AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene22825

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene22825.t1 MTR_7g116870 96.859 382 11 1 1 382 1 381 0.0 760
MS.gene22825.t1 MTR_8g028160 64.156 385 114 5 13 381 11 387 1.39e-180 507
MS.gene22825.t1 MTR_1g030220 41.444 374 207 5 10 376 16 384 4.57e-104 312
MS.gene22825.t1 MTR_1g030340 42.677 396 208 7 1 381 1 392 3.88e-101 305
MS.gene22825.t1 MTR_8g089805 42.779 367 203 4 9 369 15 380 1.86e-99 301
MS.gene22825.t1 MTR_7g033165 41.573 356 193 4 30 376 29 378 4.01e-98 297
MS.gene22825.t1 MTR_7g087190 40.945 381 210 8 9 376 13 391 7.62e-98 296
MS.gene22825.t1 MTR_1g030230 41.979 374 205 5 10 376 8 376 1.79e-97 295
MS.gene22825.t1 MTR_1g030268 42.328 378 199 9 7 376 16 382 1.23e-96 293
MS.gene22825.t1 MTR_1g030275 42.246 374 202 6 10 376 15 381 5.12e-96 291
MS.gene22825.t1 MTR_7g033150 39.323 384 205 7 15 378 11 386 3.42e-95 290
MS.gene22825.t1 MTR_7g033155 39.840 374 193 5 30 378 34 400 2.50e-93 285
MS.gene22825.t1 MTR_7g113860 39.071 366 200 7 16 370 15 368 3.87e-83 258
MS.gene22825.t1 MTR_7g113860 37.302 378 225 6 1 370 1 374 6.14e-82 255
MS.gene22825.t1 MTR_6g007090 36.224 392 220 6 1 376 1 378 1.33e-80 252
MS.gene22825.t1 MTR_1g082390 38.211 369 212 6 5 367 8 366 1.26e-78 246
MS.gene22825.t1 MTR_8g038680 37.143 385 214 10 7 376 1 372 4.56e-77 243
MS.gene22825.t1 MTR_6g007095 36.579 380 210 5 10 371 9 375 2.00e-75 247
MS.gene22825.t1 MTR_6g007095 33.815 346 191 6 42 376 378 696 1.19e-57 199
MS.gene22825.t1 MTR_6g007100 36.461 373 211 6 10 376 9 361 3.13e-74 235
MS.gene22825.t1 MTR_1g030265 41.060 302 166 5 82 376 53 349 3.88e-74 234
MS.gene22825.t1 MTR_7g111780 40.782 358 180 12 29 376 29 364 4.77e-74 234
MS.gene22825.t1 MTR_7g033165 41.606 274 149 3 30 294 29 300 1.66e-72 229
MS.gene22825.t1 MTR_8g089805 40.273 293 168 4 83 369 21 312 2.79e-70 223
MS.gene22825.t1 MTR_1g030268 42.230 296 155 7 7 294 16 303 4.10e-70 223
MS.gene22825.t1 MTR_2g015590 35.389 373 211 12 14 372 13 369 5.40e-63 206
MS.gene22825.t1 MTR_7g113860 36.364 297 179 4 80 370 8 300 2.52e-61 200
MS.gene22825.t1 MTR_2g015580 36.096 374 204 13 14 370 27 382 3.05e-59 197
MS.gene22825.t1 MTR_8g012540 34.286 350 202 10 7 341 1 337 6.79e-58 192
MS.gene22825.t1 MTR_2g015630 35.920 348 188 13 39 368 36 366 2.06e-56 189
MS.gene22825.t1 MTR_2g015650 36.901 355 189 12 32 369 29 365 4.93e-56 188
MS.gene22825.t1 MTR_3g463960 34.091 352 202 10 32 368 42 378 6.99e-53 180
MS.gene22825.t1 MTR_3g463950 34.091 352 202 10 32 368 42 378 6.99e-53 180
MS.gene22825.t1 MTR_3g463970 34.091 352 202 10 32 368 42 378 6.99e-53 180
MS.gene22825.t1 MTR_3g463940 34.091 352 202 10 32 368 42 378 6.99e-53 180
MS.gene22825.t1 MTR_2g043980 32.898 383 212 11 1 369 1 352 2.35e-52 178
MS.gene22825.t1 MTR_3g463930 34.540 359 198 12 32 368 42 385 4.65e-52 178
MS.gene22825.t1 MTR_3g069780 34.239 368 206 13 24 373 20 369 1.47e-51 176
MS.gene22825.t1 MTR_7g111780 38.028 284 150 8 98 376 3 265 3.96e-51 172
MS.gene22825.t1 MTR_3g438030 33.967 368 207 13 24 373 20 369 5.73e-51 175
MS.gene22825.t1 MTR_3g448360 33.687 377 214 13 10 368 3 361 7.30e-51 174
MS.gene22825.t1 MTR_0029s0050 33.894 357 197 10 24 368 20 349 7.73e-51 174
MS.gene22825.t1 MTR_2g079090 33.894 357 197 10 24 368 20 349 7.98e-51 174
MS.gene22825.t1 MTR_2g079080 33.894 357 197 10 24 368 20 349 1.04e-50 174
MS.gene22825.t1 MTR_2g015670 35.057 348 193 11 32 370 29 352 2.75e-50 172
MS.gene22825.t1 MTR_0029s0100 33.894 357 197 10 24 368 20 349 2.92e-50 172
MS.gene22825.t1 MTR_3g069520 34.358 358 201 13 32 373 28 367 8.30e-50 172
MS.gene22825.t1 MTR_4g104240 31.073 354 212 11 32 372 37 371 9.33e-47 164
MS.gene22825.t1 MTR_8g031420 30.053 376 224 11 3 366 2 350 2.71e-42 152
MS.gene22825.t1 MTR_8g022810 31.720 372 202 15 4 354 9 349 3.02e-41 149
MS.gene22825.t1 MTR_2g015590 32.313 294 179 9 14 294 13 299 1.56e-38 141
MS.gene22825.t1 MTR_2g044100 30.484 351 209 11 28 366 37 364 4.92e-38 141
MS.gene22825.t1 MTR_8g031390 29.395 347 199 11 34 366 37 351 1.26e-37 139
MS.gene22825.t1 MTR_8g031430 30.636 346 193 13 34 364 37 350 1.29e-37 139
MS.gene22825.t1 MTR_8g031400 28.824 340 211 9 34 366 37 352 1.24e-36 137
MS.gene22825.t1 MTR_5g009100 26.705 352 217 9 36 373 48 372 1.36e-36 137
MS.gene22825.t1 MTR_8g022790 32.000 350 183 11 34 366 37 348 3.09e-36 135
MS.gene22825.t1 MTR_8g079050 28.042 378 223 14 8 363 10 360 9.64e-36 134
MS.gene22825.t1 MTR_5g074270 30.978 368 195 17 32 376 31 362 1.12e-34 131
MS.gene22825.t1 MTR_1g060490 28.923 325 194 10 33 351 36 329 1.01e-32 125
MS.gene22825.t1 MTR_2g033920 27.429 350 212 9 33 367 34 356 2.44e-32 125
MS.gene22825.t1 MTR_2g043990 31.803 305 166 10 1 293 63 337 9.79e-31 120
MS.gene22825.t1 MTR_3g098270 27.763 371 226 10 9 363 9 353 1.51e-30 120
MS.gene22825.t1 MTR_3g024510 27.143 350 215 10 36 372 40 362 1.70e-30 120
MS.gene22825.t1 MTR_2g033930 27.056 377 233 13 7 367 1 351 1.75e-30 120
MS.gene22825.t1 MTR_4g122200 26.455 378 233 10 5 367 9 356 6.97e-30 118
MS.gene22825.t1 MTR_8g031390 28.852 305 175 10 34 324 37 313 9.83e-30 117
MS.gene22825.t1 MTR_3g005650 25.995 377 230 11 13 375 11 352 3.64e-29 116
MS.gene22825.t1 MTR_2g084585 27.151 372 232 11 1 361 1 344 7.28e-29 115
