Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050613.t1 | RHN49510.1 | 97.4 | 231 | 6 | 0 | 8 | 238 | 151 | 381 | 2.90E-119 | 438 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050613.t1 | Q9M153 | 56.3 | 222 | 97 | 0 | 11 | 232 | 159 | 380 | 2.5e-71 | 270.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050613.t1 | G7L3Z5 | 97.4 | 231 | 6 | 0 | 8 | 238 | 151 | 381 | 2.1e-119 | 438.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050613 | MS.gene22825 | 0.841445 | 4.73E-58 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050613.t1 | MTR_7g116870 | 98.268 | 231 | 4 | 0 | 8 | 238 | 151 | 381 | 1.07e-171 | 478 |
| MS.gene050613.t1 | MTR_8g028160 | 66.810 | 232 | 67 | 3 | 8 | 237 | 164 | 387 | 6.01e-112 | 327 |
| MS.gene050613.t1 | MTR_8g089805 | 40.611 | 229 | 131 | 4 | 1 | 225 | 85 | 312 | 2.86e-56 | 182 |
| MS.gene050613.t1 | MTR_8g089805 | 40.611 | 229 | 131 | 4 | 1 | 225 | 153 | 380 | 1.16e-55 | 182 |
| MS.gene050613.t1 | MTR_1g030220 | 38.865 | 229 | 132 | 4 | 7 | 232 | 161 | 384 | 6.14e-55 | 181 |
| MS.gene050613.t1 | MTR_1g030230 | 38.696 | 230 | 133 | 4 | 6 | 232 | 152 | 376 | 7.43e-53 | 175 |
| MS.gene050613.t1 | MTR_1g030265 | 38.865 | 229 | 132 | 4 | 7 | 232 | 126 | 349 | 1.67e-52 | 173 |
| MS.gene050613.t1 | MTR_7g087190 | 38.865 | 229 | 135 | 5 | 7 | 232 | 165 | 391 | 2.34e-52 | 174 |
| MS.gene050613.t1 | MTR_7g033150 | 36.250 | 240 | 137 | 4 | 4 | 234 | 154 | 386 | 8.61e-52 | 172 |
| MS.gene050613.t1 | MTR_7g113860 | 38.182 | 220 | 136 | 0 | 7 | 226 | 81 | 300 | 2.08e-51 | 169 |
| MS.gene050613.t1 | MTR_1g030340 | 38.767 | 227 | 135 | 3 | 7 | 232 | 164 | 387 | 2.29e-51 | 171 |
| MS.gene050613.t1 | MTR_7g113860 | 38.182 | 220 | 136 | 0 | 7 | 226 | 149 | 368 | 1.25e-50 | 169 |
| MS.gene050613.t1 | MTR_7g113860 | 38.182 | 220 | 136 | 0 | 7 | 226 | 155 | 374 | 1.33e-50 | 169 |
| MS.gene050613.t1 | MTR_7g033155 | 35.169 | 236 | 139 | 3 | 7 | 234 | 171 | 400 | 6.54e-50 | 168 |
| MS.gene050613.t1 | MTR_7g033165 | 35.965 | 228 | 137 | 3 | 8 | 232 | 157 | 378 | 7.67e-50 | 167 |
| MS.gene050613.t1 | MTR_1g030275 | 38.696 | 230 | 131 | 5 | 6 | 232 | 159 | 381 | 1.03e-49 | 167 |
| MS.gene050613.t1 | MTR_7g111780 | 42.396 | 217 | 108 | 6 | 20 | 232 | 62 | 265 | 4.52e-48 | 159 |
| MS.gene050613.t1 | MTR_1g030268 | 37.826 | 230 | 133 | 5 | 6 | 232 | 160 | 382 | 5.82e-48 | 162 |
| MS.gene050613.t1 | MTR_7g111780 | 42.396 | 217 | 108 | 6 | 20 | 232 | 161 | 364 | 7.09e-47 | 159 |
| MS.gene050613.t1 | MTR_6g007090 | 35.398 | 226 | 140 | 2 | 7 | 232 | 159 | 378 | 6.15e-45 | 154 |
| MS.gene050613.t1 | MTR_1g082390 | 35.780 | 218 | 139 | 1 | 7 | 223 | 149 | 366 | 4.37e-44 | 152 |
| MS.gene050613.t1 | MTR_8g038680 | 36.957 | 230 | 134 | 5 | 8 | 232 | 149 | 372 | 3.80e-43 | 149 |
| MS.gene050613.t1 | MTR_6g007095 | 35.909 | 220 | 135 | 2 | 8 | 227 | 162 | 375 | 2.18e-41 | 150 |
| MS.gene050613.t1 | MTR_6g007095 | 33.186 | 226 | 130 | 4 | 8 | 232 | 491 | 696 | 3.01e-35 | 132 |
| MS.gene050613.t1 | MTR_6g007100 | 34.802 | 227 | 135 | 2 | 6 | 232 | 148 | 361 | 1.39e-39 | 140 |
| MS.gene050613.t1 | MTR_2g015590 | 36.893 | 206 | 118 | 5 | 26 | 228 | 173 | 369 | 3.27e-36 | 131 |
| MS.gene050613.t1 | MTR_2g015630 | 36.150 | 213 | 123 | 6 | 15 | 224 | 164 | 366 | 1.29e-34 | 127 |
| MS.gene050613.t1 | MTR_2g015580 | 36.744 | 215 | 122 | 7 | 15 | 226 | 179 | 382 | 1.97e-32 | 122 |
| MS.gene050613.t1 | MTR_2g015670 | 33.990 | 203 | 123 | 5 | 26 | 226 | 159 | 352 | 3.29e-29 | 112 |
| MS.gene050613.t1 | MTR_2g015650 | 34.158 | 202 | 122 | 5 | 26 | 225 | 173 | 365 | 8.67e-29 | 112 |
| MS.gene050613.t1 | MTR_3g463960 | 31.373 | 204 | 126 | 4 | 26 | 224 | 184 | 378 | 1.65e-28 | 111 |
| MS.gene050613.t1 | MTR_3g463950 | 31.373 | 204 | 126 | 4 | 26 | 224 | 184 | 378 | 1.65e-28 | 111 |
| MS.gene050613.t1 | MTR_3g463970 | 31.373 | 204 | 126 | 4 | 26 | 224 | 184 | 378 | 1.65e-28 | 111 |
| MS.gene050613.t1 | MTR_3g463940 | 31.373 | 204 | 126 | 4 | 26 | 224 | 184 | 378 | 1.65e-28 | 111 |
| MS.gene050613.t1 | MTR_3g463930 | 31.373 | 204 | 126 | 4 | 26 | 224 | 191 | 385 | 1.82e-28 | 111 |
| MS.gene050613.t1 | MTR_4g104240 | 29.412 | 204 | 130 | 4 | 26 | 228 | 181 | 371 | 1.74e-26 | 105 |
| MS.gene050613.t1 | MTR_2g079090 | 31.905 | 210 | 119 | 5 | 19 | 224 | 160 | 349 | 2.44e-26 | 105 |
| MS.gene050613.t1 | MTR_2g079080 | 31.905 | 210 | 119 | 5 | 19 | 224 | 160 | 349 | 3.42e-26 | 104 |
| MS.gene050613.t1 | MTR_3g069520 | 32.547 | 212 | 124 | 7 | 26 | 229 | 167 | 367 | 7.42e-26 | 103 |
