Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050698.t1 | XP_003626611.1 | 97.3 | 186 | 5 | 0 | 39 | 224 | 44 | 229 | 5.00E-97 | 364 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050698.t1 | Q9SJ54 | 32.1 | 156 | 106 | 0 | 55 | 210 | 35 | 190 | 7.7e-22 | 105.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050698.t1 | Q2HTB8 | 97.3 | 186 | 5 | 0 | 39 | 224 | 44 | 229 | 3.6e-97 | 364.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050698 | MS.gene22751 | 0.874142 | 8.51E-68 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene050363 | MS.gene050698 | PPI |
| MS.gene050698 | MS.gene025640 | PPI |
| MS.gene007146 | MS.gene050698 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050698.t1 | MTR_7g118270 | 94.323 | 229 | 8 | 1 | 1 | 224 | 1 | 229 | 1.78e-157 | 435 |
| MS.gene050698.t1 | MTR_8g024250 | 60.847 | 189 | 74 | 0 | 35 | 223 | 92 | 280 | 7.28e-74 | 225 |
| MS.gene050698.t1 | MTR_7g106050 | 37.888 | 161 | 98 | 2 | 45 | 204 | 24 | 183 | 5.43e-35 | 124 |
| MS.gene050698.t1 | MTR_3g092790 | 36.538 | 156 | 93 | 2 | 64 | 219 | 49 | 198 | 6.98e-29 | 108 |
| MS.gene050698.t1 | MTR_2g086790 | 32.584 | 178 | 106 | 4 | 39 | 204 | 18 | 193 | 1.46e-24 | 97.1 |
| MS.gene050698.t1 | MTR_1g057420 | 33.103 | 145 | 97 | 0 | 60 | 204 | 39 | 183 | 1.52e-24 | 96.7 |
| MS.gene050698.t1 | MTR_2g011350 | 29.570 | 186 | 127 | 3 | 24 | 207 | 7 | 190 | 6.01e-22 | 89.7 |
| MS.gene050698.t1 | MTR_4g051880 | 33.566 | 143 | 87 | 1 | 64 | 198 | 44 | 186 | 6.16e-20 | 84.7 |
| MS.gene050698.t1 | MTR_2g087080 | 30.814 | 172 | 111 | 5 | 20 | 185 | 5 | 174 | 2.71e-16 | 75.1 |
| MS.gene050698.t1 | MTR_4g119428 | 30.573 | 157 | 105 | 3 | 51 | 205 | 65 | 219 | 1.79e-15 | 73.2 |
| MS.gene050698.t1 | MTR_1g057270 | 30.464 | 151 | 101 | 3 | 57 | 205 | 73 | 221 | 3.33e-15 | 72.8 |
| MS.gene050698.t1 | MTR_2g100060 | 27.108 | 166 | 112 | 3 | 53 | 217 | 77 | 234 | 3.69e-12 | 64.3 |
| MS.gene050698.t1 | MTR_2g087000 | 25.641 | 156 | 114 | 2 | 33 | 188 | 42 | 195 | 9.26e-12 | 62.8 |
| MS.gene050698.t1 | MTR_5g087760 | 23.353 | 167 | 123 | 4 | 41 | 203 | 70 | 235 | 1.28e-11 | 62.8 |
| MS.gene050698.t1 | MTR_1g105570 | 23.958 | 192 | 136 | 3 | 12 | 200 | 25 | 209 | 9.08e-11 | 60.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050698.t1 | AT4G01410 | 53.226 | 186 | 87 | 0 | 39 | 224 | 42 | 227 | 2.19e-66 | 204 |
| MS.gene050698.t1 | AT3G52470 | 32.370 | 173 | 115 | 2 | 39 | 210 | 17 | 188 | 1.96e-32 | 117 |