MS.gene22825.t1 MTR_3g052580 26.211 351 217 11 34 368 27 351 1.37e-28 115
MS.gene22825.t1 MTR_3g052580 26.225 347 222 10 34 368 28 352 1.38e-28 115
MS.gene22825.t1 MTR_0565s0010 25.707 389 224 13 7 371 9 356 4.03e-28 113
MS.gene22825.t1 MTR_4g035353 26.882 372 229 13 11 367 8 351 4.07e-28 113
MS.gene22825.t1 MTR_7g116520 26.882 372 226 12 7 364 12 351 4.08e-28 114
MS.gene22825.t1 MTR_5g022630 28.367 349 209 12 34 367 43 365 5.18e-28 113
MS.gene22825.t1 MTR_3g082830 29.254 335 200 15 34 356 38 347 5.72e-28 113
MS.gene22825.t1 MTR_8g022810 33.613 238 129 9 4 225 9 233 8.63e-28 112
MS.gene22825.t1 MTR_1g060500 26.647 334 200 10 33 352 39 341 2.01e-27 111
MS.gene22825.t1 MTR_8g014910 26.975 367 231 12 1 356 2 342 2.46e-27 111
MS.gene22825.t1 MTR_8g087890 25.789 380 235 13 9 372 7 355 2.66e-27 111
MS.gene22825.t1 MTR_2g100620 26.844 339 214 10 34 361 31 346 3.71e-27 110
MS.gene22825.t1 MTR_3g052480 24.932 369 227 13 16 363 13 352 5.32e-27 110
MS.gene22825.t1 MTR_4g056280 26.647 334 210 9 34 356 30 339 1.15e-26 109
MS.gene22825.t1 MTR_5g087690 25.620 363 216 12 25 371 40 364 1.31e-26 109
MS.gene22825.t1 MTR_1g025760 26.893 383 224 14 2 361 45 394 1.57e-26 109
MS.gene22825.t1 MTR_1g025680 27.297 381 232 14 4 367 2 354 1.62e-26 110
MS.gene22825.t1 MTR_1g069175 28.010 382 222 13 5 364 2 352 2.41e-26 108
MS.gene22825.t1 MTR_1g024890 26.849 365 226 11 14 364 12 349 3.87e-26 108
MS.gene22825.t1 MTR_2g461580 24.935 385 234 11 9 377 6 351 4.16e-26 107
MS.gene22825.t1 MTR_3g464730 25.203 369 228 11 7 357 1 339 4.60e-26 107
MS.gene22825.t1 MTR_3g052490 24.865 370 237 10 16 368 12 357 4.92e-26 107
MS.gene22825.t1 MTR_5g093090 26.629 353 214 11 34 368 28 353 5.34e-26 107
MS.gene22825.t1 MTR_5g084790 26.549 339 204 13 34 356 32 341 6.13e-26 107
MS.gene22825.t1 MTR_7g116570 26.420 352 216 12 33 368 33 357 6.73e-26 107
MS.gene22825.t1 MTR_0009s0250 29.032 310 186 10 8 303 4 293 1.12e-25 106
MS.gene22825.t1 MTR_3g435540 28.080 349 209 13 28 361 16 337 1.42e-25 106
MS.gene22825.t1 MTR_1g025720 27.326 344 200 13 32 357 35 346 1.67e-25 106
MS.gene22825.t1 MTR_4g087985 27.056 377 224 14 13 363 15 366 5.76e-25 104
MS.gene22825.t1 MTR_7g104220 26.994 326 198 12 35 352 43 336 7.89e-25 104
MS.gene22825.t1 MTR_8g075230 27.089 347 214 12 34 367 36 356 1.00e-24 103
MS.gene22825.t1 MTR_4g056160 27.976 336 202 11 34 354 27 337 1.30e-24 103
MS.gene22825.t1 MTR_1g079540 25.606 371 233 13 14 368 11 354 1.67e-24 103
MS.gene22825.t1 MTR_4g019880 27.532 385 224 18 1 364 1 351 1.77e-24 103
MS.gene22825.t1 MTR_1g092740 24.776 335 213 9 23 350 27 329 2.10e-24 103
MS.gene22825.t1 MTR_1g082410 27.128 376 162 12 22 371 16 305 3.22e-24 101
MS.gene22825.t1 MTR_7g116510 25.490 357 215 13 29 364 17 343 5.25e-24 102
MS.gene22825.t1 MTR_2g015080 25.594 379 219 16 4 352 7 352 1.50e-23 100
MS.gene22825.t1 MTR_1g025700 26.100 341 212 11 34 361 50 363 1.52e-23 100
MS.gene22825.t1 MTR_1g025780 27.405 343 204 13 34 361 41 353 1.62e-23 100
MS.gene22825.t1 MTR_5g084770 25.074 339 212 12 34 357 28 339 2.39e-23 100
MS.gene22825.t1 MTR_5g083040 27.108 332 204 13 34 350 32 340 2.56e-23 100
MS.gene22825.t1 MTR_8g075220 26.012 346 218 11 32 362 38 360 3.04e-23 100
MS.gene22825.t1 MTR_5g084750 24.471 331 209 12 34 350 30 333 3.31e-23 99.8
MS.gene22825.t1 MTR_5g022640 26.816 358 202 15 34 367 43 364 3.37e-23 99.8
MS.gene22825.t1 MTR_7g116500 26.648 349 209 12 33 364 32 350 3.57e-23 99.8
MS.gene22825.t1 MTR_1g092750 24.217 351 199 11 35 364 41 345 5.95e-23 99.0
MS.gene22825.t1 MTR_1g092760 25.806 341 205 14 35 364 40 343 6.59e-23 99.0
MS.gene22825.t1 MTR_8g087870 26.273 373 210 12 1 355 1 326 7.29e-23 98.6
MS.gene22825.t1 MTR_3g114090 29.032 341 198 13 32 356 34 346 7.96e-23 98.6
MS.gene22825.t1 MTR_4g108690 25.723 346 217 11 30 361 22 341 1.00e-22 98.6
MS.gene22825.t1 MTR_3g005660 25.138 362 235 9 26 374 28 366 1.68e-22 97.8
MS.gene22825.t1 MTR_5g078210 26.205 332 204 12 38 356 29 332 2.71e-22 97.1
MS.gene22825.t1 MTR_3g114120 28.242 347 197 13 34 361 47 360 4.69e-22 96.7
MS.gene22825.t1 MTR_2g033920 27.798 277 170 7 33 294 34 295 4.97e-22 95.9
MS.gene22825.t1 MTR_1g025910 28.446 341 196 14 34 361 43 348 1.49e-21 95.5
MS.gene22825.t1 MTR_3g023220 24.551 334 200 10 35 355 34 328 1.99e-21 94.7
MS.gene22825.t1 MTR_6g021530 24.425 348 219 10 38 368 33 353 2.96e-21 94.4
MS.gene22825.t1 MTR_7g008060 25.789 380 219 14 2 364 4 337 3.64e-21 94.0
MS.gene22825.t1 MTR_3g021460 24.737 380 227 12 9 372 6 342 1.58e-20 92.0
MS.gene22825.t1 MTR_1g079530 26.053 380 225 18 12 372 5 347 1.85e-20 92.0
MS.gene22825.t1 MTR_8g074570 25.654 382 235 15 2 363 4 356 3.15e-19 88.6
MS.gene22825.t1 MTR_2g017965 25.672 335 206 10 35 357 34 337 4.76e-19 88.2
MS.gene22825.t1 MTR_2g017925 27.893 337 195 15 35 360 34 333 5.11e-19 87.8
MS.gene22825.t1 MTR_8g075200 24.490 343 220 11 32 361 39 355 7.14e-19 87.8
MS.gene22825.t1 MTR_2g017955 24.619 394 239 13 9 381 13 369 1.28e-18 87.0
MS.gene22825.t1 MTR_1g060520 22.892 332 179 10 33 352 39 305 1.64e-18 85.9
MS.gene22825.t1 MTR_1g092690 23.148 324 207 12 35 350 52 341 2.11e-18 86.3
MS.gene22825.t1 MTR_5g093090 26.715 277 179 8 34 297 28 293 6.26e-18 84.0
MS.gene22825.t1 MTR_5g074210 31.429 175 99 6 203 376 64 218 8.79e-18 82.0
