Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22783.t1 | XP_003626148.1 | 99.4 | 638 | 4 | 0 | 1 | 638 | 1 | 638 | 0.00E+00 | 1194.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22783.t1 | Q8BJ34 | 28.4 | 155 | 108 | 2 | 15 | 168 | 348 | 500 | 4.3e-09 | 64.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22783.t1 | G7KWF4 | 99.4 | 638 | 4 | 0 | 1 | 638 | 1 | 638 | 0.0e+00 | 1194.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049876 | MS.gene22783 | -0.82614 | 3.19E-54 | -1.69E-46 |
| MS.gene050792 | MS.gene22783 | 0.816768 | 4.66E-52 | -1.69E-46 |
| MS.gene056687 | MS.gene22783 | 0.815291 | 9.97E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22783.t1 | MTR_7g111570 | 99.373 | 638 | 4 | 0 | 1 | 638 | 1 | 638 | 0.0 | 1305 |
| MS.gene22783.t1 | MTR_7g110390 | 75.776 | 161 | 38 | 1 | 12 | 171 | 6 | 166 | 5.88e-78 | 256 |
| MS.gene22783.t1 | MTR_7g110390 | 50.000 | 172 | 86 | 0 | 461 | 632 | 292 | 463 | 8.49e-47 | 172 |
| MS.gene22783.t1 | MTR_3g050240 | 48.101 | 158 | 78 | 3 | 19 | 175 | 174 | 328 | 1.35e-38 | 149 |
| MS.gene22783.t1 | MTR_3g050240 | 44.667 | 150 | 79 | 2 | 17 | 164 | 8 | 155 | 2.18e-25 | 110 |
| MS.gene22783.t1 | MTR_3g095410 | 46.980 | 149 | 79 | 0 | 17 | 165 | 55 | 203 | 4.21e-38 | 152 |
| MS.gene22783.t1 | MTR_7g108660 | 41.860 | 172 | 78 | 2 | 461 | 631 | 100 | 250 | 1.74e-31 | 123 |
| MS.gene22783.t1 | MTR_1g023460 | 43.195 | 169 | 86 | 4 | 11 | 170 | 2 | 169 | 3.99e-31 | 120 |
| MS.gene22783.t1 | MTR_4g085820 | 48.246 | 114 | 57 | 2 | 19 | 130 | 48 | 161 | 1.05e-22 | 102 |
| MS.gene22783.t1 | MTR_8g011120 | 37.037 | 162 | 82 | 5 | 18 | 165 | 33 | 188 | 1.20e-20 | 96.7 |
| MS.gene22783.t1 | MTR_8g011570 | 35.443 | 158 | 82 | 4 | 22 | 165 | 35 | 186 | 1.55e-18 | 90.1 |
| MS.gene22783.t1 | MTR_7g077430 | 35.570 | 149 | 88 | 4 | 17 | 165 | 470 | 610 | 3.14e-18 | 89.7 |
| MS.gene22783.t1 | MTR_7g077430 | 38.136 | 118 | 66 | 3 | 54 | 165 | 2 | 118 | 9.96e-12 | 68.6 |
| MS.gene22783.t1 | MTR_4g098990 | 35.404 | 161 | 85 | 4 | 19 | 165 | 40 | 195 | 6.21e-18 | 87.8 |
| MS.gene22783.t1 | MTR_3g095410 | 54.688 | 64 | 29 | 0 | 102 | 165 | 1 | 64 | 4.79e-14 | 76.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22783.t1 | AT5G61190 | 58.462 | 260 | 81 | 5 | 8 | 265 | 2 | 236 | 1.85e-87 | 288 |
| MS.gene22783.t1 | AT5G61190 | 58.462 | 260 | 81 | 5 | 8 | 265 | 2 | 236 | 1.85e-87 | 288 |
| MS.gene22783.t1 | AT3G62200 | 79.762 | 168 | 34 | 0 | 10 | 177 | 21 | 188 | 3.03e-87 | 286 |
| MS.gene22783.t1 | AT5G61190 | 58.462 | 260 | 81 | 5 | 8 | 265 | 2 | 236 | 1.12e-86 | 289 |
| MS.gene22783.t1 | AT5G61190 | 58.462 | 260 | 81 | 5 | 8 | 265 | 2 | 236 | 5.06e-86 | 289 |
| MS.gene22783.t1 | AT5G61190 | 69.307 | 202 | 60 | 2 | 8 | 207 | 2 | 203 | 5.66e-86 | 290 |
| MS.gene22783.t1 | AT5G61190 | 69.307 | 202 | 60 | 2 | 8 | 207 | 2 | 203 | 8.40e-86 | 289 |
| MS.gene22783.t1 | AT5G61190 | 58.462 | 260 | 81 | 5 | 8 | 265 | 2 | 236 | 1.61e-85 | 289 |
| MS.gene22783.t1 | AT5G61190 | 58.462 | 260 | 81 | 5 | 8 | 265 | 2 | 236 | 1.63e-85 | 289 |
| MS.gene22783.t1 | AT5G61190 | 69.307 | 202 | 60 | 2 | 8 | 207 | 2 | 203 | 1.77e-85 | 289 |
| MS.gene22783.t1 | AT3G62210 | 73.333 | 180 | 45 | 1 | 5 | 181 | 10 | 189 | 1.82e-85 | 269 |
| MS.gene22783.t1 | AT5G61180 | 60.674 | 178 | 52 | 1 | 9 | 168 | 72 | 249 | 1.22e-69 | 231 |
| MS.gene22783.t1 | AT3G61028 | 45.181 | 166 | 88 | 3 | 15 | 177 | 78 | 243 | 1.93e-43 | 157 |
| MS.gene22783.t1 | AT3G61028 | 45.181 | 166 | 88 | 3 | 15 | 177 | 78 | 243 | 1.93e-43 | 157 |