| MS.gene050698.t1 | AT2G35960 | 32.051 | 156 | 106 | 0 | 55 | 210 | 35 | 190 | 1.54e-29 | 109 |
| MS.gene050698.t1 | AT3G44220 | 33.149 | 181 | 116 | 3 | 48 | 224 | 27 | 206 | 1.47e-28 | 107 |
| MS.gene050698.t1 | AT4G09590 | 30.488 | 164 | 112 | 2 | 48 | 210 | 29 | 191 | 3.69e-28 | 106 |
| MS.gene050698.t1 | AT3G11660 | 34.132 | 167 | 106 | 3 | 49 | 212 | 26 | 191 | 4.35e-28 | 105 |
| MS.gene050698.t1 | AT2G35970 | 31.098 | 164 | 111 | 2 | 48 | 210 | 29 | 191 | 1.78e-27 | 104 |
| MS.gene050698.t1 | AT5G53730 | 33.962 | 159 | 98 | 4 | 49 | 204 | 38 | 192 | 6.12e-27 | 103 |
| MS.gene050698.t1 | AT5G22200 | 33.136 | 169 | 108 | 3 | 60 | 224 | 43 | 210 | 1.97e-26 | 101 |
| MS.gene050698.t1 | AT5G06330 | 34.395 | 157 | 97 | 4 | 60 | 212 | 39 | 193 | 6.50e-26 | 100 |
| MS.gene050698.t1 | AT5G22870 | 30.120 | 166 | 112 | 3 | 44 | 206 | 30 | 194 | 3.68e-19 | 82.4 |
| MS.gene050698.t1 | AT4G05220 | 26.786 | 168 | 120 | 3 | 42 | 209 | 48 | 212 | 1.17e-18 | 81.6 |
| MS.gene050698.t1 | AT2G35980 | 28.834 | 163 | 113 | 3 | 41 | 201 | 41 | 202 | 3.83e-16 | 74.7 |
| MS.gene050698.t1 | AT1G61760 | 23.232 | 198 | 148 | 3 | 5 | 202 | 11 | 204 | 4.62e-14 | 68.9 |
| MS.gene050698.t1 | AT2G27080 | 22.111 | 199 | 149 | 3 | 11 | 203 | 42 | 240 | 1.36e-13 | 68.6 |
| MS.gene050698.t1 | AT2G27080 | 22.111 | 199 | 149 | 3 | 11 | 203 | 42 | 240 | 1.36e-13 | 68.6 |
| MS.gene050698.t1 | AT3G11650 | 30.263 | 152 | 106 | 0 | 50 | 201 | 64 | 215 | 2.70e-13 | 67.4 |
| MS.gene050698.t1 | AT5G06320 | 26.667 | 165 | 119 | 2 | 41 | 204 | 49 | 212 | 6.38e-12 | 63.2 |
| MS.gene050698.t1 | AT3G52460 | 30.159 | 126 | 87 | 1 | 24 | 149 | 92 | 216 | 4.73e-11 | 61.6 |
Find 74 sgRNAs with CRISPR-Local
Find 82 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGGAGATGGTGTTGTTGGTT+TGG | 0.257389 | 7.4:+411400 | None:intergenic |
| AGTGCACATTATGGCTTCTA+TGG | 0.310139 | 7.4:-410869 | MS.gene050698:CDS |
| GGTTTGAAACTTGTGTTTCT+TGG | 0.338420 | 7.4:-410923 | MS.gene050698:CDS |
| TTGTTCATTTGTAGTTTGTC+AGG | 0.341103 | 7.4:+411376 | None:intergenic |
| AGATGGTGTTGTTGGTTTGG+AGG | 0.350365 | 7.4:+411403 | None:intergenic |
| GTTGTCGGTGCTGCCATCTA+TGG | 0.361215 | 7.4:-411220 | MS.gene050698:CDS |
| TAAACAGAGACACGCTTGTT+TGG | 0.364464 | 7.4:+411133 | None:intergenic |
| CAACATAACCTGCGGTGTTA+TGG | 0.381942 | 7.4:+411069 | None:intergenic |
| AAACAGAGACACGCTTGTTT+GGG | 0.403133 | 7.4:+411134 | None:intergenic |
| GAGGTTGAGACTGAGAGCTT+TGG | 0.412653 | 7.4:+411422 | None:intergenic |
