Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050792.t1 | XP_003626148.1 | 98.1 | 638 | 5 | 1 | 1 | 631 | 1 | 638 | 0.00E+00 | 1186 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050792.t1 | Q8BJ34 | 28.4 | 155 | 108 | 2 | 15 | 168 | 348 | 500 | 4.2e-09 | 64.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050792.t1 | G7KWF4 | 98.1 | 638 | 5 | 1 | 1 | 631 | 1 | 638 | 0.0e+00 | 1186.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050792 | MS.gene22783 | 0.816768 | 4.66E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050792.t1 | MTR_7g111570 | 98.119 | 638 | 5 | 1 | 1 | 631 | 1 | 638 | 0.0 | 1279 |
| MS.gene050792.t1 | MTR_7g110390 | 75.776 | 161 | 38 | 1 | 12 | 171 | 6 | 166 | 5.50e-78 | 255 |
| MS.gene050792.t1 | MTR_7g110390 | 49.419 | 172 | 87 | 0 | 454 | 625 | 292 | 463 | 3.63e-45 | 167 |
| MS.gene050792.t1 | MTR_3g050240 | 47.468 | 158 | 79 | 2 | 19 | 175 | 174 | 328 | 1.49e-38 | 149 |
| MS.gene050792.t1 | MTR_3g050240 | 44.667 | 150 | 79 | 2 | 17 | 164 | 8 | 155 | 1.96e-25 | 110 |
| MS.gene050792.t1 | MTR_3g095410 | 46.980 | 149 | 79 | 0 | 17 | 165 | 55 | 203 | 3.81e-38 | 152 |
| MS.gene050792.t1 | MTR_1g023460 | 43.195 | 169 | 86 | 4 | 11 | 170 | 2 | 169 | 3.41e-31 | 120 |
| MS.gene050792.t1 | MTR_7g108660 | 41.279 | 172 | 79 | 2 | 454 | 624 | 100 | 250 | 8.62e-30 | 118 |
| MS.gene050792.t1 | MTR_4g085820 | 48.246 | 114 | 57 | 2 | 19 | 130 | 48 | 161 | 9.69e-23 | 102 |
| MS.gene050792.t1 | MTR_8g011120 | 37.037 | 162 | 82 | 5 | 18 | 165 | 33 | 188 | 1.15e-20 | 96.7 |
| MS.gene050792.t1 | MTR_8g011570 | 35.443 | 158 | 82 | 4 | 22 | 165 | 35 | 186 | 1.46e-18 | 90.1 |
| MS.gene050792.t1 | MTR_7g077430 | 35.570 | 149 | 88 | 4 | 17 | 165 | 470 | 610 | 3.25e-18 | 89.4 |
| MS.gene050792.t1 | MTR_7g077430 | 38.136 | 118 | 66 | 3 | 54 | 165 | 2 | 118 | 9.85e-12 | 68.6 |
| MS.gene050792.t1 | MTR_4g098990 | 35.404 | 161 | 85 | 4 | 19 | 165 | 40 | 195 | 5.70e-18 | 87.8 |
| MS.gene050792.t1 | MTR_3g095410 | 54.688 | 64 | 29 | 0 | 102 | 165 | 1 | 64 | 4.81e-14 | 76.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050792.t1 | AT3G62200 | 79.762 | 168 | 34 | 0 | 10 | 177 | 21 | 188 | 3.06e-87 | 286 |
| MS.gene050792.t1 | AT5G61190 | 58.462 | 260 | 81 | 5 | 8 | 265 | 2 | 236 | 3.18e-87 | 288 |
| MS.gene050792.t1 | AT5G61190 | 58.462 | 260 | 81 | 5 | 8 | 265 | 2 | 236 | 3.18e-87 | 288 |
| MS.gene050792.t1 | AT5G61190 | 58.462 | 260 | 81 | 5 | 8 | 265 | 2 | 236 | 1.27e-86 | 288 |
| MS.gene050792.t1 | AT5G61190 | 58.462 | 260 | 81 | 5 | 8 | 265 | 2 | 236 | 5.39e-86 | 289 |
| MS.gene050792.t1 | AT5G61190 | 69.307 | 202 | 60 | 2 | 8 | 207 | 2 | 203 | 6.16e-86 | 289 |
| MS.gene050792.t1 | AT5G61190 | 69.307 | 202 | 60 | 2 | 8 | 207 | 2 | 203 | 8.26e-86 | 289 |
| MS.gene050792.t1 | AT5G61190 | 58.462 | 260 | 81 | 5 | 8 | 265 | 2 | 236 | 1.38e-85 | 289 |
| MS.gene050792.t1 | AT5G61190 | 58.462 | 260 | 81 | 5 | 8 | 265 | 2 | 236 | 1.49e-85 | 289 |
| MS.gene050792.t1 | AT5G61190 | 69.307 | 202 | 60 | 2 | 8 | 207 | 2 | 203 | 1.53e-85 | 289 |
| MS.gene050792.t1 | AT3G62210 | 67.647 | 204 | 61 | 2 | 5 | 205 | 10 | 211 | 1.88e-85 | 269 |
| MS.gene050792.t1 | AT5G61180 | 60.674 | 178 | 52 | 1 | 9 | 168 | 72 | 249 | 1.40e-69 | 231 |
| MS.gene050792.t1 | AT3G61028 | 45.181 | 166 | 88 | 3 | 15 | 177 | 78 | 243 | 1.57e-43 | 157 |
| MS.gene050792.t1 | AT3G61028 | 45.181 | 166 | 88 | 3 | 15 | 177 | 78 | 243 | 1.57e-43 | 157 |
| MS.gene050792.t1 | AT3G60940 | 47.429 | 175 | 83 | 3 | 12 | 177 | 76 | 250 | 3.54e-43 | 156 |
| MS.gene050792.t1 | AT3G60940 | 47.429 | 175 | 83 | 3 | 12 | 177 | 76 | 250 | 3.54e-43 | 156 |
| MS.gene050792.t1 | AT5G64710 | 42.138 | 159 | 91 | 1 | 11 | 168 | 54 | 212 | 9.99e-38 | 150 |
| MS.gene050792.t1 | AT5G09840 | 41.935 | 155 | 90 | 0 | 11 | 165 | 65 | 219 | 2.92e-37 | 149 |
| MS.gene050792.t1 | AT5G61190 | 66.055 | 109 | 35 | 2 | 101 | 207 | 1 | 109 | 2.13e-35 | 143 |
| MS.gene050792.t1 | AT5G61190 | 66.055 | 109 | 35 | 2 | 101 | 207 | 1 | 109 | 2.13e-35 | 143 |
| MS.gene050792.t1 | AT2G15560 | 41.290 | 155 | 87 | 3 | 15 | 165 | 46 | 200 | 3.82e-27 | 115 |
| MS.gene050792.t1 | AT2G15560 | 41.290 | 155 | 87 | 3 | 15 | 165 | 46 | 200 | 4.73e-27 | 115 |
| MS.gene050792.t1 | AT3G62850 | 30.841 | 214 | 131 | 6 | 9 | 211 | 230 | 437 | 6.91e-22 | 99.8 |
| MS.gene050792.t1 | AT3G62850 | 31.210 | 157 | 102 | 2 | 10 | 163 | 7 | 160 | 3.12e-18 | 88.6 |
| MS.gene050792.t1 | AT3G61028 | 40.517 | 116 | 67 | 2 | 15 | 128 | 78 | 193 | 1.04e-21 | 95.5 |
| MS.gene050792.t1 | AT3G62050 | 36.434 | 129 | 73 | 3 | 14 | 139 | 9 | 131 | 4.42e-20 | 87.8 |
| MS.gene050792.t1 | AT5G35640 | 31.111 | 135 | 88 | 2 | 17 | 147 | 32 | 165 | 6.95e-15 | 73.9 |
| MS.gene050792.t1 | AT3G61090 | 29.480 | 173 | 106 | 5 | 18 | 180 | 12 | 178 | 2.10e-14 | 72.4 |
| MS.gene050792.t1 | AT5G64710 | 41.463 | 82 | 47 | 1 | 88 | 168 | 6 | 87 | 3.78e-14 | 76.3 |
| MS.gene050792.t1 | AT3G62460 | 29.927 | 137 | 88 | 3 | 18 | 149 | 58 | 191 | 6.36e-12 | 65.5 |
| MS.gene050792.t1 | AT1G01355 | 32.450 | 151 | 96 | 3 | 28 | 174 | 11 | 159 | 1.25e-11 | 65.5 |
| MS.gene050792.t1 | AT3G56730 | 33.019 | 106 | 65 | 1 | 15 | 120 | 7 | 106 | 2.49e-11 | 63.2 |
| MS.gene050792.t1 | AT3G61100 | 28.485 | 165 | 98 | 5 | 18 | 170 | 8 | 164 | 3.27e-11 | 62.8 |
