Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene050788.t1 | XP_024626946.1 | 97 | 740 | 22 | 0 | 1 | 740 | 1 | 740 | 0.00E+00 | 1444.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene050788.t1 | Q9USQ7 | 35.8 | 578 | 323 | 14 | 1 | 569 | 1 | 539 | 2.6e-82 | 308.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene050788.t1 | G7KWG3 | 96.9 | 740 | 22 | 1 | 1 | 740 | 1 | 739 | 0.0e+00 | 1438.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene050348 | MS.gene050788 | 0.804822 | 1.80E-49 | -1.69E-46 |
MS.gene050788 | MS.gene072586 | 0.971429 | 3.77E-133 | -1.69E-46 |
MS.gene050788 | MS.gene26801 | 0.803676 | 3.11E-49 | -1.69E-46 |
MS.gene050788 | MS.gene32685 | 0.8172 | 3.73E-52 | -1.69E-46 |
MS.gene050788 | MS.gene38992 | 0.805818 | 1.11E-49 | -1.69E-46 |
MS.gene050788 | MS.gene68611 | 0.807509 | 4.88E-50 | -1.69E-46 |
MS.gene050788 | MS.gene80202 | 0.804362 | 2.24E-49 | -1.69E-46 |
MS.gene050788 | MS.gene88592 | 0.808102 | 3.65E-50 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene050788.t1 | MTR_7g111650 | 96.892 | 740 | 22 | 1 | 1 | 740 | 1 | 739 | 0.0 | 1478 |
MS.gene050788.t1 | MTR_7g111650 | 95.405 | 740 | 22 | 2 | 1 | 740 | 1 | 728 | 0.0 | 1451 |
MS.gene050788.t1 | MTR_7g111650 | 96.341 | 574 | 20 | 1 | 167 | 740 | 1 | 573 | 0.0 | 1142 |
MS.gene050788.t1 | MTR_7g086410 | 72.000 | 50 | 13 | 1 | 672 | 720 | 83 | 132 | 2.53e-15 | 74.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene050788.t1 | AT3G04480 | 58.824 | 748 | 268 | 8 | 1 | 739 | 1 | 717 | 0.0 | 864 |
Find 156 sgRNAs with CRISPR-Local
Find 338 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGAGATTTCTATGCAGAATT+TGG | 0.077906 | 7.4:+4715509 | MS.gene050788:CDS |
GTTCAAAGACATCATGTTAT+TGG | 0.176771 | 7.4:+4717876 | MS.gene050788:CDS |
CAACTAGCAGCGTTTGATTT+TGG | 0.194281 | 7.4:+4715837 | MS.gene050788:CDS |
TGCAAATAATAAAGGTAAAA+AGG | 0.214470 | 7.4:+4716043 | MS.gene050788:CDS |
TTCAAAGACATCATGTTATT+GGG | 0.232969 | 7.4:+4717877 | MS.gene050788:CDS |
AACTGCTCCATTCGTGATTT+AGG | 0.239376 | 7.4:-4718061 | None:intergenic |
AACAAGGACATAAAGGAATA+TGG | 0.243697 | 7.4:-4717210 | None:intergenic |
ATCTTGAGCTTGGTTATAAA+AGG | 0.259616 | 7.4:+4713702 | MS.gene050788:CDS |
ACTTCACATGGCTGGTCAAC+TGG | 0.264296 | 7.4:+4716932 | MS.gene050788:CDS |
TTGTTTCTTTGGCGTACTTA+TGG | 0.266450 | 7.4:+4713870 | MS.gene050788:CDS |
TATAATGGCACATAGCTTTC+CGG | 0.268584 | 7.4:-4717951 | None:intergenic |
TCTTTACCCAAGTGCTTTGC+AGG | 0.282813 | 7.4:-4714851 | None:intergenic |
TTCAACATAGTTCCTGTTAC+AGG | 0.283682 | 7.4:+4718713 | MS.gene050788:CDS |
TAGAGCATATGTTGAAGTTT+TGG | 0.286575 | 7.4:+4716019 | MS.gene050788:CDS |
ACTGACATTTGAAGGCTTAC+TGG | 0.289935 | 7.4:-4718605 | None:intergenic |
GAGGTTAGGTCTTGTTTCTT+TGG | 0.294199 | 7.4:+4713859 | MS.gene050788:CDS |
TTTCTTTATAGCAGATTTGC+AGG | 0.320922 | 7.4:+4715779 | MS.gene050788:intron |
TCTGTTACTGCTGTGTGTTC+TGG | 0.321993 | 7.4:+4713788 | MS.gene050788:CDS |
AATGAAGATAGCTGAATTAC+AGG | 0.323338 | 7.4:+4717160 | MS.gene050788:CDS |
CTCATGTCATGCAGAGTTTG+AGG | 0.332427 | 7.4:+4718573 | MS.gene050788:intron |
CTTTGCCTGGGAAGATATAA+TGG | 0.342710 | 7.4:+4718132 | MS.gene050788:CDS |
CATCAAATATGCTGAATGTA+TGG | 0.345363 | 7.4:+4713637 | MS.gene050788:CDS |
TGTAGTGACCTGCGAATTAC+TGG | 0.346328 | 7.4:+4718766 | MS.gene050788:CDS |
CAAGGTAGCTGCCATGGGTT+TGG | 0.353464 | 7.4:+4714826 | MS.gene050788:intron |
GCAGGTCACTACATCATCTA+TGG | 0.353750 | 7.4:-4718756 | None:intergenic |
TTATGTTCTACGACATCAAT+TGG | 0.356178 | 7.4:-4715603 | None:intergenic |
ATTGTCAATCACAAGTGTTC+TGG | 0.360796 | 7.4:+4717973 | MS.gene050788:CDS |
GAGATTTCTATGCAGAATTT+GGG | 0.361430 | 7.4:+4715510 | MS.gene050788:CDS |
CTTCGAGATGGTACGCCAAA+TGG | 0.371534 | 7.4:-4715960 | None:intergenic |
TGGAGGCCCTGGGGTTGAAC+TGG | 0.371864 | 7.4:+4716986 | MS.gene050788:CDS |
GAAAGTGTTTGTTCGAGGTT+AGG | 0.378559 | 7.4:+4713845 | MS.gene050788:CDS |
GTATGGGATTGCCATTGTTC+AGG | 0.384335 | 7.4:+4713654 | MS.gene050788:CDS |
ACTTGTGATTGACAATATAA+TGG | 0.390583 | 7.4:-4717966 | None:intergenic |
TAATAGATAACGACTTTGCC+TGG | 0.391497 | 7.4:+4718119 | MS.gene050788:CDS |
ATCTTTGCAGTGGAGGCCCT+GGG | 0.393414 | 7.4:+4716976 | MS.gene050788:CDS |
TTTCAGAAATGTGTGATTCC+CGG | 0.397759 | 7.4:+4717932 | MS.gene050788:CDS |
ATAATGGCACATAGCTTTCC+GGG | 0.398283 | 7.4:-4717950 | None:intergenic |
AACCGCCCAGCACCTGTAAC+AGG | 0.403060 | 7.4:-4718725 | None:intergenic |
CCCTGGGGTTGAACTGGAAC+AGG | 0.404068 | 7.4:+4716992 | MS.gene050788:CDS |
CTGACATTTGAAGGCTTACT+GGG | 0.405556 | 7.4:-4718604 | None:intergenic |
ATCCTTGCTCCTCAATGAAA+TGG | 0.408402 | 7.4:+4713904 | MS.gene050788:CDS |
AGTTGGGCACCTAGCTGCAT+TGG | 0.410595 | 7.4:+4716089 | MS.gene050788:CDS |
ACACATTCTCCATGTGTTGC+TGG | 0.414372 | 7.4:+4715655 | MS.gene050788:CDS |
GTTGGGCACCTAGCTGCATT+GGG | 0.421020 | 7.4:+4716090 | MS.gene050788:CDS |
ATAGTTCCTGTTACAGGTGC+TGG | 0.423020 | 7.4:+4718719 | MS.gene050788:CDS |
TTGTTCCTGATCTACCAAAA+AGG | 0.423514 | 7.4:+4717228 | MS.gene050788:CDS |
GCCTGTTCCAGTTCAACCCC+AGG | 0.425806 | 7.4:-4716993 | None:intergenic |
TCAGCTCCACTGACATTTGA+AGG | 0.427589 | 7.4:-4718613 | None:intergenic |
GGAATAAATGTTTGCGGAGA+AGG | 0.429128 | 7.4:+4715045 | MS.gene050788:CDS |
ACACAGGAGAGGTGCCCATT+TGG | 0.429574 | 7.4:+4715945 | MS.gene050788:CDS |
GATCAGGAACAAGGACATAA+AGG | 0.430601 | 7.4:-4717217 | None:intergenic |
GCCTCCACTGCAAAGATTCA+TGG | 0.441436 | 7.4:-4716970 | None:intergenic |
GGTCTTGACCAGATTGCAAA+TGG | 0.443668 | 7.4:+4714392 | MS.gene050788:intron |
TGTAGGAGTCCTTCATCCCT+TGG | 0.460859 | 7.4:+4715428 | MS.gene050788:CDS |