| ACAATAAGAAGTGCACATTA+TGG | 0.414069 | 7.4:-410878 | MS.gene050698:CDS |
| GAAGAAAGGTGTTGTTGGAC+AGG | 0.422913 | 7.4:-410822 | MS.gene050698:CDS |
| GTTGGACAGGTTCCTCTGCT+TGG | 0.423856 | 7.4:-410809 | MS.gene050698:CDS |
| GTGTCACTCTACTTGTTCTC+TGG | 0.424057 | 7.4:-411276 | MS.gene050698:CDS |
| TTGATGCTGGATGAGGCTTA+TGG | 0.430904 | 7.4:-410953 | MS.gene050698:CDS |
| GAAGAAGAAGGTGGAGCAGC+AGG | 0.436261 | 7.4:+411352 | None:intergenic |
| GTTTCGTTGTCACCCGTGAT+AGG | 0.438013 | 7.4:-411016 | MS.gene050698:CDS |
| CACCGCCGTGCCTCCTATCA+CGG | 0.449253 | 7.4:+411003 | None:intergenic |
| TGTTCATTTGTAGTTTGTCA+GGG | 0.450921 | 7.4:+411377 | None:intergenic |
| AGTTTGAAGAAAGGTGTTGT+TGG | 0.459945 | 7.4:-410827 | MS.gene050698:CDS |
| GATAGGAGGCACGGCGGTGC+CGG | 0.463367 | 7.4:-410999 | MS.gene050698:CDS |
| ACCATCTTTCTCCTACTAAT+CGG | 0.470963 | 7.4:-411298 | MS.gene050698:CDS |
| TGTTATGGCTTGGTTCCTAT+AGG | 0.472587 | 7.4:+411084 | None:intergenic |
| TCCACACAAACCCCACTTCA+CGG | 0.478409 | 7.4:-411242 | MS.gene050698:CDS |
| GGAAGGTTGAGGTGGAAAGC+AGG | 0.479345 | 7.4:-410902 | MS.gene050698:CDS |
| GTAGAGTGACACCGATTAGT+AGG | 0.480110 | 7.4:+411287 | None:intergenic |
| GCTTGTTTGGGTTCTTAATG+AGG | 0.483668 | 7.4:+411146 | None:intergenic |
| TGAAACTTGTGTTTCTTGGA+AGG | 0.491598 | 7.4:-410919 | MS.gene050698:CDS |
| GATGAGGCTTATGGAGTGGT+GGG | 0.497395 | 7.4:-410944 | MS.gene050698:CDS |
| GAATGTGGCAAAAGCACGTC+CGG | 0.497511 | 7.4:+411324 | None:intergenic |
| GTGTCTCTGTTTACTATGAC+AGG | 0.497541 | 7.4:-411123 | MS.gene050698:CDS |
| CACGGCGGTGCCGGTGTCAG+TGG | 0.506185 | 7.4:-410990 | MS.gene050698:CDS |
| GGATGAGGCTTATGGAGTGG+TGG | 0.506636 | 7.4:-410945 | MS.gene050698:CDS |
| TAACCTGCGGTGTTATGGCT+TGG | 0.514717 | 7.4:+411074 | None:intergenic |
| AAACCCCACTTCACGGTTGT+CGG | 0.517422 | 7.4:-411235 | MS.gene050698:CDS |
| TTCATTTGTAGTTTGTCAGG+GGG | 0.517944 | 7.4:+411379 | None:intergenic |
| TTGTGTTTCTTGGAAGGTTG+AGG | 0.518679 | 7.4:-410913 | MS.gene050698:CDS |
| GGCGGAAAGGAGAGGTGGTG+AGG | 0.529043 | 7.4:+411186 | None:intergenic |
| GACGTTGAACTGCAAGGTGG+CGG | 0.539926 | 7.4:+411168 | None:intergenic |
| ACCGCCGTGCCTCCTATCAC+GGG | 0.546771 | 7.4:+411004 | None:intergenic |
| AGCACCGACAACCGTGAAGT+GGG | 0.547830 | 7.4:+411231 | None:intergenic |
| AGTATCGAATGGGTTGATGC+TGG | 0.561668 | 7.4:-410966 | MS.gene050698:CDS |
| GGTTGTGTTGAAGCCATAGA+TGG | 0.563401 | 7.4:+411207 | None:intergenic |