| MS.gene050792.t1 | AT3G56730 | 30.357 | 112 | 72 | 1 | 9 | 120 | 9 | 114 | 3.77e-11 | 62.8 |
| MS.gene050792.t1 | AT3G56730 | 30.357 | 112 | 72 | 1 | 9 | 120 | 9 | 114 | 3.77e-11 | 62.8 |
| MS.gene050792.t1 | AT1G01355 | 31.788 | 151 | 93 | 3 | 28 | 174 | 11 | 155 | 4.47e-11 | 63.5 |
| MS.gene050792.t1 | AT3G56730 | 32.692 | 104 | 64 | 1 | 17 | 120 | 11 | 108 | 8.29e-11 | 61.6 |
Find 187 sgRNAs with CRISPR-Local
Find 245 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCGAATTATTTATTGATTT+CGG | 0.150955 | 7.4:+4751143 | MS.gene050792:CDS |
| GCGAATTATTTATTGATTTC+GGG | 0.173410 | 7.4:+4751144 | MS.gene050792:CDS |
| GGAAAACCGTTTGGTCTTAA+TGG | 0.186135 | 7.4:-4751747 | None:intergenic |
| AACAGCACTCCAAAGAAATT+TGG | 0.210078 | 7.4:+4752432 | MS.gene050792:CDS |
| CCAATATCTGGCACAGTTCT+AGG | 0.226868 | 7.4:-4751879 | None:intergenic |
| GTTGCAAAAGTATGGGAATT+TGG | 0.231833 | 7.4:-4751807 | None:intergenic |
| GGGATTTGATTCTAGATATC+AGG | 0.233096 | 7.4:+4751473 | MS.gene050792:CDS |
| TCCTTGTCGACATGCTGTTC+TGG | 0.237109 | 7.4:+4751100 | MS.gene050792:CDS |
| AATTTCGTCCCAAATTTCTT+TGG | 0.251306 | 7.4:-4752441 | None:intergenic |
| GGTCTTAATGGCTGGGAATA+TGG | 0.268984 | 7.4:-4751735 | None:intergenic |
| ATTTCTTTGGAGTGCTGTTT+AGG | 0.279080 | 7.4:-4752428 | None:intergenic |
| GAATATGTACAAGGCCTTAT+AGG | 0.288105 | 7.4:+4752170 | MS.gene050792:CDS |
| TGTACATATTCAGAAGGTTT+AGG | 0.309220 | 7.4:-4752158 | None:intergenic |
| CCTAGAACTGTGCCAGATAT+TGG | 0.310900 | 7.4:+4751879 | MS.gene050792:CDS |
| TGCTGGTAGATCGGCAATAA+TGG | 0.316014 | 7.4:+4752484 | MS.gene050792:CDS |
| ACCTCCTCATTCGCAGTTGA+TGG | 0.324550 | 7.4:-4751191 | None:intergenic |
| CCGGTGTAGTTGCAAAAGTA+TGG | 0.328541 | 7.4:-4751815 | None:intergenic |
| AATGGTAAGTGGGGATCTTC+AGG | 0.332723 | 7.4:+4752131 | MS.gene050792:CDS |
| CCCGAGTCAAACCCCGATTC+AGG | 0.333358 | 7.4:+4752771 | MS.gene050792:CDS |
| CCAGCATGAATTTCAGAATA+GGG | 0.333740 | 7.4:-4751423 | None:intergenic |
| GCATGTGGATCGGAGCCTTT+AGG | 0.345450 | 7.4:-4749968 | None:intergenic |
| AATAATAAACTTCCCTCTAA+TGG | 0.351040 | 7.4:+4752113 | MS.gene050792:CDS |
| AGATCAACGAATGAACAAAA+TGG | 0.352005 | 7.4:+4752011 | MS.gene050792:CDS |
| ATGTTCAGATTGCCAATATC+TGG | 0.357086 | 7.4:-4751891 | None:intergenic |
| CGGTTATCTTGAAGTCCAAC+TGG | 0.361639 | 7.4:-4751555 | None:intergenic |
| GATAATTGTTTACATTATTA+CGG | 0.362001 | 7.4:-4751575 | None:intergenic |
| GATCCATTATGGAGCAATAA+TGG | 0.362238 | 7.4:+4751666 | MS.gene050792:CDS |
| GATCCACTTTGAGGAACATT+TGG | 0.363780 | 7.4:-4751615 | None:intergenic |
| TTACCATTATTGCTCCATAA+TGG | 0.363932 | 7.4:-4751669 | None:intergenic |
| TGTTCATTCGTTGATCTTAC+CGG | 0.368690 | 7.4:-4752005 | None:intergenic |
| AACCGTTTGGTCTTAATGGC+TGG | 0.379988 | 7.4:-4751743 | None:intergenic |
| AGGAAATCATCAAAATCAAC+AGG | 0.380452 | 7.4:+4751698 | MS.gene050792:CDS |
| ATTGGCAATCTGAACATATC+TGG | 0.381321 | 7.4:+4751897 | MS.gene050792:CDS |
| TGCTGCTCAGACACAGCAAC+AGG | 0.385298 | 7.4:+4751395 | MS.gene050792:CDS |
| AGATCCCCACTTACCATTAG+AGG | 0.389364 | 7.4:-4752126 | None:intergenic |
| AACATGATTAAGTGAAATTC+CGG | 0.391711 | 7.4:-4750110 | None:intergenic |
| TTCATGGCTTTCGGTCCATT+TGG | 0.392243 | 7.4:-4751525 | None:intergenic |
| GGAAGTGGAGCACTACTCTT+AGG | 0.394120 | 7.4:-4751984 | None:intergenic |
| AATAAATAATTCGCAGGTGC+AGG | 0.398280 | 7.4:-4751135 | None:intergenic |
| TTCGTTGATCTTACCGGAAG+TGG | 0.402973 | 7.4:-4751999 | None:intergenic |
| TTCGGTCCATTTGGTTGACT+CGG | 0.404852 | 7.4:-4751516 | None:intergenic |
| CAGCTAAGAGTGTATGGCTT+TGG | 0.407793 | 7.4:+4751265 | MS.gene050792:CDS |
| TAAGAGTAGTGCTCCACTTC+CGG | 0.410866 | 7.4:+4751986 | MS.gene050792:CDS |
| CAAGTAAAACAACACCTATA+AGG | 0.412949 | 7.4:-4752184 | None:intergenic |
| TCAGAAGTCACCCCTGAATC+GGG | 0.413185 | 7.4:-4752783 | None:intergenic |
| ACTCCGTTGCGGAACAGTGC+GGG | 0.413493 | 7.4:-4751943 | None:intergenic |
| GAGTGTGTAGGTTGATATTC+TGG | 0.418613 | 7.4:-4752077 | None:intergenic |
| ACAGCACTCCAAAGAAATTT+GGG | 0.420086 | 7.4:+4752433 | MS.gene050792:CDS |
| CCTTGTCGACATGCTGTTCT+GGG | 0.422266 | 7.4:+4751101 | MS.gene050792:CDS |
| CTTCTCAGTTGGCATCATCT+TGG | 0.424167 | 7.4:-4752228 | None:intergenic |
| GCGCCAATTCTGATCCATTA+TGG | 0.426102 | 7.4:+4751655 | MS.gene050792:CDS |
| GCTCCATAATGGATCAGAAT+TGG | 0.428216 | 7.4:-4751658 | None:intergenic |
| ATATCTGGTTATCCCAATAA+TGG | 0.432994 | 7.4:+4751912 | MS.gene050792:CDS |
| GTATACGACGGCGAAGATAT+CGG | 0.442192 | 7.4:+4749916 | MS.gene050792:CDS |
| GTCAGAAGTCACCCCTGAAT+CGG | 0.449046 | 7.4:-4752784 | None:intergenic |
| GAATGAACAAAATGGACATA+TGG | 0.450541 | 7.4:+4752019 | MS.gene050792:CDS |
| CCCTGAATCGGGGTTTGACT+CGG | 0.450927 | 7.4:-4752772 | None:intergenic |
| TCCAGCATGAATTTCAGAAT+AGG | 0.452577 | 7.4:-4751424 | None:intergenic |
| TATGAATTACTAGGTGCAAA+AGG | 0.459744 | 7.4:-4751780 | None:intergenic |
| ACCGTTTGGTCTTAATGGCT+GGG | 0.462546 | 7.4:-4751742 | None:intergenic |
| CTTTGGACTACTCTCTTAGC+TGG | 0.463279 | 7.4:+4751282 | MS.gene050792:CDS |
| TGTGTATCACCACTGGTTAG+TGG | 0.463529 | 7.4:-4751312 | None:intergenic |
| TGGATAATTCATCAGCAGTC+TGG | 0.469032 | 7.4:+4752723 | MS.gene050792:CDS |
| ATGGTGGTAAAACAAAATTT+AGG | 0.469766 | 7.4:+4752338 | MS.gene050792:CDS |
| CCCTCCATCAACTGCGAATG+AGG | 0.471098 | 7.4:+4751187 | MS.gene050792:CDS |
