGGCGAGCAATGT+GGG | - | chr7.3:2324801-2324820 | None:intergenic | 50.0% | |
| CTTGAGAAAGAGAAGGCTGG+AGG | + | chr7.3:2327784-2327803 | MS.gene050462:CDS | 50.0% | |
| GACCAACAACAAACCTCAGC+AGG | - | chr7.3:2325605-2325624 | None:intergenic | 50.0% | |
| GCCAATATGGCTCTCTCTCA+AGG | - | chr7.3:2324727-2324746 | None:intergenic | 50.0% | |
| GGACCAGGAATGTGTTGGAT+GGG | - | chr7.3:2326697-2326716 | None:intergenic | 50.0% | |
| GGCTTGAGTCGATACCACTT+TGG | - | chr7.3:2327836-2327855 | None:intergenic | 50.0% | |
| GTCTTTCGGCAAAAAGCAGC+AGG | - | chr7.3:2326019-2326038 | None:intergenic | 50.0% | |
| TCCAGCCCATATGCATCTTG+TGG | - | chr7.3:2325714-2325733 | None:intergenic | 50.0% | |
| TCTTAAGACGGCGAGCAATG+TGG | - | chr7.3:2324802-2324821 | None:intergenic | 50.0% | |
| TGGACCAGGAATGTGTTGGA+TGG | - | chr7.3:2326698-2326717 | None:intergenic | 50.0% | |
| TGTTATGGAACCGCCCAATG+CGG | - | chr7.3:2325794-2325813 | None:intergenic | 50.0% | |
| TTCCGGGAGCCAGTGAATAT+TGG | + | chr7.3:2326604-2326623 | MS.gene050462:CDS | 50.0% | |
| ! | AGTGTGTTGAAGGCGTGCTT+CGG | + | chr7.3:2326110-2326129 | MS.gene050462:CDS | 50.0% |
| ! | GGCCCTTTTGGTACATGGAA+AGG | + | chr7.3:2325819-2325838 | MS.gene050462:CDS | 50.0% |
| !! | TTTGTTGTTCGTCGCACAGG+TGG | + | chr7.3:2325980-2325999 | MS.gene050462:intron | 50.0% |
| ACAACAAACCTCAGCAGGCC+AGG | - | chr7.3:2325600-2325619 | None:intergenic | 55.0% | |
| CCAACACATTCCTGGTCCAG+AGG | + | chr7.3:2326699-2326718 | MS.gene050462:CDS | 55.0% | |
| CCTCTGGACCAGGAATGTGT+TGG | - | chr7.3:2326702-2326721 | None:intergenic | 55.0% | |
| GCCACAAGATGCATATGGGC+TGG | + | chr7.3:2325710-2325729 | MS.gene050462:intron | 55.0% | |
| GCCCATATGCATCTTGTGGC+TGG | - | chr7.3:2325710-2325729 | None:intergenic | 55.0% | |
| GCTGCTGATATGGGTGGGAT+GGG | + | chr7.3:2324971-2324990 | MS.gene050462:CDS | 55.0% | |
| TCGCACAGGTGGAAGGGAAA+AGG | + | chr7.3:2325991-2326010 | MS.gene050462:intron | 55.0% | |
| TGCTGCTGATATGGGTGGGA+TGG | + | chr7.3:2324970-2324989 | MS.gene050462:CDS | 55.0% | |
| TGTTCGTCGCACAGGTGGAA+GGG | + | chr7.3:2325985-2326004 | MS.gene050462:intron | 55.0% | |
| TTGTTCGTCGCACAGGTGGA+AGG | + | chr7.3:2325984-2326003 | MS.gene050462:intron | 55.0% | |
| ! | GAATTGAGTGCCGCATTGGG+CGG | + | chr7.3:2325781-2325800 | MS.gene050462:CDS | 55.0% |
| !! | CGCTTTGTTGTTCGTCGCAC+AGG | + | chr7.3:2325977-2325996 | MS.gene050462:intron | 55.0% |
| !! | GGCCTGCTGAGGTTTGTTGT+TGG | + | chr7.3:2325600-2325619 | MS.gene050462:intron | 55.0% |
| AAGACGGCGAGCAATGTGGG+AGG | - | chr7.3:2324798-2324817 | None:intergenic | 60.0% | |
| GCTCGCCGTCTTAAGACCGA+GGG | + | chr7.3:2324806-2324825 | MS.gene050462:CDS | 60.0% | |
| GCTTGAAGGAGGCTGATGCC+TGG | + | chr7.3:2325579-2325598 | MS.gene050462:CDS | 60.0% | |
| GGTTCACTTCGGGCTGCAGA+TGG | + | chr7.3:2327868-2327887 | MS.gene050462:CDS | 60.0% | |
| TGCTCGCCGTCTTAAGACCG+AGG | + | chr7.3:2324805-2324824 | MS.gene050462:CDS | 60.0% | |
| CCACGAACACCCTCTGGACC+AGG | - | chr7.3:2326712-2326731 | None:intergenic | 65.0% | |
| TTGCGGCCACGAACACCCTC+TGG | - | chr7.3:2326718-2326737 | None:intergenic | 65.0% | |
| !! | CCTGGTCCAGAGGGTGTTCG+TGG | + | chr7.3:2326709-2326728 | MS.gene050462:CDS | 65.0% |
| GGCTGATGCCTGGCCTGCTG+AGG | + | chr7.3:2325589-2325608 | MS.gene050462:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 2324677 | 2327900 | 2324677 | ID=MS.gene050462 |
| chr7.3 | mRNA | 2324677 | 2327900 | 2324677 | ID=MS.gene050462.t1;Parent=MS.gene050462 |
| chr7.3 | exon | 2324677 | 2325086 | 2324677 | ID=MS.gene050462.t1.exon1;Parent=MS.gene050462.t1 |
| chr7.3 | CDS | 2324677 | 2325086 | 2324677 | ID=cds.MS.gene050462.t1;Parent=MS.gene050462.t1 |
| chr7.3 | exon | 2325517 | 2325610 | 2325517 | ID=MS.gene050462.t1.exon2;Parent=MS.gene050462.t1 |
| chr7.3 | CDS | 2325517 | 2325610 | 2325517 | ID=cds.MS.gene050462.t1;Parent=MS.gene050462.t1 |
| chr7.3 | exon | 2325711 | 2325840 | 2325711 | ID=MS.gene050462.t1.exon3;Parent=MS.gene050462.t1 |
| chr7.3 | CDS | 2325711 | 2325840 | 2325711 | ID=cds.MS.gene050462.t1;Parent=MS.gene050462.t1 |
| chr7.3 | exon | 2325999 | 2326131 | 2325999 | ID=MS.gene050462.t1.exon4;Parent=MS.gene050462.t1 |
| chr7.3 | CDS | 2325999 | 2326131 | 2325999 | ID=cds.MS.gene050462.t1;Parent=MS.gene050462.t1 |
| chr7.3 | exon | 2326588 | 2326795 | 2326588 | ID=MS.gene050462.t1.exon5;Parent=MS.gene050462.t1 |
| chr7.3 | CDS | 2326588 | 2326795 | 2326588 | ID=cds.MS.gene050462.t1;Parent=MS.gene050462.t1 |
| chr7.3 | exon | 2327745 | 2327900 | 2327745 | ID=MS.gene050462.t1.exon6;Parent=MS.gene050462.t1 |
| chr7.3 | CDS | 2327745 | 2327900 | 2327745 | ID=cds.MS.gene050462.t1;Parent=MS.gene050462.t1 |
| Gene Sequence |
| Protein sequence |