| MS.gene050613.t1 | MTR_0029s0050 | 31.429 | 210 | 120 | 5 | 19 | 224 | 160 | 349 | 1.04e-25 | 103 |
| MS.gene050613.t1 | MTR_8g079050 | 28.436 | 211 | 127 | 5 | 16 | 219 | 167 | 360 | 2.45e-25 | 102 |
| MS.gene050613.t1 | MTR_3g069780 | 31.604 | 212 | 126 | 7 | 26 | 229 | 169 | 369 | 2.63e-25 | 102 |
| MS.gene050613.t1 | MTR_0029s0100 | 31.429 | 210 | 120 | 5 | 19 | 224 | 160 | 349 | 4.67e-25 | 101 |
| MS.gene050613.t1 | MTR_3g438030 | 31.132 | 212 | 127 | 7 | 26 | 229 | 169 | 369 | 4.94e-25 | 101 |
| MS.gene050613.t1 | MTR_7g033165 | 32.877 | 146 | 93 | 2 | 8 | 150 | 157 | 300 | 9.68e-25 | 100 |
| MS.gene050613.t1 | MTR_3g448360 | 31.863 | 204 | 123 | 6 | 26 | 224 | 169 | 361 | 1.04e-24 | 100 |
| MS.gene050613.t1 | MTR_8g012540 | 31.795 | 195 | 122 | 5 | 8 | 197 | 149 | 337 | 6.77e-24 | 98.2 |
| MS.gene050613.t1 | MTR_8g031420 | 29.187 | 209 | 130 | 5 | 16 | 222 | 158 | 350 | 1.97e-23 | 97.1 |
| MS.gene050613.t1 | MTR_8g022790 | 30.698 | 215 | 121 | 6 | 13 | 222 | 157 | 348 | 3.72e-23 | 96.3 |
| MS.gene050613.t1 | MTR_5g074270 | 31.602 | 231 | 119 | 9 | 17 | 234 | 160 | 364 | 7.81e-23 | 95.5 |
| MS.gene050613.t1 | MTR_8g031390 | 28.230 | 209 | 132 | 5 | 16 | 222 | 159 | 351 | 8.83e-23 | 95.5 |
| MS.gene050613.t1 | MTR_1g030268 | 35.135 | 148 | 89 | 3 | 6 | 150 | 160 | 303 | 3.51e-22 | 93.2 |
| MS.gene050613.t1 | MTR_5g087690 | 29.319 | 191 | 107 | 5 | 43 | 227 | 196 | 364 | 1.28e-21 | 92.4 |
| MS.gene050613.t1 | MTR_8g022810 | 31.925 | 213 | 115 | 8 | 10 | 210 | 155 | 349 | 4.03e-21 | 90.9 |
| MS.gene050613.t1 | MTR_3g024510 | 26.728 | 217 | 136 | 5 | 17 | 228 | 164 | 362 | 5.93e-21 | 90.5 |
| MS.gene050613.t1 | MTR_4g122200 | 25.221 | 226 | 145 | 4 | 5 | 223 | 148 | 356 | 8.86e-21 | 90.1 |
| MS.gene050613.t1 | MTR_5g009100 | 24.324 | 222 | 139 | 4 | 16 | 229 | 172 | 372 | 1.06e-20 | 89.7 |
| MS.gene050613.t1 | MTR_2g043980 | 27.948 | 229 | 135 | 6 | 3 | 225 | 148 | 352 | 1.15e-20 | 89.7 |
| MS.gene050613.t1 | MTR_8g031400 | 26.667 | 210 | 140 | 5 | 13 | 222 | 157 | 352 | 1.46e-20 | 89.4 |
| MS.gene050613.t1 | MTR_2g044100 | 27.948 | 229 | 143 | 6 | 2 | 222 | 150 | 364 | 2.97e-20 | 88.6 |
| MS.gene050613.t1 | MTR_3g052580 | 26.761 | 213 | 130 | 5 | 17 | 224 | 160 | 351 | 5.59e-20 | 88.2 |
| MS.gene050613.t1 | MTR_3g052580 | 26.761 | 213 | 130 | 5 | 17 | 224 | 161 | 352 | 7.79e-20 | 87.4 |
| MS.gene050613.t1 | MTR_2g033930 | 25.581 | 215 | 136 | 6 | 15 | 223 | 155 | 351 | 1.02e-19 | 87.0 |
| MS.gene050613.t1 | MTR_5g084790 | 24.413 | 213 | 138 | 5 | 6 | 213 | 148 | 342 | 1.56e-19 | 86.3 |
| MS.gene050613.t1 | MTR_3g052490 | 25.751 | 233 | 140 | 6 | 1 | 224 | 149 | 357 | 1.74e-19 | 86.3 |
| MS.gene050613.t1 | MTR_8g031430 | 27.805 | 205 | 134 | 5 | 16 | 220 | 160 | 350 | 2.97e-19 | 85.5 |
| MS.gene050613.t1 | MTR_1g060490 | 27.273 | 198 | 127 | 5 | 13 | 208 | 148 | 330 | 5.41e-19 | 84.7 |
| MS.gene050613.t1 | MTR_2g033920 | 25.688 | 218 | 132 | 5 | 16 | 223 | 159 | 356 | 6.01e-19 | 84.7 |
| MS.gene050613.t1 | MTR_5g074210 | 31.073 | 177 | 101 | 6 | 59 | 234 | 64 | 220 | 6.48e-19 | 82.4 |
| MS.gene050613.t1 | MTR_8g075230 | 27.358 | 212 | 133 | 6 | 16 | 223 | 162 | 356 | 6.70e-19 | 84.7 |
| MS.gene050613.t1 | MTR_5g022630 | 26.415 | 212 | 135 | 4 | 16 | 223 | 171 | 365 | 1.24e-18 | 84.0 |
| MS.gene050613.t1 | MTR_1g025760 | 26.442 | 208 | 130 | 4 | 16 | 218 | 206 | 395 | 3.98e-18 | 82.8 |
| MS.gene050613.t1 | MTR_0565s0010 | 25.551 | 227 | 133 | 7 | 13 | 227 | 154 | 356 | 4.02e-18 | 82.4 |
| MS.gene050613.t1 | MTR_1g025680 | 26.415 | 212 | 134 | 4 | 16 | 223 | 161 | 354 | 4.95e-18 | 82.8 |
| MS.gene050613.t1 | MTR_0127s0040 | 24.576 | 236 | 150 | 5 | 1 | 230 | 21 | 234 | 6.30e-18 | 80.1 |
| MS.gene050613.t1 | MTR_5g093090 | 27.064 | 218 | 123 | 6 | 17 | 224 | 162 | 353 | 7.53e-18 | 81.6 |
| MS.gene050613.t1 | MTR_3g082830 | 26.214 | 206 | 129 | 6 | 13 | 213 | 161 | 348 | 9.37e-18 | 81.3 |
| MS.gene050613.t1 | MTR_5g083040 | 28.638 | 213 | 126 | 8 | 2 | 206 | 146 | 340 | 1.03e-17 | 81.3 |
| MS.gene050613.t1 | MTR_8g087890 | 24.658 | 219 | 137 | 5 | 17 | 227 | 156 | 354 | 1.52e-17 | 80.9 |
| MS.gene050613.t1 | MTR_2g084585 | 25.943 | 212 | 136 | 4 | 10 | 217 | 150 | 344 | 2.61e-17 | 80.1 |
| MS.gene050613.t1 | MTR_3g464730 | 26.442 | 208 | 127 | 5 | 13 | 213 | 151 | 339 | 2.75e-17 | 80.1 |
| MS.gene050613.t1 | MTR_1g025720 | 25.743 | 202 | 128 | 4 | 16 | 213 | 163 | 346 | 2.98e-17 | 80.1 |
| MS.gene050613.t1 | MTR_4g056280 | 27.976 | 168 | 104 | 3 | 45 | 212 | 189 | 339 | 5.26e-17 | 79.3 |