AATCTTTGCAGTGGAGGCCC+TGG | 0.461556 | 7.4:+4716975 | MS.gene050788:CDS |
TGAACAAGATCTTTCCATGA+TGG | 0.463618 | 7.4:-4717858 | None:intergenic |
TGTGCAGAGTATTTCTAGTT+GGG | 0.464904 | 7.4:+4716073 | MS.gene050788:CDS |
TTTGGATCCTGCAAAGCACT+TGG | 0.464980 | 7.4:+4714844 | MS.gene050788:CDS |
GTGTCGAAAGTGTTTGTTCG+AGG | 0.469835 | 7.4:+4713840 | MS.gene050788:CDS |
AGCTACATGTATCAAACTGT+TGG | 0.472858 | 7.4:+4713602 | MS.gene050788:CDS |
CTTCACATGGCTGGTCAACT+GGG | 0.476586 | 7.4:+4716933 | MS.gene050788:CDS |
TTGTTCAGGAGGAGAATTCA+AGG | 0.480152 | 7.4:+4713668 | MS.gene050788:CDS |
TTATCAGTAGGCAAAGAATC+AGG | 0.480646 | 7.4:-4718010 | None:intergenic |
TGAAATGCCTCTACTTGAGA+TGG | 0.485639 | 7.4:+4715989 | MS.gene050788:CDS |
TGCGTGTTTACCTGGCTGTA+TGG | 0.486725 | 7.4:-4716113 | None:intergenic |
AATGAAATGCCAAGGGATGA+AGG | 0.487570 | 7.4:-4715437 | None:intergenic |
ATGTGCAGAGTATTTCTAGT+TGG | 0.487963 | 7.4:+4716072 | MS.gene050788:CDS |
TCATCAAAGCATCTTGAGCT+TGG | 0.488713 | 7.4:+4713692 | MS.gene050788:CDS |
ACCATCCTCGACATAAAGAA+TGG | 0.489983 | 7.4:-4717816 | None:intergenic |
CTGTATGGCCCAATGCAGCT+AGG | 0.492717 | 7.4:-4716098 | None:intergenic |
TTCGAGATGGTACGCCAAAT+GGG | 0.497265 | 7.4:-4715959 | None:intergenic |
ATTTCACAAGGTAGCTGCCA+TGG | 0.497566 | 7.4:+4714820 | MS.gene050788:intron |
ACAGGAACTATGTTGAAGAT+TGG | 0.500598 | 7.4:-4718707 | None:intergenic |
AAGGGATGAAGGACTCCTAC+AGG | 0.504490 | 7.4:-4715426 | None:intergenic |
GGGGTTTCAAGCACGAAAGT+TGG | 0.505130 | 7.4:+4717897 | MS.gene050788:CDS |
TATTCATGTCATCGATGTAA+AGG | 0.505177 | 7.4:-4715884 | None:intergenic |
ACAAGGACATAAAGGAATAT+GGG | 0.507989 | 7.4:-4717209 | None:intergenic |
TCGCCAAGGCGACGATCTGA+TGG | 0.511188 | 7.4:-4713541 | None:intergenic |
TCGTCGACGGAATCATCAAC+TGG | 0.516484 | 7.4:-4713572 | None:intergenic |
GCTACATGTATCAAACTGTT+GGG | 0.517649 | 7.4:+4713603 | MS.gene050788:CDS |
AAGGACTCCTACAGGAGCTA+TGG | 0.519302 | 7.4:-4715418 | None:intergenic |
ACTGATAATGTCAATAATGA+TGG | 0.523248 | 7.4:+4718025 | MS.gene050788:CDS |
ATCAAATATGCTGAATGTAT+GGG | 0.523394 | 7.4:+4713638 | MS.gene050788:CDS |
TCCTACAGGAGCTATGGAAT+CGG | 0.524150 | 7.4:-4715412 | None:intergenic |
TACCATTTCATTGAGGAGCA+AGG | 0.525232 | 7.4:-4713906 | None:intergenic |
CTGCAAAGATTCATGGTAGG+AGG | 0.525537 | 7.4:-4716963 | None:intergenic |
ATAAATGTTTGCGGAGAAGG+AGG | 0.529494 | 7.4:+4715048 | MS.gene050788:CDS |
TTTCACAAGGTAGCTGCCAT+GGG | 0.529657 | 7.4:+4714821 | MS.gene050788:intron |
CTGCATTGGGCCATACAGCC+AGG | 0.530190 | 7.4:+4716103 | MS.gene050788:CDS |
TTCTCTACCTAAATCACGAA+TGG | 0.531538 | 7.4:+4718054 | MS.gene050788:CDS |
CGGCCATCAGATCGTCGCCT+TGG | 0.532989 | 7.4:+4713538 | MS.gene050788:CDS |
AAATGTTTGCGGAGAAGGAG+GGG | 0.534898 | 7.4:+4715050 | MS.gene050788:CDS |
ATGATGAAGTGTATTCAATA+CGG | 0.538744 | 7.4:+4713518 | MS.gene050788:CDS |
GTAATCAAGAGGCTTGCATA+AGG | 0.539542 | 7.4:-4715574 | None:intergenic |
CCCATTCTTTATGTCGAGGA+TGG | 0.540339 | 7.4:+4717815 | MS.gene050788:CDS |
AAGGTGGTTGCACTTGTTAG+CGG | 0.540879 | 7.4:+4713473 | MS.gene050788:CDS |
CAGCTATCTTCATTTGTCTG+AGG | 0.547119 | 7.4:-4717151 | None:intergenic |
GGCATTTCATTTAGAAAACA+AGG | 0.548751 | 7.4:+4715449 | MS.gene050788:CDS |
CCATCCTCGACATAAAGAAT+GGG | 0.549132 | 7.4:-4717815 | None:intergenic |
AATAGATAACGACTTTGCCT+GGG | 0.551068 | 7.4:+4718120 | MS.gene050788:CDS |
AACCAATTACCATTTCATTG+AGG | 0.552375 | 7.4:-4713913 | None:intergenic |
CTTGGTTATAAAAGGACTCA+AGG | 0.554072 | 7.4:+4713710 | MS.gene050788:CDS |
TCAATATCGACATCTGCAGT+TGG | 0.554099 | 7.4:+4717056 | MS.gene050788:CDS |
TAAATGTTTGCGGAGAAGGA+GGG | 0.567566 | 7.4:+4715049 | MS.gene050788:CDS |
TTTCTGAGCCAGTAATTCGC+AGG | 0.569535 | 7.4:-4718774 | None:intergenic |
CCTGTTCCAGTTCAACCCCA+GGG | 0.570735 | 7.4:-4716992 | None:intergenic |
TGTAGAAATTGAGACCATCA+TGG | 0.571539 | 7.4:+4717844 | MS.gene050788:CDS |
TAGTTCCTGTTACAGGTGCT+GGG | 0.572397 | 7.4:+4718720 | MS.gene050788:CDS |
TCAAAGACATCATGTTATTG+GGG | 0.575374 | 7.4:+4717878 | MS.gene050788:CDS |
CTAAAATCCATCTCAAGTAG+AGG | 0.575649 | 7.4:-4715996 | None:intergenic |
TCATATGGAATAAATGTTTG+CGG | 0.578050 | 7.4:+4715039 | MS.gene050788:CDS |
AACTTTCTCAAATAAGTCAG+AGG | 0.579904 | 7.4:+4718666 | MS.gene050788:CDS |
AGAACACACAGCAGTAACAG+AGG | 0.585294 | 7.4:-4713786 | None:intergenic |
CTTGCAGGCAACCTTGCATG+AGG | 0.585355 | 7.4:+4716905 | MS.gene050788:intron |
TTGGATCCTGCAAAGCACTT+GGG | 0.586975 | 7.4:+4714845 | MS.gene050788:CDS |
ACCATGAATCTTTGCAGTGG+AGG | 0.594200 | 7.4:+4716969 | MS.gene050788:CDS |
ACTAACCATTATATCTTCCC+AGG | 0.594401 | 7.4:-4718137 | None:intergenic |
TCATTATTGACATTATCAGT+AGG | 0.594528 | 7.4:-4718022 | None:intergenic |
ATCTTGCAACCAGCAACACA+TGG | 0.595357 | 7.4:-4715664 | None:intergenic |
GAGGGTATACTTCACATGGC+TGG | 0.597033 | 7.4:+4716924 | MS.gene050788:CDS |
TGCAAAGATTCATGGTAGGA+GGG | 0.600755 | 7.4:-4716962 | None:intergenic |
TGGGATTGCCATTGTTCAGG+AGG | 0.601863 | 7.4:+4713657 | MS.gene050788:CDS |
AGGAACTTACAATAAAGAGC+GGG | 0.603286 | 7.4:-4715098 | None:intergenic |
TGAATTCTCCTCCTGAACAA+TGG | 0.603435 | 7.4:-4713665 | None:intergenic |
TTCTCAAATAAGTCAGAGGG+AGG | 0.606859 | 7.4:+4718670 | MS.gene050788:CDS |
ATTGGATAAGTGTAATCAAG+AGG | 0.608522 | 7.4:-4715585 | None:intergenic |
ATTTCAACTGTACTTCGAGA+TGG | 0.609688 | 7.4:-4715972 | None:intergenic |
AAAAGTGCATTGCAGAACAT+AGG | 0.614047 | 7.4:-4718641 | None:intergenic |
GTAGCTATCGAGTTCGTCGA+CGG | 0.614965 | 7.4:-4713585 | None:intergenic |
GAAGCCCATTCTTTATGTCG+AGG | 0.615387 | 7.4:+4717811 | MS.gene050788:CDS |
ACTTTCTCAAATAAGTCAGA+GGG | 0.618722 | 7.4:+4718667 | MS.gene050788:CDS |
