Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050628.t1 | XP_003626546.2 | 95.9 | 344 | 12 | 1 | 3 | 346 | 2 | 343 | 4.00E-186 | 660.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050628.t1 | Q944H5 | 58.1 | 365 | 118 | 6 | 10 | 345 | 55 | 413 | 1.4e-110 | 401.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050628.t1 | G7L414 | 95.9 | 344 | 12 | 1 | 3 | 346 | 2 | 343 | 2.9e-186 | 660.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene07262 | MS.gene050628 | PPI |
| MS.gene20783 | MS.gene050628 | PPI |
| MS.gene20834 | MS.gene050628 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050628.t1 | MTR_7g117030 | 95.954 | 346 | 11 | 2 | 1 | 346 | 1 | 343 | 0.0 | 681 |
| MS.gene050628.t1 | MTR_3g090820 | 64.960 | 371 | 101 | 6 | 4 | 345 | 24 | 394 | 1.04e-169 | 478 |
| MS.gene050628.t1 | MTR_3g090820 | 61.688 | 308 | 89 | 6 | 4 | 282 | 24 | 331 | 2.14e-128 | 371 |
| MS.gene050628.t1 | MTR_4g119770 | 26.647 | 334 | 198 | 12 | 22 | 334 | 14 | 321 | 2.93e-25 | 104 |
| MS.gene050628.t1 | MTR_2g436930 | 27.660 | 329 | 197 | 11 | 22 | 333 | 15 | 319 | 3.81e-24 | 101 |
| MS.gene050628.t1 | MTR_7g064980 | 28.626 | 262 | 164 | 6 | 88 | 343 | 75 | 319 | 3.08e-21 | 93.2 |
| MS.gene050628.t1 | MTR_4g119770 | 26.277 | 274 | 164 | 10 | 22 | 283 | 14 | 261 | 2.02e-19 | 87.0 |
| MS.gene050628.t1 | MTR_4g018750 | 25.444 | 338 | 213 | 10 | 8 | 343 | 3 | 303 | 4.49e-18 | 84.0 |
| MS.gene050628.t1 | MTR_7g066690 | 23.567 | 314 | 202 | 7 | 9 | 321 | 6 | 282 | 2.44e-17 | 81.6 |
| MS.gene050628.t1 | MTR_5g081150 | 27.237 | 257 | 165 | 6 | 88 | 338 | 81 | 321 | 2.49e-17 | 82.0 |
| MS.gene050628.t1 | MTR_3g104600 | 28.413 | 271 | 164 | 12 | 81 | 335 | 70 | 326 | 3.42e-17 | 81.6 |
| MS.gene050628.t1 | MTR_4g018750 | 26.298 | 289 | 180 | 8 | 8 | 295 | 3 | 259 | 3.61e-16 | 78.2 |
| MS.gene050628.t1 | MTR_3g107510 | 25.000 | 328 | 187 | 7 | 17 | 338 | 119 | 393 | 2.37e-15 | 77.0 |
| MS.gene050628.t1 | MTR_3g462140 | 25.161 | 310 | 195 | 8 | 13 | 321 | 8 | 281 | 2.37e-15 | 75.9 |
| MS.gene050628.t1 | MTR_1g012030 | 27.099 | 262 | 159 | 8 | 84 | 338 | 174 | 410 | 3.31e-15 | 76.6 |
| MS.gene050628.t1 | MTR_2g436930 | 26.971 | 241 | 149 | 8 | 108 | 333 | 1 | 229 | 4.86e-15 | 73.9 |
| MS.gene050628.t1 | MTR_6g091800 | 24.521 | 261 | 166 | 9 | 88 | 335 | 61 | 303 | 7.26e-15 | 74.7 |
| MS.gene050628.t1 | MTR_8g096050 | 25.098 | 255 | 171 | 7 | 88 | 339 | 266 | 503 | 7.49e-15 | 75.9 |
| MS.gene050628.t1 | MTR_6g034145 | 24.715 | 263 | 163 | 10 | 88 | 335 | 7 | 249 | 7.77e-15 | 73.9 |
| MS.gene050628.t1 | MTR_3g104500 | 23.442 | 337 | 219 | 9 | 5 | 336 | 18 | 320 | 2.11e-14 | 73.6 |
| MS.gene050628.t1 | MTR_3g100570 | 23.642 | 313 | 211 | 7 | 17 | 322 | 3 | 294 | 3.33e-14 | 72.8 |
| MS.gene050628.t1 | MTR_7g084400 | 23.200 | 250 | 173 | 6 | 91 | 339 | 255 | 486 | 9.97e-14 | 72.4 |
| MS.gene050628.t1 | MTR_6g034515 | 25.338 | 296 | 153 | 12 | 34 | 317 | 81 | 320 | 5.39e-13 | 69.7 |
| MS.gene050628.t1 | MTR_8g066975 | 24.921 | 317 | 190 | 10 | 32 | 339 | 20 | 297 | 1.03e-12 | 68.2 |
| MS.gene050628.t1 | MTR_5g032420 | 25.664 | 226 | 129 | 7 | 17 | 240 | 134 | 322 | 2.43e-12 | 67.4 |
| MS.gene050628.t1 | MTR_5g032420 | 26.006 | 323 | 209 | 13 | 26 | 335 | 12 | 317 | 2.93e-11 | 63.9 |
| MS.gene050628.t1 | MTR_4g114320 | 25.000 | 332 | 182 | 12 | 17 | 338 | 120 | 394 | 2.74e-12 | 67.8 |
| MS.gene050628.t1 | MTR_5g009500 | 24.513 | 359 | 211 | 11 | 1 | 338 | 19 | 338 | 4.62e-12 | 66.6 |
| MS.gene050628.t1 | MTR_5g030530 | 25.316 | 316 | 190 | 11 | 32 | 339 | 20 | 297 | 1.69e-11 | 64.7 |
| MS.gene050628.t1 | MTR_8g098240 | 23.313 | 326 | 183 | 7 | 18 | 335 | 318 | 584 | 2.24e-11 | 65.5 |
| MS.gene050628.t1 | MTR_6g091800 | 24.444 | 225 | 141 | 8 | 88 | 302 | 61 | 266 | 2.45e-11 | 63.9 |
| MS.gene050628.t1 | MTR_8g027975 | 25.217 | 345 | 187 | 15 | 19 | 335 | 49 | 350 | 4.98e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050628.t1 | AT2G46320 | 64.525 | 358 | 101 | 6 | 5 | 342 | 10 | 361 | 9.73e-153 | 434 |
| MS.gene050628.t1 | AT4G27940 | 58.082 | 365 | 118 | 6 | 10 | 345 | 55 | 413 | 4.65e-145 | 416 |
| MS.gene050628.t1 | AT2G46320 | 71.260 | 254 | 65 | 3 | 92 | 342 | 14 | 262 | 1.19e-121 | 351 |
| MS.gene050628.t1 | AT2G46320 | 71.260 | 254 | 65 | 3 | 92 | 342 | 14 | 262 | 1.19e-121 | 351 |
| MS.gene050628.t1 | AT2G46320 | 71.260 | 254 | 65 | 3 | 92 | 342 | 14 | 262 | 1.19e-121 | 351 |
| MS.gene050628.t1 | AT2G46320 | 71.226 | 212 | 55 | 2 | 92 | 302 | 14 | 220 | 9.22e-99 | 291 |
| MS.gene050628.t1 | AT5G48970 | 27.219 | 338 | 200 | 11 | 17 | 332 | 15 | 328 | 1.37e-24 | 102 |
| MS.gene050628.t1 | AT3G55640 | 30.078 | 256 | 153 | 7 | 88 | 335 | 85 | 322 | 4.18e-21 | 92.8 |