| MS.gene050613.t1 | MTR_5g084750 | 23.529 | 204 | 129 | 5 | 10 | 206 | 150 | 333 | 6.08e-17 | 79.0 |
| MS.gene050613.t1 | MTR_3g052480 | 24.155 | 207 | 132 | 6 | 17 | 219 | 167 | 352 | 1.53e-16 | 78.2 |
| MS.gene050613.t1 | MTR_3g114120 | 28.641 | 206 | 125 | 5 | 16 | 217 | 173 | 360 | 1.63e-16 | 77.8 |
| MS.gene050613.t1 | MTR_1g082410 | 25.991 | 227 | 105 | 5 | 1 | 227 | 142 | 305 | 1.78e-16 | 77.4 |
| MS.gene050613.t1 | MTR_1g025780 | 27.184 | 206 | 127 | 6 | 16 | 217 | 167 | 353 | 1.84e-16 | 77.8 |
| MS.gene050613.t1 | MTR_1108s0010 | 28.947 | 152 | 91 | 3 | 61 | 212 | 64 | 198 | 2.11e-16 | 75.5 |
| MS.gene050613.t1 | MTR_1g025700 | 25.243 | 206 | 132 | 4 | 16 | 217 | 176 | 363 | 2.13e-16 | 77.8 |
| MS.gene050613.t1 | MTR_5g078210 | 25.500 | 200 | 123 | 6 | 19 | 213 | 155 | 333 | 2.23e-16 | 77.4 |
| MS.gene050613.t1 | MTR_4g035353 | 26.522 | 230 | 137 | 7 | 3 | 223 | 145 | 351 | 2.97e-16 | 77.0 |
| MS.gene050613.t1 | MTR_2g461580 | 23.932 | 234 | 141 | 5 | 7 | 233 | 148 | 351 | 3.01e-16 | 77.0 |
| MS.gene050613.t1 | MTR_3g098270 | 27.650 | 217 | 125 | 6 | 17 | 225 | 163 | 355 | 3.22e-16 | 77.4 |
| MS.gene050613.t1 | MTR_2g100620 | 24.775 | 222 | 140 | 4 | 7 | 217 | 141 | 346 | 4.57e-16 | 76.6 |
| MS.gene050613.t1 | MTR_3g114090 | 27.723 | 202 | 123 | 5 | 16 | 212 | 163 | 346 | 4.69e-16 | 76.6 |
| MS.gene050613.t1 | MTR_3g435540 | 24.413 | 213 | 136 | 5 | 10 | 217 | 145 | 337 | 1.89e-15 | 74.7 |
| MS.gene050613.t1 | MTR_8g074570 | 25.121 | 207 | 132 | 5 | 16 | 219 | 170 | 356 | 2.46e-15 | 74.7 |
| MS.gene050613.t1 | MTR_1g060500 | 25.248 | 202 | 132 | 5 | 13 | 208 | 153 | 341 | 2.95e-15 | 74.3 |
| MS.gene050613.t1 | MTR_4g056160 | 28.743 | 167 | 103 | 3 | 45 | 210 | 186 | 337 | 3.62e-15 | 73.9 |
| MS.gene050613.t1 | MTR_5g084770 | 23.445 | 209 | 132 | 5 | 13 | 213 | 151 | 339 | 3.63e-15 | 73.9 |
| MS.gene050613.t1 | MTR_8g075220 | 23.697 | 211 | 139 | 4 | 13 | 218 | 167 | 360 | 4.40e-15 | 73.9 |
| MS.gene050613.t1 | MTR_1g025910 | 29.245 | 212 | 120 | 7 | 13 | 217 | 160 | 348 | 5.40e-15 | 73.6 |
| MS.gene050613.t1 | MTR_1g024890 | 27.962 | 211 | 127 | 6 | 16 | 220 | 158 | 349 | 6.13e-15 | 73.6 |
| MS.gene050613.t1 | MTR_8g014910 | 25.000 | 204 | 133 | 5 | 13 | 212 | 155 | 342 | 6.39e-15 | 73.2 |
| MS.gene050613.t1 | MTR_8g031390 | 26.946 | 167 | 108 | 4 | 16 | 180 | 159 | 313 | 1.06e-14 | 72.4 |
| MS.gene050613.t1 | MTR_7g008060 | 26.168 | 214 | 127 | 6 | 16 | 220 | 146 | 337 | 1.13e-14 | 72.8 |
| MS.gene050613.t1 | MTR_8g074580 | 25.105 | 239 | 139 | 5 | 13 | 219 | 173 | 403 | 2.06e-14 | 72.0 |
| MS.gene050613.t1 | MTR_2g015080 | 26.601 | 203 | 120 | 7 | 17 | 208 | 168 | 352 | 2.14e-14 | 72.0 |
| MS.gene050613.t1 | MTR_7g116520 | 25.118 | 211 | 133 | 5 | 16 | 220 | 160 | 351 | 2.53e-14 | 71.6 |
| MS.gene050613.t1 | MTR_5g022640 | 24.186 | 215 | 136 | 6 | 16 | 223 | 170 | 364 | 3.37e-14 | 71.2 |
| MS.gene050613.t1 | MTR_4g108690 | 23.881 | 201 | 128 | 4 | 22 | 217 | 161 | 341 | 9.46e-14 | 70.1 |
| MS.gene050613.t1 | MTR_7g116570 | 24.424 | 217 | 137 | 6 | 16 | 224 | 160 | 357 | 9.63e-14 | 70.1 |
| MS.gene050613.t1 | MTR_8g075200 | 23.923 | 209 | 138 | 5 | 13 | 217 | 164 | 355 | 1.29e-13 | 69.7 |
| MS.gene050613.t1 | MTR_0009s0250 | 30.769 | 143 | 90 | 3 | 17 | 159 | 160 | 293 | 1.85e-13 | 68.9 |
| MS.gene050613.t1 | MTR_1g069175 | 26.415 | 212 | 130 | 5 | 16 | 220 | 160 | 352 | 1.92e-13 | 69.3 |
| MS.gene050613.t1 | MTR_7g116510 | 24.766 | 214 | 133 | 6 | 15 | 220 | 150 | 343 | 2.99e-13 | 68.6 |
| MS.gene050613.t1 | MTR_3g021460 | 24.424 | 217 | 127 | 5 | 17 | 228 | 158 | 342 | 4.57e-13 | 67.8 |
| MS.gene050613.t1 | MTR_3g005650 | 25.532 | 188 | 119 | 4 | 44 | 231 | 186 | 352 | 6.55e-13 | 67.4 |
| MS.gene050613.t1 | MTR_2g015590 | 30.709 | 127 | 86 | 2 | 26 | 150 | 173 | 299 | 8.76e-13 | 67.0 |
| MS.gene050613.t1 | MTR_3g005660 | 24.434 | 221 | 143 | 5 | 17 | 230 | 163 | 366 | 8.96e-13 | 67.0 |
| MS.gene050613.t1 | MTR_1g060520 | 22.707 | 229 | 135 | 8 | 1 | 208 | 98 | 305 | 4.44e-12 | 65.1 |
| MS.gene050613.t1 | MTR_3g023220 | 22.886 | 201 | 119 | 5 | 17 | 211 | 158 | 328 | 1.24e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050613.t1 | AT4G01130 | 60.360 | 222 | 88 | 0 | 11 | 232 | 73 | 294 | 2.13e-98 | 289 |
| MS.gene050613.t1 | AT4G01130 | 60.360 | 222 | 88 | 0 | 11 | 232 | 159 | 380 | 3.01e-97 | 289 |
| MS.gene050613.t1 | AT4G01130 | 60.000 | 140 | 56 | 0 | 11 | 150 | 159 | 298 | 2.85e-56 | 182 |