AACTGGCATCAGATTCGCCA+AGG | 0.621298 | 7.4:-4713555 | None:intergenic |
AATAGTAGCTGTAACTGTGA+AGG | 0.625344 | 7.4:+4714415 | MS.gene050788:CDS |
GTGGTTGCACTTGTTAGCGG+CGG | 0.625443 | 7.4:+4713476 | MS.gene050788:CDS |
GTGAAGTATACCCTCATGCA+AGG | 0.630355 | 7.4:-4716916 | None:intergenic |
AAGATAGCTGAATTACAGGA+AGG | 0.634710 | 7.4:+4717164 | MS.gene050788:CDS |
GTATTGAATACACTTCATCA+TGG | 0.635668 | 7.4:-4713516 | None:intergenic |
GAACACACAGCAGTAACAGA+GGG | 0.635977 | 7.4:-4713785 | None:intergenic |
GCATGAGGGTATACTTCACA+TGG | 0.636722 | 7.4:+4716920 | MS.gene050788:CDS |
TCCGATTCCATAGCTCCTGT+AGG | 0.637048 | 7.4:+4715411 | MS.gene050788:CDS |
CTTTGCAGGATCCAAACCCA+TGG | 0.641084 | 7.4:-4714837 | None:intergenic |
AGTAAGCCTTCAAATGTCAG+TGG | 0.645405 | 7.4:+4718607 | MS.gene050788:CDS |
CCTACCATGAATCTTTGCAG+TGG | 0.651514 | 7.4:+4716966 | MS.gene050788:CDS |
TTGCAGGCAACCTTGCATGA+GGG | 0.657732 | 7.4:+4716906 | MS.gene050788:intron |
CCACTGCAAAGATTCATGGT+AGG | 0.663579 | 7.4:-4716966 | None:intergenic |
TGGTTGCAAGATTCATGCAA+TGG | 0.665299 | 7.4:+4715675 | MS.gene050788:CDS |
ATATGTGAAGTTTATAACAC+AGG | 0.670169 | 7.4:+4715929 | MS.gene050788:CDS |
TTCACATGGCTGGTCAACTG+GGG | 0.673143 | 7.4:+4716934 | MS.gene050788:CDS |
TTCCTGTTACAGGTGCTGGG+CGG | 0.686964 | 7.4:+4718723 | MS.gene050788:CDS |
AACTTCCCCAAAGATGAAGG+TGG | 0.687319 | 7.4:+4713457 | None:intergenic |
TCTGTGTTTGAAGTGCATGA+CGG | 0.689571 | 7.4:+4715534 | MS.gene050788:CDS |
TGAAGTTTATAACACAGGAG+AGG | 0.694284 | 7.4:+4715934 | MS.gene050788:CDS |
TCTTTGCAGTGGAGGCCCTG+GGG | 0.696989 | 7.4:+4716977 | MS.gene050788:CDS |
TAGGAACTTACAATAAAGAG+CGG | 0.707100 | 7.4:-4715099 | None:intergenic |
TGACATGAATAAGTTCTCTG+AGG | 0.714323 | 7.4:+4715896 | MS.gene050788:CDS |
ATGCAAGTAAGCATTTAACG+AGG | 0.725793 | 7.4:-4714879 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TAAAAAATACAAAAGAAAAA+TGG | + | chr7.4:4717630-4717649 | MS.gene050788:intron | 10.0% |
!! | ACAATATTATCCTTTATTAA+TGG | + | chr7.4:4717421-4717440 | MS.gene050788:intron | 15.0% |
!! | ATCCTTAAATTAAATATGTT+AGG | + | chr7.4:4716682-4716701 | MS.gene050788:intron | 15.0% |
!! | ATTTATCAAAATATACATAC+CGG | + | chr7.4:4718162-4718181 | MS.gene050788:intron | 15.0% |
!! | GTAATAATCTTAAGATAAAA+AGG | + | chr7.4:4718462-4718481 | MS.gene050788:intron | 15.0% |
!! | TCCTTAAATTAAATATGTTA+GGG | + | chr7.4:4716683-4716702 | MS.gene050788:intron | 15.0% |
!!! | AAGATTTAATGATTATTTTG+AGG | + | chr7.4:4715802-4715821 | MS.gene050788:CDS | 15.0% |
!!! | TCTTTTTTCAATTTGTATAT+GGG | + | chr7.4:4714478-4714497 | MS.gene050788:intron | 15.0% |
!! | AAAAATAAGATCTCTCTAAA+TGG | - | chr7.4:4714548-4714567 | None:intergenic | 20.0% |
!! | AAGAGAGTAATAAATAGTAA+AGG | + | chr7.4:4717475-4717494 | MS.gene050788:intron | 20.0% |
!! | AAGTAACTTATAATTTAGGA+CGG | + | chr7.4:4717572-4717591 | MS.gene050788:intron | 20.0% |
!! | AATTCTTTATCTATTTCACA+AGG | + | chr7.4:4714808-4714827 | MS.gene050788:intron | 20.0% |
!! | AGAATAATAAATTTGATCAC+TGG | - | chr7.4:4718488-4718507 | None:intergenic | 20.0% |
!! | AGAGAGTAATAAATAGTAAA+GGG | + | chr7.4:4717476-4717495 | MS.gene050788:intron | 20.0% |
!! | ATTAAAGAAACACAAAGTAA+AGG | - | chr7.4:4716283-4716302 | None:intergenic | 20.0% |
!! | ATTATCCTTTATTAATGGTA+TGG | + | chr7.4:4717426-4717445 | MS.gene050788:intron | 20.0% |
!! | GCTATATACTCTTAAAAATA+GGG | + | chr7.4:4714640-4714659 | MS.gene050788:intron | 20.0% |
!! | TATTATTGTGAAAATTGACT+TGG | + | chr7.4:4716199-4716218 | MS.gene050788:intron | 20.0% |
!! | TATTGTAAAGTAACTCATAA+AGG | - | chr7.4:4717407-4717426 | None:intergenic | 20.0% |
!! | TCCAAAGTAACTTATAATTT+AGG | + | chr7.4:4717568-4717587 | MS.gene050788:intron | 20.0% |
!! | TCCTAAATTATAAGTTACTT+TGG | - | chr7.4:4717572-4717591 | None:intergenic | 20.0% |
!! | TGCAAATAATAAAGGTAAAA+AGG | + | chr7.4:4716043-4716062 | MS.gene050788:CDS | 20.0% |
!! | TTATCCTTTATTAATGGTAT+GGG | + | chr7.4:4717427-4717446 | MS.gene050788:intron | 20.0% |
!!! | AAATAATTCTAACTCTGTTT+TGG | + | chr7.4:4714371-4714390 | MS.gene050788:intron | 20.0% |
!!! | AAGGAATTAAAGTATCATTT+TGG | - | chr7.4:4716647-4716666 | None:intergenic | 20.0% |
!!! | AGGAATTAAAGTATCATTTT+GGG | - | chr7.4:4716646-4716665 | None:intergenic | 20.0% |
!!! | ATCATTTTGAAAACATGAAA+TGG | - | chr7.4:4718246-4718265 | None:intergenic | 20.0% |
!!! | ATTATTGTGAAAATTGACTT+GGG | + | chr7.4:4716200-4716219 | MS.gene050788:intron | 20.0% |
!!! | CATATTTAATTTAAGGATGA+AGG | - | chr7.4:4716680-4716699 | None:intergenic | 20.0% |
!!! | CTCTTTTTTCAATTTGTATA+TGG | + | chr7.4:4714477-4714496 | MS.gene050788:intron | 20.0% |
!!! | TAAATAGTAAAGGGTATAAA+AGG | + | chr7.4:4717485-4717504 | MS.gene050788:intron | 20.0% |
!!! | TAATTTGATTAGCTTCATAT+GGG | + | chr7.4:4716299-4716318 | MS.gene050788:intron | 20.0% |
!!! | TACTTGGATAATTGTTATTT+TGG | + | chr7.4:4714780-4714799 | MS.gene050788:intron | 20.0% |
!!! | TCATTTTGAAAACATGAAAT+GGG | - | chr7.4:4718245-4718264 | None:intergenic | 20.0% |
!!! | TTAATTTGATTAGCTTCATA+TGG | + | chr7.4:4716298-4716317 | MS.gene050788:intron | 20.0% |
!!! | TTCTAAAAATATCACTTTAC+TGG | + | chr7.4:4717094-4717113 | MS.gene050788:CDS | 20.0% |
!!! | TTGACAAGATTTTAAATCAT+TGG | + | chr7.4:4716429-4716448 | MS.gene050788:intron | 20.0% |
!!! | TTTTTGTAATTTTGTGTACT+TGG | + | chr7.4:4714764-4714783 | MS.gene050788:intron | 20.0% |
! | AAAACTTTGTCCCAAATTAT+AGG | - | chr7.4:4717547-4717566 | None:intergenic | 25.0% |
! | AAACTTTGTCCCAAATTATA+GGG | - | chr7.4:4717546-4717565 | None:intergenic | 25.0% |
! | AAATATCGATCATAAGTTTG+AGG | - | chr7.4:4715292-4715311 | None:intergenic | 25.0% |