MS.gene22825.t1 MTR_8g074560 25.781 384 217 16 12 363 5 352 9.32e-17 81.3
MS.gene22825.t1 MTR_1g030262 60.345 58 23 0 28 85 30 87 1.47e-16 75.1
MS.gene22825.t1 MTR_5g078210 26.667 270 171 9 38 294 29 284 2.20e-16 79.7
MS.gene22825.t1 MTR_0127s0040 23.482 247 161 5 136 374 8 234 3.18e-16 77.8
MS.gene22825.t1 MTR_2g017875 30.049 203 125 8 35 225 35 232 6.08e-16 79.0
MS.gene22825.t1 MTR_1108s0010 24.889 225 139 5 135 356 1 198 1.36e-15 75.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene22825.t1 AT4G01130 62.895 380 137 2 1 376 1 380 4.02e-177 498
MS.gene22825.t1 AT4G01130 63.423 298 105 2 1 294 1 298 1.07e-135 391
MS.gene22825.t1 AT4G01130 62.925 294 105 1 87 376 1 294 3.62e-134 385
MS.gene22825.t1 AT3G26430 42.287 376 209 5 8 376 4 378 9.58e-100 301
MS.gene22825.t1 AT5G14450 40.000 380 209 7 13 379 16 389 4.06e-96 292
MS.gene22825.t1 AT1G67830 42.941 340 187 4 30 363 26 364 1.66e-93 285
MS.gene22825.t1 AT1G54790 38.032 376 217 6 6 373 7 374 1.07e-81 255
MS.gene22825.t1 AT1G54790 36.870 377 224 6 7 373 1 373 9.48e-76 239
MS.gene22825.t1 AT3G27950 36.554 383 214 8 9 378 6 372 2.51e-75 238
MS.gene22825.t1 AT1G56670 36.292 383 216 9 3 376 8 371 4.14e-75 238
MS.gene22825.t1 AT1G09390 35.620 379 218 8 6 376 8 368 9.33e-73 231
MS.gene22825.t1 AT1G54790 35.236 403 221 9 7 373 1 399 2.27e-70 226
MS.gene22825.t1 AT3G05180 36.337 344 208 5 31 367 33 372 2.67e-69 223
MS.gene22825.t1 AT3G62280 35.191 341 194 6 35 368 37 357 3.52e-60 199
MS.gene22825.t1 AT1G28580 33.938 386 211 13 7 370 10 373 1.72e-59 197
MS.gene22825.t1 AT5G45910 33.770 382 222 9 7 370 3 371 1.84e-59 197
MS.gene22825.t1 AT1G31550 35.938 384 199 14 11 372 15 373 2.62e-59 197
MS.gene22825.t1 AT1G28600 34.694 392 208 14 1 370 1 366 1.46e-58 195
MS.gene22825.t1 AT1G31550 35.770 383 198 14 11 372 15 370 1.54e-57 192
MS.gene22825.t1 AT2G27360 36.387 382 206 11 8 370 7 370 2.33e-57 192
MS.gene22825.t1 AT1G28590 34.430 395 212 13 1 372 4 374 3.17e-57 192
MS.gene22825.t1 AT1G28640 33.505 388 221 13 5 372 3 373 1.60e-56 190
MS.gene22825.t1 AT1G28650 33.842 393 221 13 1 372 1 375 1.64e-56 190
MS.gene22825.t1 AT1G28610 33.071 381 222 11 6 370 3 366 4.71e-54 183
MS.gene22825.t1 AT1G28670 33.333 387 224 13 5 372 3 374 4.36e-53 181
MS.gene22825.t1 AT1G28570 33.766 385 214 15 7 370 6 370 8.24e-53 180
MS.gene22825.t1 AT1G56670 36.213 301 172 8 3 294 8 297 1.07e-50 172
MS.gene22825.t1 AT1G28660 32.648 389 223 14 5 372 3 373 4.17e-50 173
MS.gene22825.t1 AT1G28660 32.648 389 222 15 5 372 3 372 1.07e-48 169
MS.gene22825.t1 AT3G48460 31.111 360 202 13 32 370 36 370 3.82e-45 160
MS.gene22825.t1 AT3G62280 35.135 259 149 5 35 286 37 283 2.27e-42 150
MS.gene22825.t1 AT1G28580 31.818 308 180 11 77 372 5 294 1.22e-40 146
MS.gene22825.t1 AT3G14225 30.612 343 207 9 34 363 37 361 2.91e-36 136
MS.gene22825.t1 AT5G40990 29.885 348 199 10 34 363 37 357 9.15e-36 134
MS.gene22825.t1 AT3G14225 30.058 346 201 10 34 363 37 357 4.77e-35 132
MS.gene22825.t1 AT1G06990 29.429 350 195 12 32 361 35 352 1.51e-34 131
MS.gene22825.t1 AT1G53920 27.390 387 232 11 1 365 7 366 1.56e-34 131
MS.gene22825.t1 AT5G15720 29.839 372 206 13 22 368 14 355 7.03e-33 126
MS.gene22825.t1 AT5G22810 29.118 340 207 11 34 361 34 351 9.37e-33 126
MS.gene22825.t1 AT4G10950 26.000 350 222 11 34 371 71 395 3.57e-32 125
MS.gene22825.t1 AT2G23540 28.684 380 219 14 10 363 18 371 7.98e-32 124
MS.gene22825.t1 AT1G71691 27.147 361 219 9 19 366 41 370 4.45e-31 122
MS.gene22825.t1 AT2G31540 28.158 380 215 13 1 356 1 346 9.21e-31 120
MS.gene22825.t1 AT3G50400 28.108 370 216 14 25 372 25 366 2.58e-30 120
MS.gene22825.t1 AT1G58430 28.824 340 201 12 32 356 33 346 4.37e-30 119
MS.gene22825.t1 AT2G42990 26.796 362 215 14 13 357 10 338 1.53e-29 117
MS.gene22825.t1 AT1G53940 28.280 343 211 11 34 363 39 359 3.09e-29 117
MS.gene22825.t1 AT4G10950 25.714 350 219 12 34 371 71 391 3.21e-29 117
MS.gene22825.t1 AT1G28570 33.178 214 113 7 166 372 19 209 4.16e-29 113
MS.gene22825.t1 AT5G41890 28.022 364 219 12 21 363 18 359 6.58e-29 116
MS.gene22825.t1 AT5G03610 28.116 345 200 12 35 366 44 353 1.07e-28 115
MS.gene22825.t1 AT5G08460 26.823 384 240 14 1 367 14 373 1.35e-28 115
MS.gene22825.t1 AT1G71120 26.934 349 201 12 34 364 31 343 2.00e-28 114
MS.gene22825.t1 AT2G30310 28.075 374 222 14 1 356 1 345 3.15e-28 114
MS.gene22825.t1 AT1G28570 33.178 214 113 7 166 372 110 300 3.35e-28 112
MS.gene22825.t1 AT1G53990 27.988 343 205 11 34 363 35 348 3.46e-28 114
MS.gene22825.t1 AT4G26790 26.100 341 217 11 32 361 27 343 5.11e-28 113
MS.gene22825.t1 AT4G26790 26.100 341 217 11 32 361 27 343 5.11e-28 113
MS.gene22825.t1 AT2G24560 27.248 367 224 11 1 351 1 340 5.26e-28 113
MS.gene22825.t1 AT1G29670 27.221 349 213 12 36 371 34 354 7.25e-28 112
MS.gene22825.t1 AT1G29670 27.143 350 214 12 36 372 102 423 2.37e-27 112
MS.gene22825.t1 AT2G04570 27.457 346 210 15 34 365 28 346 2.76e-27 111
MS.gene22825.t1 AT1G54030 29.254 335 175 14 33 353 51 337 3.91e-27 111
MS.gene22825.t1 AT2G30220 28.177 362 216 14 11 356 11 344 7.26e-26 107
MS.gene22825.t1 AT5G03980 25.745 369 200 14 1 357 1 307 8.56e-26 106
MS.gene22825.t1 AT3G14820 28.531 354 184 15 34 361 32 342 4.91e-25 104
MS.gene22825.t1 AT5G45950 26.923 338 200 13 34 357 40 344 8.75e-25 104
