AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene88592


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene88592.t1 MTR_1g038793 96.410 1170 41 1 3 1172 1 1169 0.0 2336
MS.gene88592.t1 MTR_1g114540 81.733 1177 192 4 1 1172 1 1159 0.0 1974
MS.gene88592.t1 MTR_2g081070 54.007 1198 457 15 15 1168 53 1200 0.0 1219
MS.gene88592.t1 MTR_8g464480 53.959 1086 448 12 115 1170 114 1177 0.0 1129
MS.gene88592.t1 MTR_3g105200 43.468 842 428 16 122 938 4 822 0.0 655
MS.gene88592.t1 MTR_3g105200 43.468 842 428 16 122 938 4 822 0.0 655
MS.gene88592.t1 MTR_1g015620 43.932 824 417 19 136 938 18 817 0.0 645
MS.gene88592.t1 MTR_4g125690 43.961 828 428 16 128 937 14 823 0.0 645
MS.gene88592.t1 MTR_1g037500 42.702 829 438 16 128 937 14 824 0.0 637
MS.gene88592.t1 MTR_7g115430 42.461 829 441 16 128 938 14 824 0.0 635
MS.gene88592.t1 MTR_1g080600 42.163 823 441 15 128 933 14 818 0.0 626
MS.gene88592.t1 MTR_7g099290 39.209 936 514 19 128 1026 14 931 0.0 625
MS.gene88592.t1 MTR_1g070280 41.417 833 445 17 128 938 14 825 0.0 613
MS.gene88592.t1 MTR_1g070280 41.367 834 446 17 128 939 14 826 0.0 612
MS.gene88592.t1 MTR_1g070280 41.417 833 445 17 128 938 14 825 0.0 611
MS.gene88592.t1 MTR_1g070400 41.176 833 447 16 128 939 12 822 0.0 608
MS.gene88592.t1 MTR_2g062660 40.290 829 443 16 126 937 12 805 0.0 596
MS.gene88592.t1 MTR_1g070280 41.159 656 352 13 296 938 1 635 9.83e-154 483
MS.gene88592.t1 MTR_1g023610 75.424 236 17 2 943 1164 2 210 1.11e-108 339
MS.gene88592.t1 MTR_1g069290 32.366 448 263 12 603 1026 1 432 1.13e-51 198
MS.gene88592.t1 MTR_6g007010 47.321 112 45 1 122 233 15 112 2.04e-30 116
MS.gene88592.t1 MTR_7g026950 90.385 52 5 0 495 546 34 85 5.16e-27 107
MS.gene88592.t1 MTR_1g069305 41.259 143 78 3 412 550 1 141 3.50e-24 100
MS.gene88592.t1 MTR_2g066850 40.179 112 66 1 330 441 578 688 9.50e-19 93.2
MS.gene88592.t1 MTR_1g108410 42.254 71 38 2 178 245 1 71 1.32e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene88592.t1 AT3G19960 75.932 1180 257 11 3 1170 1 1165 0.0 1819
MS.gene88592.t1 AT3G19960 75.932 1180 257 11 3 1170 1 1165 0.0 1819
MS.gene88592.t1 AT3G19960 75.932 1180 257 11 3 1170 1 1165 0.0 1819
MS.gene88592.t1 AT1G50360 73.787 1175 278 9 3 1170 1 1152 0.0 1767
MS.gene88592.t1 AT3G19960 71.299 1216 260 16 3 1170 1 1175 0.0 1699
MS.gene88592.t1 AT3G19960 77.514 885 182 6 3 882 1 873 0.0 1407
MS.gene88592.t1 AT5G54280 55.393 1094 429 10 110 1166 148 1219 0.0 1213
MS.gene88592.t1 AT5G54280 56.042 1051 402 11 153 1166 2 1029 0.0 1169
MS.gene88592.t1 AT4G27370 53.882 1082 437 13 107 1167 95 1135 0.0 1130
MS.gene88592.t1 AT4G27370 53.882 1082 437 13 107 1167 95 1135 0.0 1130
MS.gene88592.t1 AT4G27370 53.604 1082 440 13 107 1167 95 1135 0.0 1124
MS.gene88592.t1 AT4G27370 53.426 1080 443 12 107 1167 95 1133 0.0 1118
MS.gene88592.t1 AT5G43900 42.377 833 435 17 128 938 14 823 0.0 647
MS.gene88592.t1 AT5G43900 42.377 833 435 17 128 938 74 883 0.0 646
MS.gene88592.t1 AT5G43900 42.410 830 436 17 128 938 74 880 0.0 641
MS.gene88592.t1 AT1G04600 41.908 828 444 16 128 937 14 822 0.0 639
MS.gene88592.t1 AT1G08730 39.601 952 501 20 128 1033 14 937 0.0 639
MS.gene88592.t1 AT1G54560 39.537 951 503 20 128 1033 17 940 0.0 638
MS.gene88592.t1 AT2G33240 41.302 845 457 17 113 937 14 839 0.0 637
MS.gene88592.t1 AT2G33240 41.302 845 457 17 113 937 14 839 0.0 637
MS.gene88592.t1 AT2G33240 41.687 830 447 16 126 937 11 821 0.0 637
MS.gene88592.t1 AT1G08730 39.601 952 501 20 128 1033 22 945 0.0 637
MS.gene88592.t1 AT1G54560 39.537 951 503 20 128 1033 14 937 0.0 637
MS.gene88592.t1 AT2G33240 41.302 845 457 17 113 937 19 844 0.0 637
MS.gene88592.t1 AT2G33240 41.302 845 457 17 113 937 14 839 0.0 637
MS.gene88592.t1 AT2G33240 41.302 845 457 17 113 937 14 839 0.0 637
MS.gene88592.t1 AT2G33240 41.302 845 457 17 113 937 14 839 0.0 637
MS.gene88592.t1 AT4G33200 42.169 830 433 15 128 933 18 824 0.0 632
MS.gene88592.t1 AT4G33200 42.169 830 433 15 128 933 18 824 0.0 631
MS.gene88592.t1 AT4G33200 42.169 830 433 15 128 933 18 824 0.0 631
MS.gene88592.t1 AT1G17580 42.978 826 437 14 128 937 13 820 0.0 631
MS.gene88592.t1 AT4G33200 42.169 830 433 15 128 933 18 824 0.0 631
MS.gene88592.t1 AT1G04160 39.228 933 512 22 128 1031 14 920 0.0 629
MS.gene88592.t1 AT1G04160 39.228 933 512 22 128 1031 14 920 0.0 629
MS.gene88592.t1 AT4G28710 40.682 880 465 20 128 978 13 864 0.0 625
MS.gene88592.t1 AT2G31900 38.289 935 524 19 128 1027 14 930 0.0 624
MS.gene88592.t1 AT2G31900 38.289 935 524 19 128 1027 14 930 0.0 624
MS.gene88592.t1 AT2G31900 38.289 935 524 19 128 1027 14 930 0.0 624
MS.gene88592.t1 AT5G20490 38.678 923 518 19 128 1025 13 912 0.0 623
MS.gene88592.t1 AT5G20490 38.678 923 518 19 128 1025 14 913 0.0 623
MS.gene88592.t1 AT2G20290 41.304 828 447 18 128 937 13 819 0.0 619
MS.gene88592.t1 AT2G20290 41.304 828 447 18 128 937 13 819 0.0 619
MS.gene88592.t1 AT2G20290 41.304 828 447 18 128 937 13 819 0.0 619
MS.gene88592.t1 AT2G20290 41.304 828 447 18 128 937 24 830 0.0 618