! | AAGTTGAATTCCAATGAAAA+AGG | - | chr7.4:4714743-4714762 | None:intergenic | 25.0% |
! | AATCTCTAAACCTATACAAA+TGG | - | chr7.4:4717323-4717342 | None:intergenic | 25.0% |
! | AATTCCAATGAAAAAGGAAA+TGG | - | chr7.4:4714737-4714756 | None:intergenic | 25.0% |
! | ACTTGTGATTGACAATATAA+TGG | - | chr7.4:4717969-4717988 | None:intergenic | 25.0% |
! | ATATGTGAAGTTTATAACAC+AGG | + | chr7.4:4715929-4715948 | MS.gene050788:CDS | 25.0% |
! | ATCAAATATGCTGAATGTAT+GGG | + | chr7.4:4713638-4713657 | MS.gene050788:CDS | 25.0% |
! | ATCTCTAAACCTATACAAAT+GGG | - | chr7.4:4717322-4717341 | None:intergenic | 25.0% |
! | ATGATGAAGTGTATTCAATA+CGG | + | chr7.4:4713518-4713537 | MS.gene050788:CDS | 25.0% |
! | ATGGAGGAATAAAATTAATC+CGG | - | chr7.4:4718184-4718203 | None:intergenic | 25.0% |
! | ATTTAGAAGAGTCATATGAT+AGG | - | chr7.4:4714519-4714538 | None:intergenic | 25.0% |
! | CAAACATATGTTATGTAATC+TGG | + | chr7.4:4717687-4717706 | MS.gene050788:intron | 25.0% |
! | CAAATATATGTTCGAAACAA+TGG | - | chr7.4:4718203-4718222 | None:intergenic | 25.0% |
! | CACAATAATATTAATGAAGC+AGG | - | chr7.4:4716189-4716208 | None:intergenic | 25.0% |
! | GAAATCAATGCAAAATATTC+TGG | + | chr7.4:4716359-4716378 | MS.gene050788:intron | 25.0% |
! | GGCTATATACTCTTAAAAAT+AGG | + | chr7.4:4714639-4714658 | MS.gene050788:intron | 25.0% |
! | TAAATGTTGTCCATTGATAT+CGG | - | chr7.4:4714596-4714615 | None:intergenic | 25.0% |
! | TATCAATGGACAACATTTAA+AGG | + | chr7.4:4714597-4714616 | MS.gene050788:intron | 25.0% |
! | TCATATGGAATAAATGTTTG+CGG | + | chr7.4:4715039-4715058 | MS.gene050788:CDS | 25.0% |
! | TCATTATTGACATTATCAGT+AGG | - | chr7.4:4718025-4718044 | None:intergenic | 25.0% |
! | TCCTCAAAATATTTATGTCA+TGG | + | chr7.4:4717727-4717746 | MS.gene050788:intron | 25.0% |
! | TGTAAAACACCCTATAATTT+GGG | + | chr7.4:4717534-4717553 | MS.gene050788:intron | 25.0% |
! | TGTCAAAGAACAAAATAATG+TGG | - | chr7.4:4715748-4715767 | None:intergenic | 25.0% |
! | TTATATATACACACAGAGAA+AGG | - | chr7.4:4714939-4714958 | None:intergenic | 25.0% |
! | TTCAAAGACATCATGTTATT+GGG | + | chr7.4:4717877-4717896 | MS.gene050788:CDS | 25.0% |
!! | ACCATGACATAAATATTTTG+AGG | - | chr7.4:4717731-4717750 | None:intergenic | 25.0% |
!! | ACTGATAATGTCAATAATGA+TGG | + | chr7.4:4718025-4718044 | MS.gene050788:CDS | 25.0% |
!! | CAGTGTGTTTAAACTAATTT+TGG | + | chr7.4:4716614-4716633 | MS.gene050788:intron | 25.0% |
!! | GCCCTAACATATTTAATTTA+AGG | - | chr7.4:4716687-4716706 | None:intergenic | 25.0% |
!! | GGATACAAATAATTTGTGTA+TGG | + | chr7.4:4718334-4718353 | MS.gene050788:intron | 25.0% |
!! | GTTTCTCTCATAATTTTTCT+AGG | - | chr7.4:4714225-4714244 | None:intergenic | 25.0% |
!! | TTTTCTAAATGAAATGCCAA+GGG | - | chr7.4:4715447-4715466 | None:intergenic | 25.0% |
!! | TTTTTCGTACATAACTATCA+AGG | + | chr7.4:4716511-4716530 | MS.gene050788:intron | 25.0% |
!!! | ACATATATTTGTTGTGCATT+CGG | + | chr7.4:4718212-4718231 | MS.gene050788:intron | 25.0% |
!!! | ATTGAATTTTCAAGATCAGT+AGG | - | chr7.4:4715245-4715264 | None:intergenic | 25.0% |
!!! | GGAATTAAAGTATCATTTTG+GGG | - | chr7.4:4716645-4716664 | None:intergenic | 25.0% |
!!! | GTTTTGGTTGCAAATAATAA+AGG | + | chr7.4:4716035-4716054 | MS.gene050788:CDS | 25.0% |
!!! | TTTTTCAATTTGTATATGGG+AGG | + | chr7.4:4714481-4714500 | MS.gene050788:intron | 25.0% |
AACAAGGACATAAAGGAATA+TGG | - | chr7.4:4717213-4717232 | None:intergenic | 30.0% | |
AACCAATTACCATTTCATTG+AGG | - | chr7.4:4713916-4713935 | None:intergenic | 30.0% | |
AACTTTCTCAAATAAGTCAG+AGG | + | chr7.4:4718666-4718685 | MS.gene050788:CDS | 30.0% | |
AATGAAGATAGCTGAATTAC+AGG | + | chr7.4:4717160-4717179 | MS.gene050788:CDS | 30.0% | |
ACAACATTAGAGAGAAAGAT+TGG | + | chr7.4:4714062-4714081 | MS.gene050788:intron | 30.0% | |
ACAAGGACATAAAGGAATAT+GGG | - | chr7.4:4717212-4717231 | None:intergenic | 30.0% | |
ACTTTCTCAAATAAGTCAGA+GGG | + | chr7.4:4718667-4718686 | MS.gene050788:CDS | 30.0% | |
AGTGAAGTTCACTAAGTTTA+GGG | + | chr7.4:4716775-4716794 | MS.gene050788:intron | 30.0% | |
ATATATGTTCGAAACAATGG+AGG | - | chr7.4:4718200-4718219 | None:intergenic | 30.0% | |
ATCCAATTTCAAATGCTATC+TGG | + | chr7.4:4716851-4716870 | MS.gene050788:intron | 30.0% | |
ATCTTGAGCTTGGTTATAAA+AGG | + | chr7.4:4713702-4713721 | MS.gene050788:CDS | 30.0% | |
ATTGGATAAGTGTAATCAAG+AGG | - | chr7.4:4715588-4715607 | None:intergenic | 30.0% | |
CAACATTAGAGAGAAAGATT+GGG | + | chr7.4:4714063-4714082 | MS.gene050788:intron | 30.0% | |
CATCAAATATGCTGAATGTA+TGG | + | chr7.4:4713637-4713656 | MS.gene050788:CDS | 30.0% | |
CGAATAGATACAGAAGAAAA+CGG | - | chr7.4:4715320-4715339 | None:intergenic | 30.0% | |
CTGTAAAACACCCTATAATT+TGG | + | chr7.4:4717533-4717552 | MS.gene050788:intron | 30.0% | |
CTTTCCCATACCATTAATAA+AGG | - | chr7.4:4717434-4717453 | None:intergenic | 30.0% | |
GAGATTTCTATGCAGAATTT+GGG | + | chr7.4:4715510-4715529 | MS.gene050788:CDS | 30.0% | |
GGCATTTCATTTAGAAAACA+AGG | + | chr7.4:4715449-4715468 | MS.gene050788:CDS | 30.0% | |
GTATTGAATACACTTCATCA+TGG | - | chr7.4:4713519-4713538 | None:intergenic | 30.0% | |
GTTCAAAGACATCATGTTAT+TGG | + | chr7.4:4717876-4717895 | MS.gene050788:CDS | 30.0% | |
TAAATTGTCCGAGAAAGATT+AGG | - | chr7.4:4718536-4718555 | None:intergenic | 30.0% | |
TAGGAACTTACAATAAAGAG+CGG | - | chr7.4:4715102-4715121 | None:intergenic | 30.0% | |
TATGGGAACAGTTTATTCTT+TGG | + | chr7.4:4716316-4716335 | MS.gene050788:intron | 30.0% | |
TATTCATGTCATCGATGTAA+AGG | - | chr7.4:4715887-4715906 | None:intergenic | 30.0% | |
TCAAAGACATCATGTTATTG+GGG | + | chr7.4:4717878-4717897 | MS.gene050788:CDS | 30.0% | |
TCAAATCACATAAACCAAAG+AGG | - | chr7.4:4717659-4717678 | None:intergenic | 30.0% | |