| GGAGCACTACTCTTAGGATT+CGG | 0.471163 | 7.4:-4751978 | None:intergenic |
| CGACATGCTGTTCTGGGCAG+TGG | 0.473730 | 7.4:+4751107 | MS.gene050792:CDS |
| ATAACTGATAGCATCCGTTA+TGG | 0.474762 | 7.4:+4752254 | MS.gene050792:CDS |
| ATTGGCGCGCTCAAAGTTTG+TGG | 0.477749 | 7.4:-4751640 | None:intergenic |
| TTGCAGCAGCTAAGAGTGTA+TGG | 0.479275 | 7.4:+4751259 | MS.gene050792:CDS |
| ACATTTGGATTATAGTTGCC+AGG | 0.480104 | 7.4:-4751600 | None:intergenic |
| GGTTGCAATGGAAAACCGTT+TGG | 0.481798 | 7.4:-4751756 | None:intergenic |
| GGTGTCACCGTAGGCGGAGA+TGG | 0.483267 | 7.4:-4750047 | None:intergenic |
| TAAGATCAGATGGGCGGAGG+TGG | 0.484744 | 7.4:+4749869 | None:intergenic |
| TCAGTTATATTCTTCTCAGT+TGG | 0.486950 | 7.4:-4752239 | None:intergenic |
| AACTTCCCTCTAATGGTAAG+TGG | 0.488285 | 7.4:+4752120 | MS.gene050792:CDS |
| CCGTAGGCGGAGATGGAAAC+GGG | 0.489402 | 7.4:-4750040 | None:intergenic |
| CCCGTTTCCATCTCCGCCTA+CGG | 0.493859 | 7.4:+4750040 | MS.gene050792:CDS |
| GAAAACTGTCATGTTCCTAA+AGG | 0.494196 | 7.4:+4749953 | MS.gene050792:CDS |
| TGGAAGTGTGTAAATCCCTT+AGG | 0.494619 | 7.4:+4752398 | MS.gene050792:CDS |
| CAAATGTTCAAAACGGAGGA+AGG | 0.495613 | 7.4:+4751451 | MS.gene050792:CDS |
| CTGTTTAGGATTTCCACCTA+AGG | 0.496032 | 7.4:-4752414 | None:intergenic |
| CCTACACACTCGACAGCAAT+GGG | 0.496891 | 7.4:+4752089 | MS.gene050792:CDS |
| TTGGTAAGAATGACAAACTC+TGG | 0.500710 | 7.4:+4752378 | MS.gene050792:CDS |
| AAATTGTTGCCAACAGTCCT+AGG | 0.502255 | 7.4:-4751843 | None:intergenic |
| CCGAGTCAAACCCCGATTCA+GGG | 0.503212 | 7.4:+4752772 | MS.gene050792:CDS |
| CCCTATTCTGAAATTCATGC+TGG | 0.505000 | 7.4:+4751423 | MS.gene050792:CDS |
| TTTGGAGAATATGAATTACT+AGG | 0.506209 | 7.4:-4751789 | None:intergenic |
| AACAACCCCTGCTGGTAGAT+CGG | 0.506607 | 7.4:+4752475 | MS.gene050792:CDS |
| CTCCGTTGCGGAACAGTGCG+GGG | 0.510872 | 7.4:-4751942 | None:intergenic |
| TCGGTCCATTTGGTTGACTC+GGG | 0.511015 | 7.4:-4751515 | None:intergenic |
| ACCGTAGGCGGAGATGGAAA+CGG | 0.511972 | 7.4:-4750041 | None:intergenic |
| AATCCAAATGTTCCTCAAAG+TGG | 0.513048 | 7.4:+4751612 | MS.gene050792:CDS |
| AATGTTCAAAACGGAGGAAG+GGG | 0.517066 | 7.4:+4751453 | MS.gene050792:CDS |
| TAATTCATCAGCAGTCTGGC+TGG | 0.517933 | 7.4:+4752727 | MS.gene050792:CDS |
| TGACTCGGGTTTCTCCAAGT+TGG | 0.524058 | 7.4:-4751501 | None:intergenic |
| TATTTCTGTAGGTACGAAGC+AGG | 0.525565 | 7.4:+4752615 | MS.gene050792:intron |
| CCTGAATCGGGGTTTGACTC+GGG | 0.525798 | 7.4:-4752771 | None:intergenic |
| GTTGGCAACAATTTCAGTAC+AGG | 0.526636 | 7.4:+4751852 | MS.gene050792:CDS |
| TCCCAGCCATTAAGACCAAA+CGG | 0.527762 | 7.4:+4751741 | MS.gene050792:CDS |
| TTTGTGGTTGATCCACTTTG+AGG | 0.528704 | 7.4:-4751624 | None:intergenic |
| CAACTACACCGGTGCCACCT+AGG | 0.529046 | 7.4:+4751826 | MS.gene050792:CDS |
| GATATCAGGGTAGACCAACT+TGG | 0.529804 | 7.4:+4751487 | MS.gene050792:CDS |
| ATTATTGCCGATCTACCAGC+AGG | 0.530418 | 7.4:-4752482 | None:intergenic |
| CACCGATGTTAAGAAAGCTC+TGG | 0.531404 | 7.4:+4752295 | MS.gene050792:CDS |
| ACTTCCCTCTAATGGTAAGT+GGG | 0.534715 | 7.4:+4752121 | MS.gene050792:CDS |
| GGAAATTCAAATGTTCAAAA+CGG | 0.536448 | 7.4:+4751444 | MS.gene050792:CDS |
| GAAAGCTCTGGAGAGTGCTA+TGG | 0.538754 | 7.4:+4752307 | MS.gene050792:CDS |
| CCAACAGTCCTAGGTGGCAC+CGG | 0.539658 | 7.4:-4751834 | None:intergenic |
| ACCTACACACTCGACAGCAA+TGG | 0.545629 | 7.4:+4752088 | MS.gene050792:CDS |
| TTCAAATCTCCACTCCGTTG+CGG | 0.550016 | 7.4:-4751954 | None:intergenic |
| GTCTGAGCAGCATTTGAGAC+AGG | 0.550440 | 7.4:-4751384 | None:intergenic |
| GGTTATCTTGAAGTCCAACT+GGG | 0.555376 | 7.4:-4751554 | None:intergenic |
| CGGTGTAGTTGCAAAAGTAT+GGG | 0.556383 | 7.4:-4751814 | None:intergenic |
| CTGCGCAATTGCATGTGGAT+CGG | 0.560127 | 7.4:-4749978 | None:intergenic |
| TGTTTAGGATTTCCACCTAA+GGG | 0.560176 | 7.4:-4752413 | None:intergenic |
| CCGGTGCCACCTAGGACTGT+TGG | 0.561100 | 7.4:+4751834 | MS.gene050792:CDS |
| GGATTTGATTCTAGATATCA+GGG | 0.561545 | 7.4:+4751474 | MS.gene050792:CDS |
| CTCTTAGCTGCTGCAACTAG+TGG | 0.562484 | 7.4:-4751252 | None:intergenic |
| TGGACTACTCTCTTAGCTGG+AGG | 0.562680 | 7.4:+4751285 | MS.gene050792:CDS |
| AGGCCTTGTACATATTCAGA+AGG | 0.565970 | 7.4:-4752164 | None:intergenic |
| AAATGTTCAAAACGGAGGAA+GGG | 0.566489 | 7.4:+4751452 | MS.gene050792:CDS |
| GGCGAAGATATCGGTATGGT+GGG | 0.567110 | 7.4:+4749925 | MS.gene050792:CDS |
| GGTGCTTTAACGCTGTATGT+TGG | 0.568779 | 7.4:+4752359 | MS.gene050792:CDS |
| ATAAATAATTCGCAGGTGCA+GGG | 0.569096 | 7.4:-4751134 | None:intergenic |
| AGAAACCCGAGTCAACCAAA+TGG | 0.569109 | 7.4:+4751510 | MS.gene050792:CDS |
| CGGCGAAGATATCGGTATGG+TGG | 0.569397 | 7.4:+4749924 | MS.gene050792:CDS |
| GAAATCAATAAATAATTCGC+AGG | 0.575414 | 7.4:-4751141 | None:intergenic |
| CTTCCCTCTAATGGTAAGTG+GGG | 0.577253 | 7.4:+4752122 | MS.gene050792:CDS |
| TCCTCATTCGCAGTTGATGG+AGG | 0.578055 | 7.4:-4751188 | None:intergenic |
| GGTTTGACTCGGGAAGAGTA+AGG | 0.583411 | 7.4:-4752761 | None:intergenic |
| GGTGCAAAAGGAGGTTGCAA+TGG | 0.586116 | 7.4:-4751768 | None:intergenic |
| CGCACTGTTCCGCAACGGAG+TGG | 0.587754 | 7.4:+4751945 | MS.gene050792:CDS |
| CTCCAGAGCTTTCTTAACAT+CGG | 0.590270 | 7.4:-4752297 | None:intergenic |
| ACGAGTGGTGTCACCGTAGG+CGG | 0.595030 | 7.4:-4750053 | None:intergenic |
| TGCTCAGACACAGCAACAGG+GGG | 0.595588 | 7.4:+4751398 | MS.gene050792:CDS |