| MS.gene22783.t1 | AT3G60940 | 47.429 | 175 | 83 | 3 | 12 | 177 | 76 | 250 | 3.82e-43 | 156 |
| MS.gene22783.t1 | AT3G60940 | 47.429 | 175 | 83 | 3 | 12 | 177 | 76 | 250 | 3.82e-43 | 156 |
| MS.gene22783.t1 | AT5G64710 | 42.138 | 159 | 91 | 1 | 11 | 168 | 54 | 212 | 1.17e-37 | 150 |
| MS.gene22783.t1 | AT5G09840 | 41.935 | 155 | 90 | 0 | 11 | 165 | 65 | 219 | 2.82e-37 | 149 |
| MS.gene22783.t1 | AT5G61190 | 66.055 | 109 | 35 | 2 | 101 | 207 | 1 | 109 | 2.18e-35 | 143 |
| MS.gene22783.t1 | AT5G61190 | 66.055 | 109 | 35 | 2 | 101 | 207 | 1 | 109 | 2.18e-35 | 143 |
| MS.gene22783.t1 | AT2G15560 | 41.290 | 155 | 87 | 3 | 15 | 165 | 46 | 200 | 4.52e-27 | 115 |
| MS.gene22783.t1 | AT2G15560 | 41.290 | 155 | 87 | 3 | 15 | 165 | 46 | 200 | 4.93e-27 | 115 |
| MS.gene22783.t1 | AT3G62850 | 30.841 | 214 | 131 | 6 | 9 | 211 | 230 | 437 | 6.83e-22 | 99.8 |
| MS.gene22783.t1 | AT3G62850 | 31.210 | 157 | 102 | 2 | 10 | 163 | 7 | 160 | 3.55e-18 | 88.2 |
| MS.gene22783.t1 | AT3G61028 | 40.517 | 116 | 67 | 2 | 15 | 128 | 78 | 193 | 1.07e-21 | 95.5 |
| MS.gene22783.t1 | AT3G62050 | 36.434 | 129 | 73 | 3 | 14 | 139 | 9 | 131 | 4.27e-20 | 88.2 |
| MS.gene22783.t1 | AT5G35640 | 31.111 | 135 | 88 | 2 | 17 | 147 | 32 | 165 | 7.26e-15 | 73.9 |
| MS.gene22783.t1 | AT3G61090 | 29.480 | 173 | 106 | 5 | 18 | 180 | 12 | 178 | 2.13e-14 | 72.4 |
| MS.gene22783.t1 | AT5G64710 | 41.463 | 82 | 47 | 1 | 88 | 168 | 6 | 87 | 3.63e-14 | 76.3 |
| MS.gene22783.t1 | AT3G62460 | 29.927 | 137 | 88 | 3 | 18 | 149 | 58 | 191 | 6.51e-12 | 65.5 |
| MS.gene22783.t1 | AT1G01355 | 32.450 | 151 | 96 | 3 | 28 | 174 | 11 | 159 | 1.38e-11 | 65.1 |
| MS.gene22783.t1 | AT3G56730 | 33.019 | 106 | 65 | 1 | 15 | 120 | 7 | 106 | 2.52e-11 | 63.2 |
| MS.gene22783.t1 | AT3G61100 | 28.485 | 165 | 98 | 5 | 18 | 170 | 8 | 164 | 2.93e-11 | 62.8 |
| MS.gene22783.t1 | AT3G56730 | 30.357 | 112 | 72 | 1 | 9 | 120 | 9 | 114 | 3.82e-11 | 62.8 |
| MS.gene22783.t1 | AT3G56730 | 30.357 | 112 | 72 | 1 | 9 | 120 | 9 | 114 | 3.82e-11 | 62.8 |
| MS.gene22783.t1 | AT1G01355 | 31.788 | 151 | 93 | 3 | 28 | 174 | 11 | 155 | 4.29e-11 | 63.5 |
| MS.gene22783.t1 | AT3G56730 | 32.692 | 104 | 64 | 1 | 17 | 120 | 11 | 108 | 8.31e-11 | 61.6 |
| MS.gene22783.t1 | AT5G64450 | 35.000 | 120 | 64 | 6 | 52 | 162 | 34 | 148 | 9.06e-11 | 61.6 |
Find 191 sgRNAs with CRISPR-Local
Find 246 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCGAATTATTTATTGATTT+CGG | 0.150955 | 7.4:+4846534 | MS.gene22783:CDS |
| GCGAATTATTTATTGATTTC+GGG | 0.173410 | 7.4:+4846535 | MS.gene22783:CDS |
| GGAAAACCGTTTGGTCTTAA+TGG | 0.186135 | 7.4:-4847159 | None:intergenic |
| AACAGCACTCCAAAGAAATT+TGG | 0.210078 | 7.4:+4847844 | MS.gene22783:CDS |
| TCCTTGTCGACATGCTGTTC+TGG | 0.215607 | 7.4:+4846491 | MS.gene22783:CDS |
| CCAATATCTGGCACAGTTCT+AGG | 0.226868 | 7.4:-4847291 | None:intergenic |
| GTTGCAAAAGTATGGGAATT+TGG | 0.231833 | 7.4:-4847219 | None:intergenic |
| GGGATTTGATTCTAGATATC+AGG | 0.233096 | 7.4:+4846864 | MS.gene22783:CDS |
| AATTTCGTCCCAAATTTCTT+TGG | 0.251306 | 7.4:-4847853 | None:intergenic |
| GGTCTTAATGGCTGGGAATA+TGG | 0.268984 | 7.4:-4847147 | None:intergenic |
| ATTTCTTTGGAGTGCTGTTT+AGG | 0.279080 | 7.4:-4847840 | None:intergenic |
| GAATATGTACAAGGCCTTAT+AGG | 0.288105 | 7.4:+4847582 | MS.gene22783:CDS |
| TGTACATATTCAGAAGGTTT+AGG | 0.309220 | 7.4:-4847570 | None:intergenic |
| CCTAGAACTGTGCCAGATAT+TGG | 0.310900 | 7.4:+4847291 | MS.gene22783:CDS |
| TGCTGGTAGATCGGCAATAA+TGG | 0.316014 | 7.4:+4847896 | MS.gene22783:CDS |