TCACACTCTTAAAATAGCAA+AGG | - | chr7.4:4717383-4717402 | None:intergenic | 30.0% | |
TGAGATTTCTATGCAGAATT+TGG | + | chr7.4:4715509-4715528 | MS.gene050788:CDS | 30.0% | |
TGTAGATTGACATTGTTCTA+TGG | + | chr7.4:4714972-4714991 | MS.gene050788:intron | 30.0% | |
TTATGTTCTACGACATCAAT+TGG | - | chr7.4:4715606-4715625 | None:intergenic | 30.0% | |
TTTCTTTATAGCAGATTTGC+AGG | + | chr7.4:4715779-4715798 | MS.gene050788:intron | 30.0% | |
! | AAACTAGGTTTAGTTGGTTT+GGG | + | chr7.4:4714112-4714131 | MS.gene050788:intron | 30.0% |
! | AACAGTTTATTCTTTGGAAG+TGG | + | chr7.4:4716322-4716341 | MS.gene050788:intron | 30.0% |
! | AACTTATAATTTAGGACGGA+GGG | + | chr7.4:4717576-4717595 | MS.gene050788:intron | 30.0% |
! | ACAGTTTATTCTTTGGAAGT+GGG | + | chr7.4:4716323-4716342 | MS.gene050788:intron | 30.0% |
! | ACTTTCTTCCTCAATCATTT+TGG | + | chr7.4:4718296-4718315 | MS.gene050788:intron | 30.0% |
! | ATAGGGTTGCTTTGAATATA+TGG | + | chr7.4:4714657-4714676 | MS.gene050788:intron | 30.0% |
! | ATGGTTGCTAACAATTGTTT+TGG | + | chr7.4:4717746-4717765 | MS.gene050788:intron | 30.0% |
! | CTTTCTTCCTCAATCATTTT+GGG | + | chr7.4:4718297-4718316 | MS.gene050788:intron | 30.0% |
! | GTTTTCTAAATGAAATGCCA+AGG | - | chr7.4:4715448-4715467 | None:intergenic | 30.0% |
! | TAACTTATAATTTAGGACGG+AGG | + | chr7.4:4717575-4717594 | MS.gene050788:intron | 30.0% |
! | TACCAGATAGCATTTGAAAT+TGG | - | chr7.4:4716856-4716875 | None:intergenic | 30.0% |
! | TAGAGCATATGTTGAAGTTT+TGG | + | chr7.4:4716019-4716038 | MS.gene050788:CDS | 30.0% |
! | TGGTTGCTAACAATTGTTTT+GGG | + | chr7.4:4717747-4717766 | MS.gene050788:intron | 30.0% |
! | TTCCACATCTTTTCTACTAT+AGG | - | chr7.4:4714094-4714113 | None:intergenic | 30.0% |
! | TTTCTTCCTCAATCATTTTG+GGG | + | chr7.4:4718298-4718317 | MS.gene050788:intron | 30.0% |
!! | AAGAAACTAGAGTACCTTTT+TGG | - | chr7.4:4717245-4717264 | None:intergenic | 30.0% |
!! | GAAACCATTTCCTTTTTCAT+TGG | + | chr7.4:4714730-4714749 | MS.gene050788:intron | 30.0% |
!! | TGTCTTGTGTTTTTAAAGAG+TGG | - | chr7.4:4715482-4715501 | None:intergenic | 30.0% |
AAGAAAAATGGACACCTCTT+TGG | + | chr7.4:4717642-4717661 | MS.gene050788:intron | 35.0% | |
AAGATAGCTGAATTACAGGA+AGG | + | chr7.4:4717164-4717183 | MS.gene050788:CDS | 35.0% | |
AATAGATAACGACTTTGCCT+GGG | + | chr7.4:4718120-4718139 | MS.gene050788:CDS | 35.0% | |
AATAGTAGCTGTAACTGTGA+AGG | + | chr7.4:4714415-4714434 | MS.gene050788:CDS | 35.0% | |
AATGCAAAATATTCTGGCAC+TGG | + | chr7.4:4716365-4716384 | MS.gene050788:intron | 35.0% | |
ACAGGAACTATGTTGAAGAT+TGG | - | chr7.4:4718710-4718729 | None:intergenic | 35.0% | |
ACTAAAAAACAGTGAAGCAG+TGG | + | chr7.4:4717016-4717035 | MS.gene050788:CDS | 35.0% | |
ACTAACCATTATATCTTCCC+AGG | - | chr7.4:4718140-4718159 | None:intergenic | 35.0% | |
AGCTACATGTATCAAACTGT+TGG | + | chr7.4:4713602-4713621 | MS.gene050788:CDS | 35.0% | |
AGGAACTTACAATAAAGAGC+GGG | - | chr7.4:4715101-4715120 | None:intergenic | 35.0% | |
AGGAAGATGGAGTACAATAT+AGG | + | chr7.4:4718412-4718431 | MS.gene050788:intron | 35.0% | |
AGGACCATACAAAACAAACA+GGG | - | chr7.4:4718516-4718535 | None:intergenic | 35.0% | |
ATATACACACAGAGAAAGGA+AGG | - | chr7.4:4714935-4714954 | None:intergenic | 35.0% | |
ATGCAAGTAAGCATTTAACG+AGG | - | chr7.4:4714882-4714901 | None:intergenic | 35.0% | |
ATGTGGAAACTAGGTTTAGT+TGG | + | chr7.4:4714106-4714125 | MS.gene050788:intron | 35.0% | |
ATTGTCAATCACAAGTGTTC+TGG | + | chr7.4:4717973-4717992 | MS.gene050788:CDS | 35.0% | |
ATTTCAACTGTACTTCGAGA+TGG | - | chr7.4:4715975-4715994 | None:intergenic | 35.0% | |
CACCTATAGTAGAAAAGATG+TGG | + | chr7.4:4714089-4714108 | MS.gene050788:intron | 35.0% | |
CAGTGAAGTTCACTAAGTTT+AGG | + | chr7.4:4716774-4716793 | MS.gene050788:intron | 35.0% | |
CTAAAATCCATCTCAAGTAG+AGG | - | chr7.4:4715999-4716018 | None:intergenic | 35.0% | |
CTACTATTCCATTTGCAATC+TGG | - | chr7.4:4714403-4714422 | None:intergenic | 35.0% | |
CTCCTCAATGAAATGGTAAT+TGG | + | chr7.4:4713911-4713930 | MS.gene050788:intron | 35.0% | |
CTTGACGAATTGCATATCAA+TGG | - | chr7.4:4717295-4717314 | None:intergenic | 35.0% | |
CTTGGTTATAAAAGGACTCA+AGG | + | chr7.4:4713710-4713729 | MS.gene050788:CDS | 35.0% | |
GAAACTAGGTTTAGTTGGTT+TGG | + | chr7.4:4714111-4714130 | MS.gene050788:intron | 35.0% | |
GAAACTGACATGATACTGTT+TGG | - | chr7.4:4716392-4716411 | None:intergenic | 35.0% | |
GAGTCATATGATAGGAACAT+AGG | - | chr7.4:4714511-4714530 | None:intergenic | 35.0% | |
GCTACATGTATCAAACTGTT+GGG | + | chr7.4:4713603-4713622 | MS.gene050788:CDS | 35.0% | |
GGATGAAGGAATGAAATACA+AGG | - | chr7.4:4716666-4716685 | None:intergenic | 35.0% | |
GTAGAAAAGATGTGGAAACT+AGG | + | chr7.4:4714097-4714116 | MS.gene050788:intron | 35.0% | |
TAATAGATAACGACTTTGCC+TGG | + | chr7.4:4718119-4718138 | MS.gene050788:CDS | 35.0% | |
TAGGACCATACAAAACAAAC+AGG | - | chr7.4:4718517-4718536 | None:intergenic | 35.0% | |
TATAATGGCACATAGCTTTC+CGG | - | chr7.4:4717954-4717973 | None:intergenic | 35.0% | |
TGAACAAGATCTTTCCATGA+TGG | - | chr7.4:4717861-4717880 | None:intergenic | 35.0% | |
TGAAGTTTATAACACAGGAG+AGG | + | chr7.4:4715934-4715953 | MS.gene050788:CDS | 35.0% | |
TGACATGAATAAGTTCTCTG+AGG | + | chr7.4:4715896-4715915 | MS.gene050788:CDS | 35.0% | |
TGATATGCAATTCGTCAAGA+AGG | + | chr7.4:4717296-4717315 | MS.gene050788:intron | 35.0% | |
TGTAGAAATTGAGACCATCA+TGG | + | chr7.4:4717844-4717863 | MS.gene050788:CDS | 35.0% | |
TGTATGGTCCTAATCTTTCT+CGG | + | chr7.4:4718525-4718544 | MS.gene050788:intron | 35.0% | |
TTATCAGTAGGCAAAGAATC+AGG | - | chr7.4:4718013-4718032 | None:intergenic | 35.0% | |
TTCAACATAGTTCCTGTTAC+AGG | + | chr7.4:4718713-4718732 | MS.gene050788:CDS | 35.0% | |