| MS.gene050628.t1 | AT3G55640 | 30.078 | 256 | 153 | 7 | 88 | 335 | 85 | 322 | 4.18e-21 | 92.8 |
| MS.gene050628.t1 | AT5G48970 | 27.481 | 262 | 160 | 8 | 89 | 332 | 8 | 257 | 3.50e-19 | 86.3 |
| MS.gene050628.t1 | AT3G21390 | 25.000 | 332 | 203 | 12 | 22 | 333 | 20 | 325 | 4.26e-19 | 87.4 |
| MS.gene050628.t1 | AT3G21390 | 25.000 | 332 | 203 | 12 | 22 | 333 | 42 | 347 | 4.44e-19 | 87.4 |
| MS.gene050628.t1 | AT3G53940 | 28.409 | 264 | 155 | 7 | 88 | 339 | 120 | 361 | 8.27e-19 | 86.7 |
| MS.gene050628.t1 | AT5G51050 | 25.271 | 277 | 177 | 8 | 68 | 339 | 245 | 496 | 7.11e-18 | 85.1 |
| MS.gene050628.t1 | AT2G37890 | 27.027 | 259 | 163 | 7 | 88 | 338 | 92 | 332 | 3.98e-17 | 81.6 |
| MS.gene050628.t1 | AT5G56450 | 23.220 | 323 | 213 | 8 | 21 | 339 | 35 | 326 | 5.11e-17 | 81.3 |
| MS.gene050628.t1 | AT5G58970 | 24.768 | 323 | 207 | 8 | 13 | 335 | 9 | 295 | 2.76e-16 | 79.0 |
| MS.gene050628.t1 | AT4G26180 | 26.740 | 273 | 168 | 9 | 81 | 339 | 56 | 310 | 5.82e-16 | 78.2 |
| MS.gene050628.t1 | AT5G07320 | 22.868 | 258 | 177 | 5 | 78 | 335 | 238 | 473 | 1.96e-15 | 77.4 |
| MS.gene050628.t1 | AT4G32400 | 23.292 | 322 | 200 | 5 | 17 | 338 | 111 | 385 | 4.41e-15 | 76.3 |
| MS.gene050628.t1 | AT4G11440 | 26.370 | 292 | 173 | 7 | 59 | 339 | 344 | 604 | 1.99e-14 | 74.7 |
| MS.gene050628.t1 | AT4G11440 | 26.370 | 292 | 173 | 7 | 59 | 339 | 344 | 604 | 1.99e-14 | 74.7 |
| MS.gene050628.t1 | AT5G58970 | 25.362 | 276 | 174 | 8 | 13 | 287 | 9 | 253 | 2.85e-14 | 72.4 |
| MS.gene050628.t1 | AT3G54110 | 23.734 | 316 | 202 | 9 | 23 | 336 | 18 | 296 | 1.60e-13 | 70.9 |
| MS.gene050628.t1 | AT4G26180 | 26.613 | 248 | 150 | 9 | 81 | 314 | 56 | 285 | 4.23e-13 | 69.3 |
| MS.gene050628.t1 | AT4G01100 | 25.291 | 344 | 194 | 13 | 19 | 338 | 40 | 344 | 1.41e-12 | 68.2 |
| MS.gene050628.t1 | AT5G61810 | 23.755 | 261 | 171 | 7 | 81 | 338 | 97 | 332 | 1.56e-12 | 68.2 |
| MS.gene050628.t1 | AT4G01100 | 25.086 | 291 | 178 | 9 | 70 | 338 | 22 | 294 | 1.84e-12 | 67.4 |
| MS.gene050628.t1 | AT2G22500 | 25.857 | 321 | 201 | 9 | 26 | 335 | 12 | 306 | 1.87e-12 | 67.8 |
| MS.gene050628.t1 | AT5G61810 | 24.521 | 261 | 169 | 8 | 81 | 338 | 240 | 475 | 2.23e-12 | 68.2 |
| MS.gene050628.t1 | AT5G46800 | 24.679 | 312 | 200 | 8 | 32 | 339 | 20 | 300 | 1.36e-11 | 65.1 |
| MS.gene050628.t1 | AT5G46800 | 24.679 | 312 | 200 | 8 | 32 | 339 | 20 | 300 | 1.36e-11 | 65.1 |
| MS.gene050628.t1 | AT5G46800 | 24.679 | 312 | 200 | 8 | 32 | 339 | 20 | 300 | 1.36e-11 | 65.1 |
| MS.gene050628.t1 | AT4G24570 | 25.078 | 319 | 208 | 9 | 26 | 335 | 12 | 308 | 3.93e-11 | 63.5 |
| MS.gene050628.t1 | AT4G01100 | 24.581 | 358 | 193 | 14 | 19 | 338 | 40 | 358 | 9.12e-11 | 62.8 |
Find 90 sgRNAs with CRISPR-Local
Find 233 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAACAACATTGCTTGAAATT+TGG | 0.154638 | 7.3:-1149120 | MS.gene050628:CDS |
| GGGACAGGGATGGAGGATTT+AGG | 0.160290 | 7.3:-1148956 | MS.gene050628:intron |
| GTCATCTTTAATGCCCTTTC+AGG | 0.166030 | 7.3:+1149148 | None:intergenic |
| GGAACATAAGGCGTTAAATT+TGG | 0.187425 | 7.3:+1151097 | None:intergenic |
| AGTTGATTGTCTATGATTTA+AGG | 0.212914 | 7.3:+1148845 | None:intergenic |
| AGAATACTTGTTCCCTTGTC+TGG | 0.217109 | 7.3:+1150510 | None:intergenic |
| TAGTACACAGGTACCGTTTC+TGG | 0.251953 | 7.3:-1150329 | MS.gene050628:CDS |
| GGTTAATTGCGCGTCGGAAT+TGG | 0.278013 | 7.3:+1152216 | None:intergenic |
| ATACTTGACAACTTCGTAAA+AGG | 0.294575 | 7.3:+1148869 | None:intergenic |
| GGACAGGGATGGAGGATTTA+GGG | 0.304513 | 7.3:-1148955 | MS.gene050628:intron |
| GGCTTGGAGCACAACTTTCT+AGG | 0.304746 | 7.3:-1150299 | MS.gene050628:CDS |
| TGTACTACACCTGCATATAA+AGG | 0.313117 | 7.3:-1151860 | MS.gene050628:CDS |
| CGTTTCTGGTGGACTGGGCT+TGG | 0.324948 | 7.3:-1150315 | MS.gene050628:CDS |
| TTCCATACTCTGCAATTTGC+TGG | 0.354950 | 7.3:-1150272 | MS.gene050628:CDS |
| TGCAAGTTCTACAGGATAAC+AGG | 0.358144 | 7.3:+1151033 | None:intergenic |
| GAGAGGCACAAATGCTAGTT+TGG | 0.364429 | 7.3:-1151359 | MS.gene050628:CDS |
| GCAAGTGATCCTGCTACTAA+TGG | 0.377970 | 7.3:+1151076 | None:intergenic |
| GACCAGCAAATTGCAGAGTA+TGG | 0.391724 | 7.3:+1150270 | None:intergenic |
| CAAGTGCCACAGCTGTCCTT+GGG | 0.398207 | 7.3:-1150102 | MS.gene050628:CDS |
| GCAAGTGCCACAGCTGTCCT+TGG | 0.401027 | 7.3:-1150103 | MS.gene050628:CDS |
| AGGTACCGTTTCTGGTGGAC+TGG | 0.406869 | 7.3:-1150321 | MS.gene050628:CDS |
| CGAGTCCTTGCAAGTTCTAC+AGG | 0.427883 | 7.3:+1151025 | None:intergenic |
| ACAGTGTTAGTTTGAAAAGA+AGG | 0.433649 | 7.3:+1151988 | None:intergenic |
| AGACTTCAATCGCAAGCTGC+TGG | 0.446199 | 7.3:-1152042 | MS.gene050628:CDS |
| AGGATCACTTGCACGCTCAT+TGG | 0.449837 | 7.3:-1151065 | MS.gene050628:CDS |
| ATTTGTGCCTCTCCACAATC+TGG | 0.449957 | 7.3:+1151369 | None:intergenic |