| MS.gene050613.t1 | AT3G26430 | 38.362 | 232 | 140 | 3 | 3 | 232 | 148 | 378 | 8.51e-52 | 172 |
| MS.gene050613.t1 | AT1G67830 | 39.269 | 219 | 130 | 3 | 3 | 219 | 147 | 364 | 2.75e-50 | 168 |
| MS.gene050613.t1 | AT1G54790 | 38.117 | 223 | 138 | 0 | 7 | 229 | 151 | 373 | 2.46e-49 | 166 |
| MS.gene050613.t1 | AT1G54790 | 38.117 | 223 | 138 | 0 | 7 | 229 | 152 | 374 | 3.74e-49 | 166 |
| MS.gene050613.t1 | AT5G14450 | 35.526 | 228 | 140 | 4 | 10 | 235 | 167 | 389 | 7.90e-47 | 160 |
| MS.gene050613.t1 | AT1G56670 | 37.209 | 215 | 122 | 4 | 20 | 232 | 168 | 371 | 1.02e-46 | 159 |
| MS.gene050613.t1 | AT1G54790 | 35.341 | 249 | 135 | 3 | 7 | 229 | 151 | 399 | 6.40e-44 | 152 |
| MS.gene050613.t1 | AT1G09390 | 35.047 | 214 | 128 | 3 | 20 | 232 | 165 | 368 | 3.11e-42 | 147 |
| MS.gene050613.t1 | AT3G05180 | 34.272 | 213 | 140 | 0 | 11 | 223 | 160 | 372 | 1.58e-39 | 140 |
| MS.gene050613.t1 | AT3G27950 | 32.889 | 225 | 136 | 3 | 14 | 234 | 159 | 372 | 2.02e-37 | 135 |
| MS.gene050613.t1 | AT1G28580 | 36.232 | 207 | 115 | 6 | 26 | 226 | 97 | 292 | 2.34e-35 | 128 |
| MS.gene050613.t1 | AT1G28580 | 36.232 | 207 | 115 | 6 | 26 | 226 | 178 | 373 | 9.65e-35 | 128 |
| MS.gene050613.t1 | AT3G62280 | 35.714 | 210 | 119 | 3 | 20 | 224 | 159 | 357 | 2.39e-34 | 126 |
| MS.gene050613.t1 | AT1G28600 | 38.624 | 189 | 100 | 5 | 43 | 226 | 189 | 366 | 4.04e-34 | 126 |
| MS.gene050613.t1 | AT1G31550 | 36.073 | 219 | 122 | 7 | 15 | 226 | 164 | 371 | 1.38e-33 | 125 |
| MS.gene050613.t1 | AT1G28610 | 36.408 | 206 | 115 | 5 | 26 | 226 | 172 | 366 | 4.91e-33 | 123 |
| MS.gene050613.t1 | AT1G28590 | 37.915 | 211 | 110 | 7 | 26 | 228 | 177 | 374 | 5.43e-33 | 123 |
| MS.gene050613.t1 | AT2G27360 | 38.503 | 187 | 103 | 4 | 43 | 226 | 193 | 370 | 7.03e-33 | 123 |
| MS.gene050613.t1 | AT1G31550 | 35.780 | 218 | 121 | 7 | 15 | 226 | 164 | 368 | 5.37e-32 | 120 |
| MS.gene050613.t1 | AT1G28640 | 35.829 | 187 | 108 | 5 | 43 | 226 | 194 | 371 | 4.75e-31 | 118 |
| MS.gene050613.t1 | AT1G28570 | 33.019 | 212 | 112 | 7 | 22 | 226 | 19 | 207 | 2.88e-30 | 112 |
| MS.gene050613.t1 | AT1G28570 | 33.019 | 212 | 112 | 7 | 22 | 226 | 110 | 298 | 2.48e-29 | 112 |
| MS.gene050613.t1 | AT1G28570 | 33.019 | 212 | 112 | 7 | 22 | 226 | 182 | 370 | 7.25e-29 | 112 |
| MS.gene050613.t1 | AT1G28650 | 35.484 | 186 | 109 | 5 | 43 | 226 | 197 | 373 | 8.44e-29 | 112 |
| MS.gene050613.t1 | AT5G45910 | 32.195 | 205 | 127 | 4 | 26 | 226 | 175 | 371 | 2.17e-27 | 108 |
| MS.gene050613.t1 | AT5G03980 | 30.332 | 211 | 130 | 7 | 13 | 218 | 114 | 312 | 9.15e-26 | 102 |
| MS.gene050613.t1 | AT1G28670 | 34.043 | 188 | 110 | 5 | 43 | 226 | 195 | 372 | 2.52e-25 | 102 |
| MS.gene050613.t1 | AT3G48460 | 30.693 | 202 | 125 | 5 | 26 | 226 | 183 | 370 | 1.37e-24 | 100 |
| MS.gene050613.t1 | AT1G28660 | 33.333 | 219 | 127 | 8 | 15 | 226 | 165 | 371 | 2.15e-24 | 100 |
| MS.gene050613.t1 | AT1G28660 | 33.333 | 219 | 126 | 9 | 15 | 226 | 165 | 370 | 4.58e-23 | 96.7 |
| MS.gene050613.t1 | AT2G23540 | 30.332 | 211 | 123 | 5 | 16 | 219 | 178 | 371 | 6.05e-23 | 96.3 |
| MS.gene050613.t1 | AT1G06990 | 28.302 | 212 | 126 | 5 | 13 | 217 | 160 | 352 | 6.33e-23 | 95.9 |
| MS.gene050613.t1 | AT1G56670 | 37.594 | 133 | 78 | 3 | 20 | 150 | 168 | 297 | 9.31e-23 | 94.4 |
| MS.gene050613.t1 | AT3G50400 | 29.596 | 223 | 127 | 7 | 16 | 228 | 164 | 366 | 1.00e-22 | 95.5 |
| MS.gene050613.t1 | AT2G42990 | 26.829 | 205 | 123 | 5 | 16 | 213 | 154 | 338 | 8.63e-22 | 92.4 |
| MS.gene050613.t1 | AT1G58430 | 27.411 | 197 | 121 | 4 | 16 | 207 | 162 | 341 | 3.48e-20 | 88.2 |
| MS.gene050613.t1 | AT1G29670 | 26.609 | 233 | 144 | 6 | 1 | 227 | 143 | 354 | 4.73e-20 | 87.8 |
| MS.gene050613.t1 | AT1G29670 | 26.496 | 234 | 145 | 6 | 1 | 228 | 211 | 423 | 8.13e-20 | 87.8 |
| MS.gene050613.t1 | AT5G22810 | 28.502 | 207 | 125 | 6 | 16 | 217 | 163 | 351 | 9.35e-20 | 87.0 |
| MS.gene050613.t1 | AT1G75880 | 27.053 | 207 | 130 | 4 | 16 | 218 | 179 | 368 | 1.39e-19 | 86.7 |
| MS.gene050613.t1 | AT1G53990 | 28.230 | 209 | 132 | 5 | 16 | 219 | 153 | 348 | 1.44e-19 | 86.7 |
| MS.gene050613.t1 | AT5G15720 | 28.440 | 218 | 127 | 5 | 17 | 224 | 126 | 324 | 1.46e-19 | 86.3 |
| MS.gene050613.t1 | AT1G75880 | 27.053 | 207 | 130 | 4 | 16 | 218 | 178 | 367 | 1.64e-19 | 86.7 |
| MS.gene050613.t1 | AT5G15720 | 28.440 | 218 | 127 | 5 | 17 | 224 | 157 | 355 | 2.66e-19 | 85.9 |
| MS.gene050613.t1 | AT1G53920 | 25.463 | 216 | 142 | 5 | 10 | 221 | 166 | 366 | 1.33e-18 | 84.0 |
| MS.gene050613.t1 | AT3G14225 | 28.365 | 208 | 133 | 4 | 16 | 219 | 162 | 357 | 1.60e-18 | 83.6 |