MS.gene22825.t1 AT5G15720 28.105 306 173 9 81 368 48 324 9.26e-25 103
MS.gene22825.t1 AT5G03820 28.042 378 211 18 11 361 6 349 1.53e-24 103
MS.gene22825.t1 AT4G28780 28.249 354 207 14 33 368 30 354 1.69e-24 103
MS.gene22825.t1 AT1G59406 25.936 374 227 14 6 362 2 342 1.79e-24 103
MS.gene22825.t1 AT1G59030 25.936 374 227 14 6 362 2 342 1.79e-24 103
MS.gene22825.t1 AT1G58725 25.936 374 227 14 6 362 2 342 1.79e-24 103
MS.gene22825.t1 AT1G71691 28.621 290 180 8 19 299 41 312 1.81e-24 102
MS.gene22825.t1 AT2G03980 28.198 344 206 14 29 360 38 352 2.50e-24 103
MS.gene22825.t1 AT2G03980 28.198 344 206 14 29 360 38 352 2.50e-24 103
MS.gene22825.t1 AT2G03980 28.198 344 206 14 29 360 38 352 2.50e-24 103
MS.gene22825.t1 AT2G03980 28.198 344 206 14 29 360 38 352 2.50e-24 103
MS.gene22825.t1 AT3G16370 26.513 347 215 13 34 366 30 350 3.01e-24 102
MS.gene22825.t1 AT1G75880 25.132 378 238 12 4 362 17 368 4.04e-24 102
MS.gene22825.t1 AT5G03820 28.042 378 211 18 11 361 34 377 7.42e-24 102
MS.gene22825.t1 AT1G54020 27.171 357 213 11 15 361 12 331 7.51e-24 102
MS.gene22825.t1 AT3G04290 26.934 349 208 12 33 364 28 346 8.40e-24 101
MS.gene22825.t1 AT1G75900 27.273 341 210 11 34 362 43 357 9.96e-24 101
MS.gene22825.t1 AT5G03600 27.105 380 218 16 3 367 17 352 1.52e-23 100
MS.gene22825.t1 AT1G71250 26.377 345 219 11 34 367 41 361 1.84e-23 100
MS.gene22825.t1 AT5G63170 26.703 367 202 12 7 352 1 321 1.92e-23 100
MS.gene22825.t1 AT1G75880 25.587 383 229 13 4 362 17 367 2.12e-23 100
MS.gene22825.t1 AT5G45670 26.866 335 204 14 36 356 31 338 2.21e-23 100
MS.gene22825.t1 AT1G75890 28.075 374 214 15 13 365 22 361 2.54e-23 100
MS.gene22825.t1 AT3G53100 24.798 371 232 13 7 361 4 343 2.63e-23 100
MS.gene22825.t1 AT5G15720 29.252 294 172 10 22 294 14 292 2.96e-23 99.4
MS.gene22825.t1 AT1G75890 27.688 372 218 14 13 365 51 390 3.59e-23 100
MS.gene22825.t1 AT5G45960 26.957 345 199 13 28 350 41 354 3.93e-23 99.8
MS.gene22825.t1 AT1G53940 28.421 285 172 10 34 305 39 304 4.41e-23 98.6
MS.gene22825.t1 AT5G33370 26.301 346 214 13 33 364 29 347 5.17e-23 99.4
MS.gene22825.t1 AT1G29660 24.928 349 222 10 36 371 34 355 5.67e-23 99.4
MS.gene22825.t1 AT4G18970 24.438 356 232 12 36 378 30 361 6.33e-23 99.0
MS.gene22825.t1 AT4G18970 24.438 356 232 12 36 378 30 361 6.35e-23 99.8
MS.gene22825.t1 AT1G75890 27.559 381 220 14 13 365 22 374 6.63e-23 99.4
MS.gene22825.t1 AT2G24560 27.964 329 207 10 1 313 1 315 1.19e-22 97.4
MS.gene22825.t1 AT3G09930 26.686 341 203 14 35 362 40 346 2.88e-22 97.1
MS.gene22825.t1 AT3G09930 26.686 341 203 14 35 362 40 346 2.88e-22 97.1
MS.gene22825.t1 AT1G71691 24.916 297 183 7 80 366 3 269 4.90e-22 95.1
MS.gene22825.t1 AT1G75920 27.224 371 205 15 15 361 6 335 5.46e-22 96.3
MS.gene22825.t1 AT2G19060 26.966 356 207 14 28 368 24 341 9.04e-22 95.5
MS.gene22825.t1 AT5G03810 25.882 340 209 12 34 361 37 345 1.12e-21 95.5
MS.gene22825.t1 AT2G40250 23.894 339 217 13 34 356 36 349 1.21e-21 95.5
MS.gene22825.t1 AT5G18430 26.190 378 224 15 10 368 12 353 1.40e-21 95.5
MS.gene22825.t1 AT1G75930 26.757 370 218 13 13 363 6 341 1.94e-21 94.7
MS.gene22825.t1 AT5G03600 27.089 347 195 15 35 367 15 317 2.35e-21 94.0
MS.gene22825.t1 AT1G20135 23.118 372 219 11 4 356 3 326 5.34e-21 93.2
MS.gene22825.t1 AT5G42170 25.872 344 212 13 35 365 51 364 8.88e-21 93.2
MS.gene22825.t1 AT1G20120 25.588 340 212 12 32 357 76 388 9.67e-21 93.2
MS.gene22825.t1 AT1G54030 34.783 207 96 10 33 226 51 231 1.66e-20 91.7
MS.gene22825.t1 AT1G54000 25.907 386 213 19 1 361 2 339 1.67e-20 92.4
MS.gene22825.t1 AT1G28600 32.420 219 116 9 1 202 1 204 2.42e-20 89.0
MS.gene22825.t1 AT1G74460 26.016 369 218 16 11 361 6 337 2.48e-20 91.7
MS.gene22825.t1 AT5G37690 25.680 331 207 11 38 356 31 334 2.60e-20 91.7
MS.gene22825.t1 AT1G33811 23.737 396 252 14 7 378 1 370 2.84e-20 91.7
MS.gene22825.t1 AT1G54010 25.464 377 226 14 1 361 2 339 5.21e-20 91.3
MS.gene22825.t1 AT1G28610 31.250 208 126 6 6 202 3 204 6.89e-20 88.6
MS.gene22825.t1 AT1G75920 26.911 327 181 13 52 361 22 307 2.04e-19 88.6
MS.gene22825.t1 AT1G20130 24.501 351 215 13 34 362 204 526 7.34e-19 88.6
MS.gene22825.t1 AT1G20130 24.501 351 215 13 34 362 184 506 7.72e-19 88.6
MS.gene22825.t1 AT1G75920 26.166 386 205 16 15 361 1 345 2.51e-18 85.9
MS.gene22825.t1 AT2G19010 25.356 351 201 13 36 368 32 339 4.83e-18 84.7
MS.gene22825.t1 AT3G43570 23.450 371 211 13 6 362 2 313 5.61e-18 84.3
MS.gene22825.t1 AT1G58520 25.490 357 209 15 23 362 19 335 7.75e-18 84.3
MS.gene22825.t1 AT1G58525 25.490 357 209 15 23 362 19 335 7.75e-18 84.3
MS.gene22825.t1 AT2G19010 25.071 351 202 12 36 368 62 369 7.77e-18 84.7
MS.gene22825.t1 AT3G14220 25.369 339 209 10 35 363 33 337 8.47e-18 84.3
MS.gene22825.t1 AT2G31550 26.214 206 124 5 159 356 20 205 1.18e-17 81.6
MS.gene22825.t1 AT2G36325 24.128 344 210 12 35 364 48 354 1.81e-17 83.2
MS.gene22825.t1 AT3G14210 26.437 348 206 13 27 360 29 340 2.55e-17 83.2
MS.gene22825.t1 AT1G20132 24.927 341 209 13 34 357 61 371 9.81e-17 81.3
MS.gene22825.t1 AT3G43550 26.471 306 187 12 6 294 2 286 1.06e-16 80.1
MS.gene22825.t1 AT1G75910 25.434 346 206 14 32 361 26 335 1.95e-16 80.1
MS.gene22825.t1 AT5G37690 24.848 330 203 12 38 356 31 326 6.68e-16 78.6
MS.gene22825.t1 AT5G55050 26.519 362 220 16 27 368 32 367 2.54e-15 77.0