MS.gene88592.t1 AT5G20490 39.655 870 478 18 180 1025 1 847 0.0 608
MS.gene88592.t1 AT3G58160 38.394 909 504 19 128 1003 12 897 0.0 593
MS.gene88592.t1 AT3G58160 38.394 909 504 19 128 1003 12 897 0.0 593
MS.gene88592.t1 AT3G58160 38.394 909 504 19 128 1003 12 897 0.0 593
MS.gene88592.t1 AT3G58160 38.394 909 504 19 128 1003 12 897 0.0 591
MS.gene88592.t1 AT3G58160 38.394 909 504 19 128 1003 12 897 0.0 591
MS.gene88592.t1 AT2G31900 38.902 820 452 16 239 1027 14 815 3.53e-177 560
MS.gene88592.t1 AT2G31900 35.269 689 402 15 365 1027 2 672 5.53e-118 397
MS.gene88592.t1 AT1G42680 97.436 78 2 0 265 342 56 133 6.42e-44 157
MS.gene88592.t1 AT2G33240 33.742 326 196 7 617 937 2 312 1.56e-42 170

Find 247 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCTTGTTCCGTTGCTTTCT+TGG 0.132641 1.4:-23425297 None:intergenic
AATCAGTTTCAGTGTCTTCT+AGG 0.239339 1.4:+23413895 MS.gene88592:CDS
ATATGATACAACTGGGTTTC+TGG 0.249338 1.4:+23422338 MS.gene88592:CDS
TTCTCCTTTGAAACATGATT+TGG 0.249836 1.4:-23422081 None:intergenic
AGCAATTGTTATTCAATTAC+TGG 0.252497 1.4:+23419994 MS.gene88592:CDS
CTATGCTTGCTGCAGTATTA+TGG 0.255022 1.4:+23420233 MS.gene88592:CDS
TATCTATTCATGCAGTTATT+CGG 0.260684 1.4:+23423769 MS.gene88592:intron
TTCAGGCGATTGGAGATTAT+TGG 0.263077 1.4:-23423069 None:intergenic
ATCTATTCATGCAGTTATTC+GGG 0.269813 1.4:+23423770 MS.gene88592:intron
AGTCCTTGTTCATATGTTTC+AGG 0.283077 1.4:-23423086 None:intergenic
TTGTTGCAACACTTAGCTTT+TGG 0.298783 1.4:-23422509 None:intergenic
GACAAAAGCGGGGCCTGTTT+TGG 0.304716 1.4:+23416145 MS.gene88592:intron
TAAATGCTGTTTAAGCTTGT+TGG 0.305362 1.4:-23422054 None:intergenic
AGCTACTCTTTGCAGTCATT+CGG 0.305391 1.4:+23424741 MS.gene88592:intron
TTCAACTTCCAAATGGGAAT+TGG 0.305917 1.4:+23415734 MS.gene88592:CDS
GAGCAAAGGAGTCAAGTATT+TGG 0.309721 1.4:+23425367 MS.gene88592:CDS
TATACCTTCTGGCGAACTTT+TGG 0.329124 1.4:-23423190 None:intergenic
ACGTGTCCAAAGTTGCTTTA+GGG 0.333334 1.4:+23423613 MS.gene88592:CDS
CCTGTGATTGTGTCAACTTT+TGG 0.335642 1.4:-23420730 None:intergenic
GCTACTCTTTGCAGTCATTC+GGG 0.335669 1.4:+23424742 MS.gene88592:intron
CTGGGTTTCTGGAGAAGAAT+AGG 0.339086 1.4:+23422349 MS.gene88592:CDS
TCTGGTCAAGTCATCTTTCC+TGG 0.344259 1.4:+23424979 MS.gene88592:CDS
AGAAGATGCTCAGGAGATAT+TGG 0.350589 1.4:+23424776 MS.gene88592:CDS
TTCTGTTGCTTTACGCTTGT+AGG 0.350973 1.4:-23416222 None:intergenic
AATGTCAAATCTGTGCCATT+TGG 0.357660 1.4:-23422029 None:intergenic
TATATTCATGCCTGTTTGAT+TGG 0.357775 1.4:+23420997 MS.gene88592:CDS
TACGTGTCCAAAGTTGCTTT+AGG 0.363056 1.4:+23423612 MS.gene88592:CDS
GAGATACACTTCAGTGAAAC+TGG 0.363178 1.4:+23416965 MS.gene88592:CDS
TTCTTAGTTGAGGTGAAATC+TGG 0.366000 1.4:+23425403 MS.gene88592:CDS
TCAGGCGATTGGAGATTATT+GGG 0.369444 1.4:-23423068 None:intergenic
AAAAGTGAAACAAGACTGTT+TGG 0.373096 1.4:+23415921 MS.gene88592:CDS
GCTGAGGTGCTGTGGGGTGC+TGG 0.377030 1.4:+23423121 MS.gene88592:CDS
TTACCAAAGGCTTCGAGTAT+TGG 0.379253 1.4:-23416770 None:intergenic
ATCAGTATTCTAGATATATA+TGG 0.381169 1.4:+23421077 MS.gene88592:CDS
TTGCTGCAGTATTATGGTTC+GGG 0.381557 1.4:+23420239 MS.gene88592:CDS
ACAAGAAATCGTACCCTTCA+TGG 0.383555 1.4:+23423584 MS.gene88592:CDS
ACCATCTGTTCTCGTATTGT+TGG 0.384079 1.4:-23425084 None:intergenic
GCAAATCCTGATATTCTTGA+TGG 0.386036 1.4:+23415949 MS.gene88592:CDS
TCCACTCCATCAAGAATATC+AGG 0.388008 1.4:-23415955 None:intergenic
TTCATGCCTGTTTGATTGGT+TGG 0.393840 1.4:+23421001 MS.gene88592:CDS
TCAACTTCCAAATGGGAATT+GGG 0.395732 1.4:+23415735 MS.gene88592:CDS
TTCAAGAAAGTTCCTCTGTA+TGG 0.397705 1.4:+23416182 MS.gene88592:CDS
TAGGTCACATATGATACAAC+TGG 0.398041 1.4:+23422330 MS.gene88592:intron
ATGTCAAATCTGTGCCATTT+GGG 0.400716 1.4:-23422028 None:intergenic
AGCCTTCTAAGTTCTTGATC+TGG 0.403641 1.4:-23425448 None:intergenic
AACAGAGTCGGATGAGATTC+TGG 0.404107 1.4:+23424961 MS.gene88592:CDS
GGATTTACAGCAACCAAAAC+AGG 0.405144 1.4:-23416158 None:intergenic
AGTACCTTCTTTGAAACATA+AGG 0.407016 1.4:-23413942 None:intergenic
CAGTGTCTTCTAGGGAATCT+AGG 0.407646 1.4:+23413904 MS.gene88592:CDS
CTTGCTGCAGTATTATGGTT+CGG 0.409162 1.4:+23420238 MS.gene88592:CDS
AGATGTTTGAAGCTTGGAAA+AGG 0.409539 1.4:+23425476 MS.gene88592:CDS
AGTTACCTCGTATCATTTCT+CGG 0.410198 1.4:-23416280 None:intergenic
TTAATCAGTCTATAATTATA+AGG 0.413289 1.4:+23416419 MS.gene88592:CDS
GTGCTGTGGGGTGCTGGAAG+TGG 0.413556 1.4:+23423127 MS.gene88592:CDS
GAAGCTTGGAAAAGGGATTA+CGG 0.413997 1.4:+23425484 MS.gene88592:CDS
AATTGATGCAAGAGATGCTT+TGG 0.416021 1.4:+23420965 MS.gene88592:CDS
TTCCACGTCGCCGAATTGAT+TGG 0.417732 1.4:+23420638 MS.gene88592:CDS
TCCTGGCTGAATTGCAGCGC+CGG 0.418583 1.4:+23424996 MS.gene88592:CDS
AAGCTTGGAAAAGGGATTAC+GGG 0.418662 1.4:+23425485 MS.gene88592:CDS
CTTGGTTTCAACTTCCAAAT+GGG 0.424814 1.4:+23415728 MS.gene88592:CDS
ATGCAGTACTTGGCTGCTCT+TGG 0.426553 1.4:+23416707 MS.gene88592:CDS
GCTGCTCTTGGAGGTGGAAG+TGG 0.427318 1.4:+23416719 MS.gene88592:CDS
GGATGGAATCCAAGTGCAAT+AGG 0.428070 1.4:-23422374 None:intergenic