| GAGAAAGATGGTGAGGAATG+TGG | 0.564646 | 7.4:+411309 | None:intergenic |
| TTTCATATGTCTATGTAGCA+AGG | 0.568280 | 7.4:+410779 | None:intergenic |
| CAGCACCGACAACCGTGAAG+TGG | 0.571917 | 7.4:+411230 | None:intergenic |
| GTGTCAGTGGAAGTATCGAA+TGG | 0.575731 | 7.4:-410977 | MS.gene050698:CDS |
| GAAGGTTGAGGTGGAAAGCA+GGG | 0.580693 | 7.4:-410901 | MS.gene050698:CDS |
| GTTCATTTGTAGTTTGTCAG+GGG | 0.581299 | 7.4:+411378 | None:intergenic |
| ACCGATTAGTAGGAGAAAGA+TGG | 0.581384 | 7.4:+411297 | None:intergenic |
| GAATGGGTTGATGCTGGATG+AGG | 0.584550 | 7.4:-410960 | MS.gene050698:CDS |
| GTATTGATCAGTTTGAAGAA+AGG | 0.586844 | 7.4:-410836 | MS.gene050698:CDS |
| TGAAGTGGGGTTTGTGTGGA+CGG | 0.587867 | 7.4:+411245 | None:intergenic |
| TTCGATACTTCCACTGACAC+CGG | 0.587929 | 7.4:+410980 | None:intergenic |
| TCGTTGTCACCCGTGATAGG+AGG | 0.593989 | 7.4:-411013 | MS.gene050698:CDS |
| TGTCAGTGGAAGTATCGAAT+GGG | 0.594065 | 7.4:-410976 | MS.gene050698:CDS |
| ACCGTGAAGTGGGGTTTGTG+TGG | 0.595899 | 7.4:+411241 | None:intergenic |
| CGTCCGGAAGAAGAAGAAGA+AGG | 0.596935 | 7.4:+411340 | None:intergenic |
| TGAACTGCAAGGTGGCGGAA+AGG | 0.610601 | 7.4:+411173 | None:intergenic |
| TGTTTCTTGGAAGGTTGAGG+TGG | 0.612129 | 7.4:-410910 | MS.gene050698:CDS |
| TGCAAGGTGGCGGAAAGGAG+AGG | 0.612911 | 7.4:+411178 | None:intergenic |
| AATGAGGACGTTGAACTGCA+AGG | 0.627017 | 7.4:+411162 | None:intergenic |
| TCATTTGTAGTTTGTCAGGG+GGG | 0.633124 | 7.4:+411380 | None:intergenic |
| GTCACCCGTGATAGGAGGCA+CGG | 0.633334 | 7.4:-411008 | MS.gene050698:CDS |
| GAACCAAGCCATAACACCGC+AGG | 0.637199 | 7.4:-411077 | MS.gene050698:CDS |
| CAAGGTGGAGTACCAAGCAG+AGG | 0.643384 | 7.4:+410797 | None:intergenic |
| GCACCGACAACCGTGAAGTG+GGG | 0.662185 | 7.4:+411232 | None:intergenic |
| TTAGTAGGAGAAAGATGGTG+AGG | 0.663920 | 7.4:+411302 | None:intergenic |
| AAGGTGGCGGAAAGGAGAGG+TGG | 0.684020 | 7.4:+411181 | None:intergenic |
| AGCGGTGGCAACATAACCTG+CGG | 0.687182 | 7.4:+411061 | None:intergenic |
| GCTGGATGAGGCTTATGGAG+TGG | 0.698271 | 7.4:-410948 | MS.gene050698:CDS |
| CATATGTCTATGTAGCAAGG+TGG | 0.704549 | 7.4:+410782 | None:intergenic |
| ACCCGTGATAGGAGGCACGG+CGG | 0.754758 | 7.4:-411005 | MS.gene050698:CDS |
| GAGGACGTTGAACTGCAAGG+TGG | 0.772968 | 7.4:+411165 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | ACAATAAGAAGTGCACATTA+TGG | - | chr7.4:411336-411355 | MS.gene050698:CDS | 30.0% |
| ! | GTATTGATCAGTTTGAAGAA+AGG | - | chr7.4:411378-411397 | MS.gene050698:CDS | 30.0% |