MS.gene22825.t1 AT5G33370 25.352 284 184 11 33 302 29 298 2.93e-15 76.6

Find 89 sgRNAs with CRISPR-Local

Find 149 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATAACCTATGCTATTCTTAA+TGG 0.135679 7.4:+1431965 MS.gene22825:CDS
AGTTCAGACATTGACGAATT+TGG 0.191181 7.4:+1431515 MS.gene22825:CDS
CCTGCTGAATCTGGTCCTTA+TGG 0.213684 7.4:+1429877 MS.gene22825:CDS
TCTTGGTGGGAGAACATTTA+TGG 0.217034 7.4:+1431433 MS.gene22825:CDS
ATAAGTTACTCTTACTTTAA+TGG 0.231194 7.4:-1431291 None:intergenic
GTATTTCCACAGTAAACTTT+AGG 0.285895 7.4:-1431839 None:intergenic
CATGCTTGTGTTGCCTTGTT+TGG 0.295105 7.4:+1429762 MS.gene22825:CDS
GGTTGGAAGTGAAATCATTT+TGG 0.297243 7.4:-1431202 None:intergenic
CTGATCAGCTTCTTTAACTT+TGG 0.306393 7.4:-1430961 None:intergenic
AATACTTCTTTGTTTGTCAC+TGG 0.313550 7.4:+1430885 MS.gene22825:CDS
GGAAATACAAAGGAGATAAA+TGG 0.320143 7.4:+1431854 MS.gene22825:CDS
ATTCTGTCAGCTCAAGCTAT+TGG 0.321669 7.4:+1430768 MS.gene22825:intron
GGAGATTCAAATTCAGATAC+TGG 0.325361 7.4:+1429835 MS.gene22825:CDS
GTGACAAACAAAGAAGTATT+AGG 0.332102 7.4:-1430882 None:intergenic
GATCCTATTGATTGTAGATA+TGG 0.334553 7.4:-1430807 None:intergenic
CATTGTGATCTTCAACCTAT+AGG 0.348100 7.4:+1432022 MS.gene22825:CDS
CTTCAAATGGATCAACCTAT+AGG 0.355948 7.4:-1432037 None:intergenic
TATATCTGGTGATGGAAGTT+TGG 0.358262 7.4:-1431147 None:intergenic
TATAAGCTTGCTTGCAGCTT+CGG 0.371154 7.4:-1431945 None:intergenic
TGGTTGCAAATTGTTTCATT+TGG 0.386261 7.4:-1430941 None:intergenic
ACAAAAGCATGTTGTGGATA+TGG 0.389909 7.4:+1431794 MS.gene22825:CDS
AATGAACAATAATATATTCA+TGG 0.395938 7.4:-1429737 None:intergenic
AGATCACAATGTTCCTGAAA+TGG 0.396329 7.4:-1432010 None:intergenic
TATGAAACAGGTCTTCAATA+TGG 0.402022 7.4:+1431770 MS.gene22825:intron
TTCCGGCATCCTACTTCTCA+TGG 0.414441 7.4:+1431671 MS.gene22825:CDS
CTTGTGTTGCCTTGTTTGGT+TGG 0.426360 7.4:+1429766 MS.gene22825:CDS
AGTCCATATCTACAATCAAT+AGG 0.429091 7.4:+1430804 MS.gene22825:CDS
ACTTCCAACCTAGCAGTCAT+TGG 0.432851 7.4:+1431215 MS.gene22825:CDS
TTGAAGTAAGTCATTCCATA+AGG 0.437386 7.4:-1429892 None:intergenic
TCCCAACTCACATAGTTGTA+AGG 0.444412 7.4:-1431908 None:intergenic
CTTCCATCACCAGATATACT+TGG 0.446578 7.4:+1431152 MS.gene22825:CDS
AGCAACTGAGAGACTTTCTC+TGG 0.453113 7.4:-1431606 None:intergenic
AGCTGAATAGCAAGGGAGAA+AGG 0.454745 7.4:-1430915 None:intergenic
ATACTTCTTTGTTTGTCACT+GGG 0.469378 7.4:+1430886 MS.gene22825:CDS
CCAGCTGGTCGTGCTTCTGA+TGG 0.476933 7.4:+1429919 MS.gene22825:CDS
TTGTAGGAGCTATATAATCT+TGG 0.478024 7.4:+1431416 MS.gene22825:intron
CATTGACGAATTTGGATGCA+TGG 0.485707 7.4:+1431523 MS.gene22825:CDS
TACAACTATGTGAGTTGGGA+TGG 0.486217 7.4:+1431911 MS.gene22825:CDS
CCCTTACAACTATGTGAGTT+GGG 0.488599 7.4:+1431907 MS.gene22825:CDS
TGTTTGGTTGGTTTGAGTCA+AGG 0.490554 7.4:+1429778 MS.gene22825:CDS
GGAAGTTCTACTAAGAATGA+AGG 0.495691 7.4:-1431485 None:intergenic
CAATGTTCCTGAAATGGAAA+AGG 0.495858 7.4:-1432004 None:intergenic
GGATGCCAATGTAGCATAGT+TGG 0.496579 7.4:-1430847 None:intergenic
TGTGCCAATGACTGCTAGGT+TGG 0.505293 7.4:-1431219 None:intergenic
ACCCTTACAACTATGTGAGT+TGG 0.506490 7.4:+1431906 MS.gene22825:CDS
TCAATGTCTGAACTATTATG+AGG 0.508377 7.4:-1431506 None:intergenic
TAGGAGCTATATAATCTTGG+TGG 0.518098 7.4:+1431419 MS.gene22825:intron
AGGACGTGGATGTGATTTCA+AGG 0.520754 7.4:+1429798 MS.gene22825:CDS
ACAACTATGTGAGTTGGGAT+GGG 0.528306 7.4:+1431912 MS.gene22825:CDS
CCATCAGAAGCACGACCAGC+TGG 0.531119 7.4:-1429919 None:intergenic
AAATTTGTGAAACAACTTGT+GGG 0.532765 7.4:-1431262 None:intergenic
AATGAAGGGTAGCACCCTAC+TGG 0.532982 7.4:-1431470 None:intergenic
TACTTAATCTTGCACCAGTA+GGG 0.541138 7.4:+1431456 MS.gene22825:CDS
AAGCTTGCTTGCAGCTTCGG+TGG 0.542742 7.4:-1431942 None:intergenic
CGGAGCCAACTATGCTACAT+TGG 0.547703 7.4:+1430842 MS.gene22825:CDS
TTCTTACAACAATGCAGTAG+TGG 0.550306 7.4:+1431547 MS.gene22825:CDS
CAGCTGGTCGTGCTTCTGAT+GGG 0.550469 7.4:+1429920 MS.gene22825:CDS
GAAATTTGTGAAACAACTTG+TGG 0.551389 7.4:-1431263 None:intergenic
TTTGATCCTAAAGTTTACTG+TGG 0.552886 7.4:+1431833 MS.gene22825:CDS
TTTCCAAGTATATCTGGTGA+TGG 0.553970 7.4:-1431155 None:intergenic
GCTGAATAGCAAGGGAGAAA+GGG 0.557520 7.4:-1430914 None:intergenic
AACCATGAGAAGTAGGATGC+CGG 0.560111 7.4:-1431673 None:intergenic
CGATACCTACACTGTTCTGT+TGG 0.565280 7.4:+1431643 MS.gene22825:CDS
CCATAAGGACCAGATTCAGC+AGG 0.567818 7.4:-1429877 None:intergenic
GTACTTAATCTTGCACCAGT+AGG 0.570862 7.4:+1431455 MS.gene22825:CDS
CCCAACTCACATAGTTGTAA+GGG 0.576209 7.4:-1431907 None:intergenic
TGTTCCTGAAATGGAAAAGG+AGG 0.581672 7.4:-1432001 None:intergenic
TTTGGTTGAGCTGAATAGCA+AGG 0.582254 7.4:-1430923 None:intergenic
AACCTAGCAGTCATTGGCAC+AGG 0.585417 7.4:+1431221 MS.gene22825:CDS
TGACTCAAACCAACCAAACA+AGG 0.585659 7.4:-1429775 None:intergenic
ACTTACTTCAATAAACCAGC+TGG 0.586084 7.4:+1429904 MS.gene22825:CDS
GAAGTTCTACTAAGAATGAA+GGG 0.588435 7.4:-1431484 None:intergenic
GTGTTTGAACCATGAGAAGT+AGG 0.588802 7.4:-1431680 None:intergenic
CTAGCAGTCATTGGCACAGG+TGG 0.589232 7.4:+1431224 MS.gene22825:CDS
GTTAAAGAAGCTGATCAGCA+AGG 0.598763 7.4:+1430966 MS.gene22825:CDS
GTTGGTTTGAGTCAAGGACG+TGG 0.601280 7.4:+1429784 MS.gene22825:CDS
GCATGTTGTGGATATGGTGG+AGG 0.601305 7.4:+1431800 MS.gene22825:CDS
TATGGTACAAAAGCATGTTG+TGG 0.602150 7.4:+1431788 MS.gene22825:CDS
TTGGTTGAGCTGAATAGCAA+GGG 0.602445 7.4:-1430922 None:intergenic