| GTACTACACCTGCATATAAA+GGG | 0.450097 | 7.3:-1151859 | MS.gene050628:CDS |
| GATGAAAGCGGCGCCGGCGG+CGG | 0.462321 | 7.3:+1152174 | None:intergenic |
| GGAGATGAAAGCGGCGCCGG+CGG | 0.463551 | 7.3:+1152171 | None:intergenic |
| GCGACAAACCTCCAGGTGTA+TGG | 0.468692 | 7.3:-1150557 | MS.gene050628:CDS |
| GAATACTTGTTCCCTTGTCT+GGG | 0.471188 | 7.3:+1150511 | None:intergenic |
| CAACATTGCTTGAAATTTGG+AGG | 0.471970 | 7.3:-1149117 | MS.gene050628:intron |
| GCTCCCCGTGTAGGTCGTGC+TGG | 0.474861 | 7.3:-1148915 | MS.gene050628:CDS |
| GACAGGGATGGAGGATTTAG+GGG | 0.476159 | 7.3:-1148954 | MS.gene050628:intron |
| ACCTACACGGGGAGCAATGC+CGG | 0.477293 | 7.3:+1148923 | None:intergenic |
| GGCGGAGATGAAAGCGGCGC+CGG | 0.478622 | 7.3:+1152168 | None:intergenic |
| CTCTAACCTCTATCTGTCGT+CGG | 0.479758 | 7.3:+1150005 | None:intergenic |
| AATAAAATCTTACCGGCTCA+AGG | 0.482311 | 7.3:+1150244 | None:intergenic |
| CCTGCTACTAATGGAACATA+AGG | 0.485889 | 7.3:+1151085 | None:intergenic |
| CACAAATGCTAGTTTGGCAT+TGG | 0.489693 | 7.3:-1151353 | MS.gene050628:CDS |
| GCTTGGAGCACAACTTTCTA+GGG | 0.502357 | 7.3:-1150298 | MS.gene050628:CDS |
| ATCAGCTGCCACGTGTCCGC+TGG | 0.503371 | 7.3:-1150041 | MS.gene050628:CDS |
| CCTTATGTTCCATTAGTAGC+AGG | 0.504743 | 7.3:-1151085 | MS.gene050628:CDS |
| TGCCACGTGTCCGCTGGACG+TGG | 0.515192 | 7.3:-1150035 | MS.gene050628:CDS |
| TCTATCGTCCCTTTATATGC+AGG | 0.519442 | 7.3:+1151851 | None:intergenic |
| ACAGGGATGGAGGATTTAGG+GGG | 0.521269 | 7.3:-1148953 | MS.gene050628:intron |
| GGTGTATGGAAGACATTACT+TGG | 0.524244 | 7.3:-1150543 | MS.gene050628:CDS |
| TTGCTGGTCAACCCTTGAGC+CGG | 0.524286 | 7.3:-1150256 | MS.gene050628:intron |
| ACACAAGGCGACAAACCTCC+AGG | 0.525728 | 7.3:-1150564 | MS.gene050628:CDS |
| GAACGCGCTTTATCCGCCGC+CGG | 0.526096 | 7.3:-1152187 | MS.gene050628:CDS |
| CAAGCCCAGTCCACCAGAAA+CGG | 0.526927 | 7.3:+1150316 | None:intergenic |
| GGTACCGTTTCTGGTGGACT+GGG | 0.527389 | 7.3:-1150320 | MS.gene050628:CDS |
| TCTAACCTCTATCTGTCGTC+GGG | 0.533502 | 7.3:+1150006 | None:intergenic |
| GGTACCTTGGCGACGTCGAG+TGG | 0.539208 | 7.3:+1152133 | None:intergenic |
| ATTTGATAAACGTCATGGTA+AGG | 0.540492 | 7.3:+1152015 | None:intergenic |
| ATAAAATCTTACCGGCTCAA+GGG | 0.547639 | 7.3:+1150245 | None:intergenic |
| TTCCCAGAAGGATCCTGAAA+GGG | 0.553074 | 7.3:-1149161 | MS.gene050628:intron |
| GGTCGTGCTGGTCCATCTGT+TGG | 0.563416 | 7.3:-1148903 | MS.gene050628:CDS |
| ACTTGCAAGGACTCGCATGC+AGG | 0.564082 | 7.3:-1151017 | MS.gene050628:intron |
| TGGACCAGCACGACCTACAC+GGG | 0.568914 | 7.3:+1148911 | None:intergenic |
| ACTCTACAAAGTTATACGTC+AGG | 0.569612 | 7.3:-1151825 | MS.gene050628:intron |
| GATGAATTTGATAAACGTCA+TGG | 0.582753 | 7.3:+1152010 | None:intergenic |
| AGGAAGGATTTACCAGATTG+TGG | 0.583228 | 7.3:-1151381 | MS.gene050628:CDS |
| AGTAATGTCTTCCATACACC+TGG | 0.588893 | 7.3:+1150546 | None:intergenic |
| CACGATGGTTAATTGCGCGT+CGG | 0.590702 | 7.3:+1152210 | None:intergenic |
| AAGATAGCTTACACTTGGCA+TGG | 0.593539 | 7.3:+1151330 | None:intergenic |
| ACCGGCATTGCTCCCCGTGT+AGG | 0.596855 | 7.3:-1148924 | MS.gene050628:CDS |
| GAGACAACTATGCCAACAGA+TGG | 0.599335 | 7.3:+1148891 | None:intergenic |
| ATTCCCAGAAGGATCCTGAA+AGG | 0.603384 | 7.3:-1149162 | MS.gene050628:intron |
| TGCCACGTCCAGCGGACACG+TGG | 0.606347 | 7.3:+1150033 | None:intergenic |
| ATGGACCAGCACGACCTACA+CGG | 0.609123 | 7.3:+1148910 | None:intergenic |
| TGGAGTCATCAACCCAGACA+AGG | 0.612286 | 7.3:-1150523 | MS.gene050628:CDS |
| GTTATCCTGTAGAACTTGCA+AGG | 0.616548 | 7.3:-1151030 | MS.gene050628:CDS |
| CAATCCACTCGACGTCGCCA+AGG | 0.620027 | 7.3:-1152137 | MS.gene050628:intron |
| TATACTCCTCCATAAAGTTG+CGG | 0.620998 | 7.3:+1151134 | None:intergenic |
| GTCGAGTGGATTGACGATGA+CGG | 0.648207 | 7.3:+1152147 | None:intergenic |
| ATTAGCCCCAAGGACAGCTG+TGG | 0.649342 | 7.3:+1150096 | None:intergenic |
| AAGTGCCACAGCTGTCCTTG+GGG | 0.650546 | 7.3:-1150101 | MS.gene050628:CDS |
| AAATTGTTTAAATAGTACAC+AGG | 0.651661 | 7.3:-1150341 | MS.gene050628:intron |
| GATGACGGCGGAGATGAAAG+CGG | 0.658693 | 7.3:+1152162 | None:intergenic |
| TACACAGGTACCGTTTCTGG+TGG | 0.666185 | 7.3:-1150326 | MS.gene050628:CDS |
| TTGCGGAAAATATCATAACA+AGG | 0.668536 | 7.3:+1151151 | None:intergenic |
| GGACCAGCACGACCTACACG+GGG | 0.671952 | 7.3:+1148912 | None:intergenic |
| AATGTCTTCCATACACCTGG+AGG | 0.674814 | 7.3:+1150549 | None:intergenic |
| TAGGCATTTAGAGTAACACA+AGG | 0.682988 | 7.3:-1150579 | MS.gene050628:CDS |
| GGATTTACCAGATTGTGGAG+AGG | 0.683620 | 7.3:-1151376 | MS.gene050628:CDS |
| GGAGTCATCAACCCAGACAA+GGG | 0.683830 | 7.3:-1150522 | MS.gene050628:CDS |
| GGATAAAGCGCGTTCCACGA+TGG | 0.696816 | 7.3:+1152195 | None:intergenic |