ATTTATCTTACCTTCCCATC+TGG 0.428801 1.4:-23415808 None:intergenic
ATCCAGATCAAGAACTTAGA+AGG 0.433146 1.4:+23425446 MS.gene88592:CDS
TCAACTCGCAAAATGAAAGT+TGG 0.434007 1.4:+23420692 MS.gene88592:CDS
CTTGATCTTCTTTACTGATG+TGG 0.434607 1.4:-23420198 None:intergenic
TACTTGGCTGCTCTTGGAGG+TGG 0.436142 1.4:+23416713 MS.gene88592:CDS
CGTTCCCTCAAGAAGCTTCA+AGG 0.436510 1.4:+23423650 MS.gene88592:CDS
ATTGTTGGATACGTTGGTTA+AGG 0.437011 1.4:-23425069 None:intergenic
TTTCTCTCTCAGAGCAGCTT+CGG 0.438499 1.4:-23425029 None:intergenic
ATCTGTGCCATTTGGGAAAG+TGG 0.439231 1.4:-23422021 None:intergenic
GGTAACCCCTAAAGCAACTT+TGG 0.446364 1.4:-23423619 None:intergenic
TTCTCAATTTACCGTCTCCA+TGG 0.447527 1.4:-23413692 None:intergenic
ATTGCAGCGCCGGGTACTTA+AGG 0.449090 1.4:+23425006 MS.gene88592:CDS
CAAGATCGTGCCGGTGGCAT+GGG 0.449615 1.4:+23413771 MS.gene88592:CDS
ATCTATTGTTGATGAAGGCT+TGG 0.449910 1.4:+23413851 MS.gene88592:CDS
CTGGAGAGAAGGAAGAATCT+TGG 0.451447 1.4:-23413604 None:intergenic
TCAAGATCGTGCCGGTGGCA+TGG 0.454589 1.4:+23413770 MS.gene88592:CDS
CAACTCGCAAAATGAAAGTT+GGG 0.454859 1.4:+23420693 MS.gene88592:CDS
TCTTGGTTTCAACTTCCAAA+TGG 0.455482 1.4:+23415727 MS.gene88592:CDS
CAGTACTTGGCTGCTCTTGG+AGG 0.456613 1.4:+23416710 MS.gene88592:CDS
GCCAACTCCCAATTCCCATT+TGG 0.456747 1.4:-23415742 None:intergenic
GTTCATATGTTTCAGGCGAT+TGG 0.459394 1.4:-23423079 None:intergenic
TAAAACAGATGTTTGAAGCT+TGG 0.461128 1.4:+23425470 MS.gene88592:CDS
CCAGGAGGCAACGATTTGAT+AGG 0.462551 1.4:-23413627 None:intergenic
AATCTGTATTATTAGAAGAC+AGG 0.463246 1.4:+23413826 MS.gene88592:CDS
TCCTCCTTGAAGCTTCTTGA+GGG 0.467984 1.4:-23423654 None:intergenic
GATGTTTGAAGCTTGGAAAA+GGG 0.469417 1.4:+23425477 MS.gene88592:CDS
TAGAAGACACTGAAACTGAT+TGG 0.470002 1.4:-23413893 None:intergenic
ATGGTAGTAAGAAACAGAAC+AGG 0.470194 1.4:+23423873 MS.gene88592:CDS
AACGTCACAGCCAATCAATT+CGG 0.471149 1.4:-23420648 None:intergenic
CCTTGATAATGCTGCATCAC+AGG 0.473663 1.4:+23423351 MS.gene88592:CDS
AATCCAATACTCGAAGCCTT+TGG 0.473702 1.4:+23416767 MS.gene88592:CDS
GTTCAACCAACCAATCAAAC+AGG 0.475209 1.4:-23421007 None:intergenic
TATATATTTGCAGAGACCAC+TGG 0.475527 1.4:+23421971 MS.gene88592:intron
AACACCTTATGTTTCAAAGA+AGG 0.476863 1.4:+23413938 MS.gene88592:CDS
GCGATGAGCGTGATTACAGC+TGG 0.477040 1.4:+23425251 MS.gene88592:CDS
TAATCTGACCCGTGATGTAA+TGG 0.477375 1.4:+23413665 MS.gene88592:CDS
GCTACAGTTGTCATACAATC+AGG 0.478266 1.4:+23423909 MS.gene88592:CDS
TATTTCAGAAACTCCAGTCT+TGG 0.480465 1.4:+23415710 MS.gene88592:intron
AAAGATAGCAATGCAGTACT+TGG 0.481751 1.4:+23416697 MS.gene88592:CDS
ATATGAGATGCAAATATTTG+AGG 0.483719 1.4:-23422426 None:intergenic
TTTCTGCCACACGTCTTCCA+TGG 0.484178 1.4:-23425131 None:intergenic
TAAATTGAGAAGCAGTGGTT+TGG 0.486686 1.4:+23413704 MS.gene88592:CDS
TTCAGTGGTGAGAGTGGAGC+TGG 0.489050 1.4:+23416659 MS.gene88592:intron
TGCAGTCATTCGGGGATGGT+TGG 0.490822 1.4:+23424751 MS.gene88592:intron
ATATTCAAGATGGCATTGAC+TGG 0.492599 1.4:+23421446 MS.gene88592:CDS
AATTCCAAATCATGTTTCAA+AGG 0.492600 1.4:+23422077 MS.gene88592:CDS
AAGTGTTGCAACAAAATTCA+AGG 0.492608 1.4:+23422518 MS.gene88592:CDS
TTTACTGTGTGTCATTATGC+TGG 0.494386 1.4:+23422116 MS.gene88592:CDS
AGGGAATCTATTGTTGATGA+AGG 0.495058 1.4:+23413846 MS.gene88592:CDS
TGTGCAAATCAGACAAAAGC+GGG 0.497041 1.4:+23416134 MS.gene88592:intron
AGACATTCTTGTTGGAAAGC+CGG 0.497595 1.4:-23423165 None:intergenic
TTTCACCTCAACTAAGAACT+TGG 0.498620 1.4:-23425398 None:intergenic
CCTATCAAATCGTTGCCTCC+TGG 0.499078 1.4:+23413627 MS.gene88592:CDS
GTTGGTCCTTTACACAAGTC+AGG 0.499327 1.4:+23422474 MS.gene88592:CDS
AATCACTTGCTGTTGGCAAA+AGG 0.500518 1.4:+23421039 MS.gene88592:CDS
AATGAGGACATAGCGTATAG+TGG 0.502355 1.4:+23413801 MS.gene88592:CDS
TTGAGAAGCAGTGGTTTGGT+TGG 0.502677 1.4:+23413708 MS.gene88592:CDS
CCTGGCTGAATTGCAGCGCC+GGG 0.504834 1.4:+23424997 MS.gene88592:CDS
TCATTTATTCAAGTTAGAGC+AGG 0.505088 1.4:+23421291 MS.gene88592:CDS
GAAGAGTCCACTTTCCCAAA+TGG 0.507152 1.4:+23422014 MS.gene88592:CDS
TAGAATACTGATTGATCTGC+CGG 0.510100 1.4:-23421066 None:intergenic
ACCTCGTATCATTTCTCGGA+TGG 0.512201 1.4:-23416276 None:intergenic
TGGGTTTCTGGAGAAGAATA+GGG 0.514065 1.4:+23422350 MS.gene88592:CDS
ATCAGTTTCAGTGTCTTCTA+GGG 0.514515 1.4:+23413896 MS.gene88592:CDS
TCTTTGCAGTCATTCGGGGA+TGG 0.516373 1.4:+23424747 MS.gene88592:intron
TCCAAATGGGAATTGGGAGT+TGG 0.519820 1.4:+23415741 MS.gene88592:CDS
TGTTCAAGCTGTTGAAAATG+AGG 0.520400 1.4:+23420297 MS.gene88592:CDS
CAGCTTCGGCCTTAAGTACC+CGG 0.521216 1.4:-23425015 None:intergenic
ATAAATAAATCACTTGCTGT+TGG 0.521415 1.4:+23421032 MS.gene88592:CDS
TACAGAGGAACTTTCTTGAA+AGG 0.523489 1.4:-23416179 None:intergenic
TTGTGTAAAGGACCAACTAC+TGG 0.524092 1.4:-23422468 None:intergenic
TTCCTCCTTGAAGCTTCTTG+AGG 0.525346 1.4:-23423655 None:intergenic
TTGGAAGTTGAAACCAAGAC+TGG 0.525942 1.4:-23415723 None:intergenic
AGCAAGGCTCTTCTTAGCAA+TGG 0.526141 1.4:-23425182 None:intergenic
AGATGGCATTGACTGGGCTA+AGG 0.526228 1.4:+23421453 MS.gene88592:CDS
TACAACAGCTGAGGTGCTGT+GGG 0.526882 1.4:+23423114 MS.gene88592:CDS