| ACCTCCTCATTCGCAGTTGA+TGG | 0.324550 | 7.4:-4846582 | None:intergenic |
| CCGGTGTAGTTGCAAAAGTA+TGG | 0.328541 | 7.4:-4847227 | None:intergenic |
| AATGGTAAGTGGGGATCTTC+AGG | 0.332723 | 7.4:+4847543 | MS.gene22783:CDS |
| CCAGCATGAATTTCAGAATA+GGG | 0.333740 | 7.4:-4846814 | None:intergenic |
| CCTGAGTCAAACCCCGATTC+AGG | 0.342982 | 7.4:+4848183 | MS.gene22783:CDS |
| GCATGTGGATCGGAGCCTTT+AGG | 0.345450 | 7.4:-4845404 | None:intergenic |
| AATAATAAACTTCCCTCTAA+TGG | 0.351040 | 7.4:+4847525 | MS.gene22783:CDS |
| AGATCAACGAATGAACAAAA+TGG | 0.352005 | 7.4:+4847423 | MS.gene22783:CDS |
| ATGTTCAGATTGCCAATATC+TGG | 0.357086 | 7.4:-4847303 | None:intergenic |
| AACATCGGTGTTGCGATGCT+TGG | 0.359132 | 7.4:-4847694 | None:intergenic |
| CGGTTATCTTGAAGTCCAAC+TGG | 0.361639 | 7.4:-4846946 | None:intergenic |
| GATAATTGTTTACATTATTA+CGG | 0.362001 | 7.4:-4846966 | None:intergenic |
| GATCCATTATGGAGCAATAA+TGG | 0.362238 | 7.4:+4847057 | MS.gene22783:CDS |
| GATCCACTTTGAGGAACATT+TGG | 0.363780 | 7.4:-4847006 | None:intergenic |
| TTACCATTATTGCTCCATAA+TGG | 0.363932 | 7.4:-4847060 | None:intergenic |
| TGTTCATTCGTTGATCTTAC+CGG | 0.368690 | 7.4:-4847417 | None:intergenic |
| AACCGTTTGGTCTTAATGGC+TGG | 0.379988 | 7.4:-4847155 | None:intergenic |
| AGGAAATCATCAAAATCAAC+AGG | 0.380452 | 7.4:+4847089 | MS.gene22783:CDS |
| ATTGGCAATCTGAACATATC+TGG | 0.381321 | 7.4:+4847309 | MS.gene22783:CDS |
| TGCTGCTCAGACACAGCAAC+AGG | 0.385298 | 7.4:+4846786 | MS.gene22783:CDS |
| AGATCCCCACTTACCATTAG+AGG | 0.389364 | 7.4:-4847538 | None:intergenic |
| AACATGATTAAGTGAAATTC+CGG | 0.391711 | 7.4:-4845546 | None:intergenic |
| GGGAAATCATCAAAATCAAC+AGG | 0.391798 | 7.4:+4847110 | MS.gene22783:CDS |
| TTCATGGCTTTCGGTCCATT+TGG | 0.392243 | 7.4:-4846916 | None:intergenic |
| GGAAGTGGAGCACTACTCTT+AGG | 0.394120 | 7.4:-4847396 | None:intergenic |
| AATAAATAATTCGCAGGTGC+AGG | 0.398280 | 7.4:-4846526 | None:intergenic |
| TTCGTTGATCTTACCGGAAG+TGG | 0.402973 | 7.4:-4847411 | None:intergenic |
| TTCGGTCCATTTGGTTGACT+CGG | 0.404852 | 7.4:-4846907 | None:intergenic |
| CAGCTAAGAGTGTATGGCTT+TGG | 0.407793 | 7.4:+4846656 | MS.gene22783:CDS |
| TAAGAGTAGTGCTCCACTTC+CGG | 0.410866 | 7.4:+4847398 | MS.gene22783:CDS |
| CAAGTAAAACAACACCTATA+AGG | 0.412949 | 7.4:-4847596 | None:intergenic |
| TCAGAAGTCACCCCTGAATC+GGG | 0.413185 | 7.4:-4848195 | None:intergenic |
| ACTCCGTTGCGGAACAGTGC+GGG | 0.413493 | 7.4:-4847355 | None:intergenic |
| GAGTGTGTAGGTTGATATTC+TGG | 0.418613 | 7.4:-4847489 | None:intergenic |
| CCTTGTCGACATGCTGTTCT+GGG | 0.419680 | 7.4:+4846492 | MS.gene22783:CDS |
| ACAGCACTCCAAAGAAATTT+GGG | 0.420086 | 7.4:+4847845 | MS.gene22783:CDS |
| CTTCTCAGTTGGCATCATCT+TGG | 0.424167 | 7.4:-4847640 | None:intergenic |
| GCGCCAATTCTGATCCATTA+TGG | 0.426102 | 7.4:+4847046 | MS.gene22783:CDS |
| GCTCCATAATGGATCAGAAT+TGG | 0.428216 | 7.4:-4847049 | None:intergenic |
| ATATCTGGTTATCCCAATAA+TGG | 0.432994 | 7.4:+4847324 | MS.gene22783:CDS |
| GTATACGACGGCGAAGATAT+CGG | 0.442192 | 7.4:+4845352 | MS.gene22783:CDS |
| ACATCGGTGTTGCGATGCTT+GGG | 0.448328 | 7.4:-4847693 | None:intergenic |
| GTCAGAAGTCACCCCTGAAT+CGG | 0.449046 | 7.4:-4848196 | None:intergenic |
| GAATGAACAAAATGGACATA+TGG | 0.450541 | 7.4:+4847431 | MS.gene22783:CDS |
| TCCAGCATGAATTTCAGAAT+AGG | 0.452577 | 7.4:-4846815 | None:intergenic |
| TATGAATTACTAGGTGCAAA+AGG | 0.459744 | 7.4:-4847192 | None:intergenic |
| ACCGTTTGGTCTTAATGGCT+GGG | 0.462546 | 7.4:-4847154 | None:intergenic |