AGATCCATTAAGAATAGCAT+AGG 0.606063 7.4:-1431969 None:intergenic
AGGAGCTATATAATCTTGGT+GGG 0.609668 7.4:+1431420 MS.gene22825:intron
GATTCAAATTCAGATACTGG+TGG 0.612266 7.4:+1429838 MS.gene22825:CDS
AGACTCGTGATTGATTTCAT+CGG 0.617834 7.4:+1429943 MS.gene22825:CDS
CACCTGTGCCAATGACTGCT+AGG 0.626922 7.4:-1431223 None:intergenic
AAGCTCCAACAGAACAGTGT+AGG 0.634682 7.4:-1431648 None:intergenic
AAAGCATGTTGTGGATATGG+TGG 0.654269 7.4:+1431797 MS.gene22825:CDS
AGTTTACTGTGGAAATACAA+AGG 0.664418 7.4:+1431844 MS.gene22825:CDS
ATAGGATCTGATTATAAACA+CGG 0.689852 7.4:+1430822 MS.gene22825:CDS
AGTATTAGGAAGAAGCACAG+TGG 0.690045 7.4:-1430868 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAACAAAAATAAACATTAA+GGG - chr7.4:1431751-1431770 None:intergenic 10.0%
!! ATTAGAATGTTAATATATTA+AGG - chr7.4:1431104-1431123 None:intergenic 10.0%
!! GTTAAAATCTTAAAAATTAT+AGG + chr7.4:1430314-1430333 MS.gene22825:intron 10.0%
!! TATAACAAAAATAAACATTA+AGG - chr7.4:1431752-1431771 None:intergenic 10.0%
!! AATGAACAATAATATATTCA+TGG - chr7.4:1429740-1429759 None:intergenic 15.0%
!! ATATAAATCAACTTATTGAT+TGG + chr7.4:1430189-1430208 MS.gene22825:intron 15.0%
!!! AAATAGTAAGTTGAAATTAA+CGG - chr7.4:1430570-1430589 None:intergenic 15.0%
!!! AATCAATAAGTTGATTTATA+TGG - chr7.4:1430190-1430209 None:intergenic 15.0%
!!! AGAGTTAATATTTATTTTCT+TGG - chr7.4:1430600-1430619 None:intergenic 15.0%
!!! ATAATTATGATTTTTATTGC+AGG + chr7.4:1430227-1430246 MS.gene22825:intron 15.0%
!!! ATTTCAACTTACTATTTTTA+TGG + chr7.4:1430573-1430592 MS.gene22825:intron 15.0%
!!! TAATTATGATTTTTATTGCA+GGG + chr7.4:1430228-1430247 MS.gene22825:intron 15.0%
!!! TCTTTGTATACATTTTATAT+TGG + chr7.4:1431179-1431198 MS.gene22825:CDS 15.0%
!!! TTATTTTTGTTATATGAAAC+AGG + chr7.4:1431758-1431777 MS.gene22825:intron 15.0%
!! ATAAGTTACTCTTACTTTAA+TGG - chr7.4:1431294-1431313 None:intergenic 20.0%
!! ATTTATGACTGATAAAATAC+TGG - chr7.4:1430515-1430534 None:intergenic 20.0%
!! GAATGTTAATATATTAAGGA+AGG - chr7.4:1431100-1431119 None:intergenic 20.0%
!! TGATTAGACACATAATTTAA+TGG + chr7.4:1430694-1430713 MS.gene22825:intron 20.0%
!!! ACATTTTACAATAGTTAGTA+AGG - chr7.4:1430033-1430052 None:intergenic 20.0%
! AAATTTGTGAAACAACTTGT+GGG - chr7.4:1431265-1431284 None:intergenic 25.0%
! AGTGATATCATTAGAGTTAA+GGG - chr7.4:1430010-1430029 None:intergenic 25.0%
! ATAACCTATGCTATTCTTAA+TGG + chr7.4:1431965-1431984 MS.gene22825:CDS 25.0%
! ATAGGATCTGATTATAAACA+CGG + chr7.4:1430822-1430841 MS.gene22825:CDS 25.0%
! GTTAATATATTAAGGAAGGA+AGG - chr7.4:1431096-1431115 None:intergenic 25.0%
! TATTAACTCTATCAACTGTT+AGG + chr7.4:1430610-1430629 MS.gene22825:intron 25.0%
! TGGAAATATTTGTTTGGTTA+TGG + chr7.4:1430484-1430503 MS.gene22825:intron 25.0%
!! AAAGATTTTCCAAGTATATC+TGG - chr7.4:1431164-1431183 None:intergenic 25.0%
!! AGGAAAATTTTACACAATGT+AGG - chr7.4:1430407-1430426 None:intergenic 25.0%
!! ATAGTATTTTCTCATTCACT+CGG + chr7.4:1430104-1430123 MS.gene22825:intron 25.0%
!! ATGATTTGCAAACAGATATT+AGG - chr7.4:1430379-1430398 None:intergenic 25.0%
!! TGATTTGCAAACAGATATTA+GGG - chr7.4:1430378-1430397 None:intergenic 25.0%
AAGGAAGGAAGGAAAATAAA+AGG - chr7.4:1431085-1431104 None:intergenic 30.0%
AGATCCATTAAGAATAGCAT+AGG - chr7.4:1431972-1431991 None:intergenic 30.0%
AGTCCATATCTACAATCAAT+AGG + chr7.4:1430804-1430823 MS.gene22825:CDS 30.0%
AGTTTACTGTGGAAATACAA+AGG + chr7.4:1431844-1431863 MS.gene22825:CDS 30.0%
ATTTGCAAACAGATATTAGG+GGG - chr7.4:1430376-1430395 None:intergenic 30.0%
CTGTGATTATTTGCATCTTT+AGG + chr7.4:1430430-1430449 MS.gene22825:intron 30.0%
GAAATTTGTGAAACAACTTG+TGG - chr7.4:1431266-1431285 None:intergenic 30.0%
GAAGTTCTACTAAGAATGAA+GGG - chr7.4:1431487-1431506 None:intergenic 30.0%
GAGTGATATCATTAGAGTTA+AGG - chr7.4:1430011-1430030 None:intergenic 30.0%
GATGCAAATAATCACAGATT+AGG - chr7.4:1430427-1430446 None:intergenic 30.0%
GATTTGCAAACAGATATTAG+GGG - chr7.4:1430377-1430396 None:intergenic 30.0%
GGAAATACAAAGGAGATAAA+TGG + chr7.4:1431854-1431873 MS.gene22825:CDS 30.0%
GTATTTCCACAGTAAACTTT+AGG - chr7.4:1431842-1431861 None:intergenic 30.0%
TATGAAACAGGTCTTCAATA+TGG + chr7.4:1431770-1431789 MS.gene22825:intron 30.0%
TCAATGTCTGAACTATTATG+AGG - chr7.4:1431509-1431528 None:intergenic 30.0%
TCTAGCTGGAAATATTTGTT+TGG + chr7.4:1430478-1430497 MS.gene22825:intron 30.0%
TGGTTGCAAATTGTTTCATT+TGG - chr7.4:1430944-1430963 None:intergenic 30.0%
TGTAGATATGGACTCAAAAA+TGG - chr7.4:1430798-1430817 None:intergenic 30.0%
TTGAAGTAAGTCATTCCATA+AGG - chr7.4:1429895-1429914 None:intergenic 30.0%
TTGTAGGAGCTATATAATCT+TGG + chr7.4:1431416-1431435 MS.gene22825:intron 30.0%
TTTGATCCTAAAGTTTACTG+TGG + chr7.4:1431833-1431852 MS.gene22825:CDS 30.0%
! AATACTTCTTTGTTTGTCAC+TGG + chr7.4:1430885-1430904 MS.gene22825:CDS 30.0%
! ACTTAGCACTACATTTTAAG+TGG - chr7.4:1430352-1430371 None:intergenic 30.0%
! ATACTTCTTTGTTTGTCACT+GGG + chr7.4:1430886-1430905 MS.gene22825:CDS 30.0%
! GATCCTATTGATTGTAGATA+TGG - chr7.4:1430810-1430829 None:intergenic 30.0%
! TAGTAAGTTGAAATTAACGG+TGG - chr7.4:1430567-1430586 None:intergenic 30.0%
! TAGTATTTTCTCATTCACTC+GGG + chr7.4:1430105-1430124 MS.gene22825:intron 30.0%
! TTTTGCTCACTGAAATTTGT+AGG + chr7.4:1431400-1431419 MS.gene22825:intron 30.0%
!! GTGACAAACAAAGAAGTATT+AGG - chr7.4:1430885-1430904 None:intergenic 30.0%