| MS.gene050613.t1 | AT5G40990 | 28.436 | 211 | 129 | 5 | 16 | 219 | 162 | 357 | 1.66e-18 | 83.6 |
| MS.gene050613.t1 | AT3G14225 | 28.365 | 208 | 133 | 4 | 16 | 219 | 166 | 361 | 1.68e-18 | 83.6 |
| MS.gene050613.t1 | AT2G31550 | 25.728 | 206 | 125 | 5 | 15 | 212 | 20 | 205 | 1.69e-18 | 81.3 |
| MS.gene050613.t1 | AT2G30310 | 27.723 | 202 | 118 | 6 | 15 | 208 | 160 | 341 | 2.41e-18 | 83.2 |
| MS.gene050613.t1 | AT5G41890 | 28.571 | 217 | 127 | 6 | 15 | 219 | 159 | 359 | 5.38e-18 | 82.4 |
| MS.gene050613.t1 | AT4G26790 | 25.225 | 222 | 138 | 5 | 7 | 217 | 139 | 343 | 1.01e-17 | 81.3 |
| MS.gene050613.t1 | AT4G26790 | 25.225 | 222 | 138 | 5 | 7 | 217 | 139 | 343 | 1.01e-17 | 81.3 |
| MS.gene050613.t1 | AT2G31540 | 25.728 | 206 | 125 | 5 | 15 | 212 | 161 | 346 | 1.47e-17 | 80.9 |
| MS.gene050613.t1 | AT3G16370 | 27.168 | 173 | 110 | 4 | 50 | 222 | 194 | 350 | 2.09e-17 | 80.5 |
| MS.gene050613.t1 | AT2G04570 | 25.112 | 223 | 140 | 7 | 6 | 221 | 144 | 346 | 2.52e-17 | 80.1 |
| MS.gene050613.t1 | AT2G30220 | 26.961 | 204 | 121 | 5 | 15 | 210 | 159 | 342 | 7.54e-17 | 79.0 |
| MS.gene050613.t1 | AT1G75890 | 28.079 | 203 | 121 | 5 | 16 | 212 | 174 | 357 | 7.70e-17 | 79.0 |
| MS.gene050613.t1 | AT1G75890 | 28.079 | 203 | 121 | 5 | 16 | 212 | 187 | 370 | 7.98e-17 | 79.0 |
| MS.gene050613.t1 | AT1G75890 | 28.774 | 212 | 121 | 6 | 16 | 221 | 203 | 390 | 8.08e-17 | 79.0 |
| MS.gene050613.t1 | AT3G62280 | 35.938 | 128 | 74 | 2 | 20 | 142 | 159 | 283 | 8.78e-17 | 78.2 |
| MS.gene050613.t1 | AT4G10950 | 23.982 | 221 | 143 | 5 | 13 | 227 | 190 | 391 | 8.92e-17 | 79.0 |
| MS.gene050613.t1 | AT4G10950 | 23.982 | 221 | 143 | 5 | 13 | 227 | 194 | 395 | 8.98e-17 | 79.0 |
| MS.gene050613.t1 | AT2G24560 | 25.871 | 201 | 121 | 5 | 15 | 207 | 160 | 340 | 1.65e-16 | 77.8 |
| MS.gene050613.t1 | AT1G29660 | 24.786 | 234 | 126 | 6 | 13 | 227 | 153 | 355 | 3.69e-16 | 77.0 |
| MS.gene050613.t1 | AT1G71691 | 25.352 | 213 | 134 | 4 | 15 | 222 | 77 | 269 | 6.06e-16 | 75.5 |
| MS.gene050613.t1 | AT1G75900 | 25.243 | 206 | 134 | 5 | 16 | 218 | 169 | 357 | 7.94e-16 | 75.9 |
| MS.gene050613.t1 | AT1G71691 | 25.352 | 213 | 134 | 4 | 15 | 222 | 178 | 370 | 8.86e-16 | 75.9 |
| MS.gene050613.t1 | AT1G53940 | 26.316 | 209 | 136 | 4 | 16 | 219 | 164 | 359 | 1.29e-15 | 75.5 |
| MS.gene050613.t1 | AT3G14820 | 27.885 | 208 | 121 | 7 | 16 | 217 | 158 | 342 | 1.48e-15 | 75.1 |
| MS.gene050613.t1 | AT5G03820 | 27.841 | 176 | 106 | 5 | 45 | 217 | 192 | 349 | 2.22e-15 | 74.7 |
| MS.gene050613.t1 | AT5G03610 | 25.701 | 214 | 138 | 6 | 14 | 222 | 156 | 353 | 3.37e-15 | 74.3 |
| MS.gene050613.t1 | AT5G03820 | 28.488 | 172 | 102 | 5 | 49 | 217 | 224 | 377 | 4.19e-15 | 73.9 |
| MS.gene050613.t1 | AT1G71250 | 25.116 | 215 | 137 | 6 | 15 | 223 | 165 | 361 | 5.39e-15 | 73.6 |
| MS.gene050613.t1 | AT3G53100 | 24.519 | 208 | 132 | 5 | 16 | 217 | 155 | 343 | 5.45e-15 | 73.6 |
| MS.gene050613.t1 | AT5G03810 | 26.012 | 173 | 112 | 3 | 45 | 217 | 189 | 345 | 5.73e-15 | 73.6 |
| MS.gene050613.t1 | AT2G19060 | 26.609 | 233 | 133 | 10 | 3 | 224 | 136 | 341 | 6.60e-15 | 73.2 |
| MS.gene050613.t1 | AT2G03980 | 29.268 | 205 | 116 | 8 | 17 | 216 | 172 | 352 | 8.06e-15 | 73.2 |
| MS.gene050613.t1 | AT2G03980 | 29.268 | 205 | 116 | 8 | 17 | 216 | 172 | 352 | 8.06e-15 | 73.2 |
| MS.gene050613.t1 | AT2G03980 | 29.268 | 205 | 116 | 8 | 17 | 216 | 172 | 352 | 8.06e-15 | 73.2 |
| MS.gene050613.t1 | AT2G03980 | 29.268 | 205 | 116 | 8 | 17 | 216 | 172 | 352 | 8.06e-15 | 73.2 |
| MS.gene050613.t1 | AT5G45950 | 25.481 | 208 | 127 | 7 | 11 | 213 | 160 | 344 | 8.70e-15 | 73.2 |
| MS.gene050613.t1 | AT5G37690 | 26.263 | 198 | 120 | 6 | 20 | 212 | 150 | 326 | 1.71e-14 | 72.0 |
| MS.gene050613.t1 | AT5G37690 | 26.263 | 198 | 120 | 6 | 20 | 212 | 158 | 334 | 1.73e-14 | 72.0 |
| MS.gene050613.t1 | AT2G19050 | 25.108 | 231 | 137 | 8 | 3 | 224 | 137 | 340 | 4.22e-14 | 70.9 |
| MS.gene050613.t1 | AT4G28780 | 27.273 | 220 | 129 | 7 | 15 | 224 | 156 | 354 | 4.25e-14 | 71.2 |
| MS.gene050613.t1 | AT5G33370 | 24.645 | 211 | 134 | 5 | 16 | 220 | 156 | 347 | 7.89e-14 | 70.5 |
| MS.gene050613.t1 | AT2G40250 | 22.388 | 201 | 139 | 5 | 16 | 212 | 162 | 349 | 9.45e-14 | 70.1 |
| MS.gene050613.t1 | AT5G63170 | 30.818 | 159 | 80 | 4 | 50 | 208 | 193 | 321 | 1.81e-13 | 68.9 |
| MS.gene050613.t1 | AT1G54030 | 27.551 | 196 | 114 | 6 | 19 | 209 | 165 | 337 | 2.18e-13 | 69.3 |
| MS.gene050613.t1 | AT1G71120 | 24.885 | 217 | 140 | 6 | 8 | 220 | 146 | 343 | 3.76e-13 | 68.2 |