| ! | TGTTCATTTGTAGTTTGTCA+GGG | + | chr7.4:410840-410859 | None:intergenic | 30.0% |
| ! | TTGTTCATTTGTAGTTTGTC+AGG | + | chr7.4:410841-410860 | None:intergenic | 30.0% |
| ACCATCTTTCTCCTACTAAT+CGG | - | chr7.4:410916-410935 | MS.gene050698:CDS | 35.0% | |
| TGAAACTTGTGTTTCTTGGA+AGG | - | chr7.4:411295-411314 | MS.gene050698:CDS | 35.0% | |
| ! | GGTTTGAAACTTGTGTTTCT+TGG | - | chr7.4:411291-411310 | MS.gene050698:CDS | 35.0% |
| ! | GTTCATTTGTAGTTTGTCAG+GGG | + | chr7.4:410839-410858 | None:intergenic | 35.0% |
| ! | TTCATTTGTAGTTTGTCAGG+GGG | + | chr7.4:410838-410857 | None:intergenic | 35.0% |
| !! | AGTTTGAAGAAAGGTGTTGT+TGG | - | chr7.4:411387-411406 | MS.gene050698:CDS | 35.0% |
| AAACAGAGACACGCTTGTTT+GGG | + | chr7.4:411083-411102 | None:intergenic | 40.0% | |
| ACCGATTAGTAGGAGAAAGA+TGG | + | chr7.4:410920-410939 | None:intergenic | 40.0% | |
| AGTGCACATTATGGCTTCTA+TGG | - | chr7.4:411345-411364 | MS.gene050698:CDS | 40.0% | |
| CATATGTCTATGTAGCAAGG+TGG | + | chr7.4:411435-411454 | None:intergenic | 40.0% | |
| GTGTCTCTGTTTACTATGAC+AGG | - | chr7.4:411091-411110 | MS.gene050698:CDS | 40.0% | |
| TAAACAGAGACACGCTTGTT+TGG | + | chr7.4:411084-411103 | None:intergenic | 40.0% | |
| TTAGTAGGAGAAAGATGGTG+AGG | + | chr7.4:410915-410934 | None:intergenic | 40.0% | |
| TTGTGTTTCTTGGAAGGTTG+AGG | - | chr7.4:411301-411320 | MS.gene050698:CDS | 40.0% | |
| ! | GCTTGTTTGGGTTCTTAATG+AGG | + | chr7.4:411071-411090 | None:intergenic | 40.0% |
| ! | TCATTTGTAGTTTGTCAGGG+GGG | + | chr7.4:410837-410856 | None:intergenic | 40.0% |
| !! | TCTCTGCTTTTGTGTCCTAT+AGG | - | chr7.4:411115-411134 | MS.gene050698:CDS | 40.0% |
| !! | TGTCAGTGGAAGTATCGAAT+GGG | - | chr7.4:411238-411257 | MS.gene050698:CDS | 40.0% |
| !! | TGTTATGGCTTGGTTCCTAT+AGG | + | chr7.4:411133-411152 | None:intergenic | 40.0% |
| AATGAGGACGTTGAACTGCA+AGG | + | chr7.4:411055-411074 | None:intergenic | 45.0% | |
| CCACCTTCTTCTTCTTCTTC+CGG | - | chr7.4:410871-410890 | MS.gene050698:CDS | 45.0% | |
| CTGTGCTTCTCCAGAAAAAG+CGG | + | chr7.4:411174-411193 | None:intergenic | 45.0% | |
| GAGAAAGATGGTGAGGAATG+TGG | + | chr7.4:410908-410927 | None:intergenic | 45.0% | |
| GGTTGTGTTGAAGCCATAGA+TGG | + | chr7.4:411010-411029 | None:intergenic | 45.0% | |
| TGTTTCTTGGAAGGTTGAGG+TGG | - | chr7.4:411304-411323 | MS.gene050698:CDS | 45.0% | |
| TTCGATACTTCCACTGACAC+CGG | + | chr7.4:411237-411256 | None:intergenic | 45.0% | |