| CTTTGGACTACTCTCTTAGC+TGG | 0.463279 | 7.4:+4846673 | MS.gene22783:CDS |
| TGTGTATCACCACTGGTTAG+TGG | 0.463529 | 7.4:-4846703 | None:intergenic |
| TGGATAATTCATCAGCAGTC+TGG | 0.469032 | 7.4:+4848135 | MS.gene22783:CDS |
| ATGGTGGTAAAACAAAATTT+AGG | 0.469766 | 7.4:+4847750 | MS.gene22783:CDS |
| CCCTCCATCAACTGCGAATG+AGG | 0.471098 | 7.4:+4846578 | MS.gene22783:CDS |
| GGAGCACTACTCTTAGGATT+CGG | 0.471163 | 7.4:-4847390 | None:intergenic |
| CGACATGCTGTTCTGGGCAG+TGG | 0.473730 | 7.4:+4846498 | MS.gene22783:CDS |
| ATAACTGATAGCATCCGTTA+TGG | 0.474762 | 7.4:+4847666 | MS.gene22783:CDS |
| ATTGGCGCGCTCAAAGTTTG+TGG | 0.477749 | 7.4:-4847031 | None:intergenic |
| TTGCAGCAGCTAAGAGTGTA+TGG | 0.479275 | 7.4:+4846650 | MS.gene22783:CDS |
| ACATTTGGATTATAGTTGCC+AGG | 0.480104 | 7.4:-4846991 | None:intergenic |
| GGTTGCAATGGAAAACCGTT+TGG | 0.481798 | 7.4:-4847168 | None:intergenic |
| GGTGTCACCGTAGGCGGAGA+TGG | 0.483267 | 7.4:-4845483 | None:intergenic |
| TAAGATCAGATGGGCGGAGG+TGG | 0.484744 | 7.4:+4845305 | None:intergenic |
| TCAGTTATATTCTTCTCAGT+TGG | 0.486950 | 7.4:-4847651 | None:intergenic |
| AACTTCCCTCTAATGGTAAG+TGG | 0.488285 | 7.4:+4847532 | MS.gene22783:CDS |
| CCGTAGGCGGAGATGGAAAC+GGG | 0.489402 | 7.4:-4845476 | None:intergenic |
| CCCGTTTCCATCTCCGCCTA+CGG | 0.493859 | 7.4:+4845476 | MS.gene22783:CDS |
| GAAAACTGTCATGTTCCTAA+AGG | 0.494196 | 7.4:+4845389 | MS.gene22783:CDS |
| TGGAAGTGTGTAAATCCCTT+AGG | 0.494619 | 7.4:+4847810 | MS.gene22783:CDS |
| CAAATGTTCAAAACGGAGGA+AGG | 0.495613 | 7.4:+4846842 | MS.gene22783:CDS |
| CTGTTTAGGATTTCCACCTA+AGG | 0.496032 | 7.4:-4847826 | None:intergenic |
| CCTACACACTCGACAGCAAT+GGG | 0.496891 | 7.4:+4847501 | MS.gene22783:CDS |
| TTGGTAAGAATGACAAACTC+TGG | 0.500710 | 7.4:+4847790 | MS.gene22783:CDS |
| AAATTGTTGCCAACAGTCCT+AGG | 0.502255 | 7.4:-4847255 | None:intergenic |
| CCCTATTCTGAAATTCATGC+TGG | 0.505000 | 7.4:+4846814 | MS.gene22783:CDS |
| TTTGGAGAATATGAATTACT+AGG | 0.506209 | 7.4:-4847201 | None:intergenic |
| AACAACCCCTGCTGGTAGAT+CGG | 0.506607 | 7.4:+4847887 | MS.gene22783:CDS |
| CTGAGTCAAACCCCGATTCA+GGG | 0.507183 | 7.4:+4848184 | MS.gene22783:CDS |
| CTCCGTTGCGGAACAGTGCG+GGG | 0.510872 | 7.4:-4847354 | None:intergenic |
| TCGGTCCATTTGGTTGACTC+GGG | 0.511015 | 7.4:-4846906 | None:intergenic |
| ACCGTAGGCGGAGATGGAAA+CGG | 0.511972 | 7.4:-4845477 | None:intergenic |
| AATCCAAATGTTCCTCAAAG+TGG | 0.513048 | 7.4:+4847003 | MS.gene22783:CDS |
| CCTGAATCGGGGTTTGACTC+AGG | 0.515729 | 7.4:-4848183 | None:intergenic |
| AATGTTCAAAACGGAGGAAG+GGG | 0.517066 | 7.4:+4846844 | MS.gene22783:CDS |
| TAATTCATCAGCAGTCTGGC+TGG | 0.517933 | 7.4:+4848139 | MS.gene22783:CDS |
| TGACTCGGGTTTCTCCAAGT+TGG | 0.524058 | 7.4:-4846892 | None:intergenic |
| TATTTCTGTAGGTATGAAGC+AGG | 0.525565 | 7.4:+4848027 | MS.gene22783:intron |
| GTTGGCAACAATTTCAGTAC+AGG | 0.526636 | 7.4:+4847264 | MS.gene22783:CDS |
| TCCCAGCCATTAAGACCAAA+CGG | 0.527762 | 7.4:+4847153 | MS.gene22783:CDS |
| TTTGTGGTTGATCCACTTTG+AGG | 0.528704 | 7.4:-4847015 | None:intergenic |
| CAACTACACCGGTGCCACCT+AGG | 0.529046 | 7.4:+4847238 | MS.gene22783:CDS |
| GATATCAGGGTAGACCAACT+TGG | 0.529804 | 7.4:+4846878 | MS.gene22783:CDS |
| ATTATTGCCGATCTACCAGC+AGG | 0.530418 | 7.4:-4847894 | None:intergenic |
| CACCGATGTTAAGAAAGCTC+TGG | 0.531404 | 7.4:+4847707 | MS.gene22783:CDS |
| ACTTCCCTCTAATGGTAAGT+GGG | 0.534715 | 7.4:+4847533 | MS.gene22783:CDS |
| GGAAATTCAAATGTTCAAAA+CGG | 0.536448 | 7.4:+4846835 | MS.gene22783:CDS |
| GAAAGCTCTGGAGAGTGCTA+TGG | 0.538754 | 7.4:+4847719 | MS.gene22783:CDS |