| MS.gene050613.t1 | AT5G08460 | 25.463 | 216 | 134 | 7 | 17 | 223 | 176 | 373 | 4.51e-13 | 68.2 |
| MS.gene050613.t1 | AT5G45960 | 25.253 | 198 | 123 | 5 | 17 | 206 | 174 | 354 | 5.09e-13 | 68.2 |
| MS.gene050613.t1 | AT5G45670 | 25.490 | 204 | 124 | 8 | 17 | 212 | 155 | 338 | 8.06e-13 | 67.4 |
| MS.gene050613.t1 | AT1G33811 | 23.958 | 192 | 130 | 4 | 44 | 234 | 194 | 370 | 1.18e-12 | 67.0 |
| MS.gene050613.t1 | AT4G18970 | 23.913 | 230 | 149 | 8 | 13 | 234 | 150 | 361 | 1.19e-12 | 67.0 |
| MS.gene050613.t1 | AT1G20130 | 24.260 | 169 | 108 | 3 | 50 | 218 | 358 | 506 | 1.37e-12 | 67.0 |
| MS.gene050613.t1 | AT1G20130 | 24.260 | 169 | 108 | 3 | 50 | 218 | 378 | 526 | 1.51e-12 | 67.0 |
| MS.gene050613.t1 | AT4G18970 | 23.913 | 230 | 149 | 9 | 13 | 234 | 150 | 361 | 1.66e-12 | 66.6 |
| MS.gene050613.t1 | AT1G23500 | 25.366 | 205 | 125 | 5 | 16 | 219 | 162 | 339 | 1.94e-12 | 66.2 |
| MS.gene050613.t1 | AT1G59406 | 25.000 | 164 | 100 | 5 | 58 | 218 | 199 | 342 | 2.80e-12 | 65.9 |
| MS.gene050613.t1 | AT1G59030 | 25.000 | 164 | 100 | 5 | 58 | 218 | 199 | 342 | 2.80e-12 | 65.9 |
| MS.gene050613.t1 | AT1G58725 | 25.000 | 164 | 100 | 5 | 58 | 218 | 199 | 342 | 2.80e-12 | 65.9 |
| MS.gene050613.t1 | AT5G42170 | 25.150 | 167 | 107 | 4 | 55 | 221 | 216 | 364 | 3.63e-12 | 65.5 |
| MS.gene050613.t1 | AT1G20132 | 24.312 | 218 | 138 | 7 | 2 | 213 | 175 | 371 | 2.42e-11 | 63.2 |
| MS.gene050613.t1 | AT4G30140 | 25.701 | 214 | 128 | 7 | 17 | 224 | 152 | 340 | 2.50e-11 | 62.8 |
| MS.gene050613.t1 | AT3G04290 | 24.057 | 212 | 136 | 6 | 15 | 220 | 154 | 346 | 4.20e-11 | 62.4 |
| MS.gene050613.t1 | AT1G20135 | 23.529 | 170 | 100 | 2 | 43 | 212 | 187 | 326 | 8.60e-11 | 61.2 |
Find 57 sgRNAs with CRISPR-Local
Find 71 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATAACCTATGCTATTCTTAA+TGG | 0.135679 | 7.3:+1299687 | MS.gene050613:CDS |
| AGTTCAGACCTTGACGAATT+TGG | 0.191181 | 7.3:+1299237 | MS.gene050613:CDS |
| TCTTGGTGGGAGAACATTTA+TGG | 0.217034 | 7.3:+1299155 | MS.gene050613:CDS |
| ATAAGTTACTCTTACTTTAA+TGG | 0.231194 | 7.3:-1299013 | None:intergenic |
| GTATTTCCACAGTAAACTTT+AGG | 0.285895 | 7.3:-1299561 | None:intergenic |
| GGTTGGAAGTGAAATCATTT+TGG | 0.297243 | 7.3:-1298924 | None:intergenic |
| GGAAATACAAAGGAGATAAA+TGG | 0.320143 | 7.3:+1299576 | MS.gene050613:CDS |
| CATTGTGATCTTCAACCTAT+AGG | 0.348100 | 7.3:+1299744 | MS.gene050613:CDS |
| CTTCAAATGGATCAACCTAT+AGG | 0.355948 | 7.3:-1299759 | None:intergenic |
| TATATCTGGTGATGGAAGTT+TGG | 0.358262 | 7.3:-1298869 | None:intergenic |
| TATAAGCTTGCTTGCAGCTT+CGG | 0.371154 | 7.3:-1299667 | None:intergenic |
| ACAAAAGCATGTTGTGGATA+TGG | 0.389909 | 7.3:+1299516 | MS.gene050613:CDS |
| AGCATCTGAGAGACTTTCTC+TGG | 0.391718 | 7.3:-1299328 | None:intergenic |
| AGATCACAATGTTCCTGAAA+TGG | 0.396329 | 7.3:-1299732 | None:intergenic |
| TATGAAACAGGTCTTCAATA+TGG | 0.402022 | 7.3:+1299492 | MS.gene050613:intron |
| TTCCGGCATCCTACTTCTCA+TGG | 0.414441 | 7.3:+1299393 | MS.gene050613:CDS |
| ACTTCCAACCTAGCAGTCAT+TGG | 0.432851 | 7.3:+1298937 | MS.gene050613:CDS |
| TCCCAACTCACATAGTTGTA+AGG | 0.444412 | 7.3:-1299630 | None:intergenic |
| CTTCCATCACCAGATATACT+TGG | 0.446578 | 7.3:+1298874 | MS.gene050613:CDS |
| TTGTAGGAGCTATATAATCT+TGG | 0.478024 | 7.3:+1299138 | MS.gene050613:intron |
| CCTTGACGAATTTGGATGCA+TGG | 0.485707 | 7.3:+1299245 | MS.gene050613:CDS |
| TACAACTATGTGAGTTGGGA+TGG | 0.486217 | 7.3:+1299633 | MS.gene050613:CDS |
| CCCTTACAACTATGTGAGTT+GGG | 0.488599 | 7.3:+1299629 | MS.gene050613:CDS |
| GGAAGTTCTACTAAGAATGA+AGG | 0.495691 | 7.3:-1299207 | None:intergenic |
| CAATGTTCCTGAAATGGAAA+AGG | 0.495858 | 7.3:-1299726 | None:intergenic |
| TGTGCCAATGACTGCTAGGT+TGG | 0.505293 | 7.3:-1298941 | None:intergenic |
| ACCCTTACAACTATGTGAGT+TGG | 0.506490 | 7.3:+1299628 | MS.gene050613:CDS |
| TAGGAGCTATATAATCTTGG+TGG | 0.518098 | 7.3:+1299141 | MS.gene050613:intron |
| ACAACTATGTGAGTTGGGAT+GGG | 0.528306 | 7.3:+1299634 | MS.gene050613:CDS |
| TCAAGGTCTGAACTATTATG+AGG | 0.530045 | 7.3:-1299228 | None:intergenic |
| AAATTTGTGAAACAACTTGT+GGG | 0.532765 | 7.3:-1298984 | None:intergenic |
| AATGAAGGGTAGCACCCTAC+TGG | 0.532982 | 7.3:-1299192 | None:intergenic |
| TACTTAATCTTGCACCAGTA+GGG | 0.541138 | 7.3:+1299178 | MS.gene050613:CDS |
| AAGCTTGCTTGCAGCTTCGG+TGG | 0.542742 | 7.3:-1299664 | None:intergenic |
| TTCTTACAACAATGCAGTAG+TGG | 0.550306 | 7.3:+1299269 | MS.gene050613:CDS |