| TTGATGCTGGATGAGGCTTA+TGG | - | chr7.4:411261-411280 | MS.gene050698:CDS | 45.0% | |
| ! | CAACATAACCTGCGGTGTTA+TGG | + | chr7.4:411148-411167 | None:intergenic | 45.0% |
| ! | GTAGAGTGACACCGATTAGT+AGG | + | chr7.4:410930-410949 | None:intergenic | 45.0% |
| ! | GTGTCACTCTACTTGTTCTC+TGG | - | chr7.4:410938-410957 | MS.gene050698:CDS | 45.0% |
| !! | AGATGGTGTTGTTGGTTTGG+AGG | + | chr7.4:410814-410833 | None:intergenic | 45.0% |
| !! | AGTATCGAATGGGTTGATGC+TGG | - | chr7.4:411248-411267 | MS.gene050698:CDS | 45.0% |
| !! | GAAGAAAGGTGTTGTTGGAC+AGG | - | chr7.4:411392-411411 | MS.gene050698:CDS | 45.0% |
| !! | GTGTCAGTGGAAGTATCGAA+TGG | - | chr7.4:411237-411256 | MS.gene050698:CDS | 45.0% |
| !! | TTTTCTGGAGAAGCACAGTC+AGG | - | chr7.4:411176-411195 | MS.gene050698:CDS | 45.0% |
| !!! | TATGTTGCCACCGCTTTTTC+TGG | - | chr7.4:411161-411180 | MS.gene050698:CDS | 45.0% |
| AAACCCCACTTCACGGTTGT+CGG | - | chr7.4:410979-410998 | MS.gene050698:CDS | 50.0% | |
| CCGGAAGAAGAAGAAGAAGG+TGG | + | chr7.4:410874-410893 | None:intergenic | 50.0% | |
| CGTCCGGAAGAAGAAGAAGA+AGG | + | chr7.4:410877-410896 | None:intergenic | 50.0% | |
| GAAGGTTGAGGTGGAAAGCA+GGG | - | chr7.4:411313-411332 | MS.gene050698:CDS | 50.0% | |
| GAGGTTGAGACTGAGAGCTT+TGG | + | chr7.4:410795-410814 | None:intergenic | 50.0% | |
| GATGAGGCTTATGGAGTGGT+GGG | - | chr7.4:411270-411289 | MS.gene050698:CDS | 50.0% | |
| GTTTCGTTGTCACCCGTGAT+AGG | - | chr7.4:411198-411217 | MS.gene050698:CDS | 50.0% | |
| TCCACACAAACCCCACTTCA+CGG | - | chr7.4:410972-410991 | MS.gene050698:CDS | 50.0% | |
| TGAAGTGGGGTTTGTGTGGA+CGG | + | chr7.4:410972-410991 | None:intergenic | 50.0% | |
| TGCTTCTCCAGAAAAAGCGG+TGG | + | chr7.4:411171-411190 | None:intergenic | 50.0% | |
| ! | GAATGTGGCAAAAGCACGTC+CGG | + | chr7.4:410893-410912 | None:intergenic | 50.0% |
| !! | GAATGGGTTGATGCTGGATG+AGG | - | chr7.4:411254-411273 | MS.gene050698:CDS | 50.0% |
| !! | GGGAGATGGTGTTGTTGGTT+TGG | + | chr7.4:410817-410836 | None:intergenic | 50.0% |
| !! | TAACCTGCGGTGTTATGGCT+TGG | + | chr7.4:411143-411162 | None:intergenic | 50.0% |
| ACCGTGAAGTGGGGTTTGTG+TGG | + | chr7.4:410976-410995 | None:intergenic | 55.0% | |
| AGCGGTGGCAACATAACCTG+CGG | + | chr7.4:411156-411175 | None:intergenic | 55.0% | |
| GAACCAAGCCATAACACCGC+AGG | - | chr7.4:411137-411156 | MS.gene050698:CDS | 55.0% | |
| GAAGAAGAAGGTGGAGCAGC+AGG | + | chr7.4:410865-410884 | None:intergenic | 55.0% | |