TCTCAATTTACCGTCTCCAT+GGG 0.527570 1.4:-23413691 None:intergenic
TCTCGTATTGTTGGATACGT+TGG 0.528437 1.4:-23425075 None:intergenic
CGTGTCCAAAGTTGCTTTAG+GGG 0.528549 1.4:+23423614 MS.gene88592:CDS
GAATAGGGACCTATTGCACT+TGG 0.529815 1.4:+23422365 MS.gene88592:CDS
GTGGTTCGAATATCAAGATC+CGG 0.531183 1.4:+23423146 MS.gene88592:CDS
AGACACTGAAACTGATTGGA+AGG 0.532173 1.4:-23413889 None:intergenic
TAGCCAACTTGAAACATCTC+AGG 0.533991 1.4:-23423421 None:intergenic
CAGTAATTACCTCGAAGAGC+TGG 0.534698 1.4:-23417329 None:intergenic
TGGTTGGTCAGAAGATGCTC+AGG 0.535026 1.4:+23424767 MS.gene88592:CDS
ATGGGTTTCCATTACATCAC+GGG 0.535138 1.4:-23413673 None:intergenic
CTAGTTTGAGCGTTATAAGT+CGG 0.536731 1.4:+23425329 MS.gene88592:CDS
TCGAAGAGCTGGTGGTGCAC+CGG 0.537441 1.4:-23417318 None:intergenic
AAGTTGATTATAAATAAACT+TGG 0.540599 1.4:+23425526 MS.gene88592:CDS
CCCGGCGCTGCAATTCAGCC+AGG 0.542018 1.4:-23424997 None:intergenic
CCTGTGATGCAGCATTATCA+AGG 0.543949 1.4:-23423351 None:intergenic
AGAGTAGTTCAATGCAATGA+AGG 0.545560 1.4:+23417260 MS.gene88592:CDS
TATTTCATTGCCAGATGGGA+AGG 0.546517 1.4:+23415798 MS.gene88592:CDS
ATTGAAACTGAAACACTAAG+TGG 0.546717 1.4:-23423376 None:intergenic
GCCCCACCTGACTTGTGTAA+AGG 0.546790 1.4:-23422480 None:intergenic
GCGTGATTACAGCTGGGATG+TGG 0.546814 1.4:+23425258 MS.gene88592:CDS
CTGTTATTTCATTGCCAGAT+GGG 0.546839 1.4:+23415794 MS.gene88592:CDS
AGCATAATGACACACAGTAA+AGG 0.547082 1.4:-23422114 None:intergenic
TCTTGAGGGAACGACGAGCT+TGG 0.550989 1.4:-23423640 None:intergenic
GAGTAGTTCAATGCAATGAA+GGG 0.551191 1.4:+23417261 MS.gene88592:CDS
CAGGCATGAATATATAGACT+TGG 0.556953 1.4:-23420988 None:intergenic
CGAGTTGAAGATGAAATCCA+TGG 0.558151 1.4:+23425114 MS.gene88592:CDS
GCTGTTGGCAAAAGGCGTAC+CGG 0.559656 1.4:+23421047 MS.gene88592:CDS
TCTCTAAGCGTTGCATCAGT+TGG 0.563355 1.4:-23423013 None:intergenic
GGACACGTAAGATGCCATGA+AGG 0.564278 1.4:-23423598 None:intergenic
CATGGGTTTCCATTACATCA+CGG 0.564873 1.4:-23413674 None:intergenic
GAGGCAACGATTTGATAGGC+TGG 0.565658 1.4:-23413623 None:intergenic
CTACAACAGCTGAGGTGCTG+TGG 0.566317 1.4:+23423113 MS.gene88592:CDS
TTGCCTGAGATGTTTCAAGT+TGG 0.567249 1.4:+23423418 MS.gene88592:CDS
GGTGCACCACCAGCTCTTCG+AGG 0.567800 1.4:+23417320 MS.gene88592:CDS
GTCCTTTACACAAGTCAGGT+GGG 0.568422 1.4:+23422478 MS.gene88592:CDS
TTCGAAACACGGGGACATGA+AGG 0.569787 1.4:+23424802 MS.gene88592:CDS
GAAACAAGACTGTTTGGTAT+CGG 0.570221 1.4:+23415927 MS.gene88592:CDS
TACATATTCAGTGGTGAGAG+TGG 0.570600 1.4:+23416653 MS.gene88592:intron
TTTATTCAAGTTAGAGCAGG+AGG 0.570875 1.4:+23421294 MS.gene88592:CDS
TCCTGATATTCTTGATGGAG+TGG 0.572931 1.4:+23415954 MS.gene88592:CDS
ATATATTTGCAGAGACCACT+GGG 0.572996 1.4:+23421972 MS.gene88592:intron
GACGGTAAATTGAGAAGCAG+TGG 0.577585 1.4:+23413699 MS.gene88592:CDS
ATCTGTATTATTAGAAGACA+GGG 0.577757 1.4:+23413827 MS.gene88592:CDS
TTCAATGCAATGAAGGGGAA+AGG 0.582691 1.4:+23417267 MS.gene88592:CDS
TCTGTTATTTCATTGCCAGA+TGG 0.583506 1.4:+23415793 MS.gene88592:CDS
GACACTGAAACTGATTGGAA+GGG 0.584139 1.4:-23413888 None:intergenic
AATGACACACAGTAAAGGCT+TGG 0.584534 1.4:-23422109 None:intergenic
TCCTTTACACAAGTCAGGTG+GGG 0.589962 1.4:+23422479 MS.gene88592:CDS
CAGTCTGAAAAGCCAGTAGT+TGG 0.590072 1.4:+23422456 MS.gene88592:CDS
TCGGGGACAGAAAACGAGAA+AGG 0.591397 1.4:+23423788 MS.gene88592:CDS
TCCAACAATACGAGAACAGA+TGG 0.591982 1.4:+23425083 MS.gene88592:CDS
ACACTGAAACTGATTGGAAG+GGG 0.593225 1.4:-23413887 None:intergenic
GGGATGTGGGAAGTAATCAC+AGG 0.597514 1.4:+23425272 MS.gene88592:CDS
TTAAATAACTAAGTTGCATG+AGG 0.599721 1.4:-23415981 None:intergenic
ATTGAAAAGACCCATGCCAC+CGG 0.600062 1.4:-23413781 None:intergenic
GAAACTGATTGGAAGGGGAG+AGG 0.601434 1.4:-23413882 None:intergenic
CTCACCAAAAGTTCGCCAGA+AGG 0.601748 1.4:+23423186 MS.gene88592:CDS
GGTCCTTTACACAAGTCAGG+TGG 0.602904 1.4:+23422477 MS.gene88592:CDS
TATTCAAGATGGCATTGACT+GGG 0.603541 1.4:+23421447 MS.gene88592:CDS
GTTCAAGCTGTTGAAAATGA+GGG 0.603640 1.4:+23420298 MS.gene88592:CDS
AGCCAATCAATTCGGCGACG+TGG 0.604090 1.4:-23420640 None:intergenic
CTACTCTTTGCAGTCATTCG+GGG 0.606699 1.4:+23424743 MS.gene88592:intron
CCAAAAGTTGACACAATCAC+AGG 0.607424 1.4:+23420730 MS.gene88592:CDS
TAATTACCTCGAAGAGCTGG+TGG 0.608759 1.4:-23417326 None:intergenic
GGGGAAGAAGGAATAGTACA+AGG 0.612062 1.4:+23425590 MS.gene88592:CDS
CTGCTATTATTATACAGAAG+CGG 0.612850 1.4:+23423841 MS.gene88592:CDS
GATTTGATAGGCTGGAGAGA+AGG 0.616126 1.4:-23413615 None:intergenic
CGTGATTACAGCTGGGATGT+GGG 0.618545 1.4:+23425259 MS.gene88592:CDS
GGCTCTTCTTAGCAATGGAG+AGG 0.619567 1.4:-23425177 None:intergenic
TTACCGTTAACCTTAAAACC+AGG 0.620105 1.4:-23413645 None:intergenic
GAAGAAGCTCAAGATCGTGC+CGG 0.620942 1.4:+23413762 MS.gene88592:CDS
TGCTCTGAGAGAGAAAGATG+AGG 0.621017 1.4:+23425036 MS.gene88592:CDS
TGTAAATCGTATAAAACTGA+CGG 0.621432 1.4:-23416009 None:intergenic
CTGTAATTGCATATACATGA+GGG 0.622923 1.4:-23416247 None:intergenic
TTGCTGAAGAATTTGAGCAA+AGG 0.623033 1.4:+23425353 MS.gene88592:CDS