!! TTCAAGGCTATTTTCAACTT+TGG + chr7.4:1429814-1429833 MS.gene22825:CDS 30.0%
!!! AACCATTTTAAAACTGTTGG+TGG - chr7.4:1431026-1431045 None:intergenic 30.0%
!!! CCAACAGTTTTAAAATGGTT+CGG + chr7.4:1431026-1431045 MS.gene22825:intron 30.0%
AACTCTATCAACTGTTAGGA+TGG + chr7.4:1430614-1430633 MS.gene22825:intron 35.0%
ACTCTATCAACTGTTAGGAT+GGG + chr7.4:1430615-1430634 MS.gene22825:intron 35.0%
ACTTACTTCAATAAACCAGC+TGG + chr7.4:1429904-1429923 MS.gene22825:CDS 35.0%
AGATCACAATGTTCCTGAAA+TGG - chr7.4:1432013-1432032 None:intergenic 35.0%
AGCAGGTGAATTGAATTGAT+TGG + chr7.4:1430265-1430284 MS.gene22825:intron 35.0%
AGGAGCTATATAATCTTGGT+GGG + chr7.4:1431420-1431439 MS.gene22825:intron 35.0%
AGTTCAGACATTGACGAATT+TGG + chr7.4:1431515-1431534 MS.gene22825:CDS 35.0%
CAATGTTCCTGAAATGGAAA+AGG - chr7.4:1432007-1432026 None:intergenic 35.0%
CATTGTGATCTTCAACCTAT+AGG + chr7.4:1432022-1432041 MS.gene22825:CDS 35.0%
CTAAAGGTTATAAGAGTCGA+AGG - chr7.4:1430144-1430163 None:intergenic 35.0%
CTTCGACTCTTATAACCTTT+AGG + chr7.4:1430142-1430161 MS.gene22825:intron 35.0%
GATTCAAATTCAGATACTGG+TGG + chr7.4:1429838-1429857 MS.gene22825:CDS 35.0%
GGAAGTTCTACTAAGAATGA+AGG - chr7.4:1431488-1431507 None:intergenic 35.0%
GGAGATTCAAATTCAGATAC+TGG + chr7.4:1429835-1429854 MS.gene22825:CDS 35.0%
TACTTAATCTTGCACCAGTA+GGG + chr7.4:1431456-1431475 MS.gene22825:CDS 35.0%
TAGGAGCTATATAATCTTGG+TGG + chr7.4:1431419-1431438 MS.gene22825:intron 35.0%
TGGTTCAAACACATATCTCT+TGG + chr7.4:1431691-1431710 MS.gene22825:intron 35.0%
TTCTTACAACAATGCAGTAG+TGG + chr7.4:1431547-1431566 MS.gene22825:CDS 35.0%
TTTCCAAGTATATCTGGTGA+TGG - chr7.4:1431158-1431177 None:intergenic 35.0%
! ACAAAAGCATGTTGTGGATA+TGG + chr7.4:1431794-1431813 MS.gene22825:CDS 35.0%
! AGACTCGTGATTGATTTCAT+CGG + chr7.4:1429943-1429962 MS.gene22825:CDS 35.0%
! ATATGGTTAGTTAACTCAGC+TGG - chr7.4:1430173-1430192 None:intergenic 35.0%
! ATGGTTCGGAAAATTACGTA+TGG + chr7.4:1431040-1431059 MS.gene22825:intron 35.0%
! CTGATCAGCTTCTTTAACTT+TGG - chr7.4:1430964-1430983 None:intergenic 35.0%
! GGTTGGAAGTGAAATCATTT+TGG - chr7.4:1431205-1431224 None:intergenic 35.0%
! TATGGTACAAAAGCATGTTG+TGG + chr7.4:1431788-1431807 MS.gene22825:CDS 35.0%
!! TATATCTGGTGATGGAAGTT+TGG - chr7.4:1431150-1431169 None:intergenic 35.0%
!!! CCGAACCATTTTAAAACTGT+TGG - chr7.4:1431029-1431048 None:intergenic 35.0%
!!! TGCCACCAACAGTTTTAAAA+TGG + chr7.4:1431021-1431040 MS.gene22825:intron 35.0%
AAAGCATGTTGTGGATATGG+TGG + chr7.4:1431797-1431816 MS.gene22825:CDS 40.0%
ACCCTTACAACTATGTGAGT+TGG + chr7.4:1431906-1431925 MS.gene22825:CDS 40.0%
ATTCTGTCAGCTCAAGCTAT+TGG + chr7.4:1430768-1430787 MS.gene22825:intron 40.0%
CATTGACGAATTTGGATGCA+TGG + chr7.4:1431523-1431542 MS.gene22825:CDS 40.0%
CCCAACTCACATAGTTGTAA+GGG - chr7.4:1431910-1431929 None:intergenic 40.0%
CCCTTACAACTATGTGAGTT+GGG + chr7.4:1431907-1431926 MS.gene22825:CDS 40.0%
CTTCCATCACCAGATATACT+TGG + chr7.4:1431152-1431171 MS.gene22825:CDS 40.0%
GAACTGAACACACACTATGT+TGG - chr7.4:1431345-1431364 None:intergenic 40.0%
GCTAGATGTCTTGTCTTGTA+AGG - chr7.4:1430464-1430483 None:intergenic 40.0%
GTACTTAATCTTGCACCAGT+AGG + chr7.4:1431455-1431474 MS.gene22825:CDS 40.0%
GTGTTTGAACCATGAGAAGT+AGG - chr7.4:1431683-1431702 None:intergenic 40.0%
GTTAAAGAAGCTGATCAGCA+AGG + chr7.4:1430966-1430985 MS.gene22825:CDS 40.0%
TACAAGACAAGACATCTAGC+TGG + chr7.4:1430464-1430483 MS.gene22825:intron 40.0%
TCCCAACTCACATAGTTGTA+AGG - chr7.4:1431911-1431930 None:intergenic 40.0%
TCTTGGTGGGAGAACATTTA+TGG + chr7.4:1431433-1431452 MS.gene22825:CDS 40.0%
TGACTCAAACCAACCAAACA+AGG - chr7.4:1429778-1429797 None:intergenic 40.0%
TGTGTGTTCAGTTCTTTCTG+TGG + chr7.4:1431351-1431370 MS.gene22825:intron 40.0%
TGTTCCTGAAATGGAAAAGG+AGG - chr7.4:1432004-1432023 None:intergenic 40.0%
TTATAAGAGTCGAAGGATCG+TGG - chr7.4:1430137-1430156 None:intergenic 40.0%
TTGGTTGAGCTGAATAGCAA+GGG - chr7.4:1430925-1430944 None:intergenic 40.0%
TTTGGTTGAGCTGAATAGCA+AGG - chr7.4:1430926-1430945 None:intergenic 40.0%
! ACAACTATGTGAGTTGGGAT+GGG + chr7.4:1431912-1431931 MS.gene22825:CDS 40.0%
! AGTATTAGGAAGAAGCACAG+TGG - chr7.4:1430871-1430890 None:intergenic 40.0%
! TACAACTATGTGAGTTGGGA+TGG + chr7.4:1431911-1431930 MS.gene22825:CDS 40.0%
! TATAAGCTTGCTTGCAGCTT+CGG - chr7.4:1431948-1431967 None:intergenic 40.0%
! TGATCCTCCTTTTCCATTTC+AGG + chr7.4:1431997-1432016 MS.gene22825:CDS 40.0%
!! TGTTTGGTTGGTTTGAGTCA+AGG + chr7.4:1429778-1429797 MS.gene22825:CDS 40.0%
AACCATGAGAAGTAGGATGC+CGG - chr7.4:1431676-1431695 None:intergenic 45.0%
AAGCTCCAACAGAACAGTGT+AGG - chr7.4:1431651-1431670 None:intergenic 45.0%
ACTTCCAACCTAGCAGTCAT+TGG + chr7.4:1431215-1431234 MS.gene22825:CDS 45.0%
AGCAACTGAGAGACTTTCTC+TGG - chr7.4:1431609-1431628 None:intergenic 45.0%
AGCTGAATAGCAAGGGAGAA+AGG - chr7.4:1430918-1430937 None:intergenic 45.0%
AGGACGTGGATGTGATTTCA+AGG + chr7.4:1429798-1429817 MS.gene22825:CDS 45.0%
CGATACCTACACTGTTCTGT+TGG + chr7.4:1431643-1431662 MS.gene22825:CDS 45.0%
GCTGAATAGCAAGGGAGAAA+GGG - chr7.4:1430917-1430936 None:intergenic 45.0%
GGATGCCAATGTAGCATAGT+TGG - chr7.4:1430850-1430869 None:intergenic 45.0%
GGGTGCTAAAATAAGCAAGC+AGG + chr7.4:1430248-1430267 MS.gene22825:intron 45.0%
! CATGCTTGTGTTGCCTTGTT+TGG + chr7.4:1429762-1429781 MS.gene22825:CDS 45.0%