| CCAACAGTCCTAGGTGGCAC+CGG | 0.539658 | 7.4:-4847246 | None:intergenic |
| ACCTACACACTCGACAGCAA+TGG | 0.545629 | 7.4:+4847500 | MS.gene22783:CDS |
| TTCAAATCTCCACTCCGTTG+CGG | 0.550016 | 7.4:-4847366 | None:intergenic |
| GTCTGAGCAGCATTTGAGAC+AGG | 0.550440 | 7.4:-4846775 | None:intergenic |
| GGTTATCTTGAAGTCCAACT+GGG | 0.555376 | 7.4:-4846945 | None:intergenic |
| CGGTGTAGTTGCAAAAGTAT+GGG | 0.556383 | 7.4:-4847226 | None:intergenic |
| CTGCGCAATTGCATGTGGAT+CGG | 0.560127 | 7.4:-4845414 | None:intergenic |
| TGTTTAGGATTTCCACCTAA+GGG | 0.560176 | 7.4:-4847825 | None:intergenic |
| CCGGTGCCACCTAGGACTGT+TGG | 0.561100 | 7.4:+4847246 | MS.gene22783:CDS |
| GGATTTGATTCTAGATATCA+GGG | 0.561545 | 7.4:+4846865 | MS.gene22783:CDS |
| CTCTTAGCTGCTGCAACTAG+TGG | 0.562484 | 7.4:-4846643 | None:intergenic |
| TGGACTACTCTCTTAGCTGG+AGG | 0.562680 | 7.4:+4846676 | MS.gene22783:CDS |
| AGGCCTTGTACATATTCAGA+AGG | 0.565970 | 7.4:-4847576 | None:intergenic |
| AAATGTTCAAAACGGAGGAA+GGG | 0.566489 | 7.4:+4846843 | MS.gene22783:CDS |
| GGCGAAGATATCGGTATGGT+GGG | 0.567110 | 7.4:+4845361 | MS.gene22783:CDS |
| GGTGCTTTAACGCTGTATGT+TGG | 0.568779 | 7.4:+4847771 | MS.gene22783:CDS |
| ATAAATAATTCGCAGGTGCA+GGG | 0.569096 | 7.4:-4846525 | None:intergenic |
| AGAAACCCGAGTCAACCAAA+TGG | 0.569109 | 7.4:+4846901 | MS.gene22783:CDS |
| CGGCGAAGATATCGGTATGG+TGG | 0.569397 | 7.4:+4845360 | MS.gene22783:CDS |
| GAAATCAATAAATAATTCGC+AGG | 0.575414 | 7.4:-4846532 | None:intergenic |
| CTTCCCTCTAATGGTAAGTG+GGG | 0.577253 | 7.4:+4847534 | MS.gene22783:CDS |
| TCCTCATTCGCAGTTGATGG+AGG | 0.578055 | 7.4:-4846579 | None:intergenic |
| GGTGCAAAAGGAGGTTGCAA+TGG | 0.586116 | 7.4:-4847180 | None:intergenic |
| CGCACTGTTCCGCAACGGAG+TGG | 0.587754 | 7.4:+4847357 | MS.gene22783:CDS |
| CTCCAGAGCTTTCTTAACAT+CGG | 0.590270 | 7.4:-4847709 | None:intergenic |
| GATGCTTGGGATCTCCATAA+CGG | 0.593120 | 7.4:-4847680 | None:intergenic |
| ACGAGTGGTGTCACCGTAGG+CGG | 0.595030 | 7.4:-4845489 | None:intergenic |
| TGCTCAGACACAGCAACAGG+GGG | 0.595588 | 7.4:+4846789 | MS.gene22783:CDS |
| CAGCACGCGCTTTCTAGCAC+CGG | 0.596449 | 7.4:+4845527 | MS.gene22783:CDS |
| GAGTTGTTGTGTATCACCAC+TGG | 0.599166 | 7.4:-4846710 | None:intergenic |
| AGATAAGATCAGATGGGCGG+AGG | 0.599612 | 7.4:+4845302 | None:intergenic |
| CCTCATTCGCAGTTGATGGA+GGG | 0.600072 | 7.4:-4846578 | None:intergenic |
| ACTTGTATAGTTTCAGAAGA+CGG | 0.600079 | 7.4:-4846751 | None:intergenic |
| AAACCTTCTGAATATGTACA+AGG | 0.601145 | 7.4:+4847573 | MS.gene22783:CDS |
| CCCAGAACAGCATGTCGACA+AGG | 0.601862 | 7.4:-4846492 | None:intergenic |
| TCACTTAATCATGTTCCCGC+CGG | 0.605523 | 7.4:+4845554 | MS.gene22783:CDS |
| GGTTTGACTCAGGAAGAGTA+AGG | 0.605762 | 7.4:-4848173 | None:intergenic |
| GATCCCCACTTACCATTAGA+GGG | 0.607911 | 7.4:-4847537 | None:intergenic |
| CACTCCGTTGCGGAACAGTG+CGG | 0.607972 | 7.4:-4847356 | None:intergenic |
| AAGTGTGTAAATCCCTTAGG+TGG | 0.612305 | 7.4:+4847813 | MS.gene22783:CDS |
| TGCTATGGAGCAGCAGATGG+TGG | 0.612792 | 7.4:+4847734 | MS.gene22783:CDS |
| TCACCATGTTCAATATCTGA+AGG | 0.616291 | 7.4:-4848098 | None:intergenic |
| CTTGTTCGTATGAACTATTG+TGG | 0.616869 | 7.4:+4845452 | MS.gene22783:CDS |
| TCCGTTGCGGAACAGTGCGG+GGG | 0.622717 | 7.4:-4847353 | None:intergenic |
| CCCATTGCTGTCGAGTGTGT+AGG | 0.626853 | 7.4:-4847501 | None:intergenic |
| TCAGGAAGAGTAAGGATGAG+TGG | 0.633719 | 7.4:-4848165 | None:intergenic |
| CGACGGCGAAGATATCGGTA+TGG | 0.634124 | 7.4:+4845357 | MS.gene22783:CDS |