CGATGAGCGTGATTACAGCT+GGG 0.623055 1.4:+23425252 MS.gene88592:CDS
AGAAGAATTTCGCATAGTCA+TGG 0.624672 1.4:+23420029 MS.gene88592:CDS
GTAATGGAAACCCATGGAGA+CGG 0.624776 1.4:+23413681 MS.gene88592:CDS
AGTAGTTCAATGCAATGAAG+GGG 0.626214 1.4:+23417262 MS.gene88592:CDS
TGTCAGAGTCATCAATAGCA+AGG 0.628036 1.4:-23425198 None:intergenic
TCTATTCATGCAGTTATTCG+GGG 0.631165 1.4:+23423771 MS.gene88592:intron
GCATGACGATAGAAGTTGGA+TGG 0.631274 1.4:-23422391 None:intergenic
ATGTGCATGACGATAGAAGT+TGG 0.631426 1.4:-23422395 None:intergenic
CGTGATGTAATGGAAACCCA+TGG 0.636259 1.4:+23413675 MS.gene88592:CDS
ACAGAAGCGGACAAAAGCAA+TGG 0.637000 1.4:+23423854 MS.gene88592:CDS
GAAGCTCAAGATCGTGCCGG+TGG 0.637340 1.4:+23413765 MS.gene88592:CDS
GACACGTAAGATGCCATGAA+GGG 0.641002 1.4:-23423597 None:intergenic
TCCGAAACAGACAACAGAGT+CGG 0.642886 1.4:+23424949 MS.gene88592:intron
TGATGCCAAGTTCTTAGTTG+AGG 0.643542 1.4:+23425393 MS.gene88592:CDS
GACTTGTACTACAACAGCTG+AGG 0.656329 1.4:+23423105 MS.gene88592:CDS
CACAGGCGCCAAGAAAGCAA+CGG 0.657225 1.4:+23425289 MS.gene88592:CDS
AGGTCACATATGATACAACT+GGG 0.659583 1.4:+23422331 MS.gene88592:intron
TCTGTAATTGCATATACATG+AGG 0.661222 1.4:-23416248 None:intergenic
CTGTGCAAATCAGACAAAAG+CGG 0.662421 1.4:+23416133 MS.gene88592:intron
TGAAATCCATGGAAGACGTG+TGG 0.664043 1.4:+23425125 MS.gene88592:CDS
AGCTTGGAAAAGGGATTACG+GGG 0.665414 1.4:+23425486 MS.gene88592:CDS
TTAATGCAGCGAATAAAATG+TGG 0.676394 1.4:-23423044 None:intergenic
TGTGTGTCATTATGCTGGAG+AGG 0.679978 1.4:+23422121 MS.gene88592:CDS
TCGCCTGAAACATATGAACA+AGG 0.680501 1.4:+23423083 MS.gene88592:CDS
ATATAATTGTTACCATACAG+AGG 0.680675 1.4:-23416194 None:intergenic
CCGTTAACCTTAAAACCAGG+AGG 0.697910 1.4:-23413642 None:intergenic
TCCCTCAAGAAGCTTCAAGG+AGG 0.719990 1.4:+23423653 MS.gene88592:CDS
AGCAGAGATAACAATCCCAG+TGG 0.723947 1.4:-23421987 None:intergenic
TGTCTTCTAGGGAATCTAGG+TGG 0.726506 1.4:+23413907 MS.gene88592:CDS
GTGCAAATCAGACAAAAGCG+GGG 0.734775 1.4:+23416135 MS.gene88592:intron
GCCATCCGAGAAATGATACG+AGG 0.739270 1.4:+23416275 MS.gene88592:CDS
TGGTAGTAAGAAACAGAACA+GGG 0.749156 1.4:+23423874 MS.gene88592:CDS
ACAACAGCTGAGGTGCTGTG+GGG 0.756579 1.4:+23423115 MS.gene88592:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr1.4 gene 23413591 23425621 23413591 ID=MS.gene88592
chr1.4 mRNA 23413591 23425621 23413591 ID=MS.gene88592.t1;Parent=MS.gene88592
chr1.4 exon 23413591 23413959 23413591 ID=MS.gene88592.t1.exon1;Parent=MS.gene88592.t1
chr1.4 CDS 23413591 23413959 23413591 ID=cds.MS.gene88592.t1;Parent=MS.gene88592.t1
chr1.4 exon 23415718 23415819 23415718 ID=MS.gene88592.t1.exon2;Parent=MS.gene88592.t1
chr1.4 CDS 23415718 23415819 23415718 ID=cds.MS.gene88592.t1;Parent=MS.gene88592.t1
chr1.4 exon 23415916 23416059 23415916 ID=MS.gene88592.t1.exon3;Parent=MS.gene88592.t1
chr1.4 CDS 23415916 23416059 23415916 ID=cds.MS.gene88592.t1;Parent=MS.gene88592.t1
chr1.4 exon 23416146 23416296 23416146 ID=MS.gene88592.t1.exon4;Parent=MS.gene88592.t1
chr1.4 CDS 23416146 23416296 23416146 ID=cds.MS.gene88592.t1;Parent=MS.gene88592.t1
chr1.4 exon 23416413 23416440 23416413 ID=MS.gene88592.t1.exon5;Parent=MS.gene88592.t1
chr1.4 CDS 23416413 23416440 23416413 ID=cds.MS.gene88592.t1;Parent=MS.gene88592.t1
chr1.4 exon 23416664 23416829 23416664 ID=MS.gene88592.t1.exon6;Parent=MS.gene88592.t1
chr1.4 CDS 23416664 23416829 23416664 ID=cds.MS.gene88592.t1;Parent=MS.gene88592.t1
chr1.4 exon 23416953 23417016 23416953 ID=MS.gene88592.t1.exon7;Parent=MS.gene88592.t1
chr1.4 CDS 23416953 23417016 23416953 ID=cds.MS.gene88592.t1;Parent=MS.gene88592.t1
chr1.4 exon 23417157 23417170 23417157 ID=MS.gene88592.t1.exon8;Parent=MS.gene88592.t1
chr1.4 CDS 23417157 23417170 23417157 ID=cds.MS.gene88592.t1;Parent=MS.gene88592.t1
chr1.4 exon 23417257 23417341 23417257 ID=MS.gene88592.t1.exon9;Parent=MS.gene88592.t1
chr1.4 CDS 23417257 23417341 23417257 ID=cds.MS.gene88592.t1;Parent=MS.gene88592.t1
chr1.4 exon 23419947 23420050 23419947 ID=MS.gene88592.t1.exon10;Parent=MS.gene88592.t1
chr1.4 CDS 23419947 23420050 23419947 ID=cds.MS.gene88592.t1;Parent=MS.gene88592.t1
chr1.4 exon 23420181 23420319 23420181 ID=MS.gene88592.t1.exon11;Parent=MS.gene88592.t1
chr1.4 CDS 23420181 23420319 23420181 ID=cds.MS.gene88592.t1;Parent=MS.gene88592.t1
chr1.4 exon 23420633 23420751 23420633 ID=MS.gene88592.t1.exon12;Parent=MS.gene88592.t1
chr1.4 CDS 23420633 23420751 23420633 ID=cds.MS.gene88592.t1;Parent=MS.gene88592.t1
chr1.4 exon 23420963 23421115 23420963 ID=MS.gene88592.t1.exon13;Parent=MS.gene88592.t1
chr1.4 CDS 23420963 23421115 23420963 ID=cds.MS.gene88592.t1;Parent=MS.gene88592.t1
chr1.4 exon 23421226 23421315 23421226 ID=MS.gene88592.t1.exon14;Parent=MS.gene88592.t1
chr1.4 CDS 23421226 23421315 23421226 ID=cds.MS.gene88592.t1;Parent=MS.gene88592.t1
chr1.4 exon 23421442 23421519 23421442 ID=MS.gene88592.t1.exon15;Parent=MS.gene88592.t1
chr1.4 CDS 23421442 23421519 23421442 ID=cds.MS.gene88592.t1;Parent=MS.gene88592.t1