! CTGTTCTGTTGGAGCTTTTC+CGG + chr7.4:1431654-1431673 MS.gene22825:CDS 45.0%
!! CTTGTGTTGCCTTGTTTGGT+TGG + chr7.4:1429766-1429785 MS.gene22825:CDS 45.0%
AACCTAGCAGTCATTGGCAC+AGG + chr7.4:1431221-1431240 MS.gene22825:CDS 50.0%
AATGAAGGGTAGCACCCTAC+TGG - chr7.4:1431473-1431492 None:intergenic 50.0%
CCATAAGGACCAGATTCAGC+AGG - chr7.4:1429880-1429899 None:intergenic 50.0%
CCTGCTGAATCTGGTCCTTA+TGG + chr7.4:1429877-1429896 MS.gene22825:CDS 50.0%
CGGAGCCAACTATGCTACAT+TGG + chr7.4:1430842-1430861 MS.gene22825:CDS 50.0%
GCATGTTGTGGATATGGTGG+AGG + chr7.4:1431800-1431819 MS.gene22825:CDS 50.0%
TGTGCCAATGACTGCTAGGT+TGG - chr7.4:1431222-1431241 None:intergenic 50.0%
TTCCGGCATCCTACTTCTCA+TGG + chr7.4:1431671-1431690 MS.gene22825:CDS 50.0%
! GCAGCTTTTCCTGCTGAATC+TGG + chr7.4:1429868-1429887 MS.gene22825:CDS 50.0%
!! ACTCAGCTGGCTTGACCTAA+AGG - chr7.4:1430160-1430179 None:intergenic 50.0%
!! GTTGGTTTGAGTCAAGGACG+TGG + chr7.4:1429784-1429803 MS.gene22825:CDS 50.0%
CACCTGTGCCAATGACTGCT+AGG - chr7.4:1431226-1431245 None:intergenic 55.0%
CAGCTGGTCGTGCTTCTGAT+GGG + chr7.4:1429920-1429939 MS.gene22825:CDS 55.0%
CTAGCAGTCATTGGCACAGG+TGG + chr7.4:1431224-1431243 MS.gene22825:CDS 55.0%
! AAGCTTGCTTGCAGCTTCGG+TGG - chr7.4:1431945-1431964 None:intergenic 55.0%
CCAGCTGGTCGTGCTTCTGA+TGG + chr7.4:1429919-1429938 MS.gene22825:CDS 60.0%
! CCATCAGAAGCACGACCAGC+TGG - chr7.4:1429922-1429941 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr7.4 gene 1429721 1432048 1429721 ID=MS.gene22825
chr7.4 mRNA 1429721 1432048 1429721 ID=MS.gene22825.t1;Parent=MS.gene22825
chr7.4 exon 1429721 1429964 1429721 ID=MS.gene22825.t1.exon1;Parent=MS.gene22825.t1
chr7.4 CDS 1429721 1429964 1429721 ID=cds.MS.gene22825.t1;Parent=MS.gene22825.t1
chr7.4 exon 1430778 1430987 1430778 ID=MS.gene22825.t1.exon2;Parent=MS.gene22825.t1
chr7.4 CDS 1430778 1430987 1430778 ID=cds.MS.gene22825.t1;Parent=MS.gene22825.t1
chr7.4 exon 1431144 1431298 1431144 ID=MS.gene22825.t1.exon3;Parent=MS.gene22825.t1
chr7.4 CDS 1431144 1431298 1431144 ID=cds.MS.gene22825.t1;Parent=MS.gene22825.t1
chr7.4 exon 1431422 1431692 1431422 ID=MS.gene22825.t1.exon4;Parent=MS.gene22825.t1
chr7.4 CDS 1431422 1431692 1431422 ID=cds.MS.gene22825.t1;Parent=MS.gene22825.t1
chr7.4 exon 1431780 1432048 1431780 ID=MS.gene22825.t1.exon5;Parent=MS.gene22825.t1
chr7.4 CDS 1431780 1432048 1431780 ID=cds.MS.gene22825.t1;Parent=MS.gene22825.t1
Gene Sequence

>MS.gene22825

ATGAGTTCAAACACATCCATGAATATATTATTGTTCATTTTCATGCTTGTGTTGCCTTGTTTGGTTGGTTTGAGTCAAGGACGTGGATGTGATTTCAAGGCTATTTTCAACTTTGGAGATTCAAATTCAGATACTGGTGGATTTTATGCAGCTTTTCCTGCTGAATCTGGTCCTTATGGAATGACTTACTTCAATAAACCAGCTGGTCGTGCTTCTGATGGGAGACTCGTGATTGATTTCATCGGTAATCAACAATCTATATCATTTTCTACATTAATCGATGCTTCCCTTAACTCTAATGATATCACTCCTTACTAACTATTGTAAAATGTACATTATGTTTGTTGTGAACAAGATTTTTCTTTTGAATAATTGTTAGTATGATAGTATTTTCTCATTCACTCGGGCTTGAACCACGATCCTTCGACTCTTATAACCTTTAGGTCAAGCCAGCTGAGTTAACTAACCATATAAATCAACTTATTGATTGGTTTCTCTGATGAGATATAATTATGATTTTTATTGCAGGGTGCTAAAATAAGCAAGCAGGTGAATTGAATTGATTGGATGATATAGATAAATTCTTTTCAACTGTTAAAATCTTAAAAATTATAGGTGTATTAGAGAACCACTTAAAATGTAGTGCTAAGTGCCCCCTAATATCTGTTTGCAAATCATGCAATCCTACATTGTGTAAAATTTTCCTAATCTGTGATTATTTGCATCTTTAGGATAGTTTTCCTTACAAGACAAGACATCTAGCTGGAAATATTTGTTTGGTTATGGAATAGCCAGTATTTTATCAGTCATAAATATGCATGACATGACATGACATTTTTGTCTCCACCGTTAATTTCAACTTACTATTTTTATGGTCCAAGAAAATAAATATTAACTCTATCAACTGTTAGGATGGGCTGTATCTGTATATCTTGTTATGTGATGTCATTCACTCATCTTTCATATTTTACTATGATTAGACACATAATTTAATGGTTGAGAGCTATAATATCATGTATCAAACAATCATACATTTTTATTTATTTGATTCTGTCAGCTCAAGCTATTGGAATTCCATTTTTGAGTCCATATCTACAATCAATAGGATCTGATTATAAACACGGAGCCAACTATGCTACATTGGCATCCACTGTGCTTCTTCCTAATACTTCTTTGTTTGTCACTGGGATCAGCCCTTTCTCCCTTGCTATTCAGCTCAACCAAATGAAACAATTTGCAACCAAAGTTAAAGAAGCTGATCAGCAAGGTACAAAATGCACAAACTTTCTACTCTTATAACTGCCACCAACAGTTTTAAAATGGTTCGGAAAATTACGTATGGTACTGCATCTAAGTTTAGTCCTTTTATTTTCCTTCCTTCCTTAATATATTAACATTCTAATTTCTTTTAATTGTTGCTCAGAAACCAAACTTCCATCACCAGATATACTTGGAAAATCTTTGTATACATTTTATATTGGCCAAAATGATTTCACTTCCAACCTAGCAGTCATTGGCACAGGTGGTGTGCAAGAGTTTCTCCCACAAGTTGTTTCACAAATTTCTGCTACCATTAAAGTAAGAGTAACTTATGTCTATTAGTTAGTCACGAGACTCGACACCAACATAGTGTGTGTTCAGTTCTTTCTGTGGTGACAAAAATTGTTATTAACTTGAAATTTTGCTCACTGAAATTTGTAGGAGCTATATAATCTTGGTGGGAGAACATTTATGGTACTTAATCTTGCACCAGTAGGGTGCTACCCTTCATTCTTAGTAGAACTTCCTCATAATAGTTCAGACATTGACGAATTTGGATGCATGGTTTCTTACAACAATGCAGTAGTGGACTATAACAACATGTTGAAAGAGTCATTGAAACAAACCAGAGAAAGTCTCTCAGTTGCTTCTGTCATTTATGTCGATACCTACACTGTTCTGTTGGAGCTTTTCCGGCATCCTACTTCTCATGGTTCAAACACATATCTCTTGGCTTGTTTTAAAAGAACATTGCTAATTGTTATGTTCCCTTAATGTTTATTTTTGTTATATGAAACAGGTCTTCAATATGGTACAAAAGCATGTTGTGGATATGGTGGAGGTGAATACAACTTTGATCCTAAAGTTTACTGTGGAAATACAAAGGAGATAAATGGAAAAAGAGTGACAGCAACAGCATGTGATGACCCTTACAACTATGTGAGTTGGGATGGGATTCATGCCACCGAAGCTGCAAGCAAGCTTATAACCTATGCTATTCTTAATGGATCTTACTCTGATCCTCCTTTTCCATTTCAGGAACATTGTGATCTTCAACCTATAGGTTGA
Protein sequence

>MS.gene22825.t1

MSSNTSMNILLFIFMLVLPCLVGLSQGRGCDFKAIFNFGDSNSDTGGFYAAFPAESGPYGMTYFNKPAGRASDGRLVIDFIAQAIGIPFLSPYLQSIGSDYKHGANYATLASTVLLPNTSLFVTGISPFSLAIQLNQMKQFATKVKEADQQETKLPSPDILGKSLYTFYIGQNDFTSNLAVIGTGGVQEFLPQVVSQISATIKELYNLGGRTFMVLNLAPVGCYPSFLVELPHNSSDIDEFGCMVSYNNAVVDYNNMLKESLKQTRESLSVASVIYVDTYTVLLELFRHPTSHGLQYGTKACCGYGGGEYNFDPKVYCGNTKEINGKRVTATACDDPYNYVSWDGIHATEAASKLITYAILNGSYSDPPFPFQEHCDLQPIG