| AGCAATAATGGTAATCAACA+AGG | 0.635068 | 7.4:+4847069 | MS.gene22783:CDS |
| CTGCTCAGACACAGCAACAG+GGG | 0.637667 | 7.4:+4846788 | MS.gene22783:CDS |
| TATTGCCGATCTACCAGCAG+GGG | 0.638854 | 7.4:-4847892 | None:intergenic |
| ATATTCTGCGCAATTGCATG+TGG | 0.639515 | 7.4:-4845419 | None:intergenic |
| TGAGTCAAACCCCGATTCAG+GGG | 0.644565 | 7.4:+4848185 | MS.gene22783:CDS |
| GAGTGCTATGGAGCAGCAGA+TGG | 0.644619 | 7.4:+4847731 | MS.gene22783:CDS |
| AATTCAAATGTTCAAAACGG+AGG | 0.648741 | 7.4:+4846838 | MS.gene22783:CDS |
| GCTGCTCAGACACAGCAACA+GGG | 0.650440 | 7.4:+4846787 | MS.gene22783:CDS |
| AATGTAAACAATTATCGACC+TGG | 0.651786 | 7.4:+4846973 | MS.gene22783:CDS |
| TCCATCAACTGCGAATGAGG+AGG | 0.652227 | 7.4:+4846581 | MS.gene22783:CDS |
| ACCACTCAAGGCTATCCACA+TGG | 0.657824 | 7.4:+4847465 | MS.gene22783:CDS |
| AGCGCGTGCTGTACAGACGC+AGG | 0.658760 | 7.4:-4845515 | None:intergenic |
| GTGCATAGCAGTACCACTCA+AGG | 0.659605 | 7.4:+4847453 | MS.gene22783:CDS |
| GTATCACCACTGGTTAGTGG+AGG | 0.662670 | 7.4:-4846700 | None:intergenic |
| CAGAAGTCACCCCTGAATCG+GGG | 0.665735 | 7.4:-4848194 | None:intergenic |
| CGCGGAGGCGCAGTATACGA+CGG | 0.668480 | 7.4:+4845340 | MS.gene22783:CDS |
| TATACGAGTGGTGTCACCGT+AGG | 0.671792 | 7.4:-4845492 | None:intergenic |
| CGGAGATAAGATCAGATGGG+CGG | 0.673527 | 7.4:+4845299 | None:intergenic |
| TGTCCTTCAGATATTGAACA+TGG | 0.677199 | 7.4:+4848095 | MS.gene22783:CDS |
| TTATTGCCGATCTACCAGCA+GGG | 0.679539 | 7.4:-4847893 | None:intergenic |
| GAAATCATCAAAATCAACAG+GGG | 0.679631 | 7.4:+4847112 | MS.gene22783:CDS |
| GTTATCTTGAAGTCCAACTG+GGG | 0.686988 | 7.4:-4846944 | None:intergenic |
| AGGTGGAGCGACAACTAACG+CGG | 0.688181 | 7.4:+4845322 | MS.gene22783:CDS |
| GGAGGACCTCCACTAACCAG+TGG | 0.691674 | 7.4:+4846694 | MS.gene22783:CDS |
| GGAAATCATCAAAATCAACA+GGG | 0.697219 | 7.4:+4847111 | MS.gene22783:CDS |
| GGTTGATATTCTGGACCATG+TGG | 0.700176 | 7.4:-4847480 | None:intergenic |
| TTATCTTGAAGTCCAACTGG+GGG | 0.703666 | 7.4:-4846943 | None:intergenic |
| TACAGACGCAGGTATACGAG+TGG | 0.706607 | 7.4:-4845504 | None:intergenic |
| GAATTACTAGGTGCAAAAGG+AGG | 0.707826 | 7.4:-4847189 | None:intergenic |
| TGGAGCGACAACTAACGCGG+AGG | 0.712925 | 7.4:+4845325 | MS.gene22783:CDS |
| TTGTTGCCAACAGTCCTAGG+TGG | 0.727786 | 7.4:-4847252 | None:intergenic |
| GGAAATCATCAAAATCAACA+GGG | 0.731421 | 7.4:+4847090 | MS.gene22783:CDS |
| GCTCAGACACAGCAACAGGG+GGG | 0.746430 | 7.4:+4846790 | MS.gene22783:CDS |
| ACCATGTGGATAGCCTTGAG+TGG | 0.749894 | 7.4:-4847466 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GATAATTGTTTACATTATTA+CGG | - | chr7.4:4846969-4846988 | None:intergenic | 15.0% |
| !!! | ATGAATATAGTCTATTTTAT+TGG | - | chr7.4:4847969-4847988 | None:intergenic | 15.0% |
| !!! | ATGAATTATCCATTTTTTAT+GGG | - | chr7.4:4848127-4848146 | None:intergenic | 15.0% |
| !!! | GATGAATTATCCATTTTTTA+TGG | - | chr7.4:4848128-4848147 | None:intergenic | 20.0% |
| !!! | TGCGAATTATTTATTGATTT+CGG | + | chr7.4:4846534-4846553 | MS.gene22783:CDS | 20.0% |
| !!! | TTGAATTTTTTCTCAGTATA+AGG | + | chr7.4:4845811-4845830 | MS.gene22783:intron | 20.0% |
| ! | AACATGATTAAGTGAAATTC+CGG | - | chr7.4:4845549-4845568 | None:intergenic | 25.0% |
| ! | AATAATAAACTTCCCTCTAA+TGG | + | chr7.4:4847525-4847544 | MS.gene22783:CDS | 25.0% |
| ! | ATGGTGGTAAAACAAAATTT+AGG | + | chr7.4:4847750-4847769 | MS.gene22783:CDS | 25.0% |
| ! | GAAATCAATAAATAATTCGC+AGG | - | chr7.4:4846535-4846554 | None:intergenic | 25.0% |
| ! | GGAAATTCAAATGTTCAAAA+CGG | + | chr7.4:4846835-4846854 | MS.gene22783:CDS | 25.0% |