| GAAATTTGTGAAACAACTTG+TGG | 0.551389 | 7.3:-1298985 | None:intergenic |
| TTTGATCCTAAAGTTTACTG+TGG | 0.552886 | 7.3:+1299555 | MS.gene050613:CDS |
| TTTCCAAGTATATCTGGTGA+TGG | 0.553970 | 7.3:-1298877 | None:intergenic |
| AACCATGAGAAGTAGGATGC+CGG | 0.560111 | 7.3:-1299395 | None:intergenic |
| CGATACCTACACTGTTCTGT+TGG | 0.565280 | 7.3:+1299365 | MS.gene050613:CDS |
| GTACTTAATCTTGCACCAGT+AGG | 0.570862 | 7.3:+1299177 | MS.gene050613:CDS |
| CCCAACTCACATAGTTGTAA+GGG | 0.576209 | 7.3:-1299629 | None:intergenic |
| TGTTCCTGAAATGGAAAAGG+AGG | 0.581672 | 7.3:-1299723 | None:intergenic |
| AACCTAGCAGTCATTGGCAC+AGG | 0.585417 | 7.3:+1298943 | MS.gene050613:CDS |
| GAAGTTCTACTAAGAATGAA+GGG | 0.588435 | 7.3:-1299206 | None:intergenic |
| CTAGCAGTCATTGGCACAGG+TGG | 0.589232 | 7.3:+1298946 | MS.gene050613:CDS |
| GCATGTTGTGGATATGGTGG+AGG | 0.601305 | 7.3:+1299522 | MS.gene050613:CDS |
| TATGGTACAAAAGCATGTTG+TGG | 0.602150 | 7.3:+1299510 | MS.gene050613:CDS |
| ATGGTTCGGAAAATTACGTA+TGG | 0.603174 | 7.3:+1298762 | MS.gene050613:CDS |
| AGATCCATTAAGAATAGCAT+AGG | 0.606063 | 7.3:-1299691 | None:intergenic |
| GTGTTTGAACCATGAGAAGT+AGG | 0.606752 | 7.3:-1299402 | None:intergenic |
| AGGAGCTATATAATCTTGGT+GGG | 0.609668 | 7.3:+1299142 | MS.gene050613:intron |
| CACCTGTGCCAATGACTGCT+AGG | 0.626922 | 7.3:-1298945 | None:intergenic |
| AAGCTCCAACAGAACAGTGT+AGG | 0.634682 | 7.3:-1299370 | None:intergenic |
| CCATGCATCCAAATTCGTCA+AGG | 0.645133 | 7.3:-1299245 | None:intergenic |
| AAAGCATGTTGTGGATATGG+TGG | 0.654269 | 7.3:+1299519 | MS.gene050613:CDS |
| AGTTTACTGTGGAAATACAA+AGG | 0.664418 | 7.3:+1299566 | MS.gene050613:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAACAAAAATAAACATTAA+GGG | - | chr7.3:1299473-1299492 | None:intergenic | 10.0% |
| !! | ATTAGAATGTTAATATATTA+AGG | - | chr7.3:1298826-1298845 | None:intergenic | 10.0% |
| !! | TATAACAAAAATAAACATTA+AGG | - | chr7.3:1299474-1299493 | None:intergenic | 10.0% |
| !!! | TCTTTGTATACATTTTATAT+TGG | + | chr7.3:1298901-1298920 | MS.gene050613:CDS | 15.0% |
| !!! | TTATTTTTGTTATATGAAAC+AGG | + | chr7.3:1299480-1299499 | MS.gene050613:intron | 15.0% |
| !! | ATAAGTTACTCTTACTTTAA+TGG | - | chr7.3:1299016-1299035 | None:intergenic | 20.0% |
| !! | GAATGTTAATATATTAAGGA+AGG | - | chr7.3:1298822-1298841 | None:intergenic | 20.0% |
| ! | AAATTTGTGAAACAACTTGT+GGG | - | chr7.3:1298987-1299006 | None:intergenic | 25.0% |
| ! | ATAACCTATGCTATTCTTAA+TGG | + | chr7.3:1299687-1299706 | MS.gene050613:CDS | 25.0% |
| ! | GTTAATATATTAAGGAAGGA+AGG | - | chr7.3:1298818-1298837 | None:intergenic | 25.0% |
| !! | AAAGATTTTCCAAGTATATC+TGG | - | chr7.3:1298886-1298905 | None:intergenic | 25.0% |
| AAGGAAGGAAGGAAAATAAA+AGG | - | chr7.3:1298807-1298826 | None:intergenic | 30.0% | |
| AGATCCATTAAGAATAGCAT+AGG | - | chr7.3:1299694-1299713 | None:intergenic | 30.0% | |
| AGTTTACTGTGGAAATACAA+AGG | + | chr7.3:1299566-1299585 | MS.gene050613:CDS | 30.0% | |
| GAAATTTGTGAAACAACTTG+TGG | - | chr7.3:1298988-1299007 | None:intergenic | 30.0% | |
| GAAGTTCTACTAAGAATGAA+GGG | - | chr7.3:1299209-1299228 | None:intergenic | 30.0% | |
| GGAAATACAAAGGAGATAAA+TGG | + | chr7.3:1299576-1299595 | MS.gene050613:CDS | 30.0% | |
| GTATTTCCACAGTAAACTTT+AGG | - | chr7.3:1299564-1299583 | None:intergenic | 30.0% | |
| TATGAAACAGGTCTTCAATA+TGG | + | chr7.3:1299492-1299511 | MS.gene050613:intron | 30.0% | |
| TTGTAGGAGCTATATAATCT+TGG | + | chr7.3:1299138-1299157 | MS.gene050613:intron | 30.0% | |
| TTTGATCCTAAAGTTTACTG+TGG | + | chr7.3:1299555-1299574 | MS.gene050613:CDS | 30.0% | |
| ! | TTTTGCTCACTGAAATTTGT+AGG | + | chr7.3:1299122-1299141 | MS.gene050613:intron | 30.0% |
| AGATCACAATGTTCCTGAAA+TGG | - | chr7.3:1299735-1299754 | None:intergenic | 35.0% | |
| AGGAGCTATATAATCTTGGT+GGG | + | chr7.3:1299142-1299161 | MS.gene050613:intron | 35.0% | |
| CAATGTTCCTGAAATGGAAA+AGG | - | chr7.3:1299729-1299748 | None:intergenic | 35.0% | |
| CATTGTGATCTTCAACCTAT+AGG | + | chr7.3:1299744-1299763 | MS.gene050613:CDS | 35.0% | |
| GGAAGTTCTACTAAGAATGA+AGG | - | chr7.3:1299210-1299229 | None:intergenic | 35.0% | |
| TACTTAATCTTGCACCAGTA+GGG | + | chr7.3:1299178-1299197 | MS.gene050613:CDS | 35.0% | |
| TAGGAGCTATATAATCTTGG+TGG | + | chr7.3:1299141-1299160 | MS.gene050613:intron | 35.0% | |
| TCAAGGTCTGAACTATTATG+AGG | - | chr7.3:1299231-1299250 | None:intergenic | 35.0% | |
| TTCTTACAACAATGCAGTAG+TGG | + | chr7.3:1299269-1299288 | MS.gene050613:CDS | 35.0% | |
| TTTCCAAGTATATCTGGTGA+TGG | - | chr7.3:1298880-1298899 | None:intergenic | 35.0% | |