| CAGCACGCGCTTTCTAGCAC+CGG | 0.596449 | 7.4:+4750091 | MS.gene050792:CDS |
| GAGTTGTTGTGTATCACCAC+TGG | 0.599166 | 7.4:-4751319 | None:intergenic |
| AGATAAGATCAGATGGGCGG+AGG | 0.599612 | 7.4:+4749866 | None:intergenic |
| CCTCATTCGCAGTTGATGGA+GGG | 0.600072 | 7.4:-4751187 | None:intergenic |
| ACTTGTATAGTTTCAGAAGA+CGG | 0.600079 | 7.4:-4751360 | None:intergenic |
| AAACCTTCTGAATATGTACA+AGG | 0.601145 | 7.4:+4752161 | MS.gene050792:CDS |
| CCCAGAACAGCATGTCGACA+AGG | 0.601862 | 7.4:-4751101 | None:intergenic |
| TCACTTAATCATGTTCCCGC+CGG | 0.605523 | 7.4:+4750118 | MS.gene050792:CDS |
| GATCCCCACTTACCATTAGA+GGG | 0.607911 | 7.4:-4752125 | None:intergenic |
| CACTCCGTTGCGGAACAGTG+CGG | 0.607972 | 7.4:-4751944 | None:intergenic |
| AAGTGTGTAAATCCCTTAGG+TGG | 0.612305 | 7.4:+4752401 | MS.gene050792:CDS |
| TGCTATGGAGCAGCAGATGG+TGG | 0.612792 | 7.4:+4752322 | MS.gene050792:CDS |
| TCACCATGTTCAATATCTGA+AGG | 0.616291 | 7.4:-4752686 | None:intergenic |
| CTTGTTCGTATGAACTATTG+TGG | 0.616869 | 7.4:+4750016 | MS.gene050792:CDS |
| TCCGTTGCGGAACAGTGCGG+GGG | 0.622717 | 7.4:-4751941 | None:intergenic |
| CCCATTGCTGTCGAGTGTGT+AGG | 0.626853 | 7.4:-4752089 | None:intergenic |
| CGAGTCAAACCCCGATTCAG+GGG | 0.629328 | 7.4:+4752773 | MS.gene050792:CDS |
| CGACGGCGAAGATATCGGTA+TGG | 0.634124 | 7.4:+4749921 | MS.gene050792:CDS |
| AGCAATAATGGTAATCAACA+AGG | 0.635068 | 7.4:+4751678 | MS.gene050792:CDS |
| CTGCTCAGACACAGCAACAG+GGG | 0.637667 | 7.4:+4751397 | MS.gene050792:CDS |
| TATTGCCGATCTACCAGCAG+GGG | 0.638854 | 7.4:-4752480 | None:intergenic |
| ATATTCTGCGCAATTGCATG+TGG | 0.639515 | 7.4:-4749983 | None:intergenic |
| TCGGGAAGAGTAAGGATGAG+TGG | 0.640711 | 7.4:-4752753 | None:intergenic |
| GAGTGCTATGGAGCAGCAGA+TGG | 0.644619 | 7.4:+4752319 | MS.gene050792:CDS |
| GATGCTTGAGATCTCCATAA+CGG | 0.644912 | 7.4:-4752268 | None:intergenic |
| AATTCAAATGTTCAAAACGG+AGG | 0.648741 | 7.4:+4751447 | MS.gene050792:CDS |
| GCTGCTCAGACACAGCAACA+GGG | 0.650440 | 7.4:+4751396 | MS.gene050792:CDS |
| AATGTAAACAATTATCGACC+TGG | 0.651786 | 7.4:+4751582 | MS.gene050792:CDS |
| TCCATCAACTGCGAATGAGG+AGG | 0.652227 | 7.4:+4751190 | MS.gene050792:CDS |
| ACCACTCAAGGCTATCCACA+TGG | 0.657824 | 7.4:+4752053 | MS.gene050792:CDS |
| AGCGCGTGCTGTACAGACGC+AGG | 0.658760 | 7.4:-4750079 | None:intergenic |
| GTGCATAGCAGTACCACTCA+AGG | 0.659605 | 7.4:+4752041 | MS.gene050792:CDS |
| GTATCACCACTGGTTAGTGG+AGG | 0.662670 | 7.4:-4751309 | None:intergenic |
| CAGAAGTCACCCCTGAATCG+GGG | 0.665735 | 7.4:-4752782 | None:intergenic |
| CGCGGAGGCGCAGTATACGA+CGG | 0.668480 | 7.4:+4749904 | MS.gene050792:CDS |
| TATACGAGTGGTGTCACCGT+AGG | 0.671792 | 7.4:-4750056 | None:intergenic |
| CGGAGATAAGATCAGATGGG+CGG | 0.673527 | 7.4:+4749863 | None:intergenic |
| TGTCCTTCAGATATTGAACA+TGG | 0.677199 | 7.4:+4752683 | MS.gene050792:CDS |
| TTATTGCCGATCTACCAGCA+GGG | 0.679539 | 7.4:-4752481 | None:intergenic |
| GTTATCTTGAAGTCCAACTG+GGG | 0.686988 | 7.4:-4751553 | None:intergenic |
| AGGTGGAGCGACAACTAACG+CGG | 0.688181 | 7.4:+4749886 | MS.gene050792:CDS |
| GGAGGACCTCCACTAACCAG+TGG | 0.691674 | 7.4:+4751303 | MS.gene050792:CDS |
| GGTTGATATTCTGGACCATG+TGG | 0.700176 | 7.4:-4752068 | None:intergenic |
| TTATCTTGAAGTCCAACTGG+GGG | 0.703666 | 7.4:-4751552 | None:intergenic |
| TACAGACGCAGGTATACGAG+TGG | 0.706607 | 7.4:-4750068 | None:intergenic |
| GAATTACTAGGTGCAAAAGG+AGG | 0.707826 | 7.4:-4751777 | None:intergenic |
| TGGAGCGACAACTAACGCGG+AGG | 0.712925 | 7.4:+4749889 | MS.gene050792:CDS |
| TTGTTGCCAACAGTCCTAGG+TGG | 0.727786 | 7.4:-4751840 | None:intergenic |
| GGAAATCATCAAAATCAACA+GGG | 0.731421 | 7.4:+4751699 | MS.gene050792:CDS |
| GCTCAGACACAGCAACAGGG+GGG | 0.746430 | 7.4:+4751399 | MS.gene050792:CDS |
| ACCATGTGGATAGCCTTGAG+TGG | 0.749894 | 7.4:-4752054 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GATAATTGTTTACATTATTA+CGG | - | chr7.4:4751578-4751597 | None:intergenic | 15.0% |
| !!! | ATGAATATAGTCTATTTTAT+TGG | - | chr7.4:4752557-4752576 | None:intergenic | 15.0% |
| !!! | ATGAATTATCCATTTTTTAT+GGG | - | chr7.4:4752715-4752734 | None:intergenic | 15.0% |
| !!! | GATGAATTATCCATTTTTTA+TGG | - | chr7.4:4752716-4752735 | None:intergenic | 20.0% |
| !!! | TGCGAATTATTTATTGATTT+CGG | + | chr7.4:4751143-4751162 | MS.gene050792:CDS | 20.0% |
| !!! | TTGAATTTTTTCTCAGTATA+AGG | + | chr7.4:4750375-4750394 | MS.gene050792:intron | 20.0% |
| ! | AACATGATTAAGTGAAATTC+CGG | - | chr7.4:4750113-4750132 | None:intergenic | 25.0% |
| ! | AATAATAAACTTCCCTCTAA+TGG | + | chr7.4:4752113-4752132 | MS.gene050792:CDS | 25.0% |
| ! | ATGGTGGTAAAACAAAATTT+AGG | + | chr7.4:4752338-4752357 | MS.gene050792:CDS | 25.0% |
| ! | GAAATCAATAAATAATTCGC+AGG | - | chr7.4:4751144-4751163 | None:intergenic | 25.0% |
| ! | GGAAATTCAAATGTTCAAAA+CGG | + | chr7.4:4751444-4751463 | MS.gene050792:CDS | 25.0% |
| ! | TGTTGAACAGTTAATACATT+TGG | + | chr7.4:4750942-4750961 | MS.gene050792:intron | 25.0% |
| ! | TTATCAAAATTACACCTCAA+AGG | - | chr7.4:4750802-4750821 | None:intergenic | 25.0% |
| ! | TTTGGAGAATATGAATTACT+AGG | - | chr7.4:4751792-4751811 | None:intergenic | 25.0% |
| !! | TGTTGATTGAAAGATAGATT+TGG | + | chr7.4:4750879-4750898 | MS.gene050792:intron | 25.0% |
| !! | TTCATTTCTGTGATTGATTT+GGG | + | chr7.4:4750265-4750284 | MS.gene050792:intron | 25.0% |