| ! | TGTTGAACAGTTAATACATT+TGG | + | chr7.4:4846333-4846352 | MS.gene22783:intron | 25.0% |
| ! | TTATCAAAATTACACCTCAA+AGG | - | chr7.4:4846193-4846212 | None:intergenic | 25.0% |
| ! | TTTGGAGAATATGAATTACT+AGG | - | chr7.4:4847204-4847223 | None:intergenic | 25.0% |
| !! | TGTTGATTGAAAGATAGATT+TGG | + | chr7.4:4846270-4846289 | MS.gene22783:intron | 25.0% |
| !! | TTCATTTCTGTGATTGATTT+GGG | + | chr7.4:4845701-4845720 | MS.gene22783:intron | 25.0% |
| !!! | AATTTCACACTATTGATTTG+TGG | - | chr7.4:4846392-4846411 | None:intergenic | 25.0% |
| !!! | ATGGTTTTAAATTGTGATTG+CGG | + | chr7.4:4845850-4845869 | MS.gene22783:intron | 25.0% |
| !!! | CTTTTTTCATGTTTGGTTAT+AGG | + | chr7.4:4846442-4846461 | MS.gene22783:intron | 25.0% |
| !!! | GAGGTGTAATTTTGATAATT+TGG | + | chr7.4:4846195-4846214 | MS.gene22783:intron | 25.0% |
| !!! | GCGAATTATTTATTGATTTC+GGG | + | chr7.4:4846535-4846554 | MS.gene22783:CDS | 25.0% |
| !!! | GTGTGAAATTTTGATACATT+TGG | + | chr7.4:4846402-4846421 | MS.gene22783:intron | 25.0% |
| !!! | TGAATCTATTCTATTTCTGT+AGG | + | chr7.4:4848016-4848035 | MS.gene22783:intron | 25.0% |
| !!! | TGTTTTAAAGATCTTGCTTT+GGG | + | chr7.4:4848069-4848088 | MS.gene22783:CDS | 25.0% |
| AAACCTTCTGAATATGTACA+AGG | + | chr7.4:4847573-4847592 | MS.gene22783:CDS | 30.0% | |
| AATGTAAACAATTATCGACC+TGG | + | chr7.4:4846973-4846992 | MS.gene22783:CDS | 30.0% | |
| AATTCAAATGTTCAAAACGG+AGG | + | chr7.4:4846838-4846857 | MS.gene22783:CDS | 30.0% | |
| AATTTCGTCCCAAATTTCTT+TGG | - | chr7.4:4847856-4847875 | None:intergenic | 30.0% | |
| ACTTGTATAGTTTCAGAAGA+CGG | - | chr7.4:4846754-4846773 | None:intergenic | 30.0% | |
| AGAATAGATTCATCAGAATG+CGG | - | chr7.4:4848008-4848027 | None:intergenic | 30.0% | |
| AGATCAACGAATGAACAAAA+TGG | + | chr7.4:4847423-4847442 | MS.gene22783:CDS | 30.0% | |
| AGCAATAATGGTAATCAACA+AGG | + | chr7.4:4847069-4847088 | MS.gene22783:CDS | 30.0% | |
| AGCTATGATTTATGAACTGT+CGG | + | chr7.4:4845622-4845641 | MS.gene22783:intron | 30.0% | |
| AGGAAATCATCAAAATCAAC+AGG | + | chr7.4:4847089-4847108 | MS.gene22783:CDS | 30.0% | |
| ATATCTGGTTATCCCAATAA+TGG | + | chr7.4:4847324-4847343 | MS.gene22783:CDS | 30.0% | |
| ATCACGTGATAAATAAGTCA+GGG | - | chr7.4:4845975-4845994 | None:intergenic | 30.0% | |
| CAAGTAAAACAACACCTATA+AGG | - | chr7.4:4847599-4847618 | None:intergenic | 30.0% | |
| GAAATCATCAAAATCAACAG+GGG | + | chr7.4:4847091-4847110 | MS.gene22783:CDS | 30.0% | |
| GAATGAACAAAATGGACATA+TGG | + | chr7.4:4847431-4847450 | MS.gene22783:CDS | 30.0% | |
| GGAAATCATCAAAATCAACA+GGG | + | chr7.4:4847090-4847109 | MS.gene22783:CDS | 30.0% | |
| GGATTTGATTCTAGATATCA+GGG | + | chr7.4:4846865-4846884 | MS.gene22783:CDS | 30.0% | |
| GTTCATTTCTGTGATTGATT+TGG | + | chr7.4:4845700-4845719 | MS.gene22783:intron | 30.0% | |
| TATGAATTACTAGGTGCAAA+AGG | - | chr7.4:4847195-4847214 | None:intergenic | 30.0% | |
| TCAGTTATATTCTTCTCAGT+TGG | - | chr7.4:4847654-4847673 | None:intergenic | 30.0% | |
| TGGTGATAACCCATAAAAAA+TGG | + | chr7.4:4848115-4848134 | MS.gene22783:CDS | 30.0% | |
| TGTACATATTCAGAAGGTTT+AGG | - | chr7.4:4847573-4847592 | None:intergenic | 30.0% | |
| TTACCATTATTGCTCCATAA+TGG | - | chr7.4:4847063-4847082 | None:intergenic | 30.0% | |
| TTTCACACAATCAATCAACA+CGG | - | chr7.4:4846228-4846247 | None:intergenic | 30.0% | |
| ! | GGTATTAAGAATCTGATTTG+TGG | + | chr7.4:4846022-4846041 | MS.gene22783:intron | 30.0% |
| !!! | ATTGATTTGGGTATTTTACG+CGG | + | chr7.4:4845713-4845732 | MS.gene22783:intron | 30.0% |