TTCACGAATTAAGCTTGATG+AGG | + | chr7.4:4713990-4714009 | MS.gene050788:intron | 35.0% | |
TTCTCTACCTAAATCACGAA+TGG | + | chr7.4:4718054-4718073 | MS.gene050788:CDS | 35.0% | |
TTGGGTGAATATATGTGTGA+TGG | + | chr7.4:4717765-4717784 | MS.gene050788:intron | 35.0% | |
TTGTTCCTGATCTACCAAAA+AGG | + | chr7.4:4717228-4717247 | MS.gene050788:CDS | 35.0% | |
TTTCAGAAATGTGTGATTCC+CGG | + | chr7.4:4717932-4717951 | MS.gene050788:CDS | 35.0% | |
TTTGAAGGCAAAAGAACATG+AGG | - | chr7.4:4718362-4718381 | None:intergenic | 35.0% | |
! | AAAAGTGCATTGCAGAACAT+AGG | - | chr7.4:4718644-4718663 | None:intergenic | 35.0% |
! | AAGTCTTATACCACTGATTG+GGG | - | chr7.4:4714322-4714341 | None:intergenic | 35.0% |
! | ACTCTTTTTGACAGGTCATA+TGG | + | chr7.4:4715024-4715043 | MS.gene050788:intron | 35.0% |
! | AGTTGGGGTGTTCTTATTAA+AGG | + | chr7.4:4716719-4716738 | MS.gene050788:intron | 35.0% |
! | CAAGTCTTATACCACTGATT+GGG | - | chr7.4:4714323-4714342 | None:intergenic | 35.0% |
! | CATGTTCTTTTGCCTTCAAA+AGG | + | chr7.4:4718362-4718381 | MS.gene050788:intron | 35.0% |
! | CCTCAGTTTTCCATAAAACT+GGG | + | chr7.4:4715178-4715197 | MS.gene050788:intron | 35.0% |
! | GTAAATTGAGCCCAGTTTTA+TGG | - | chr7.4:4715191-4715210 | None:intergenic | 35.0% |
! | TCCTCAGTTTTCCATAAAAC+TGG | + | chr7.4:4715177-4715196 | MS.gene050788:intron | 35.0% |
! | TCTGTGTAACTCTTTTTGAC+AGG | + | chr7.4:4715016-4715035 | MS.gene050788:intron | 35.0% |
! | TTGTTTCTTTGGCGTACTTA+TGG | + | chr7.4:4713870-4713889 | MS.gene050788:CDS | 35.0% |
! | TTTTGTTACGCCAAGTCAAA+AGG | + | chr7.4:4713756-4713775 | MS.gene050788:CDS | 35.0% |
!! | ATGTGCAGAGTATTTCTAGT+TGG | + | chr7.4:4716072-4716091 | MS.gene050788:CDS | 35.0% |
!! | CTGTCGATTCAAGTTGATTT+AGG | + | chr7.4:4716252-4716271 | MS.gene050788:intron | 35.0% |
!! | TATGTTAGGGCATTGTAACT+AGG | + | chr7.4:4716696-4716715 | MS.gene050788:intron | 35.0% |
!! | TGTGCAGAGTATTTCTAGTT+GGG | + | chr7.4:4716073-4716092 | MS.gene050788:CDS | 35.0% |
!! | TTTTTGGTAGATCAGGAACA+AGG | - | chr7.4:4717229-4717248 | None:intergenic | 35.0% |
!!! | AAAAGGCATCCATGCATTTT+TGG | + | chr7.4:4718379-4718398 | MS.gene050788:intron | 35.0% |
!!! | AAAGGCATCCATGCATTTTT+GGG | + | chr7.4:4718380-4718399 | MS.gene050788:intron | 35.0% |
AACTGCTCCATTCGTGATTT+AGG | - | chr7.4:4718064-4718083 | None:intergenic | 40.0% | |
AATGAAATGCCAAGGGATGA+AGG | - | chr7.4:4715440-4715459 | None:intergenic | 40.0% | |
ACCATCCTCGACATAAAGAA+TGG | - | chr7.4:4717819-4717838 | None:intergenic | 40.0% | |
ACTGACATTTGAAGGCTTAC+TGG | - | chr7.4:4718608-4718627 | None:intergenic | 40.0% | |
AGTAAGCCTTCAAATGTCAG+TGG | + | chr7.4:4718607-4718626 | MS.gene050788:CDS | 40.0% | |
ATAAATGTTTGCGGAGAAGG+AGG | + | chr7.4:4715048-4715067 | MS.gene050788:CDS | 40.0% | |
ATAATGGCACATAGCTTTCC+GGG | - | chr7.4:4717953-4717972 | None:intergenic | 40.0% | |
ATAGCCGCATTAGCATATCA+TGG | - | chr7.4:4714625-4714644 | None:intergenic | 40.0% | |
ATCCTTGCTCCTCAATGAAA+TGG | + | chr7.4:4713904-4713923 | MS.gene050788:CDS | 40.0% | |
CAGCTATCTTCATTTGTCTG+AGG | - | chr7.4:4717154-4717173 | None:intergenic | 40.0% | |
CCAATCAGTGGTATAAGACT+TGG | + | chr7.4:4714321-4714340 | MS.gene050788:intron | 40.0% | |
CCATCCTCGACATAAAGAAT+GGG | - | chr7.4:4717818-4717837 | None:intergenic | 40.0% | |
CTCCTTGCTACAAAATGTAC+AGG | - | chr7.4:4714153-4714172 | None:intergenic | 40.0% | |
CTGACATTTGAAGGCTTACT+GGG | - | chr7.4:4718607-4718626 | None:intergenic | 40.0% | |
CTTCACTTCAACATATGCAC+TGG | - | chr7.4:4717795-4717814 | None:intergenic | 40.0% | |
CTTTGCCTGGGAAGATATAA+TGG | + | chr7.4:4718132-4718151 | MS.gene050788:CDS | 40.0% | |
GATCAGGAACAAGGACATAA+AGG | - | chr7.4:4717220-4717239 | None:intergenic | 40.0% | |
GATCAGTAGGAACACATAAC+AGG | - | chr7.4:4715232-4715251 | None:intergenic | 40.0% | |
GGAATAAATGTTTGCGGAGA+AGG | + | chr7.4:4715045-4715064 | MS.gene050788:CDS | 40.0% | |
GGACCATACAAAACAAACAG+GGG | - | chr7.4:4718515-4718534 | None:intergenic | 40.0% | |
GGTTCCATGATATGCTAATG+CGG | + | chr7.4:4714618-4714637 | MS.gene050788:intron | 40.0% | |
GTAATCAAGAGGCTTGCATA+AGG | - | chr7.4:4715577-4715596 | None:intergenic | 40.0% | |
TAAATGTTTGCGGAGAAGGA+GGG | + | chr7.4:4715049-4715068 | MS.gene050788:CDS | 40.0% | |
TACCATTTCATTGAGGAGCA+AGG | - | chr7.4:4713909-4713928 | None:intergenic | 40.0% | |
TACTCCATCTTCCTTTACTC+AGG | - | chr7.4:4718406-4718425 | None:intergenic | 40.0% | |
TCAAGAAGGCCCATTTGTAT+AGG | + | chr7.4:4717310-4717329 | MS.gene050788:intron | 40.0% | |
TCAATATCGACATCTGCAGT+TGG | + | chr7.4:4717056-4717075 | MS.gene050788:CDS | 40.0% | |
TGAAATGCCTCTACTTGAGA+TGG | + | chr7.4:4715989-4716008 | MS.gene050788:CDS | 40.0% | |
TGAATTCTCCTCCTGAACAA+TGG | - | chr7.4:4713668-4713687 | None:intergenic | 40.0% | |
TGCAAAGATTCATGGTAGGA+GGG | - | chr7.4:4716965-4716984 | None:intergenic | 40.0% | |
TGGTTGCAAGATTCATGCAA+TGG | + | chr7.4:4715675-4715694 | MS.gene050788:CDS | 40.0% | |
TTCTCAAATAAGTCAGAGGG+AGG | + | chr7.4:4718670-4718689 | MS.gene050788:CDS | 40.0% | |
TTCTCAGTTAACCACACCAA+TGG | - | chr7.4:4715128-4715147 | None:intergenic | 40.0% | |
TTGTAAGTTCCTACCACCAT+TGG | + | chr7.4:4715109-4715128 | MS.gene050788:intron | 40.0% | |
TTGTTCAGGAGGAGAATTCA+AGG | + | chr7.4:4713668-4713687 | MS.gene050788:CDS | 40.0% | |
! | AATGCATGGATGCCTTTTGA+AGG | - | chr7.4:4718377-4718396 | None:intergenic | 40.0% |
! | CCAAGTCTTATACCACTGAT+TGG | - | chr7.4:4714324-4714343 | None:intergenic | 40.0% |
! | GACCTGTACATTTTGTAGCA+AGG | + | chr7.4:4714148-4714167 | MS.gene050788:intron | 40.0% |
! | TCATCAAAGCATCTTGAGCT+TGG | + | chr7.4:4713692-4713711 | MS.gene050788:CDS | 40.0% |