| !!! | AATTTCACACTATTGATTTG+TGG | - | chr7.4:4751001-4751020 | None:intergenic | 25.0% |
| !!! | ATGGTTTTAAATTGTGATTG+CGG | + | chr7.4:4750414-4750433 | MS.gene050792:intron | 25.0% |
| !!! | ATTTTATTTATCACGTGATG+CGG | + | chr7.4:4750585-4750604 | MS.gene050792:intron | 25.0% |
| !!! | CTTTTTTCATGTTTGGTTAT+AGG | + | chr7.4:4751051-4751070 | MS.gene050792:intron | 25.0% |
| !!! | GAGGTGTAATTTTGATAATT+TGG | + | chr7.4:4750804-4750823 | MS.gene050792:intron | 25.0% |
| !!! | GCGAATTATTTATTGATTTC+GGG | + | chr7.4:4751144-4751163 | MS.gene050792:CDS | 25.0% |
| !!! | GTGTGAAATTTTGATACATT+TGG | + | chr7.4:4751011-4751030 | MS.gene050792:intron | 25.0% |
| !!! | TGAATCTATTCTATTTCTGT+AGG | + | chr7.4:4752604-4752623 | MS.gene050792:intron | 25.0% |
| !!! | TGTTTTAAAGATCTTGCTTT+GGG | + | chr7.4:4752657-4752676 | MS.gene050792:CDS | 25.0% |
| AAACCTTCTGAATATGTACA+AGG | + | chr7.4:4752161-4752180 | MS.gene050792:CDS | 30.0% | |
| AATGTAAACAATTATCGACC+TGG | + | chr7.4:4751582-4751601 | MS.gene050792:CDS | 30.0% | |
| AATTCAAATGTTCAAAACGG+AGG | + | chr7.4:4751447-4751466 | MS.gene050792:CDS | 30.0% | |
| AATTTCGTCCCAAATTTCTT+TGG | - | chr7.4:4752444-4752463 | None:intergenic | 30.0% | |
| ACTTGTATAGTTTCAGAAGA+CGG | - | chr7.4:4751363-4751382 | None:intergenic | 30.0% | |
| AGAATAGATTCATCAGAATG+CGG | - | chr7.4:4752596-4752615 | None:intergenic | 30.0% | |
| AGATCAACGAATGAACAAAA+TGG | + | chr7.4:4752011-4752030 | MS.gene050792:CDS | 30.0% | |
| AGCAATAATGGTAATCAACA+AGG | + | chr7.4:4751678-4751697 | MS.gene050792:CDS | 30.0% | |
| AGCTATGATTTATGAACTGT+CGG | + | chr7.4:4750186-4750205 | MS.gene050792:intron | 30.0% | |
| AGGAAATCATCAAAATCAAC+AGG | + | chr7.4:4751698-4751717 | MS.gene050792:CDS | 30.0% | |
| ATATCTGGTTATCCCAATAA+TGG | + | chr7.4:4751912-4751931 | MS.gene050792:CDS | 30.0% | |
| CAAGTAAAACAACACCTATA+AGG | - | chr7.4:4752187-4752206 | None:intergenic | 30.0% | |
| GAATGAACAAAATGGACATA+TGG | + | chr7.4:4752019-4752038 | MS.gene050792:CDS | 30.0% | |
| GGAAATCATCAAAATCAACA+GGG | + | chr7.4:4751699-4751718 | MS.gene050792:CDS | 30.0% | |
| GGATTTGATTCTAGATATCA+GGG | + | chr7.4:4751474-4751493 | MS.gene050792:CDS | 30.0% | |
| GTTCATTTCTGTGATTGATT+TGG | + | chr7.4:4750264-4750283 | MS.gene050792:intron | 30.0% | |
| TATGAATTACTAGGTGCAAA+AGG | - | chr7.4:4751783-4751802 | None:intergenic | 30.0% | |
| TCAGTTATATTCTTCTCAGT+TGG | - | chr7.4:4752242-4752261 | None:intergenic | 30.0% | |
| TGGTGATAACCCATAAAAAA+TGG | + | chr7.4:4752703-4752722 | MS.gene050792:CDS | 30.0% | |
| TGTACATATTCAGAAGGTTT+AGG | - | chr7.4:4752161-4752180 | None:intergenic | 30.0% | |
| TTACCATTATTGCTCCATAA+TGG | - | chr7.4:4751672-4751691 | None:intergenic | 30.0% | |
| TTTCACACAATCAATCAACA+CGG | - | chr7.4:4750837-4750856 | None:intergenic | 30.0% | |
| ! | GGTATTAAGAATCTGATTTG+TGG | + | chr7.4:4750631-4750650 | MS.gene050792:intron | 30.0% |
| !!! | ATTGATTTGGGTATTTTACG+CGG | + | chr7.4:4750277-4750296 | MS.gene050792:intron | 30.0% |
| !!! | GTGTTTTAAAGATCTTGCTT+TGG | + | chr7.4:4752656-4752675 | MS.gene050792:CDS | 30.0% |
| AAATGTTCAAAACGGAGGAA+GGG | + | chr7.4:4751452-4751471 | MS.gene050792:CDS | 35.0% | |
| AACAGCACTCCAAAGAAATT+TGG | + | chr7.4:4752432-4752451 | MS.gene050792:CDS | 35.0% | |
| AATAAATAATTCGCAGGTGC+AGG | - | chr7.4:4751138-4751157 | None:intergenic | 35.0% | |
| AATAGATTCATCAGAATGCG+GGG | - | chr7.4:4752594-4752613 | None:intergenic | 35.0% | |
| AATCCAAATGTTCCTCAAAG+TGG | + | chr7.4:4751612-4751631 | MS.gene050792:CDS | 35.0% | |
| AATCGAAGTAAGTTCGTTAC+CGG | - | chr7.4:4750140-4750159 | None:intergenic | 35.0% | |
| ACAGCACTCCAAAGAAATTT+GGG | + | chr7.4:4752433-4752452 | MS.gene050792:CDS | 35.0% | |
| ACATTTGGATTATAGTTGCC+AGG | - | chr7.4:4751603-4751622 | None:intergenic | 35.0% | |
| ATAAATAATTCGCAGGTGCA+GGG | - | chr7.4:4751137-4751156 | None:intergenic | 35.0% | |
| ATAACTGATAGCATCCGTTA+TGG | + | chr7.4:4752254-4752273 | MS.gene050792:CDS | 35.0% | |
| ATGTTCAGATTGCCAATATC+TGG | - | chr7.4:4751894-4751913 | None:intergenic | 35.0% | |
| ATTATAGCCCTGACTTATTG+CGG | + | chr7.4:4750529-4750548 | MS.gene050792:intron | 35.0% | |
| ATTGGCAATCTGAACATATC+TGG | + | chr7.4:4751897-4751916 | MS.gene050792:CDS | 35.0% | |
| CCAGCATGAATTTCAGAATA+GGG | - | chr7.4:4751426-4751445 | None:intergenic | 35.0% | |
| CTTGTTCGTATGAACTATTG+TGG | + | chr7.4:4750016-4750035 | MS.gene050792:CDS | 35.0% | |
| GAAAACTGTCATGTTCCTAA+AGG | + | chr7.4:4749953-4749972 | MS.gene050792:CDS | 35.0% | |
| GAATAGATTCATCAGAATGC+GGG | - | chr7.4:4752595-4752614 | None:intergenic | 35.0% | |
| GATCCATTATGGAGCAATAA+TGG | + | chr7.4:4751666-4751685 | MS.gene050792:CDS | 35.0% | |
| GGGATTTGATTCTAGATATC+AGG | + | chr7.4:4751473-4751492 | MS.gene050792:CDS | 35.0% | |
| GTGTATTGCTGTAATTTCGT+GGG | + | chr7.4:4750562-4750581 | MS.gene050792:intron | 35.0% | |
| TATTGTGATAGCTGATACTG+TGG | + | chr7.4:4750453-4750472 | MS.gene050792:intron | 35.0% | |
| TCACCATGTTCAATATCTGA+AGG | - | chr7.4:4752689-4752708 | None:intergenic | 35.0% | |
| TCCAGCATGAATTTCAGAAT+AGG | - | chr7.4:4751427-4751446 | None:intergenic | 35.0% | |
| TGGTTCACTTGAAACATTCA+CGG | + | chr7.4:4750899-4750918 | MS.gene050792:intron | 35.0% | |
| TGTCCTTCAGATATTGAACA+TGG | + | chr7.4:4752683-4752702 | MS.gene050792:CDS | 35.0% | |