| CGACGCGCAATTAACCATCG+TGG | 0.713020 | 7.3:-1152209 | MS.gene050628:CDS |
| GAGTGGATTGACGATGACGG+CGG | 0.727354 | 7.3:+1152150 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAATATAATAAAATCTTAC+CGG | + | chr7.3:1150840-1150859 | None:intergenic | 10.0% |
| !! | AATAATTACTTACTATTAAG+AGG | - | chr7.3:1149648-1149667 | MS.gene050628:intron | 15.0% |
| !! | ATAATTACTTACTATTAAGA+GGG | - | chr7.3:1149649-1149668 | MS.gene050628:intron | 15.0% |
| !!! | AACTTGTTTTTGAAAATATT+AGG | - | chr7.3:1149523-1149542 | MS.gene050628:intron | 15.0% |
| !! | AAAAAAATTCTTGGATTTGT+TGG | - | chr7.3:1150941-1150960 | MS.gene050628:intron | 20.0% |
| !! | AAAATGTAGTAAGATTGTTA+AGG | + | chr7.3:1151636-1151655 | None:intergenic | 20.0% |
| !! | AAATGTAGTAAGATTGTATA+AGG | + | chr7.3:1151470-1151489 | None:intergenic | 20.0% |
| !! | AAATTGTTTAAATAGTACAC+AGG | - | chr7.3:1150733-1150752 | MS.gene050628:intron | 20.0% |
| !! | AATCAAAGTAATTACTATTG+AGG | + | chr7.3:1150713-1150732 | None:intergenic | 20.0% |
| !! | AGAAATAACATAATCTACAA+TGG | + | chr7.3:1152031-1152050 | None:intergenic | 20.0% |
| !! | TCAATTCAATACTATATTTG+CGG | - | chr7.3:1149149-1149168 | MS.gene050628:CDS | 20.0% |
| !! | TCTTTATAATTACTTCTCTA+AGG | - | chr7.3:1150407-1150426 | MS.gene050628:intron | 20.0% |
| !!! | AACAAAACTTGCATAATTTT+CGG | - | chr7.3:1151778-1151797 | MS.gene050628:intron | 20.0% |
| !!! | AATGATTATACTGTTCATTT+TGG | - | chr7.3:1149806-1149825 | MS.gene050628:intron | 20.0% |
| !!! | ATACAATCTTACTACATTTT+TGG | - | chr7.3:1151471-1151490 | MS.gene050628:intron | 20.0% |
| !!! | CATACTTTTTTGCTAAAAAA+TGG | - | chr7.3:1151877-1151896 | MS.gene050628:CDS | 20.0% |
| !!! | CATTATTTTTGAAGTGATAT+TGG | - | chr7.3:1151985-1152004 | MS.gene050628:intron | 20.0% |
| !!! | CATTTTTTAGCAAAAAAGTA+TGG | + | chr7.3:1151879-1151898 | None:intergenic | 20.0% |
| !!! | GATTATTATATTTGACTTCT+GGG | + | chr7.3:1151150-1151169 | None:intergenic | 20.0% |
| !!! | TAACAATCTTACTACATTTT+TGG | - | chr7.3:1151636-1151655 | MS.gene050628:intron | 20.0% |
| !!! | TACTTTTTCTTCATATTTTC+AGG | + | chr7.3:1150284-1150303 | None:intergenic | 20.0% |
| !!! | TATTCTATTTCCTTGATTTT+AGG | + | chr7.3:1150251-1150270 | None:intergenic | 20.0% |
| !!! | TGATTATTATATTTGACTTC+TGG | + | chr7.3:1151151-1151170 | None:intergenic | 20.0% |
| !!! | TTACAAACTTTCAACTTTTT+TGG | - | chr7.3:1151306-1151325 | MS.gene050628:intron | 20.0% |
| !!! | TTCAATACTTTTTTGTTTTC+AGG | - | chr7.3:1149174-1149193 | MS.gene050628:intron | 20.0% |
| !!! | TTCTGGTTACAAATATATTT+GGG | - | chr7.3:1149473-1149492 | MS.gene050628:intron | 20.0% |
| !!! | TTTCTGGTTACAAATATATT+TGG | - | chr7.3:1149472-1149491 | MS.gene050628:intron | 20.0% |
| ! | AAAAATTAAGAGAGTCGTTT+AGG | - | chr7.3:1152055-1152074 | MS.gene050628:intron | 25.0% |
| ! | AAAATTAAGAGAGTCGTTTA+GGG | - | chr7.3:1152056-1152075 | MS.gene050628:intron | 25.0% |
| ! | AAGTGTGATATAGTTAGAAT+TGG | - | chr7.3:1151717-1151736 | MS.gene050628:intron | 25.0% |
| ! | ACACTAATAAAAGCAACTAA+TGG | - | chr7.3:1150351-1150370 | MS.gene050628:intron | 25.0% |
| ! | ACGAAAACGAAATTAAAATG+TGG | + | chr7.3:1151217-1151236 | None:intergenic | 25.0% |
| ! | AGTGTGATATAGTTAGAATT+GGG | - | chr7.3:1151718-1151737 | MS.gene050628:intron | 25.0% |
| ! | AGTTGATTGTCTATGATTTA+AGG | + | chr7.3:1152232-1152251 | None:intergenic | 25.0% |
| ! | ATGCATAACTAAACTTTCAT+AGG | - | chr7.3:1151410-1151429 | MS.gene050628:intron | 25.0% |
| ! | CAAATATATTTGGGCTAATA+TGG | - | chr7.3:1149482-1149501 | MS.gene050628:intron | 25.0% |
| ! | CAGATAAGGAAAAAAATTCT+TGG | - | chr7.3:1150932-1150951 | MS.gene050628:intron | 25.0% |
| ! | CGAAAACGAAATTAAAATGT+GGG | + | chr7.3:1151216-1151235 | None:intergenic | 25.0% |
| ! | GATAAAGTCAATAAGTTAAC+TGG | + | chr7.3:1150454-1150473 | None:intergenic | 25.0% |
| ! | TAAAATTATCACTAAGAGCA+AGG | + | chr7.3:1151100-1151119 | None:intergenic | 25.0% |
| ! | TAACTAAACTTTCATAGGTA+TGG | - | chr7.3:1151415-1151434 | MS.gene050628:intron | 25.0% |
| ! | TAATTGCTATCCTAAAATCA+AGG | - | chr7.3:1150238-1150257 | MS.gene050628:intron | 25.0% |
| ! | TCTAAGGAAATTATGTTATG+TGG | - | chr7.3:1150423-1150442 | MS.gene050628:intron | 25.0% |
| ! | TTGATATCTGAACTTATTTC+TGG | - | chr7.3:1149456-1149475 | MS.gene050628:intron | 25.0% |
| !! | CTTGTCTGAAATAGAAAAAT+TGG | + | chr7.3:1149014-1149033 | None:intergenic | 25.0% |
| !!! | CAAGTTTTAAAATTCCAAAC+AGG | + | chr7.3:1149509-1149528 | None:intergenic | 25.0% |
| !!! | TACATGTTCCCTTTTATTTA+GGG | + | chr7.3:1149557-1149576 | None:intergenic | 25.0% |
| !!! | TCTTCATATTTTCAGGTAAT+AGG | + | chr7.3:1150277-1150296 | None:intergenic | 25.0% |
| AAGAAGAATTGGATTGATTG+AGG | + | chr7.3:1148982-1149001 | None:intergenic | 30.0% | |