| ! | ACAAAAGCATGTTGTGGATA+TGG | + | chr7.3:1299516-1299535 | MS.gene050613:CDS | 35.0% |
| ! | ATGGTTCGGAAAATTACGTA+TGG | + | chr7.3:1298762-1298781 | MS.gene050613:CDS | 35.0% |
| ! | GGTTGGAAGTGAAATCATTT+TGG | - | chr7.3:1298927-1298946 | None:intergenic | 35.0% |
| ! | TATGGTACAAAAGCATGTTG+TGG | + | chr7.3:1299510-1299529 | MS.gene050613:CDS | 35.0% |
| !! | TATATCTGGTGATGGAAGTT+TGG | - | chr7.3:1298872-1298891 | None:intergenic | 35.0% |
| AAAGCATGTTGTGGATATGG+TGG | + | chr7.3:1299519-1299538 | MS.gene050613:CDS | 40.0% | |
| ACCCTTACAACTATGTGAGT+TGG | + | chr7.3:1299628-1299647 | MS.gene050613:CDS | 40.0% | |
| AGTTCAGACCTTGACGAATT+TGG | + | chr7.3:1299237-1299256 | MS.gene050613:CDS | 40.0% | |
| CCCAACTCACATAGTTGTAA+GGG | - | chr7.3:1299632-1299651 | None:intergenic | 40.0% | |
| CCCTTACAACTATGTGAGTT+GGG | + | chr7.3:1299629-1299648 | MS.gene050613:CDS | 40.0% | |
| CTTCCATCACCAGATATACT+TGG | + | chr7.3:1298874-1298893 | MS.gene050613:CDS | 40.0% | |
| GAACTGAACACACACTATGT+TGG | - | chr7.3:1299067-1299086 | None:intergenic | 40.0% | |
| GTACTTAATCTTGCACCAGT+AGG | + | chr7.3:1299177-1299196 | MS.gene050613:CDS | 40.0% | |
| GTGTTTGAACCATGAGAAGT+AGG | - | chr7.3:1299405-1299424 | None:intergenic | 40.0% | |
| TCCCAACTCACATAGTTGTA+AGG | - | chr7.3:1299633-1299652 | None:intergenic | 40.0% | |
| TCTTGGTGGGAGAACATTTA+TGG | + | chr7.3:1299155-1299174 | MS.gene050613:CDS | 40.0% | |
| TGGTTCAAACACACATCTCT+TGG | + | chr7.3:1299413-1299432 | MS.gene050613:intron | 40.0% | |
| TGTGTGTTCAGTTCTTTCTG+TGG | + | chr7.3:1299073-1299092 | MS.gene050613:intron | 40.0% | |
| TGTTCCTGAAATGGAAAAGG+AGG | - | chr7.3:1299726-1299745 | None:intergenic | 40.0% | |
| ! | ACAACTATGTGAGTTGGGAT+GGG | + | chr7.3:1299634-1299653 | MS.gene050613:CDS | 40.0% |
| ! | TACAACTATGTGAGTTGGGA+TGG | + | chr7.3:1299633-1299652 | MS.gene050613:CDS | 40.0% |
| ! | TATAAGCTTGCTTGCAGCTT+CGG | - | chr7.3:1299670-1299689 | None:intergenic | 40.0% |
| ! | TGATCCTCCTTTTCCATTTC+AGG | + | chr7.3:1299719-1299738 | MS.gene050613:CDS | 40.0% |
| AACCATGAGAAGTAGGATGC+CGG | - | chr7.3:1299398-1299417 | None:intergenic | 45.0% | |
| AAGCTCCAACAGAACAGTGT+AGG | - | chr7.3:1299373-1299392 | None:intergenic | 45.0% | |
| ACTTCCAACCTAGCAGTCAT+TGG | + | chr7.3:1298937-1298956 | MS.gene050613:CDS | 45.0% | |
| AGCATCTGAGAGACTTTCTC+TGG | - | chr7.3:1299331-1299350 | None:intergenic | 45.0% | |
| CCATGCATCCAAATTCGTCA+AGG | - | chr7.3:1299248-1299267 | None:intergenic | 45.0% | |
| CCTTGACGAATTTGGATGCA+TGG | + | chr7.3:1299245-1299264 | MS.gene050613:CDS | 45.0% | |
| CGATACCTACACTGTTCTGT+TGG | + | chr7.3:1299365-1299384 | MS.gene050613:CDS | 45.0% | |
| ! | CTGTTCTGTTGGAGCTTTTC+CGG | + | chr7.3:1299376-1299395 | MS.gene050613:CDS | 45.0% |
| AACCTAGCAGTCATTGGCAC+AGG | + | chr7.3:1298943-1298962 | MS.gene050613:CDS | 50.0% | |
| AATGAAGGGTAGCACCCTAC+TGG | - | chr7.3:1299195-1299214 | None:intergenic | 50.0% | |
| GCATGTTGTGGATATGGTGG+AGG | + | chr7.3:1299522-1299541 | MS.gene050613:CDS | 50.0% | |
| TGTGCCAATGACTGCTAGGT+TGG | - | chr7.3:1298944-1298963 | None:intergenic | 50.0% | |
| TTCCGGCATCCTACTTCTCA+TGG | + | chr7.3:1299393-1299412 | MS.gene050613:CDS | 50.0% | |
| CACCTGTGCCAATGACTGCT+AGG | - | chr7.3:1298948-1298967 | None:intergenic | 55.0% | |
| CTAGCAGTCATTGGCACAGG+TGG | + | chr7.3:1298946-1298965 | MS.gene050613:CDS | 55.0% | |
| ! | AAGCTTGCTTGCAGCTTCGG+TGG | - | chr7.3:1299667-1299686 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 1298762 | 1299770 | 1298762 | ID=MS.gene050613 |
| chr7.3 | mRNA | 1298762 | 1299770 | 1298762 | ID=MS.gene050613.t1;Parent=MS.gene050613 |
| chr7.3 | exon | 1298762 | 1298783 | 1298762 | ID=MS.gene050613.t1.exon1;Parent=MS.gene050613.t1 |
| chr7.3 | CDS | 1298762 | 1298783 | 1298762 | ID=cds.MS.gene050613.t1;Parent=MS.gene050613.t1 |
| chr7.3 | exon | 1298866 | 1299020 | 1298866 | ID=MS.gene050613.t1.exon2;Parent=MS.gene050613.t1 |
| chr7.3 | CDS | 1298866 | 1299020 | 1298866 | ID=cds.MS.gene050613.t1;Parent=MS.gene050613.t1 |
| chr7.3 | exon | 1299144 | 1299414 | 1299144 | ID=MS.gene050613.t1.exon3;Parent=MS.gene050613.t1 |
| chr7.3 | CDS | 1299144 | 1299414 | 1299144 | ID=cds.MS.gene050613.t1;Parent=MS.gene050613.t1 |
| chr7.3 | exon | 1299502 | 1299770 | 1299502 | ID=MS.gene050613.t1.exon4;Parent=MS.gene050613.t1 |
| chr7.3 | CDS | 1299502 | 1299770 | 1299502 | ID=cds.MS.gene050613.t1;Parent=MS.gene050613.t1 |
| Gene Sequence |
| Protein sequence |