| TGTGTATTGCTGTAATTTCG+TGG | + | chr7.4:4750561-4750580 | MS.gene050792:intron | 35.0% | |
| TGTTCATTCGTTGATCTTAC+CGG | - | chr7.4:4752008-4752027 | None:intergenic | 35.0% | |
| TTGGTAAGAATGACAAACTC+TGG | + | chr7.4:4752378-4752397 | MS.gene050792:CDS | 35.0% | |
| ! | GAATATGTACAAGGCCTTAT+AGG | + | chr7.4:4752170-4752189 | MS.gene050792:CDS | 35.0% |
| ! | GTTGCAAAAGTATGGGAATT+TGG | - | chr7.4:4751810-4751829 | None:intergenic | 35.0% |
| ! | TGTTTAGGATTTCCACCTAA+GGG | - | chr7.4:4752416-4752435 | None:intergenic | 35.0% |
| !! | AAACATTCACGGTTGATTTG+TGG | + | chr7.4:4750910-4750929 | MS.gene050792:intron | 35.0% |
| !! | AGGTGATTTGATTTGAAGCA+TGG | + | chr7.4:4750395-4750414 | MS.gene050792:intron | 35.0% |
| !! | ATTTCTTTGGAGTGCTGTTT+AGG | - | chr7.4:4752431-4752450 | None:intergenic | 35.0% |
| !!! | GCTGAAGCTTTTTTCATGTT+TGG | + | chr7.4:4751044-4751063 | MS.gene050792:intron | 35.0% |
| !!! | GGCATTTTTTAGTGAGTTCA+GGG | - | chr7.4:4752210-4752229 | None:intergenic | 35.0% |
| !!! | TGGCATTTTTTAGTGAGTTC+AGG | - | chr7.4:4752211-4752230 | None:intergenic | 35.0% |
| AAATTGTTGCCAACAGTCCT+AGG | - | chr7.4:4751846-4751865 | None:intergenic | 40.0% | |
| AACTTCCCTCTAATGGTAAG+TGG | + | chr7.4:4752120-4752139 | MS.gene050792:CDS | 40.0% | |
| AAGTGTGTAAATCCCTTAGG+TGG | + | chr7.4:4752401-4752420 | MS.gene050792:CDS | 40.0% | |
| AATGTTCAAAACGGAGGAAG+GGG | + | chr7.4:4751453-4751472 | MS.gene050792:CDS | 40.0% | |
| ACTTCCCTCTAATGGTAAGT+GGG | + | chr7.4:4752121-4752140 | MS.gene050792:CDS | 40.0% | |
| ATATTCTGCGCAATTGCATG+TGG | - | chr7.4:4749986-4750005 | None:intergenic | 40.0% | |
| CAAATGTTCAAAACGGAGGA+AGG | + | chr7.4:4751451-4751470 | MS.gene050792:CDS | 40.0% | |
| CGCAGTTTGTACTGTCTATA+TGG | + | chr7.4:4750610-4750629 | MS.gene050792:intron | 40.0% | |
| CTCCAGAGCTTTCTTAACAT+CGG | - | chr7.4:4752300-4752319 | None:intergenic | 40.0% | |
| GAATTACTAGGTGCAAAAGG+AGG | - | chr7.4:4751780-4751799 | None:intergenic | 40.0% | |
| GATGCTTGAGATCTCCATAA+CGG | - | chr7.4:4752271-4752290 | None:intergenic | 40.0% | |
| GGTTATCTTGAAGTCCAACT+GGG | - | chr7.4:4751557-4751576 | None:intergenic | 40.0% | |
| GTTATCTTGAAGTCCAACTG+GGG | - | chr7.4:4751556-4751575 | None:intergenic | 40.0% | |
| GTTGGCAACAATTTCAGTAC+AGG | + | chr7.4:4751852-4751871 | MS.gene050792:CDS | 40.0% | |
| TGGATAATTCATCAGCAGTC+TGG | + | chr7.4:4752723-4752742 | MS.gene050792:CDS | 40.0% | |
| TTATCTTGAAGTCCAACTGG+GGG | - | chr7.4:4751555-4751574 | None:intergenic | 40.0% | |
| TTTGTGGTTGATCCACTTTG+AGG | - | chr7.4:4751627-4751646 | None:intergenic | 40.0% | |
| ! | AATTTTCTAACAACCCCTGC+TGG | + | chr7.4:4752467-4752486 | MS.gene050792:CDS | 40.0% |
| ! | AGAATGCGGGGATATCTTTT+AGG | - | chr7.4:4752582-4752601 | None:intergenic | 40.0% |
| ! | AGGCCTTGTACATATTCAGA+AGG | - | chr7.4:4752167-4752186 | None:intergenic | 40.0% |
| ! | CCATACTTTTGCAACTACAC+CGG | + | chr7.4:4751815-4751834 | MS.gene050792:CDS | 40.0% |
| ! | CGGTGTAGTTGCAAAAGTAT+GGG | - | chr7.4:4751817-4751836 | None:intergenic | 40.0% |
| ! | CTGTTTAGGATTTCCACCTA+AGG | - | chr7.4:4752417-4752436 | None:intergenic | 40.0% |
| ! | GATCCACTTTGAGGAACATT+TGG | - | chr7.4:4751618-4751637 | None:intergenic | 40.0% |
| ! | TATTTCTGTAGGTACGAAGC+AGG | + | chr7.4:4752615-4752634 | MS.gene050792:intron | 40.0% |
| ! | TGGAAGTGTGTAAATCCCTT+AGG | + | chr7.4:4752398-4752417 | MS.gene050792:CDS | 40.0% |
| !! | CCCTATTCTGAAATTCATGC+TGG | + | chr7.4:4751423-4751442 | MS.gene050792:CDS | 40.0% |
| !! | GAGTGTGTAGGTTGATATTC+TGG | - | chr7.4:4752080-4752099 | None:intergenic | 40.0% |
| !! | GCTCCATAATGGATCAGAAT+TGG | - | chr7.4:4751661-4751680 | None:intergenic | 40.0% |
| !! | GGAAAACCGTTTGGTCTTAA+TGG | - | chr7.4:4751750-4751769 | None:intergenic | 40.0% |
| AATGGTAAGTGGGGATCTTC+AGG | + | chr7.4:4752131-4752150 | MS.gene050792:CDS | 45.0% | |
| ACACCTCAAAGGCTCAAGAA+AGG | - | chr7.4:4750791-4750810 | None:intergenic | 45.0% | |
| AGAAACCCGAGTCAACCAAA+TGG | + | chr7.4:4751510-4751529 | MS.gene050792:CDS | 45.0% | |
| AGATCCCCACTTACCATTAG+AGG | - | chr7.4:4752129-4752148 | None:intergenic | 45.0% | |
| ATTATTGCCGATCTACCAGC+AGG | - | chr7.4:4752485-4752504 | None:intergenic | 45.0% | |
| CACCGATGTTAAGAAAGCTC+TGG | + | chr7.4:4752295-4752314 | MS.gene050792:CDS | 45.0% | |
| CCAATATCTGGCACAGTTCT+AGG | - | chr7.4:4751882-4751901 | None:intergenic | 45.0% | |
| CCGGTGTAGTTGCAAAAGTA+TGG | - | chr7.4:4751818-4751837 | None:intergenic | 45.0% | |
| CCTAGAACTGTGCCAGATAT+TGG | + | chr7.4:4751879-4751898 | MS.gene050792:CDS | 45.0% | |
| CGGGGGTTATGACCATTATT+GGG | - | chr7.4:4751927-4751946 | None:intergenic | 45.0% | |
| CGGTTATCTTGAAGTCCAAC+TGG | - | chr7.4:4751558-4751577 | None:intergenic | 45.0% | |
| CTTCCCTCTAATGGTAAGTG+GGG | + | chr7.4:4752122-4752141 | MS.gene050792:CDS | 45.0% | |
| CTTCCTTTCTTGAGCCTTTG+AGG | + | chr7.4:4750785-4750804 | MS.gene050792:intron | 45.0% | |
| CTTCTCAGTTGGCATCATCT+TGG | - | chr7.4:4752231-4752250 | None:intergenic | 45.0% | |
| CTTGTTTGCTTCCTTTCTCG+AGG | + | chr7.4:4750674-4750693 | MS.gene050792:intron | 45.0% | |
| CTTTGGACTACTCTCTTAGC+TGG | + | chr7.4:4751282-4751301 | MS.gene050792:CDS | 45.0% | |
| GAGTTGTTGTGTATCACCAC+TGG | - | chr7.4:4751322-4751341 | None:intergenic | 45.0% | |