! | TCTGTGTTTGAAGTGCATGA+CGG | + | chr7.4:4715534-4715553 | MS.gene050788:CDS | 40.0% |
! | TGGGGTGTTCTTATTAAAGG+AGG | + | chr7.4:4716722-4716741 | MS.gene050788:intron | 40.0% |
! | TTGTCCATTGATATCGGTTG+AGG | - | chr7.4:4714590-4714609 | None:intergenic | 40.0% |
!! | AAATTGACTTGGGACATCGT+TGG | + | chr7.4:4716210-4716229 | MS.gene050788:intron | 40.0% |
!! | CAACTAGCAGCGTTTGATTT+TGG | + | chr7.4:4715837-4715856 | MS.gene050788:CDS | 40.0% |
!! | CCCAGTTTTATGGAAAACTG+AGG | - | chr7.4:4715181-4715200 | None:intergenic | 40.0% |
!! | GAAAGTGTTTGTTCGAGGTT+AGG | + | chr7.4:4713845-4713864 | MS.gene050788:CDS | 40.0% |
!! | GAGGTTAGGTCTTGTTTCTT+TGG | + | chr7.4:4713859-4713878 | MS.gene050788:CDS | 40.0% |
!! | GAGTACCTTTTTGGTAGATC+AGG | - | chr7.4:4717236-4717255 | None:intergenic | 40.0% |
!! | TCTAATGCTTCTTGACTTGC+AGG | + | chr7.4:4716890-4716909 | MS.gene050788:intron | 40.0% |
!! | TTCCTCAATCATTTTGGGGA+GGG | + | chr7.4:4718302-4718321 | MS.gene050788:intron | 40.0% |
!! | TTTTGGGGAGGGAGATATTA+TGG | + | chr7.4:4718313-4718332 | MS.gene050788:intron | 40.0% |
AAATGTTTGCGGAGAAGGAG+GGG | + | chr7.4:4715050-4715069 | MS.gene050788:CDS | 45.0% | |
ACACATTCTCCATGTGTTGC+TGG | + | chr7.4:4715655-4715674 | MS.gene050788:CDS | 45.0% | |
ACCATGAATCTTTGCAGTGG+AGG | + | chr7.4:4716969-4716988 | MS.gene050788:CDS | 45.0% | |
AGAACACACAGCAGTAACAG+AGG | - | chr7.4:4713789-4713808 | None:intergenic | 45.0% | |
AGCTCCTCAACCGATATCAA+TGG | + | chr7.4:4714583-4714602 | MS.gene050788:intron | 45.0% | |
AGGATGTTGTGTTGGATGTG+TGG | + | chr7.4:4714010-4714029 | MS.gene050788:intron | 45.0% | |
ATAGTTCCTGTTACAGGTGC+TGG | + | chr7.4:4718719-4718738 | MS.gene050788:CDS | 45.0% | |
ATCTTGCAACCAGCAACACA+TGG | - | chr7.4:4715667-4715686 | None:intergenic | 45.0% | |
ATTTCACAAGGTAGCTGCCA+TGG | + | chr7.4:4714820-4714839 | MS.gene050788:intron | 45.0% | |
CCACTGCAAAGATTCATGGT+AGG | - | chr7.4:4716969-4716988 | None:intergenic | 45.0% | |
CCCATTCTTTATGTCGAGGA+TGG | + | chr7.4:4717815-4717834 | MS.gene050788:CDS | 45.0% | |
CCTACCATGAATCTTTGCAG+TGG | + | chr7.4:4716966-4716985 | MS.gene050788:CDS | 45.0% | |
CTCATGTCATGCAGAGTTTG+AGG | + | chr7.4:4718573-4718592 | MS.gene050788:intron | 45.0% | |
CTGCAAAGATTCATGGTAGG+AGG | - | chr7.4:4716966-4716985 | None:intergenic | 45.0% | |
GAACACACAGCAGTAACAGA+GGG | - | chr7.4:4713788-4713807 | None:intergenic | 45.0% | |
GAAGCCCATTCTTTATGTCG+AGG | + | chr7.4:4717811-4717830 | MS.gene050788:CDS | 45.0% | |
GCAGGTCACTACATCATCTA+TGG | - | chr7.4:4718759-4718778 | None:intergenic | 45.0% | |
GCTTGATGAGGATGTTGTGT+TGG | + | chr7.4:4714002-4714021 | MS.gene050788:intron | 45.0% | |
GGCATTGTAACTAGGAGTTG+GGG | + | chr7.4:4716704-4716723 | MS.gene050788:intron | 45.0% | |
GGTCTTGACCAGATTGCAAA+TGG | + | chr7.4:4714392-4714411 | MS.gene050788:intron | 45.0% | |
GTATGGGATTGCCATTGTTC+AGG | + | chr7.4:4713654-4713673 | MS.gene050788:CDS | 45.0% | |
GTGAAGTATACCCTCATGCA+AGG | - | chr7.4:4716919-4716938 | None:intergenic | 45.0% | |
TACTCAGGCCCAAAAATGCA+TGG | - | chr7.4:4718391-4718410 | None:intergenic | 45.0% | |
TAGTTCCTGTTACAGGTGCT+GGG | + | chr7.4:4718720-4718739 | MS.gene050788:CDS | 45.0% | |
TCAGCTCCACTGACATTTGA+AGG | - | chr7.4:4718616-4718635 | None:intergenic | 45.0% | |
TCAGTTAACCACACCAATGG+TGG | - | chr7.4:4715125-4715144 | None:intergenic | 45.0% | |
TCCTACAGGAGCTATGGAAT+CGG | - | chr7.4:4715415-4715434 | None:intergenic | 45.0% | |
TCTGTTACTGCTGTGTGTTC+TGG | + | chr7.4:4713788-4713807 | MS.gene050788:CDS | 45.0% | |
TCTTTACCCAAGTGCTTTGC+AGG | - | chr7.4:4714854-4714873 | None:intergenic | 45.0% | |
TGTAGTGACCTGCGAATTAC+TGG | + | chr7.4:4718766-4718785 | MS.gene050788:CDS | 45.0% | |
TTAACCACACCAATGGTGGT+AGG | - | chr7.4:4715121-4715140 | None:intergenic | 45.0% | |
TTCCTCTGTCTCTAGTGATC+TGG | - | chr7.4:4714200-4714219 | None:intergenic | 45.0% | |
TTCGAGATGGTACGCCAAAT+GGG | - | chr7.4:4715962-4715981 | None:intergenic | 45.0% | |
TTTCACAAGGTAGCTGCCAT+GGG | + | chr7.4:4714821-4714840 | MS.gene050788:intron | 45.0% | |
TTTCTGAGCCAGTAATTCGC+AGG | - | chr7.4:4718777-4718796 | None:intergenic | 45.0% | |
! | AAGGTGGTTGCACTTGTTAG+CGG | + | chr7.4:4713473-4713492 | MS.gene050788:CDS | 45.0% |
! | AGCAAGGAGCGTAAATCAGA+TGG | + | chr7.4:4714164-4714183 | MS.gene050788:intron | 45.0% |
! | GCATGAGGGTATACTTCACA+TGG | + | chr7.4:4716920-4716939 | MS.gene050788:CDS | 45.0% |
! | GGGCATTGTAACTAGGAGTT+GGG | + | chr7.4:4716703-4716722 | MS.gene050788:intron | 45.0% |
! | TTGGATCCTGCAAAGCACTT+GGG | + | chr7.4:4714845-4714864 | MS.gene050788:CDS | 45.0% |
! | TTTGGATCCTGCAAAGCACT+TGG | + | chr7.4:4714844-4714863 | MS.gene050788:CDS | 45.0% |
!! | AGGGAATCTGCCTTTTGACT+TGG | - | chr7.4:4713769-4713788 | None:intergenic | 45.0% |
!! | AGGGCATTGTAACTAGGAGT+TGG | + | chr7.4:4716702-4716721 | MS.gene050788:intron | 45.0% |
!! | CTTCCTCAATCATTTTGGGG+AGG | + | chr7.4:4718301-4718320 | MS.gene050788:intron | 45.0% |
!! | GCATTTTTGGGCCTGAGTAA+AGG | + | chr7.4:4718392-4718411 | MS.gene050788:intron | 45.0% |
!! | GTGTCGAAAGTGTTTGTTCG+AGG | + | chr7.4:4713840-4713859 | MS.gene050788:CDS | 45.0% |
!! | TAGCAGCGTTTGATTTTGGC+TGG | + | chr7.4:4715841-4715860 | MS.gene050788:CDS | 45.0% |
!!! | AGCAGCGTTTGATTTTGGCT+GGG | + | chr7.4:4715842-4715861 | MS.gene050788:CDS | 45.0% |
!!! | CTGCCCCTGTTTGTTTTGTA+TGG | + | chr7.4:4718509-4718528 | MS.gene050788:intron | 45.0% |
AACTGGCATCAGATTCGCCA+AGG | - | chr7.4:4713558-4713577 | None:intergenic | 50.0% | |
AAGGACTCCTACAGGAGCTA+TGG | - | chr7.4:4715421-4715440 | None:intergenic | 50.0% | |