| GACGTTGAACTGCAAGGTGG+CGG | + | chr7.4:411049-411068 | None:intergenic | 55.0% | |
| GAGGACGTTGAACTGCAAGG+TGG | + | chr7.4:411052-411071 | None:intergenic | 55.0% | |
| GCTGGATGAGGCTTATGGAG+TGG | - | chr7.4:411266-411285 | MS.gene050698:CDS | 55.0% | |
| GGAAGGTTGAGGTGGAAAGC+AGG | - | chr7.4:411312-411331 | MS.gene050698:CDS | 55.0% | |
| GGATGAGGCTTATGGAGTGG+TGG | - | chr7.4:411269-411288 | MS.gene050698:CDS | 55.0% | |
| GTTGGACAGGTTCCTCTGCT+TGG | - | chr7.4:411405-411424 | MS.gene050698:CDS | 55.0% | |
| TCGTTGTCACCCGTGATAGG+AGG | - | chr7.4:411201-411220 | MS.gene050698:CDS | 55.0% | |
| ! | CAAGGTGGAGTACCAAGCAG+AGG | + | chr7.4:411420-411439 | None:intergenic | 55.0% |
| ! | GTAGTTTGTCAGGGGGGAGA+TGG | + | chr7.4:410831-410850 | None:intergenic | 55.0% |
| !! | AGCACCGACAACCGTGAAGT+GGG | + | chr7.4:410986-411005 | None:intergenic | 55.0% |
| !! | GTTGTCGGTGCTGCCATCTA+TGG | - | chr7.4:410994-411013 | MS.gene050698:CDS | 55.0% |
| !! | TGAACTGCAAGGTGGCGGAA+AGG | + | chr7.4:411044-411063 | None:intergenic | 55.0% |
| GTCACCCGTGATAGGAGGCA+CGG | - | chr7.4:411206-411225 | MS.gene050698:CDS | 60.0% | |
| ! | GCACCGACAACCGTGAAGTG+GGG | + | chr7.4:410985-411004 | None:intergenic | 60.0% |
| !! | AAGGTGGCGGAAAGGAGAGG+TGG | + | chr7.4:411036-411055 | None:intergenic | 60.0% |
| !! | CAGCACCGACAACCGTGAAG+TGG | + | chr7.4:410987-411006 | None:intergenic | 60.0% |
| !! | CAGGGGGGAGATGGTGTTGT+TGG | + | chr7.4:410822-410841 | None:intergenic | 60.0% |
| !! | TGCAAGGTGGCGGAAAGGAG+AGG | + | chr7.4:411039-411058 | None:intergenic | 60.0% |
| ACCGCCGTGCCTCCTATCAC+GGG | + | chr7.4:411213-411232 | None:intergenic | 65.0% | |
| CACCGCCGTGCCTCCTATCA+CGG | + | chr7.4:411214-411233 | None:intergenic | 65.0% | |
| GGCGGAAAGGAGAGGTGGTG+AGG | + | chr7.4:411031-411050 | None:intergenic | 65.0% | |
| ! | ACCCGTGATAGGAGGCACGG+CGG | - | chr7.4:411209-411228 | MS.gene050698:CDS | 65.0% |
| ! | GATAGGAGGCACGGCGGTGC+CGG | - | chr7.4:411215-411234 | MS.gene050698:CDS | 70.0% |
| !! | CACGGCGGTGCCGGTGTCAG+TGG | - | chr7.4:411224-411243 | MS.gene050698:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 410781 | 411455 | 410781 | ID=MS.gene050698 |
| chr7.4 | mRNA | 410781 | 411455 | 410781 | ID=MS.gene050698.t1;Parent=MS.gene050698 |
| chr7.4 | exon | 410781 | 411455 | 410781 | ID=MS.gene050698.t1.exon1;Parent=MS.gene050698.t1 |
| chr7.4 | CDS | 410781 | 411455 | 410781 | ID=cds.MS.gene050698.t1;Parent=MS.gene050698.t1 |
| Gene Sequence |
| Protein sequence |