| GATATCAGGGTAGACCAACT+TGG | + | chr7.4:4751487-4751506 | MS.gene050792:CDS | 45.0% | |
| GATCCCCACTTACCATTAGA+GGG | - | chr7.4:4752128-4752147 | None:intergenic | 45.0% | |
| GCAAACACCGCAATAAGTCA+GGG | - | chr7.4:4750539-4750558 | None:intergenic | 45.0% | |
| GCGCCAATTCTGATCCATTA+TGG | + | chr7.4:4751655-4751674 | MS.gene050792:CDS | 45.0% | |
| GGTCTTAATGGCTGGGAATA+TGG | - | chr7.4:4751738-4751757 | None:intergenic | 45.0% | |
| GGTGCTTTAACGCTGTATGT+TGG | + | chr7.4:4752359-4752378 | MS.gene050792:CDS | 45.0% | |
| GGTTGCAATGGAAAACCGTT+TGG | - | chr7.4:4751759-4751778 | None:intergenic | 45.0% | |
| GTATACGACGGCGAAGATAT+CGG | + | chr7.4:4749916-4749935 | MS.gene050792:CDS | 45.0% | |
| TAAGAGTAGTGCTCCACTTC+CGG | + | chr7.4:4751986-4752005 | MS.gene050792:CDS | 45.0% | |
| TAATTCATCAGCAGTCTGGC+TGG | + | chr7.4:4752727-4752746 | MS.gene050792:CDS | 45.0% | |
| TCACTTAATCATGTTCCCGC+CGG | + | chr7.4:4750118-4750137 | MS.gene050792:CDS | 45.0% | |
| TCCCAGCCATTAAGACCAAA+CGG | + | chr7.4:4751741-4751760 | MS.gene050792:CDS | 45.0% | |
| TGCTGGTAGATCGGCAATAA+TGG | + | chr7.4:4752484-4752503 | MS.gene050792:CDS | 45.0% | |
| TTATTGCCGATCTACCAGCA+GGG | - | chr7.4:4752484-4752503 | None:intergenic | 45.0% | |
| TTCAAATCTCCACTCCGTTG+CGG | - | chr7.4:4751957-4751976 | None:intergenic | 45.0% | |
| TTCATGGCTTTCGGTCCATT+TGG | - | chr7.4:4751528-4751547 | None:intergenic | 45.0% | |
| TTCGGTCCATTTGGTTGACT+CGG | - | chr7.4:4751519-4751538 | None:intergenic | 45.0% | |
| TTCGTTGATCTTACCGGAAG+TGG | - | chr7.4:4752002-4752021 | None:intergenic | 45.0% | |
| TTTGACGAGAATCAGCAACG+TGG | + | chr7.4:4750320-4750339 | MS.gene050792:intron | 45.0% | |
| ! | CAGCTAAGAGTGTATGGCTT+TGG | + | chr7.4:4751265-4751284 | MS.gene050792:CDS | 45.0% |
| ! | GGAGCACTACTCTTAGGATT+CGG | - | chr7.4:4751981-4752000 | None:intergenic | 45.0% |
| ! | GGTTGATATTCTGGACCATG+TGG | - | chr7.4:4752071-4752090 | None:intergenic | 45.0% |
| ! | TGTGTATCACCACTGGTTAG+TGG | - | chr7.4:4751315-4751334 | None:intergenic | 45.0% |
| ! | TTGCAGCAGCTAAGAGTGTA+TGG | + | chr7.4:4751259-4751278 | MS.gene050792:CDS | 45.0% |
| !! | AACCGTTTGGTCTTAATGGC+TGG | - | chr7.4:4751746-4751765 | None:intergenic | 45.0% |
| !! | ACCGTTTGGTCTTAATGGCT+GGG | - | chr7.4:4751745-4751764 | None:intergenic | 45.0% |
| !! | AGTGGTGCAGATGCTTTTTG+AGG | - | chr7.4:4751237-4751256 | None:intergenic | 45.0% |
| AACAACCCCTGCTGGTAGAT+CGG | + | chr7.4:4752475-4752494 | MS.gene050792:CDS | 50.0% | |
| ACACCTCAAAGCCTCGAGAA+AGG | - | chr7.4:4750688-4750707 | None:intergenic | 50.0% | |
| ACCACTCAAGGCTATCCACA+TGG | + | chr7.4:4752053-4752072 | MS.gene050792:CDS | 50.0% | |
| ACCTACACACTCGACAGCAA+TGG | + | chr7.4:4752088-4752107 | MS.gene050792:CDS | 50.0% | |
| ACCTCCTCATTCGCAGTTGA+TGG | - | chr7.4:4751194-4751213 | None:intergenic | 50.0% | |
| ATTGGCGCGCTCAAAGTTTG+TGG | - | chr7.4:4751643-4751662 | None:intergenic | 50.0% | |
| CCTACACACTCGACAGCAAT+GGG | + | chr7.4:4752089-4752108 | MS.gene050792:CDS | 50.0% | |
| CCTTGTCGACATGCTGTTCT+GGG | + | chr7.4:4751101-4751120 | MS.gene050792:CDS | 50.0% | |
| CGAAGTAAGTTCGTTACCGG+CGG | - | chr7.4:4750137-4750156 | None:intergenic | 50.0% | |
| CGCAAACACCGCAATAAGTC+AGG | - | chr7.4:4750540-4750559 | None:intergenic | 50.0% | |
| CTCTTAGCTGCTGCAACTAG+TGG | - | chr7.4:4751255-4751274 | None:intergenic | 50.0% | |
| CTGCGCAATTGCATGTGGAT+CGG | - | chr7.4:4749981-4750000 | None:intergenic | 50.0% | |
| CTTCCTTTCTCGAGGCTTTG+AGG | + | chr7.4:4750682-4750701 | MS.gene050792:intron | 50.0% | |
| GAAGTAAGTTCGTTACCGGC+GGG | - | chr7.4:4750136-4750155 | None:intergenic | 50.0% | |
| GCGGGGGTTATGACCATTAT+TGG | - | chr7.4:4751928-4751947 | None:intergenic | 50.0% | |
| GGCGAAGATATCGGTATGGT+GGG | + | chr7.4:4749925-4749944 | MS.gene050792:CDS | 50.0% | |
| GGTGCAAAAGGAGGTTGCAA+TGG | - | chr7.4:4751771-4751790 | None:intergenic | 50.0% | |
| GTCAGAAGTCACCCCTGAAT+CGG | - | chr7.4:4752787-4752806 | None:intergenic | 50.0% | |
| GTGCATAGCAGTACCACTCA+AGG | + | chr7.4:4752041-4752060 | MS.gene050792:CDS | 50.0% | |
| TACAGACGCAGGTATACGAG+TGG | - | chr7.4:4750071-4750090 | None:intergenic | 50.0% | |
| TATTGCCGATCTACCAGCAG+GGG | - | chr7.4:4752483-4752502 | None:intergenic | 50.0% | |
| TCAGAAGTCACCCCTGAATC+GGG | - | chr7.4:4752786-4752805 | None:intergenic | 50.0% | |
| TCCATCAACTGCGAATGAGG+AGG | + | chr7.4:4751190-4751209 | MS.gene050792:CDS | 50.0% | |
| TCCTTGTCGACATGCTGTTC+TGG | + | chr7.4:4751100-4751119 | MS.gene050792:CDS | 50.0% | |
| TCGGGAAGAGTAAGGATGAG+TGG | - | chr7.4:4752756-4752775 | None:intergenic | 50.0% | |
| TGGACTACTCTCTTAGCTGG+AGG | + | chr7.4:4751285-4751304 | MS.gene050792:CDS | 50.0% | |
| TTGTTGCCAACAGTCCTAGG+TGG | - | chr7.4:4751843-4751862 | None:intergenic | 50.0% | |
| ! | ACCATGTGGATAGCCTTGAG+TGG | - | chr7.4:4752057-4752076 | None:intergenic | 50.0% |
| ! | GGAAGTGGAGCACTACTCTT+AGG | - | chr7.4:4751987-4752006 | None:intergenic | 50.0% |
| ! | GTATCACCACTGGTTAGTGG+AGG | - | chr7.4:4751312-4751331 | None:intergenic | 50.0% |
| ! | GTCTGAGCAGCATTTGAGAC+AGG | - | chr7.4:4751387-4751406 | None:intergenic | 50.0% |
| ! | TCGGTCCATTTGGTTGACTC+GGG | - | chr7.4:4751518-4751537 | None:intergenic | 50.0% |
| ! | TGACTCGGGTTTCTCCAAGT+TGG | - | chr7.4:4751504-4751523 | None:intergenic | 50.0% |
| ! | TGTGTGTTGCTGTGATTGCG+CGG | + | chr7.4:4750485-4750504 | MS.gene050792:intron | 50.0% |