| AGTTATATACAGTCTACTGA+TGG | - | chr7.3:1149860-1149879 | MS.gene050628:intron | 30.0% | |
| AGTTTATAGGAGATATGGAA+AGG | - | chr7.3:1149431-1149450 | MS.gene050628:intron | 30.0% | |
| ATACTTGACAACTTCGTAAA+AGG | + | chr7.3:1152208-1152227 | None:intergenic | 30.0% | |
| ATGCATGAATTTGTCACATT+GGG | - | chr7.3:1151502-1151521 | MS.gene050628:intron | 30.0% | |
| ATTTGATAAACGTCATGGTA+AGG | + | chr7.3:1149062-1149081 | None:intergenic | 30.0% | |
| CATAATTATCCTAACTGTGT+TGG | + | chr7.3:1151393-1151412 | None:intergenic | 30.0% | |
| CATATCTCCTATAAACTTAG+GGG | + | chr7.3:1149428-1149447 | None:intergenic | 30.0% | |
| CCATATCTCCTATAAACTTA+GGG | + | chr7.3:1149429-1149448 | None:intergenic | 30.0% | |
| CTAAATAAAAGGGAACATGT+AGG | - | chr7.3:1149556-1149575 | MS.gene050628:intron | 30.0% | |
| GAACAACATTGCTTGAAATT+TGG | - | chr7.3:1151954-1151973 | MS.gene050628:intron | 30.0% | |
| GATGAATTTGATAAACGTCA+TGG | + | chr7.3:1149067-1149086 | None:intergenic | 30.0% | |
| GGATGAATTTGAAGAAGAAT+TGG | + | chr7.3:1148993-1149012 | None:intergenic | 30.0% | |
| TAAATTCCAACCTATTTGAC+AGG | + | chr7.3:1149899-1149918 | None:intergenic | 30.0% | |
| TATGCATGAATTTGTCACAT+TGG | - | chr7.3:1151501-1151520 | MS.gene050628:intron | 30.0% | |
| TCCATATCTCCTATAAACTT+AGG | + | chr7.3:1149430-1149449 | None:intergenic | 30.0% | |
| TGCAATTTGTAGACTAATGT+GGG | - | chr7.3:1150205-1150224 | MS.gene050628:intron | 30.0% | |
| TTACTCTAAATGCCTAAGAA+CGG | + | chr7.3:1150491-1150510 | None:intergenic | 30.0% | |
| TTGAAATGAAGAAAGCAACT+AGG | + | chr7.3:1149625-1149644 | None:intergenic | 30.0% | |
| TTGCAATTTGTAGACTAATG+TGG | - | chr7.3:1150204-1150223 | MS.gene050628:intron | 30.0% | |
| TTGCGGAAAATATCATAACA+AGG | + | chr7.3:1149926-1149945 | None:intergenic | 30.0% | |
| ! | AATTTTCTCTCTTCACTTCA+TGG | + | chr7.3:1150132-1150151 | None:intergenic | 30.0% |
| ! | ACAGTGTTAGTTTGAAAAGA+AGG | + | chr7.3:1149089-1149108 | None:intergenic | 30.0% |
| ! | CTCTTTTTAATATTCCCAGA+AGG | - | chr7.3:1151901-1151920 | MS.gene050628:intron | 30.0% |
| ! | GTATGATGTCTATGTTCTTT+TGG | - | chr7.3:1150684-1150703 | MS.gene050628:intron | 30.0% |
| ! | TGATATTTTCCGCAACTTTA+TGG | - | chr7.3:1149931-1149950 | MS.gene050628:intron | 30.0% |
| ! | TTCGTTTTCGTCCTTAAAAT+CGG | - | chr7.3:1151226-1151245 | MS.gene050628:intron | 30.0% |
| !! | AGATATTCTGCTTTAGGATA+TGG | - | chr7.3:1151329-1151348 | MS.gene050628:intron | 30.0% |
| !! | CTACATGTTCCCTTTTATTT+AGG | + | chr7.3:1149558-1149577 | None:intergenic | 30.0% |
| !! | CTATTAATTTGTATCGCAGT+TGG | + | chr7.3:1149364-1149383 | None:intergenic | 30.0% |
| !! | TTGGGTTTTTCACTTTTCTT+GGG | - | chr7.3:1152098-1152117 | MS.gene050628:intron | 30.0% |
| !! | TTTGGGTTTTTCACTTTTCT+TGG | - | chr7.3:1152097-1152116 | MS.gene050628:intron | 30.0% |
| !! | TTTTGGAGATATTCTGCTTT+AGG | - | chr7.3:1151323-1151342 | MS.gene050628:intron | 30.0% |
| !!! | CAAACTTGTTTTAACTCAGA+AGG | + | chr7.3:1150645-1150664 | None:intergenic | 30.0% |
| ACTCTACAAAGTTATACGTC+AGG | - | chr7.3:1149249-1149268 | MS.gene050628:intron | 35.0% | |
| AGAAGATTGTCTCCTCTATT+AGG | + | chr7.3:1149296-1149315 | None:intergenic | 35.0% | |
| AGAATTGGATTGATTGAGGA+AGG | + | chr7.3:1148978-1148997 | None:intergenic | 35.0% | |
| AGTGAAGAGAGAAAATTGAC+TGG | - | chr7.3:1150135-1150154 | MS.gene050628:CDS | 35.0% | |
| AGTGTAATCATGTGATGACT+GGG | - | chr7.3:1151826-1151845 | MS.gene050628:CDS | 35.0% | |
| ATGCACAGCTAAACTTTCAT+AGG | - | chr7.3:1151576-1151595 | MS.gene050628:intron | 35.0% | |
| ATTGATTGAGGAAGGTAGAA+AGG | + | chr7.3:1148970-1148989 | None:intergenic | 35.0% | |
| CAACATTGCTTGAAATTTGG+AGG | - | chr7.3:1151957-1151976 | MS.gene050628:intron | 35.0% | |
| CAGAAAAGATAGCTTACACT+TGG | + | chr7.3:1149752-1149771 | None:intergenic | 35.0% | |
| CAGCTAAACTTTCATAGGTA+TGG | - | chr7.3:1151581-1151600 | MS.gene050628:intron | 35.0% | |
| CCCTAAGTTTATAGGAGATA+TGG | - | chr7.3:1149426-1149445 | MS.gene050628:intron | 35.0% | |
| CTGTAGCACCCTAAATAAAA+GGG | - | chr7.3:1149546-1149565 | MS.gene050628:intron | 35.0% | |
| GTACTACACCTGCATATAAA+GGG | - | chr7.3:1149215-1149234 | MS.gene050628:intron | 35.0% | |
| GTTGGATCTATTTGCAGATA+AGG | - | chr7.3:1150918-1150937 | MS.gene050628:intron | 35.0% | |
| GTTGTCAAACAACCTAATAG+AGG | - | chr7.3:1149281-1149300 | MS.gene050628:intron | 35.0% | |
| TACTCTAAATGCCTAAGAAC+GGG | + | chr7.3:1150490-1150509 | None:intergenic | 35.0% | |
| TAGTGTAATCATGTGATGAC+TGG | - | chr7.3:1151825-1151844 | MS.gene050628:intron | 35.0% | |
| TATACTCCTCCATAAAGTTG+CGG | + | chr7.3:1149943-1149962 | None:intergenic | 35.0% | |
| TCTTAGTGCATGTATTGAGT+TGG | - | chr7.3:1150900-1150919 | MS.gene050628:intron | 35.0% | |