chr1.4 exon 23421984 23422142 23421984 ID=MS.gene88592.t1.exon16;Parent=MS.gene88592.t1
chr1.4 CDS 23421984 23422142 23421984 ID=cds.MS.gene88592.t1;Parent=MS.gene88592.t1
chr1.4 exon 23422333 23422539 23422333 ID=MS.gene88592.t1.exon17;Parent=MS.gene88592.t1
chr1.4 CDS 23422333 23422539 23422333 ID=cds.MS.gene88592.t1;Parent=MS.gene88592.t1
chr1.4 exon 23423002 23423207 23423002 ID=MS.gene88592.t1.exon18;Parent=MS.gene88592.t1
chr1.4 CDS 23423002 23423207 23423002 ID=cds.MS.gene88592.t1;Parent=MS.gene88592.t1
chr1.4 exon 23423339 23423471 23423339 ID=MS.gene88592.t1.exon19;Parent=MS.gene88592.t1
chr1.4 CDS 23423339 23423471 23423339 ID=cds.MS.gene88592.t1;Parent=MS.gene88592.t1
chr1.4 exon 23423566 23423695 23423566 ID=MS.gene88592.t1.exon20;Parent=MS.gene88592.t1
chr1.4 CDS 23423566 23423695 23423566 ID=cds.MS.gene88592.t1;Parent=MS.gene88592.t1
chr1.4 exon 23423784 23423930 23423784 ID=MS.gene88592.t1.exon21;Parent=MS.gene88592.t1
chr1.4 CDS 23423784 23423930 23423784 ID=cds.MS.gene88592.t1;Parent=MS.gene88592.t1
chr1.4 exon 23424756 23424823 23424756 ID=MS.gene88592.t1.exon22;Parent=MS.gene88592.t1
chr1.4 CDS 23424756 23424823 23424756 ID=cds.MS.gene88592.t1;Parent=MS.gene88592.t1
chr1.4 exon 23424959 23425621 23424959 ID=MS.gene88592.t1.exon23;Parent=MS.gene88592.t1
chr1.4 CDS 23424959 23425621 23424959 ID=cds.MS.gene88592.t1;Parent=MS.gene88592.t1
Gene Sequence

>MS.gene88592

ATGTCTATGGGATCCAAGATTCTTCCTTCTCTCCAGCCTATCAAATCGTTGCCTCCTGGTTTTAAGGTTAACGGTAATCTGACCCGTGATGTAATGGAAACCCATGGAGACGGTAAATTGAGAAGCAGTGGTTTGGTTGGATCAAGTAGTCCTGAAAATGATGATCATTCTGAAGAAGCTCAAGATCGTGCCGGTGGCATGGGTCTTTTCAATGAGGACATAGCGTATAGTGGAAAATCTGTATTATTAGAAGACAGGGAATCTATTGTTGATGAAGGCTTGGAATCTGTTCCTCTCCCCTTCCAATCAGTTTCAGTGTCTTCTAGGGAATCTAGGTGGAGTGATACAACACCTTATGTTTCAAAGAAGGTACTTTTAGCTTCAGATTATAATTTAATCTTATTCTCGGTTTTGAAATTGTTTAATGCAGTTCGATAAATATGCTGGTTTTCCTTGAAGGATGCTCTAGAATTGGATGCTTTTTTTTCCATTTTTTTTAATTAGAAGTTTAAAGCTCAAATTTTTAATTTTATATGTTTATTGTAGGTTAAGTATATTGTCGTTAATTATTATATGATCTCTTCCAAATAAACCCCAGAGCTTCAAAATACTAGTCACTGATCTGTCCTATAGTATATGTATACCATCACTGATTCCAAAGTAATGAGTGTTATCTAGCAACAGTAGAGAAACTTCGTATCTTATTGAAATTTGATGTTAGTTTGTTTAATAGGAGATTGTTAATACAGAGTATAGACTGAAATACTTCATGTGTACAAGATTAAGAAACAATTTTAGGATTAGAAGAAGGCATCGGAATCATATTGGTTGTAATGTGAAAGTTCATATTCTGTAGTTGTCAATTTTGGTTGAGTGTCAGGTTTGGAACATGTTAGGAGCCAGTTGAAAATTGAAACTACATCTCAGATTAAGGTAGGCCAGAAGAAATGAATGTTGGCGGGAGGTATTGATCTAGACTTCTATCAGACAACTCATAATCCATTGGTAAACACTTCTGGAGTTTAACCAGAAACAAAGAAAATATCAGGGTTTTACTGCAAAAAAATTACACTTTTCTGGAGAAGTAGTCTTGGCAGATTGTTTTTTTCTTCACGGTAACAAATTCATGTCATTTCATTAAAAACAAAGTGTGCAATACAAGATAGCAAAATATCATAGGAATGGTGACTAGATAAAGATGTGACACCCAAAGTCAGAGTGTGAGCAACCGCATAACTTGTCGCTGTGTAAACTTAACCTTGAAGTTTGAACTAACACCAATGAGGGATCTAAAATTGTCAATGGTTACCCAGATCCCGATATGTCTTCCTTGTTGTGATGGATAGCCTAGACTACCATTTGATAGTCAAGCTCAAAAATGACATTTGTGTTTCCTAAGTCACAGTCACACTGGATGGCTAGCCAAAGAACCATGGCCTCGCCTTCTTTAACAGACCTTTGGAACAAACCAAGTGGTATAGGCTTTAATAAAACCCCCCGATGCATCATGAAGACAGAAACCTATGCTTGTGACTCCCAAATTCTGATGGAAACATGTATCCAAGTTATATTTCAACTTCCATGGAGGAGGCTTAGTCCAGGGAAATGAAACATTTATTTCAATTTCTTTGATATACATTAAGTTTGGAAGCGATTAAAATTGGGCCTGGCCATTTTCTTGTTTGTCTTCTGCTATCACTTTGATCCAGTATTGTTTTCAACACATATCCTTATGTCGTGGTTTGAAAATTGAAGTTGATGATTATTCATTTTCTTTGATATTTTTGATTTTTATTGACTCAGTTTTGTATATCCTTTCTACTGACTGCTGAGAATGTCTTGTCTTGATAAAGAGTAATTTATGTCAATTTAGAGATTTGCTACTGTTTGTTGTCTGCCATTATTCTATTGCCAAACAAAAGCTTATTTACCTTTGCTATTTCTATCTTTTTAATTAATGATTTTGTGGTGTGTTTTGTAAATGATTCAAAACAAGGAATACCATGTTAGCAATTCAAGAAAATAGTTTGATGAGCTTGTTTGAGTTATCAATCATTTGTTGATTGCCTTAAATTTGAAAATTGTTACGTTACGACTTTCACTTACTTCTGATGTTAACTATTTCAGAAACTCCAGTCTTGGTTTCAACTTCCAAATGGGAATTGGGAGTTGGCAAATATAATAAAAACTTCTGGAACAGAATCTGTTATTTCATTGCCAGATGGGAAGGTAAGATAAATAAGATATGAATATTTCTCTAGAGCGGTGTTCTTAGTTTTTAGCTTTATTAACTGCACAGTCTCACATTCTCTGGGACTTTTATAGGTTTTAAAAGTGAAACAAGACTGTTTGGTATCGGCAAATCCTGATATTCTTGATGGAGTGGATGACCTCATGCAACTTAGTTATTTAAACGAACCGTCAGTTTTATACGATTTACAGTACAGATACAATCAAAATATGATCTATGTAAGCTTTAATGTCTCTTCAAATTTTTTCACAACATTTTATATGATCATAACTCTTACCGTTATCTGTGTAACTGTGCAAATCAGACAAAAGCGGGGCCTGTTTTGGTTGCTGTAAATCCTTTCAAGAAAGTTCCTCTGTATGGTAACAATTATATTGAAGCCTACAAGCGTAAAGCAACAGAAAGCCCTCATGTATATGCAATTACAGACACAGCCATCCGAGAAATGATACGAGGTAACTTTTTATTTCTTCATATGAACTTATATCGATGGAGTTTTAGAGATAAGAGTTAAGACTTCTTCCATTGGTTTTAAGAAAGAACTTACACCAACTCTTGTTTTGTTTTTCAGATGAAGTTAATCAGTCTATAATTATAAGGTCAGTTATTTTTGTTGAATTCTCCTTTAATGAGTAGCTAGTCATGAGAGATTGTACTAAATTTAATGTCTATAAGCTGCTCTCAAATTATTTGTTGTACTGTATGCAGATTTTGTCATTATTGTGAAACTTGTTCTTGGTTGTTCTTATCCTTATTTTCCCCTTAGATGTGTATTGTGTTTGAATTGAGGCATATAATAATAGTTATGATCTACATATTCAGTGGTGAGAGTGGAGCTGGAAAGACAGAGACAGCAAAGATAGCAATGCAGTACTTGGCTGCTCTTGGAGGTGGAAGTGGAATAGAGTATGAGATATTAAAGACTAATCCAATACTCGAAGCCTTTGGTAATGCAAAAACTTTGAGAAATGACAACTCAAGTCGTTTTGTAAGATTCCTGACTGATCATATTAATTCTTGAAATGGCTATTATTATGCGTTTCATGCAAAACCTGTTATTATATATACTTCAATTCTGGAAGTTCTCATAATTTGGTTGAATGCGTGACAGGGAAAGCTCATTGAGATACACTTCAGTGAAACTGGAAAAATTTCTGGTGCTAATATTCAAACATGTAGGTTTTCTGCTGTTTAATGCTTGAAACTTGAAACCAATGTGCCTTTGCTCTTTCTGAAAGTTTCTAACTAATTATAATGTTAAATGTTTGTATCTATGTGTTGAATTCATGTGGTGCTCCTGGCCTGCCATCAACAGTTTTGCTTGAAAAGGTAATTATACATTCTTCTGAGCTAAATTTTCTAAGTTTTGTCCACATTACATCAGTAGACACTAATGTTGTTTGGTATCTGGACAGTCTAGAGTAGTTCAATGCAATGAAGGGGAAAGGTCATATCATATATTTTATCAGTTATGCGCCGGTGCACCACCAGCTCTTCGAGGTAATTACTGGCTTGTACCTGACTATCATTTCTGCAATACTTTGTTGCATATTGTGAATATTTCTTAAGTCTTTATCTTGTCAATGGTTGTTTGAAACTATTTCCTACTCAAAAAAAAATAATAATCAATTTAGTGTTATATAAATTATTTTTTATTTTTTTTGTTTAGCTGTCATATAATTAGTTTCCTTCGTTTCGATAGTCTCCGATAATACAAATTGTAAATCTTGTATATATGATGGATTGTGCTCAGGCATTCCGGAAGAAACTTTTTAAATTATTGCCCATCTCGAGATGGTACGGTAATTTTCTAGAAAAGGTTCGCTCTAAGGAAATTACTGAGTTTATCAACTCTAGTGACCAACTTGTAGATCTTCCAATGAAGTCTCTTCGAAGTTCTCAAGCTCAATTCATTTATAACAAGTTTGGTGCATATGATTTGTATGCTCTAGCTAGAGGGGGAGTGTTGAAAAGTATCTCCATGCTCTAGCTAGAGGGGGAGTGTTGAAAAGTATCTCCTCCAATTTAGGGAGAATGTAATGAATCTATTTAGTGTTGCTGTGTTGCTGTTTTTTATTTGTATTGCTGAAGTTATGAGTTTTAGGTAAAAGAAGGAGAAGGATAAGAAGAAATATAATTATAGGGATATACAAGACTCCTAAACTTAAACAAATAAATAAATCTGGAAACAGATCATGATAATAATTAGGTAATATAGAAACTAATCCTACGCGATGATCTTAGATACGTAAGATTAGAAACTGATTCTAGGAGATAATCTAACATAATATTAACATTATATCAAAGATATTACGAGACATTTCACACATTCTAGTATAACAGCTTACTGGTTTATTGTAAAACAGAAATCCGTTCATATATTGTGCACAAAGTGCAATAGTTGAAATGATTATAATGCTGAAAAATTTATGAATAATATAAATAAAAATGCTTTCTACTGATAATAGAACTTGGTAACATACATGTAACTAAAGGATATACTCATATACACTGTCAATGTAAAGATTTTTTACACTGTCAATCAATCATCATCGTCAGATCATTATAAACGTTTGACTTTAATCATAACTACTTTTAAAGTCATTCATATGATTGGTTGTAATTCGCTGATGGTGTAAAACTTTTCAGACTAACAATGTATAAAAATCAAACTCTTAACTAGATAGAAAATCTAATAAGGCCTTATTTCCACTTGTGGCAGTGTGAGGATGATCTTATCTGGGTGGTGATTCTGACTAACAGGATACAATGATTCCCATAGAAGCTGTATTTGATAGGTGTAGTAGGCCTCTATCCTGTTATTTTCTTCGAGTATGGGATACCAAACTGTTCTAAGTAGGCTATTGCTTGGCAGTTTAGCATGATAACTGTGGCATAAATGACCCAAAAACGAGCTCTCCAAGTGGACATCAATGACCCAAAAACAATCTCTCCGAAGTAAATTACCATGCTCAGGTGAACAGTTATGATCTGGAGCTTTAAATAACCAACATATAGTGATGCCGGCTCTACAAGTCTGCAACAAGTCACGAGTTTAATTCTAAGTTCTACTGTGATGCTGTCCAGAGAAAGGATTTGACCTTTGAGGAGTCCTTGGATTTACAATTGGGTTGTCAAGAAGAAATGGTGGTTAGATGAGTAAGCCTTAAGCGAAGAAGGGTTTCGAAGAAAATTGTCTCATGGATTTAGCATTTACACTCTTCTATCTGGGTTAGTTGATAACGTTGTGGAATCAAATAGATGCAAGACATAGTAGGACTATACTTCGCTAGTCATGCTTTACTCAAGCTTCTAAGGACTTGATATGAGAACCATCACCTTGATTGAGAAATGGTATTACTGAAAGACATATAATTGAGTTGTTAACTTAAATGGAATGGTATGAGTGGCAGTGATTGCTAGTTTAGGATCCCACTAATTCTGATTCTAACAATACAATCTCTGTTTGTTGGGGAATACGGTTGATTCTTGGTGAGATGCCGTGTGCTACAATTAGTAACCAAAAGGAATCAATTTCAACAAGAAGCCAGTATTTATTTTTTAAAAAATATCCATGCAGTTACACTTCAATAGTAATTTTATTTTTTCTGGTGAACACACTTCAATAGTAATTTGCTTGCAATGCAGCTAGTCTATGACATGCTATAATAAGATTGATAATCTAATACATGCTATAATATCTTGGTTTAGCTCCTGGGATCAGTTCTCAATTTTAGCACGTCTAGATTATCTGTTAGGATTAGTTTTCCTATCCCTTATATTATTTTTTTGAAGGAATATCCCTTATATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTAATTGTTTCTTAGTAATCAGTCTTTTGTATGAAAACCACTATCAAGTCAATATCAATAATATCCAAAGCTCTTATTATTTTCTCTCCTTTTATTTAAAATCCCACAACTTCAATAGGAATATAACCTCAGATAAGCATTGTATATTTGTATTTGTCTTGTCTGTAACATTTAATGTTCTTTGTTCATGTTTTTTTGATTTACTGTTTCATTGAATGTTTGATTTCTTGTTTCAGAGAAGCTCAGCCTACAAAATGCAGAAGATTATAAATATTTGAAGCAGAGCAATTGTTATTCAATTACTGGTGTTAATGATGCAGAAGAATTTCGCATAGTCATGGTACATTTTTTTATCTTTTAAAGATGATTTGCCTCCATAGAGGCTTTAATCACCGTTCTTATCAAATGTTTGATTGATTGACTGTATTTGAAATGATAGTTTGACATAGATATGAACCTTATATTTCCAGGAAGCTCTTGATGTTGTCCACATCAGTAAAGAAGATCAAGAGACTGTATTTGCTATGCTTGCTGCAGTATTATGGTTCGGGAACATATCATTTACTGTCATTGATAATGAAAACCATGTTCAAGCTGTTGAAAATGAGGGTAAGAAATTTACAGAACCACTACTGAATGAATGCATGCTTCTTTTAAGTTTTCTTGAGCTTTCACCTAAGCCTTCAAAAAATTTGCTGTAACTGTGACTTGTTTTCACTTTCATGTGATAACCGTAATTTATATATTGCATTGGTACTTGGTAGTGGGAAAAAGGCTTTCTGCTGGTGTTGTAACTTTAAATTAGATATGGTTTATTAGATACCTAATACTTACTATAAATGCTTTGAACATATAGTTGCTTTCAAACGTTTCAAGTTATTCAATACCTCCCTTACATTGAATCTTTTTGTTACTTCTAAAGGGTTGTTCCACGTCGCCGAATTGATTGGCTGTGACGTTGAAGATCTCAAGTTGACTCTATCAACTCGCAAAATGAAAGTTGGGAATGATAATATTGTCCAAAAGTTGACACAATCACAGGTAAAATGGCTATTGTGTTGAATACTGAATACTGGACTGCTTAGCATATTTTTATGGATTGGGGTTGTGGTGGTTTGTATATTCCATATTCCCAGTCAAAATATCATACAGGTCATTAGACCGGTCAATTTGTAAAATGCCAAATGTAATGAACGGATAATGATGGATATAATCTTTCTCAATATCTTACATATTATACTTTGTCTTGTAGGCAATTGATGCAAGAGATGCTTTGGCCAAGTCTATATATTCATGCCTGTTTGATTGGTTGGTTGAACAAATAAATAAATCACTTGCTGTTGGCAAAAGGCGTACCGGCAGATCAATCAGTATTCTAGATATATATGGCTTTGAATCATTCAATGTAAGTATATATTAAACTTTATCTCATTCTTTCTTTACATTTATCCGACTATCCTTTTCCTCTTTAAATTTTAAATTATTTTGGCTCTTTAATGCTACATATATTTGCAGAGGAACAGTTTTGAGCAGTTCTGCATAAATTATGCAAATGAAAGATTGCAGCAACACTTCAATCGTCATTTATTCAAGTTAGAGCAGGAGGTATGCACCCCACTGAAACTGAAGGCTCTAAACAAATATTTGATGCCTTCATATCTTGAAGGAATATAATAGATACCGACCTAGGAATAGCCAAACATTTACCTTATATCTGTTGATTGTTTTTAGGAATATATTCAAGATGGCATTGACTGGGCTAAGGTTGAATTTGAAGACAATCAAGACTGCCTTAATCTTTTTGAGAAGGTACAGAACTTTTGTTCCCTGACCCCTTTTCAGAACAATATCTAGGGGGCTTGTAATTGAATAGTTGCAATGGGAAAGTGGTAATATATTCATTTTGATTTTCATCACATTATATCTTGTATCTGCATGTGCATTTGAAAAAAAACACCTTTGAATTTTCGAAGGGTAAGCTTTGTTAATGCAATTTTTCTTGATTAAAATTCTTTAAGCATTTCCCATGTTTATTTGATTATGAATGTAAACTGTATTGGCGCTGGTTTAATTCGGGATGCATAAACAACAATGGTTTCTCTTGTTTCCCCGACATGAAGTACTGTGGTTGATTGGTGAACTATAAATGGAGGAGTTTGTTGTGGCAACCATACTTCCTTGATGTGAAAATTTTGATATAATGATTAGAAATTAGAAATCCTTGTGTGTTGACATTGACATCTGAATTATGATATATATATATATATTTGCAGAGACCACTGGGATTGTTATCTCTGCTAGATGAAGAGTCCACTTTCCCAAATGGCACAGATTTGACATTTGCCAACAAGCTTAAACAGCATTTAAATTCCAAATCATGTTTCAAAGGAGAAAGAGACCAAGCCTTTACTGTGTGTCATTATGCTGGAGAGGTAATAATTTGATCATTTTAATTTTGATAAAAACGTAATGAACCACAGTTTTAATTGGAATATCGTGTTGAATATTTTTTTTAACTCCCAAACTCTATCATTATCCTTAAAGAAGAGGGTGACTAGTTGATTCAAATTTGCTCATCCTACCTAACTGTTGTTTGATAGTTCTTTTTGATCCTTTCCTTAGGTCACATATGATACAACTGGGTTTCTGGAGAAGAATAGGGACCTATTGCACTTGGATTCCATCCAACTTCTATCGTCATGCACATGTCATCTTCCTCAAATATTTGCATCTCATATGCTTACACAGTCTGAAAAGCCAGTAGTTGGTCCTTTACACAAGTCAGGTGGGGCAGATTCCCAAAAGCTAAGTGTTGCAACAAAATTCAAGGTATATCAGCTTTCATTATGAGGTGATCCAAAACATCAAGTATCATGAAATAGTCTAAAACTTTGGCAAACTAAAATTATGAGTCTTGCAACTTATTATTCAGTATATATCCTAAATTGTGTTATGCTACTGATCCTATTGATCTTGACCAAGCTATGCAAAAATTTTGCACTTATCGCTGGAAAATAGGCTGTCTCATCAAAATATTAATTGGAATACTGGTAATATAGCCTAAACATATAATGTTTCAAATTAGTTAGTAATAAAAAGTCGCAGTTTAAACCAAATAAATATTGTGCGTAACTTGGTTTAAGTTATAGAAGTAGGAAAGGATACAAATGCAAAAAATTTAATTTGAGAGTATTGCAAGATAGAGTATAGAGTAAAAAATTCCAATGTATCAAACCATGCATTACATGAAAGCTAGATATATTATCAACTTTCTCCTCCATTGGCATGCAGGGTCAGCTGTTCCAACTGATGCAACGCTTAGAGAGCACAACTCCACATTTTATTCGCTGCATTAAGCCCAATAATCTCCAATCGCCTGAAACATATGAACAAGGACTTGTACTACAACAGCTGAGGTGCTGTGGGGTGCTGGAAGTGGTTCGAATATCAAGATCCGGCTTTCCAACAAGAATGTCTCACCAAAAGTTCGCCAGAAGGTATATAACAGAAAGTAACTAATGATTCATATCCTTTCGATTACGTCCACCACCTACACCACATCCCCCTCTTCCACGGTGGTTTTCTTTTGTCTAACCTTTTTTTTATTGGCTTCGGTGTGCCAAATCAGATACGGCTTTCTCCTTGATAATGCTGCATCACAGGATCCACTTAGTGTTTCAGTTTCAATTCTTCATCAATTTAATATTTTGCCTGAGATGTTTCAAGTTGGCTACACAAAGTTATTTTTCAGAACAGGGCAGGTAATTTTTTATATTATGAAAATGATGATATGAATTTTTTGTTAGACGGACGTTCATTTCAAATCATCTTACGTGTGCTTTGACTACATTTCAGATTGGTGTGCTTGAAGATACAAGAAATCGTACCCTTCATGGCATCTTACGTGTCCAAAGTTGCTTTAGGGGTTACCAAGCTCGTCGTTCCCTCAAGAAGCTTCAAGGAGGAATCTCTACTTTGCAGTCATGTATTTCGTTTTTCACTGCCTATTTCTTACTTAAATATCGTCTAAAATTGAGTATTATGTAATGGAAAGATATTATCTATTCATGCAGTTATTCGGGGACAGAAAACGAGAAAGGCATATGCTGCTTTACTTCAGAGACATAGAGCTGCTATTATTATACAGAAGCGGACAAAAGCAATGGTAGTAAGAAACAGAACAGGGACTATCAGAGATGCTACAGTTGTCATACAATCAGGTTAGAGTTTATATTTTTGTAGATGCCAAGATACATGCTACCATTTTGGCATTTTGAATGTTTTCATCTTTGATGCATAGACACAATATATCAATACGAATGTCGGATACGATGTGTATCTGATACCACAATACCCCATTCCTTAAAAAATACAGGATGCAATACACATACATATACAAGCAAATCCAATAATTTACAAAACATAATGAATATTATTGCAGTTTAGTGATGATGACCAAAAATAGTGATGGAAATTGGAATATGGGTGAAGAAATCTGATATAAGTTGCATCCGTTGTAATAAACATATTACATATATAAATGGGAATATTGGGATTAATAGTTGAATGAGTGAAGGGGTGATATAGTTGCATTCGTTACGATTCACTGAAGAGTATTAAGAATGAGTCAGAAATGTCGATGGTGTGTCGAGAGTGTGCCAACAGCATATCGAGAGTGTATCCAAACTTTTTTTACTAAAAAATTGGTCCCTGATATGACACATTTGGCAGTGTATCAAGAGTATTGATTACGATATGGGCGGAAAAATTAAGTATCAATGCATGACAGGCTTATTTGTGACTTCTTTAACTGAGAAAATTGAATTCCTACCTAAATGTGCAAATGATAGATGAATACAAGTTAACATAGGTGTTTCACCAAGTGTTTTACTTCCCATATTCAAATTTGTCTTCTTCGAATGAATTATGCAGTAAAAGAGAATGATACATAAAATTTATATATTTTGTTGTAATTTTGTGGATGCCTGTCTTTCCACGATACTGTTGGTAAATTTCCATAACTTTATTTGAGCTACTCTTTGCAGTCATTCGGGGATGGTTGGTCAGAAGATGCTCAGGAGATATTGGATTTTCGAAACACGGGGACATGAAGGTATTCCTTTTCCTCAAGTTCAGAAACTATATAATATTAATATCCCATCCTTCTTTTGTACAATATGAAATTTTTTATATTCTGCTTTTAGAAGCTTCATCTTTGTGATGCTAACAATCATGAACTCCGAAACAGACAACAGAGTCGGATGAGATTCTGGTCAAGTCATCTTTCCTGGCTGAATTGCAGCGCCGGGTACTTAAGGCCGAAGCTGCTCTGAGAGAGAAAGATGAGGAAAATGACATCCTTAACCAACGTATCCAACAATACGAGAACAGATGGTCTGAATACGAGTTGAAGATGAAATCCATGGAAGACGTGTGGCAGAAACAAATGAGATCACTTCAATCTAGCCTCTCCATTGCTAAGAAGAGCCTTGCTATTGATGACTCTGACAGAAATTCAGATGCATCTGTTAATAATACAAGCGATGAGCGTGATTACAGCTGGGATGTGGGAAGTAATCACAGGCGCCAAGAAAGCAACGGAACAAGATCAACAAGTGCTAGTTTGAGCGTTATAAGTCGGCTTGCTGAAGAATTTGAGCAAAGGAGTCAAGTATTTGGTGATGATGCCAAGTTCTTAGTTGAGGTGAAATCTGGTCAAGCAGAAGCAAGTTTGAATCCAGATCAAGAACTTAGAAGGCTAAAACAGATGTTTGAAGCTTGGAAAAGGGATTACGGGGCAAGATTGCGTGAAACGAAGTTGATTATAAATAAACTTGGAACTGAAGACAGTGCACTTGAAAAAATGAAGAAAAAGTGGTGGGGAAGAAGGAATAGTACAAGGATAAATTGA

Protein sequence

>MS.gene88592.t1

MSMGSKILPSLQPIKSLPPGFKVNGNLTRDVMETHGDGKLRSSGLVGSSSPENDDHSEEAQDRAGGMGLFNEDIAYSGKSVLLEDRESIVDEGLESVPLPFQSVSVSSRESRWSDTTPYVSKKKLQSWFQLPNGNWELANIIKTSGTESVISLPDGKVLKVKQDCLVSANPDILDGVDDLMQLSYLNEPSVLYDLQYRYNQNMIYTKAGPVLVAVNPFKKVPLYGNNYIEAYKRKATESPHVYAITDTAIREMIRDEVNQSIIISGESGAGKTETAKIAMQYLAALGGGSGIEYEILKTNPILEAFGNAKTLRNDNSSRFGKLIEIHFSETGKISGANIQTFLLEKSRVVQCNEGERSYHIFYQLCAGAPPALREKLSLQNAEDYKYLKQSNCYSITGVNDAEEFRIVMEALDVVHISKEDQETVFAMLAAVLWFGNISFTVIDNENHVQAVENEGLFHVAELIGCDVEDLKLTLSTRKMKVGNDNIVQKLTQSQAIDARDALAKSIYSCLFDWLVEQINKSLAVGKRRTGRSISILDIYGFESFNRNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVEFEDNQDCLNLFEKRPLGLLSLLDEESTFPNGTDLTFANKLKQHLNSKSCFKGERDQAFTVCHYAGEVTYDTTGFLEKNRDLLHLDSIQLLSSCTCHLPQIFASHMLTQSEKPVVGPLHKSGGADSQKLSVATKFKGQLFQLMQRLESTTPHFIRCIKPNNLQSPETYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRYGFLLDNAASQDPLSVSVSILHQFNILPEMFQVGYTKLFFRTGQIGVLEDTRNRTLHGILRVQSCFRGYQARRSLKKLQGGISTLQSFIRGQKTRKAYAALLQRHRAAIIIQKRTKAMVVRNRTGTIRDATVVIQSVIRGWLVRRCSGDIGFSKHGDMKTTESDEILVKSSFLAELQRRVLKAEAALREKDEENDILNQRIQQYENRWSEYELKMKSMEDVWQKQMRSLQSSLSIAKKSLAIDDSDRNSDASVNNTSDERDYSWDVGSNHRRQESNGTRSTSASLSVISRLAEEFEQRSQVFGDDAKFLVEVKSGQAEASLNPDQELRRLKQMFEAWKRDYGARLRETKLIINKLGTEDSALEKMKKKWWGRRNSTRIN