AAGGGATGAAGGACTCCTAC+AGG | - | chr7.4:4715429-4715448 | None:intergenic | 50.0% | |
ACTGATTGGGGTCAGCTACA+AGG | - | chr7.4:4714310-4714329 | None:intergenic | 50.0% | |
AGTTCCTACCACCATTGGTG+TGG | + | chr7.4:4715114-4715133 | MS.gene050788:intron | 50.0% | |
CTCCCTCCCCAAAATGATTG+AGG | - | chr7.4:4718307-4718326 | None:intergenic | 50.0% | |
CTTCGAGATGGTACGCCAAA+TGG | - | chr7.4:4715963-4715982 | None:intergenic | 50.0% | |
CTTTGCAGGATCCAAACCCA+TGG | - | chr7.4:4714840-4714859 | None:intergenic | 50.0% | |
GCCTCCACTGCAAAGATTCA+TGG | - | chr7.4:4716973-4716992 | None:intergenic | 50.0% | |
GGGGTTTCAAGCACGAAAGT+TGG | + | chr7.4:4717897-4717916 | MS.gene050788:CDS | 50.0% | |
GTAGCTATCGAGTTCGTCGA+CGG | - | chr7.4:4713588-4713607 | None:intergenic | 50.0% | |
TCCGATTCCATAGCTCCTGT+AGG | + | chr7.4:4715411-4715430 | MS.gene050788:CDS | 50.0% | |
TCGTCGACGGAATCATCAAC+TGG | - | chr7.4:4713575-4713594 | None:intergenic | 50.0% | |
TGCGTGTTTACCTGGCTGTA+TGG | - | chr7.4:4716116-4716135 | None:intergenic | 50.0% | |
TGGGATTGCCATTGTTCAGG+AGG | + | chr7.4:4713657-4713676 | MS.gene050788:CDS | 50.0% | |
TGGGCCTGAGTAAAGGAAGA+TGG | + | chr7.4:4718399-4718418 | MS.gene050788:intron | 50.0% | |
TGTAGGAGTCCTTCATCCCT+TGG | + | chr7.4:4715428-4715447 | MS.gene050788:CDS | 50.0% | |
TTGCAGGCAACCTTGCATGA+GGG | + | chr7.4:4716906-4716925 | MS.gene050788:intron | 50.0% | |
TTGTAGCTGACCCCAATCAG+TGG | + | chr7.4:4714309-4714328 | MS.gene050788:intron | 50.0% | |
! | ACTTCACATGGCTGGTCAAC+TGG | + | chr7.4:4716932-4716951 | MS.gene050788:CDS | 50.0% |
! | CTTCACATGGCTGGTCAACT+GGG | + | chr7.4:4716933-4716952 | MS.gene050788:CDS | 50.0% |
! | GAGGGTATACTTCACATGGC+TGG | + | chr7.4:4716924-4716943 | MS.gene050788:CDS | 50.0% |
! | TTCACATGGCTGGTCAACTG+GGG | + | chr7.4:4716934-4716953 | MS.gene050788:CDS | 50.0% |
AATCTTTGCAGTGGAGGCCC+TGG | + | chr7.4:4716975-4716994 | MS.gene050788:CDS | 55.0% | |
AGTTGGGCACCTAGCTGCAT+TGG | + | chr7.4:4716089-4716108 | MS.gene050788:CDS | 55.0% | |
ATCTTTGCAGTGGAGGCCCT+GGG | + | chr7.4:4716976-4716995 | MS.gene050788:CDS | 55.0% | |
CAAGGTAGCTGCCATGGGTT+TGG | + | chr7.4:4714826-4714845 | MS.gene050788:intron | 55.0% | |
CCTGTTCCAGTTCAACCCCA+GGG | - | chr7.4:4716995-4717014 | None:intergenic | 55.0% | |
CGCCAGATCACTAGAGACAG+AGG | + | chr7.4:4714195-4714214 | MS.gene050788:intron | 55.0% | |
CTGTATGGCCCAATGCAGCT+AGG | - | chr7.4:4716101-4716120 | None:intergenic | 55.0% | |
CTTGCAGGCAACCTTGCATG+AGG | + | chr7.4:4716905-4716924 | MS.gene050788:intron | 55.0% | |
GCTAGCAGTGCGTGTTTACC+TGG | - | chr7.4:4716124-4716143 | None:intergenic | 55.0% | |
GTTGGGCACCTAGCTGCATT+GGG | + | chr7.4:4716090-4716109 | MS.gene050788:CDS | 55.0% | |
! | GTGGTTGCACTTGTTAGCGG+CGG | + | chr7.4:4713476-4713495 | MS.gene050788:CDS | 55.0% |
!! | ACACAGGAGAGGTGCCCATT+TGG | + | chr7.4:4715945-4715964 | MS.gene050788:CDS | 55.0% |
!! | TTCCTGTTACAGGTGCTGGG+CGG | + | chr7.4:4718723-4718742 | MS.gene050788:CDS | 55.0% |
AACCGCCCAGCACCTGTAAC+AGG | - | chr7.4:4718728-4718747 | None:intergenic | 60.0% | |
CCCTGGGGTTGAACTGGAAC+AGG | + | chr7.4:4716992-4717011 | MS.gene050788:CDS | 60.0% | |
CTGCATTGGGCCATACAGCC+AGG | + | chr7.4:4716103-4716122 | MS.gene050788:CDS | 60.0% | |
GCCTGTTCCAGTTCAACCCC+AGG | - | chr7.4:4716996-4717015 | None:intergenic | 60.0% | |
TCGCCAAGGCGACGATCTGA+TGG | - | chr7.4:4713544-4713563 | None:intergenic | 60.0% | |
TCTTTGCAGTGGAGGCCCTG+GGG | + | chr7.4:4716977-4716996 | MS.gene050788:CDS | 60.0% | |
CGGCCATCAGATCGTCGCCT+TGG | + | chr7.4:4713538-4713557 | MS.gene050788:CDS | 65.0% | |
TGGAGGCCCTGGGGTTGAAC+TGG | + | chr7.4:4716986-4717005 | MS.gene050788:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.4 | gene | 4713470 | 4718802 | 4713470 | ID=MS.gene050788 |
chr7.4 | mRNA | 4713470 | 4718802 | 4713470 | ID=MS.gene050788.t1;Parent=MS.gene050788 |
chr7.4 | exon | 4713470 | 4713925 | 4713470 | ID=MS.gene050788.t1.exon1;Parent=MS.gene050788.t1 |
chr7.4 | CDS | 4713470 | 4713925 | 4713470 | ID=cds.MS.gene050788.t1;Parent=MS.gene050788.t1 |
chr7.4 | exon | 4714404 | 4714436 | 4714404 | ID=MS.gene050788.t1.exon2;Parent=MS.gene050788.t1 |
chr7.4 | CDS | 4714404 | 4714436 | 4714404 | ID=cds.MS.gene050788.t1;Parent=MS.gene050788.t1 |
chr7.4 | exon | 4714830 | 4714912 | 4714830 | ID=MS.gene050788.t1.exon3;Parent=MS.gene050788.t1 |
chr7.4 | CDS | 4714830 | 4714912 | 4714830 | ID=cds.MS.gene050788.t1;Parent=MS.gene050788.t1 |
chr7.4 | exon | 4715038 | 4715110 | 4715038 | ID=MS.gene050788.t1.exon4;Parent=MS.gene050788.t1 |
chr7.4 | CDS | 4715038 | 4715110 | 4715038 | ID=cds.MS.gene050788.t1;Parent=MS.gene050788.t1 |
chr7.4 | exon | 4715366 | 4715696 | 4715366 | ID=MS.gene050788.t1.exon5;Parent=MS.gene050788.t1 |
chr7.4 | CDS | 4715366 | 4715696 | 4715366 | ID=cds.MS.gene050788.t1;Parent=MS.gene050788.t1 |
chr7.4 | exon | 4715790 | 4716124 | 4715790 | ID=MS.gene050788.t1.exon6;Parent=MS.gene050788.t1 |
chr7.4 | CDS | 4715790 | 4716124 | 4715790 | ID=cds.MS.gene050788.t1;Parent=MS.gene050788.t1 |
chr7.4 | exon | 4716912 | 4717249 | 4716912 | ID=MS.gene050788.t1.exon7;Parent=MS.gene050788.t1 |
chr7.4 | CDS | 4716912 | 4717249 | 4716912 | ID=cds.MS.gene050788.t1;Parent=MS.gene050788.t1 |
chr7.4 | exon | 4717796 | 4718153 | 4717796 | ID=MS.gene050788.t1.exon8;Parent=MS.gene050788.t1 |
chr7.4 | CDS | 4717796 | 4718153 | 4717796 | ID=cds.MS.gene050788.t1;Parent=MS.gene050788.t1 |
chr7.4 | exon | 4718587 | 4718802 | 4718587 | ID=MS.gene050788.t1.exon9;Parent=MS.gene050788.t1 |
chr7.4 | CDS | 4718587 | 4718802 | 4718587 | ID=cds.MS.gene050788.t1;Parent=MS.gene050788.t1 |
Gene Sequence |
Protein sequence |