| TGTACTACACCTGCATATAA+AGG | - | chr7.3:1149214-1149233 | MS.gene050628:intron | 35.0% | |
| TTACTATTAAGAGGGTTCAC+AGG | - | chr7.3:1149657-1149676 | MS.gene050628:intron | 35.0% | |
| TTGATTGAGGAAGGTAGAAA+GGG | + | chr7.3:1148969-1148988 | None:intergenic | 35.0% | |
| TTGTTAAACTGTTGTAGGCT+TGG | - | chr7.3:1151743-1151762 | MS.gene050628:intron | 35.0% | |
| ! | ATAGACTTTGGACTGACTTT+GGG | - | chr7.3:1152080-1152099 | MS.gene050628:intron | 35.0% |
| ! | ATTATATTTGACTTCTGGGC+AGG | + | chr7.3:1151146-1151165 | None:intergenic | 35.0% |
| ! | GGAACATAAGGCGTTAAATT+TGG | + | chr7.3:1149980-1149999 | None:intergenic | 35.0% |
| ! | TAGGCATTTAGAGTAACACA+AGG | - | chr7.3:1150495-1150514 | MS.gene050628:intron | 35.0% |
| ! | TATTTTCCGCAACTTTATGG+AGG | - | chr7.3:1149934-1149953 | MS.gene050628:intron | 35.0% |
| !! | AATAAAATCTTACCGGCTCA+AGG | + | chr7.3:1150833-1150852 | None:intergenic | 35.0% |
| !! | ATAAAATCTTACCGGCTCAA+GGG | + | chr7.3:1150832-1150851 | None:intergenic | 35.0% |
| !! | GACAATCTTCTAGAATGTAC+TGG | - | chr7.3:1149305-1149324 | MS.gene050628:intron | 35.0% |
| !! | TTTTCACTTTTCTTGGGACA+GGG | - | chr7.3:1152104-1152123 | MS.gene050628:intron | 35.0% |
| !! | TTTTTCACTTTTCTTGGGAC+AGG | - | chr7.3:1152103-1152122 | MS.gene050628:intron | 35.0% |
| !!! | TTTCATGTGTGTTGCTTTTG+AGG | - | chr7.3:1149783-1149802 | MS.gene050628:intron | 35.0% |
| AAGATAGCTTACACTTGGCA+TGG | + | chr7.3:1149747-1149766 | None:intergenic | 40.0% | |
| AGAATACTTGTTCCCTTGTC+TGG | + | chr7.3:1150567-1150586 | None:intergenic | 40.0% | |
| AGGAAGGATTTACCAGATTG+TGG | - | chr7.3:1149693-1149712 | MS.gene050628:intron | 40.0% | |
| AGGAGTGAATTTATGCAGGA+AGG | - | chr7.3:1149677-1149696 | MS.gene050628:intron | 40.0% | |
| AGTAATGTCTTCCATACACC+TGG | + | chr7.3:1150531-1150550 | None:intergenic | 40.0% | |
| ATACAGTCTACTGATGGTCT+GGG | - | chr7.3:1149866-1149885 | MS.gene050628:intron | 40.0% | |
| ATTCGTCCATCTTAGAGAGA+AGG | - | chr7.3:1149385-1149404 | MS.gene050628:intron | 40.0% | |
| CCACAGCGTTGTATTAGTAT+AGG | + | chr7.3:1150385-1150404 | None:intergenic | 40.0% | |
| CCTATACTAATACAACGCTG+TGG | - | chr7.3:1150382-1150401 | MS.gene050628:intron | 40.0% | |
| CCTGCTACTAATGGAACATA+AGG | + | chr7.3:1149992-1150011 | None:intergenic | 40.0% | |
| CCTTATGTTCCATTAGTAGC+AGG | - | chr7.3:1149989-1150008 | MS.gene050628:intron | 40.0% | |
| GAATACTTGTTCCCTTGTCT+GGG | + | chr7.3:1150566-1150585 | None:intergenic | 40.0% | |
| GCTGTAGCACCCTAAATAAA+AGG | - | chr7.3:1149545-1149564 | MS.gene050628:intron | 40.0% | |
| GGAAATTTGACTCTTGTCAG+TGG | + | chr7.3:1151195-1151214 | None:intergenic | 40.0% | |
| GGATTTAGGGGGTTATTTAC+CGG | - | chr7.3:1152132-1152151 | MS.gene050628:intron | 40.0% | |
| GGGTTTACCCCTAAGTTTAT+AGG | - | chr7.3:1149418-1149437 | MS.gene050628:intron | 40.0% | |
| GGTGTATGGAAGACATTACT+TGG | - | chr7.3:1150531-1150550 | MS.gene050628:CDS | 40.0% | |
| GTCATCTTTAATGCCCTTTC+AGG | + | chr7.3:1151929-1151948 | None:intergenic | 40.0% | |
| GTGTGTGTGTGTGTGTATAA+AGG | + | chr7.3:1150329-1150348 | None:intergenic | 40.0% | |
| GTGTTTCCTGTCAAATAGGT+TGG | - | chr7.3:1149890-1149909 | MS.gene050628:intron | 40.0% | |
| GTTATCCTGTAGAACTTGCA+AGG | - | chr7.3:1150044-1150063 | MS.gene050628:CDS | 40.0% | |
| TATACAGTCTACTGATGGTC+TGG | - | chr7.3:1149865-1149884 | MS.gene050628:intron | 40.0% | |
| TCACAGGAGTGAATTTATGC+AGG | - | chr7.3:1149673-1149692 | MS.gene050628:intron | 40.0% | |
| TCTATCGTCCCTTTATATGC+AGG | + | chr7.3:1149226-1149245 | None:intergenic | 40.0% | |
| TGCAAGTTCTACAGGATAAC+AGG | + | chr7.3:1150044-1150063 | None:intergenic | 40.0% | |
| TTCCATACTCTGCAATTTGC+TGG | - | chr7.3:1150802-1150821 | MS.gene050628:intron | 40.0% | |
| TTCGTCCATCTTAGAGAGAA+GGG | - | chr7.3:1149386-1149405 | MS.gene050628:intron | 40.0% | |
| ! | ACATGTTTTCTCCCGTTCTT+AGG | - | chr7.3:1150476-1150495 | MS.gene050628:intron | 40.0% |
| ! | CACAAATGCTAGTTTGGCAT+TGG | - | chr7.3:1149721-1149740 | MS.gene050628:intron | 40.0% |
| ! | CATAGACTTTGGACTGACTT+TGG | - | chr7.3:1152079-1152098 | MS.gene050628:intron | 40.0% |
| ! | GGGCATTGTTAAACTGTTGT+AGG | - | chr7.3:1151738-1151757 | MS.gene050628:intron | 40.0% |
| ! | GTTTTCGTCCTTAAAATCGG+TGG | - | chr7.3:1151229-1151248 | MS.gene050628:intron | 40.0% |
| !! | GCTAGGAGCACAATTTTCTA+GGG | - | chr7.3:1151848-1151867 | MS.gene050628:CDS | 40.0% |
| !! | TCTGCTTTAGGATATGGCAT+TGG | - | chr7.3:1151335-1151354 | MS.gene050628:intron | 40.0% |
| !!! | TCTTAGCTCCACCGATTTTA+AGG | + | chr7.3:1151240-1151259 | None:intergenic | 40.0% |
| !!! | TTTTCTGCTGGTTTTGTAGC+AGG | - | chr7.3:1151001-1151020 | MS.gene050628:intron | 40.0% |
| AAAAACCCGACGACAGATAG+AGG | - | chr7.3:1151063-1151082 | MS.gene050628:CDS | 45.0% | |