| !! | CCTCATTCGCAGTTGATGGA+GGG | - | chr7.4:4751190-4751209 | None:intergenic | 50.0% |
| !! | GAAAGCTCTGGAGAGTGCTA+TGG | + | chr7.4:4752307-4752326 | MS.gene050792:CDS | 50.0% |
| !! | GGTTTGACTCGGGAAGAGTA+AGG | - | chr7.4:4752764-4752783 | None:intergenic | 50.0% |
| !! | TATACGAGTGGTGTCACCGT+AGG | - | chr7.4:4750059-4750078 | None:intergenic | 50.0% |
| !! | TCCTCATTCGCAGTTGATGG+AGG | - | chr7.4:4751191-4751210 | None:intergenic | 50.0% |
| ACCGTAGGCGGAGATGGAAA+CGG | - | chr7.4:4750044-4750063 | None:intergenic | 55.0% | |
| AGGTGGAGCGACAACTAACG+CGG | + | chr7.4:4749886-4749905 | MS.gene050792:CDS | 55.0% | |
| CAGAAGTCACCCCTGAATCG+GGG | - | chr7.4:4752785-4752804 | None:intergenic | 55.0% | |
| CCCAGAACAGCATGTCGACA+AGG | - | chr7.4:4751104-4751123 | None:intergenic | 55.0% | |
| CCCATTGCTGTCGAGTGTGT+AGG | - | chr7.4:4752092-4752111 | None:intergenic | 55.0% | |
| CCCTCCATCAACTGCGAATG+AGG | + | chr7.4:4751187-4751206 | MS.gene050792:CDS | 55.0% | |
| CCCTGAATCGGGGTTTGACT+CGG | - | chr7.4:4752775-4752794 | None:intergenic | 55.0% | |
| CCGAGTCAAACCCCGATTCA+GGG | + | chr7.4:4752772-4752791 | MS.gene050792:CDS | 55.0% | |
| CCTGAATCGGGGTTTGACTC+GGG | - | chr7.4:4752774-4752793 | None:intergenic | 55.0% | |
| CGACGGCGAAGATATCGGTA+TGG | + | chr7.4:4749921-4749940 | MS.gene050792:CDS | 55.0% | |
| CGAGTCAAACCCCGATTCAG+GGG | + | chr7.4:4752773-4752792 | MS.gene050792:CDS | 55.0% | |
| CGGCGAAGATATCGGTATGG+TGG | + | chr7.4:4749924-4749943 | MS.gene050792:CDS | 55.0% | |
| CTGCTCAGACACAGCAACAG+GGG | + | chr7.4:4751397-4751416 | MS.gene050792:CDS | 55.0% | |
| GAGTGCTATGGAGCAGCAGA+TGG | + | chr7.4:4752319-4752338 | MS.gene050792:CDS | 55.0% | |
| GCATGTGGATCGGAGCCTTT+AGG | - | chr7.4:4749971-4749990 | None:intergenic | 55.0% | |
| GCTGCTCAGACACAGCAACA+GGG | + | chr7.4:4751396-4751415 | MS.gene050792:CDS | 55.0% | |
| TCTTGAAGTCCAACTGGGGG+TGG | - | chr7.4:4751552-4751571 | None:intergenic | 55.0% | |
| TGCTATGGAGCAGCAGATGG+TGG | + | chr7.4:4752322-4752341 | MS.gene050792:CDS | 55.0% | |
| TGCTCAGACACAGCAACAGG+GGG | + | chr7.4:4751398-4751417 | MS.gene050792:CDS | 55.0% | |
| TGCTGCTCAGACACAGCAAC+AGG | + | chr7.4:4751395-4751414 | MS.gene050792:CDS | 55.0% | |
| ! | GGGGGTGGATTCATGGCTTT+CGG | - | chr7.4:4751537-4751556 | None:intergenic | 55.0% |
| ! | GTGTGTTGCTGTGATTGCGC+GGG | + | chr7.4:4750486-4750505 | MS.gene050792:intron | 55.0% |
| ! | TCCAACTGGGGGTGGATTCA+TGG | - | chr7.4:4751544-4751563 | None:intergenic | 55.0% |
| ACTCCGTTGCGGAACAGTGC+GGG | - | chr7.4:4751946-4751965 | None:intergenic | 60.0% | |
| CACTCCGTTGCGGAACAGTG+CGG | - | chr7.4:4751947-4751966 | None:intergenic | 60.0% | |
| CCAACAGTCCTAGGTGGCAC+CGG | - | chr7.4:4751837-4751856 | None:intergenic | 60.0% | |
| CCCGAGTCAAACCCCGATTC+AGG | + | chr7.4:4752771-4752790 | MS.gene050792:CDS | 60.0% | |
| CCCGTTTCCATCTCCGCCTA+CGG | + | chr7.4:4750040-4750059 | MS.gene050792:CDS | 60.0% | |
| CCGTAGGCGGAGATGGAAAC+GGG | - | chr7.4:4750043-4750062 | None:intergenic | 60.0% | |
| GCCATGAATCCACCCCCAGT+TGG | + | chr7.4:4751540-4751559 | MS.gene050792:CDS | 60.0% | |
| GCTCAGACACAGCAACAGGG+GGG | + | chr7.4:4751399-4751418 | MS.gene050792:CDS | 60.0% | |
| GGAGGACCTCCACTAACCAG+TGG | + | chr7.4:4751303-4751322 | MS.gene050792:CDS | 60.0% | |
| TGGAGCGACAACTAACGCGG+AGG | + | chr7.4:4749889-4749908 | MS.gene050792:CDS | 60.0% | |
| ! | CAGCACGCGCTTTCTAGCAC+CGG | + | chr7.4:4750091-4750110 | MS.gene050792:CDS | 60.0% |
| ! | CGACATGCTGTTCTGGGCAG+TGG | + | chr7.4:4751107-4751126 | MS.gene050792:CDS | 60.0% |
| !! | ACGAGTGGTGTCACCGTAGG+CGG | - | chr7.4:4750056-4750075 | None:intergenic | 60.0% |
| !! | CAACTACACCGGTGCCACCT+AGG | + | chr7.4:4751826-4751845 | MS.gene050792:CDS | 60.0% |
| ACCCCCGCACTGTTCCGCAA+CGG | + | chr7.4:4751940-4751959 | MS.gene050792:CDS | 65.0% | |
| AGCGCGTGCTGTACAGACGC+AGG | - | chr7.4:4750082-4750101 | None:intergenic | 65.0% | |
| CGCACTGTTCCGCAACGGAG+TGG | + | chr7.4:4751945-4751964 | MS.gene050792:CDS | 65.0% | |
| CTCCGTTGCGGAACAGTGCG+GGG | - | chr7.4:4751945-4751964 | None:intergenic | 65.0% | |
| TCCGTTGCGGAACAGTGCGG+GGG | - | chr7.4:4751944-4751963 | None:intergenic | 65.0% | |
| ! | CGCGGAGGCGCAGTATACGA+CGG | + | chr7.4:4749904-4749923 | MS.gene050792:CDS | 65.0% |
| ! | GGTGTCACCGTAGGCGGAGA+TGG | - | chr7.4:4750050-4750069 | None:intergenic | 65.0% |
| !! | CCGGTGCCACCTAGGACTGT+TGG | + | chr7.4:4751834-4751853 | MS.gene050792:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 4749878 | 4752812 | 4749878 | ID=MS.gene050792 |
| chr7.4 | mRNA | 4749878 | 4752812 | 4749878 | ID=MS.gene050792.t1;Parent=MS.gene050792 |
| chr7.4 | exon | 4749878 | 4750139 | 4749878 | ID=MS.gene050792.t1.exon1;Parent=MS.gene050792.t1 |
| chr7.4 | CDS | 4749878 | 4750139 | 4749878 | ID=cds.MS.gene050792.t1;Parent=MS.gene050792.t1 |
| chr7.4 | exon | 4751073 | 4752519 | 4751073 | ID=MS.gene050792.t1.exon2;Parent=MS.gene050792.t1 |
| chr7.4 | CDS | 4751073 | 4752519 | 4751073 | ID=cds.MS.gene050792.t1;Parent=MS.gene050792.t1 |
| chr7.4 | exon | 4752626 | 4752812 | 4752626 | ID=MS.gene050792.t1.exon3;Parent=MS.gene050792.t1 |
| chr7.4 | CDS | 4752626 | 4752812 | 4752626 | ID=cds.MS.gene050792.t1;Parent=MS.gene050792.t1 |
| Gene Sequence |
| Protein sequence |