| AATCATGTGATGACTGGGCT+AGG | - | chr7.3:1151831-1151850 | MS.gene050628:CDS | 45.0% | |
| AATGTCTTCCATACACCTGG+AGG | + | chr7.3:1150528-1150547 | None:intergenic | 45.0% | |
| ATTCCCAGAAGGATCCTGAA+AGG | - | chr7.3:1151912-1151931 | MS.gene050628:intron | 45.0% | |
| ATTTGTGCCTCTCCACAATC+TGG | + | chr7.3:1149708-1149727 | None:intergenic | 45.0% | |
| CAGCAGAAAAATTAGCCCCA+AGG | + | chr7.3:1150991-1151010 | None:intergenic | 45.0% | |
| CTCTAACCTCTATCTGTCGT+CGG | + | chr7.3:1151072-1151091 | None:intergenic | 45.0% | |
| GACCAGCAAATTGCAGAGTA+TGG | + | chr7.3:1150807-1150826 | None:intergenic | 45.0% | |
| GAGACAACTATGCCAACAGA+TGG | + | chr7.3:1152186-1152205 | None:intergenic | 45.0% | |
| GCAAGTGATCCTGCTACTAA+TGG | + | chr7.3:1150001-1150020 | None:intergenic | 45.0% | |
| GCTTGGAGCACAACTTTCTA+GGG | - | chr7.3:1150776-1150795 | MS.gene050628:intron | 45.0% | |
| GGATTTACCAGATTGTGGAG+AGG | - | chr7.3:1149698-1149717 | MS.gene050628:intron | 45.0% | |
| GGGTGTGTTTCCTGTCAAAT+AGG | - | chr7.3:1149886-1149905 | MS.gene050628:intron | 45.0% | |
| TCGTCCATCTTAGAGAGAAG+GGG | - | chr7.3:1149387-1149406 | MS.gene050628:intron | 45.0% | |
| TCTAACCTCTATCTGTCGTC+GGG | + | chr7.3:1151071-1151090 | None:intergenic | 45.0% | |
| TGGGCTAATATGGACCTGTT+TGG | - | chr7.3:1149492-1149511 | MS.gene050628:intron | 45.0% | |
| TTCCCAGAAGGATCCTGAAA+GGG | - | chr7.3:1151913-1151932 | MS.gene050628:intron | 45.0% | |
| TTGAGGAAGGTAGAAAGGGT+AGG | + | chr7.3:1148965-1148984 | None:intergenic | 45.0% | |
| ! | CTTGGGGCTAATTTTTCTGC+TGG | - | chr7.3:1150989-1151008 | MS.gene050628:intron | 45.0% |
| ! | GAGAGGCACAAATGCTAGTT+TGG | - | chr7.3:1149715-1149734 | MS.gene050628:intron | 45.0% |
| ! | GTCGTTTAGGGCATAGACTT+TGG | - | chr7.3:1152068-1152087 | MS.gene050628:intron | 45.0% |
| ! | TAGTACACAGGTACCGTTTC+TGG | - | chr7.3:1150745-1150764 | MS.gene050628:intron | 45.0% |
| !! | GGCTAGGAGCACAATTTTCT+AGG | - | chr7.3:1151847-1151866 | MS.gene050628:CDS | 45.0% |
| ACAGGGATGGAGGATTTAGG+GGG | - | chr7.3:1152121-1152140 | MS.gene050628:intron | 50.0% | |
| AGACTTCAATCGCAAGCTGC+TGG | - | chr7.3:1149032-1149051 | MS.gene050628:intron | 50.0% | |
| AGGATCACTTGCACGCTCAT+TGG | - | chr7.3:1150009-1150028 | MS.gene050628:intron | 50.0% | |
| ATGCCCTTTCAGGATCCTTC+TGG | + | chr7.3:1151919-1151938 | None:intergenic | 50.0% | |
| CACGATGGTTAATTGCGCGT+CGG | + | chr7.3:1148867-1148886 | None:intergenic | 50.0% | |
| CGAGTCCTTGCAAGTTCTAC+AGG | + | chr7.3:1150052-1150071 | None:intergenic | 50.0% | |
| CGTCCATCTTAGAGAGAAGG+GGG | - | chr7.3:1149388-1149407 | MS.gene050628:intron | 50.0% | |
| GACAGGGATGGAGGATTTAG+GGG | - | chr7.3:1152120-1152139 | MS.gene050628:intron | 50.0% | |
| GGACAGGGATGGAGGATTTA+GGG | - | chr7.3:1152119-1152138 | MS.gene050628:intron | 50.0% | |
| GGAGTCATCAACCCAGACAA+GGG | - | chr7.3:1150552-1150571 | MS.gene050628:CDS | 50.0% | |
| GGCTTGGAGCACAACTTTCT+AGG | - | chr7.3:1150775-1150794 | MS.gene050628:intron | 50.0% | |
| GGTAGAAAGGGTAGGTACCT+TGG | + | chr7.3:1148957-1148976 | None:intergenic | 50.0% | |
| GGTTAATTGCGCGTCGGAAT+TGG | + | chr7.3:1148861-1148880 | None:intergenic | 50.0% | |
| TGACTTCTGGGCAGGAAGTA+AGG | + | chr7.3:1151138-1151157 | None:intergenic | 50.0% | |
| TGCACACTGCCAACACAGTT+AGG | - | chr7.3:1151381-1151400 | MS.gene050628:CDS | 50.0% | |
| TGCCCTTTCAGGATCCTTCT+GGG | + | chr7.3:1151918-1151937 | None:intergenic | 50.0% | |
| TGGAGTCATCAACCCAGACA+AGG | - | chr7.3:1150551-1150570 | MS.gene050628:CDS | 50.0% | |
| ! | ACTCCCCCTTCTCTCTAAGA+TGG | + | chr7.3:1149394-1149413 | None:intergenic | 50.0% |
| ! | CACTTTTCTTGGGACAGGGA+TGG | - | chr7.3:1152108-1152127 | MS.gene050628:intron | 50.0% |
| ! | TACACAGGTACCGTTTCTGG+TGG | - | chr7.3:1150748-1150767 | MS.gene050628:intron | 50.0% |
| ! | TTTTCTTGGGACAGGGATGG+AGG | - | chr7.3:1152111-1152130 | MS.gene050628:intron | 50.0% |
| !! | AGAGAGAAGGGGGAGTATCA+GGG | - | chr7.3:1149398-1149417 | MS.gene050628:intron | 50.0% |
| !! | GTCGAGTGGATTGACGATGA+CGG | + | chr7.3:1148930-1148949 | None:intergenic | 50.0% |
| !! | TAGAGAGAAGGGGGAGTATC+AGG | - | chr7.3:1149397-1149416 | MS.gene050628:intron | 50.0% |
| AAGTGCCACAGCTGTCCTTG+GGG | - | chr7.3:1150973-1150992 | MS.gene050628:intron | 55.0% | |
| ACACAAGGCGACAAACCTCC+AGG | - | chr7.3:1150510-1150529 | MS.gene050628:CDS | 55.0% | |
| ACTTGCAAGGACTCGCATGC+AGG | - | chr7.3:1150057-1150076 | MS.gene050628:CDS | 55.0% | |
| ATGGACCAGCACGACCTACA+CGG | + | chr7.3:1152167-1152186 | None:intergenic | 55.0% | |
| ATTAGCCCCAAGGACAGCTG+TGG | + | chr7.3:1150981-1151000 | None:intergenic | 55.0% | |
| CAAGCCCAGTCCACCAGAAA+CGG | + | chr7.3:1150761-1150780 | None:intergenic | 55.0% | |
| CAAGTGCCACAGCTGTCCTT+GGG | - | chr7.3:1150972-1150991 | MS.gene050628:intron | 55.0% | |
| CGACGCGCAATTAACCATCG+TGG | - | chr7.3:1148865-1148884 | MS.gene050628:CDS | 55.0% | |
| GCGACAAACCTCCAGGTGTA+TGG | - | chr7.3:1150517-1150536 | MS.gene050628:CDS | 55.0% | |
| GGATAAAGCGCGTTCCACGA+TGG | + | chr7.3:1148882-1148901 | None:intergenic | 55.0% | |
| GGGACAGGGATGGAGGATTT+AGG | - | chr7.3:1152118-1152137 | MS.gene050628:intron | 55.0% | |
| TTGCTGGTCAACCCTTGAGC+CGG | - | chr7.3:1150818-1150837 | MS.gene050628:intron | 55.0% | |
| ! | GATGACGGCGGAGATGAAAG+CGG | + | chr7.3:1148915-1148934 | None:intergenic | 55.0% |
| !! | AGGTACCGTTTCTGGTGGAC+TGG | - | chr7.3:1150753-1150772 | MS.gene050628:intron | 55.0% |
| !! | GAGTGGATTGACGATGACGG+CGG | + | chr7.3:1148927-1148946 | None:intergenic | 55.0% |
| !! | GGTACCGTTTCTGGTGGACT+GGG | - | chr7.3:1150754-1150773 | MS.gene050628:intron | 55.0% |
| ACCTACACGGGGAGCAATGC+CGG | + | chr7.3:1152154-1152173 | None:intergenic | 60.0% | |
| CAATCCACTCGACGTCGCCA+AGG | - | chr7.3:1148937-1148956 | MS.gene050628:CDS | 60.0% | |
| GCAAGTGCCACAGCTGTCCT+TGG | - | chr7.3:1150971-1150990 | MS.gene050628:intron | 60.0% | |
| TGGACCAGCACGACCTACAC+GGG | + | chr7.3:1152166-1152185 | None:intergenic | 60.0% | |
| ! | CGGGTTTTTGCCACGTCCAG+CGG | + | chr7.3:1151052-1151071 | None:intergenic | 60.0% |
| ! | GGTCGTGCTGGTCCATCTGT+TGG | - | chr7.3:1152171-1152190 | MS.gene050628:CDS | 60.0% |
| !! | CGTTTCTGGTGGACTGGGCT+TGG | - | chr7.3:1150759-1150778 | MS.gene050628:intron | 60.0% |
| ACCGGCATTGCTCCCCGTGT+AGG | - | chr7.3:1152150-1152169 | MS.gene050628:CDS | 65.0% | |
| ATCAGCTGCCACGTGTCCGC+TGG | - | chr7.3:1151033-1151052 | MS.gene050628:CDS | 65.0% | |
| GAACGCGCTTTATCCGCCGC+CGG | - | chr7.3:1148887-1148906 | MS.gene050628:CDS | 65.0% | |
| GGACCAGCACGACCTACACG+GGG | + | chr7.3:1152165-1152184 | None:intergenic | 65.0% | |
| GGTACCTTGGCGACGTCGAG+TGG | + | chr7.3:1148944-1148963 | None:intergenic | 65.0% | |
| GCTCCCCGTGTAGGTCGTGC+TGG | - | chr7.3:1152159-1152178 | MS.gene050628:CDS | 70.0% | |
| GGCGGAGATGAAAGCGGCGC+CGG | + | chr7.3:1148909-1148928 | None:intergenic | 70.0% | |
| TGCCACGTCCAGCGGACACG+TGG | + | chr7.3:1151044-1151063 | None:intergenic | 70.0% | |
| TGCCACGTGTCCGCTGGACG+TGG | - | chr7.3:1151039-1151058 | MS.gene050628:CDS | 70.0% | |
| ! | GGAGATGAAAGCGGCGCCGG+CGG | + | chr7.3:1148906-1148925 | None:intergenic | 70.0% |
| !! | GATGAAAGCGGCGCCGGCGG+CGG | + | chr7.3:1148903-1148922 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 1148836 | 1152260 | 1148836 | ID=MS.gene050628 |
| chr7.3 | mRNA | 1148836 | 1152260 | 1148836 | ID=MS.gene050628.t1;Parent=MS.gene050628 |
| chr7.3 | exon | 1152138 | 1152260 | 1152138 | ID=MS.gene050628.t1.exon1;Parent=MS.gene050628.t1 |
| chr7.3 | CDS | 1152138 | 1152260 | 1152138 | ID=cds.MS.gene050628.t1;Parent=MS.gene050628.t1 |
| chr7.3 | exon | 1151990 | 1152067 | 1151990 | ID=MS.gene050628.t1.exon2;Parent=MS.gene050628.t1 |
| chr7.3 | CDS | 1151990 | 1152067 | 1151990 | ID=cds.MS.gene050628.t1;Parent=MS.gene050628.t1 |
| chr7.3 | exon | 1151826 | 1151900 | 1151826 | ID=MS.gene050628.t1.exon3;Parent=MS.gene050628.t1 |
| chr7.3 | CDS | 1151826 | 1151900 | 1151826 | ID=cds.MS.gene050628.t1;Parent=MS.gene050628.t1 |
| chr7.3 | exon | 1151342 | 1151401 | 1151342 | ID=MS.gene050628.t1.exon4;Parent=MS.gene050628.t1 |
| chr7.3 | CDS | 1151342 | 1151401 | 1151342 | ID=cds.MS.gene050628.t1;Parent=MS.gene050628.t1 |
| chr7.3 | exon | 1151018 | 1151188 | 1151018 | ID=MS.gene050628.t1.exon5;Parent=MS.gene050628.t1 |
| chr7.3 | CDS | 1151018 | 1151188 | 1151018 | ID=cds.MS.gene050628.t1;Parent=MS.gene050628.t1 |
| chr7.3 | exon | 1150502 | 1150598 | 1150502 | ID=MS.gene050628.t1.exon6;Parent=MS.gene050628.t1 |
| chr7.3 | CDS | 1150502 | 1150598 | 1150502 | ID=cds.MS.gene050628.t1;Parent=MS.gene050628.t1 |
| chr7.3 | exon | 1150257 | 1150348 | 1150257 | ID=MS.gene050628.t1.exon7;Parent=MS.gene050628.t1 |
| chr7.3 | CDS | 1150257 | 1150348 | 1150257 | ID=cds.MS.gene050628.t1;Parent=MS.gene050628.t1 |
| chr7.3 | exon | 1150012 | 1150161 | 1150012 | ID=MS.gene050628.t1.exon8;Parent=MS.gene050628.t1 |
| chr7.3 | CDS | 1150012 | 1150161 | 1150012 | ID=cds.MS.gene050628.t1;Parent=MS.gene050628.t1 |
| chr7.3 | exon | 1149118 | 1149176 | 1149118 | ID=MS.gene050628.t1.exon9;Parent=MS.gene050628.t1 |
| chr7.3 | CDS | 1149118 | 1149176 | 1149118 | ID=cds.MS.gene050628.t1;Parent=MS.gene050628.t1 |
| chr7.3 | exon | 1148836 | 1148971 | 1148836 | ID=MS.gene050628.t1.exon10;Parent=MS.gene050628.t1 |
| chr7.3 | CDS | 1148836 | 1148971 | 1148836 | ID=cds.MS.gene050628.t1;Parent=MS.gene050628.t1 |
| Gene Sequence |
| Protein sequence |