| !!! | GTGTTTTAAAGATCTTGCTT+TGG | + | chr7.4:4848068-4848087 | MS.gene22783:CDS | 30.0% |
| AAATGTTCAAAACGGAGGAA+GGG | + | chr7.4:4846843-4846862 | MS.gene22783:CDS | 35.0% | |
| AACAGCACTCCAAAGAAATT+TGG | + | chr7.4:4847844-4847863 | MS.gene22783:CDS | 35.0% | |
| AATAAATAATTCGCAGGTGC+AGG | - | chr7.4:4846529-4846548 | None:intergenic | 35.0% | |
| AATAGATTCATCAGAATGCG+GGG | - | chr7.4:4848006-4848025 | None:intergenic | 35.0% | |
| AATCCAAATGTTCCTCAAAG+TGG | + | chr7.4:4847003-4847022 | MS.gene22783:CDS | 35.0% | |
| AATCGAAGTAAGTTCGTTAC+CGG | - | chr7.4:4845576-4845595 | None:intergenic | 35.0% | |
| ACAGCACTCCAAAGAAATTT+GGG | + | chr7.4:4847845-4847864 | MS.gene22783:CDS | 35.0% | |
| ACATTTGGATTATAGTTGCC+AGG | - | chr7.4:4846994-4847013 | None:intergenic | 35.0% | |
| ATAAATAATTCGCAGGTGCA+GGG | - | chr7.4:4846528-4846547 | None:intergenic | 35.0% | |
| ATAACTGATAGCATCCGTTA+TGG | + | chr7.4:4847666-4847685 | MS.gene22783:CDS | 35.0% | |
| ATGTTCAGATTGCCAATATC+TGG | - | chr7.4:4847306-4847325 | None:intergenic | 35.0% | |
| ATTGGCAATCTGAACATATC+TGG | + | chr7.4:4847309-4847328 | MS.gene22783:CDS | 35.0% | |
| CACAGTTTGTACTGTCTATA+TGG | + | chr7.4:4846001-4846020 | MS.gene22783:intron | 35.0% | |
| CATCACGTGATAAATAAGTC+AGG | - | chr7.4:4845976-4845995 | None:intergenic | 35.0% | |
| CCAGCATGAATTTCAGAATA+GGG | - | chr7.4:4846817-4846836 | None:intergenic | 35.0% | |
| CTTGTTCGTATGAACTATTG+TGG | + | chr7.4:4845452-4845471 | MS.gene22783:CDS | 35.0% | |
| GAAAACTGTCATGTTCCTAA+AGG | + | chr7.4:4845389-4845408 | MS.gene22783:CDS | 35.0% | |
| GAATAGATTCATCAGAATGC+GGG | - | chr7.4:4848007-4848026 | None:intergenic | 35.0% | |
| GACTTATTTATCACGTGATG+CGG | + | chr7.4:4845976-4845995 | MS.gene22783:intron | 35.0% | |
| GATCCATTATGGAGCAATAA+TGG | + | chr7.4:4847057-4847076 | MS.gene22783:CDS | 35.0% | |
| GGGAAATCATCAAAATCAAC+AGG | + | chr7.4:4847110-4847129 | MS.gene22783:CDS | 35.0% | |
| GGGATTTGATTCTAGATATC+AGG | + | chr7.4:4846864-4846883 | MS.gene22783:CDS | 35.0% | |
| TATTGTGATAGCTGATACTG+TGG | + | chr7.4:4845889-4845908 | MS.gene22783:intron | 35.0% | |
| TCACCATGTTCAATATCTGA+AGG | - | chr7.4:4848101-4848120 | None:intergenic | 35.0% | |
| TCCAGCATGAATTTCAGAAT+AGG | - | chr7.4:4846818-4846837 | None:intergenic | 35.0% | |
| TGGTTCACTTGAAACATTCA+CGG | + | chr7.4:4846290-4846309 | MS.gene22783:intron | 35.0% | |
| TGTCCTTCAGATATTGAACA+TGG | + | chr7.4:4848095-4848114 | MS.gene22783:CDS | 35.0% | |
| TGTTCATTCGTTGATCTTAC+CGG | - | chr7.4:4847420-4847439 | None:intergenic | 35.0% | |
| TTGGTAAGAATGACAAACTC+TGG | + | chr7.4:4847790-4847809 | MS.gene22783:CDS | 35.0% | |
| ! | GAATATGTACAAGGCCTTAT+AGG | + | chr7.4:4847582-4847601 | MS.gene22783:CDS | 35.0% |
| ! | GTTGCAAAAGTATGGGAATT+TGG | - | chr7.4:4847222-4847241 | None:intergenic | 35.0% |
| ! | TATTTCTGTAGGTATGAAGC+AGG | + | chr7.4:4848027-4848046 | MS.gene22783:intron | 35.0% |
| ! | TGTTTAGGATTTCCACCTAA+GGG | - | chr7.4:4847828-4847847 | None:intergenic | 35.0% |
| !! | AAACATTCACGGTTGATTTG+TGG | + | chr7.4:4846301-4846320 | MS.gene22783:intron | 35.0% |
| !! | AGGTGATTTGATTTGAAGCA+TGG | + | chr7.4:4845831-4845850 | MS.gene22783:intron | 35.0% |
| !! | ATTTCTTTGGAGTGCTGTTT+AGG | - | chr7.4:4847843-4847862 | None:intergenic | 35.0% |
| !!! | GCTGAAGCTTTTTTCATGTT+TGG | + | chr7.4:4846435-4846454 | MS.gene22783:intron | 35.0% |
| !!! | GGCATTTTTTAGTGAGTTCA+GGG | - | chr7.4:4847622-4847641 | None:intergenic | 35.0% |
| !!! | TGGCATTTTTTAGTGAGTTC+AGG | - | chr7.4:4847623-4847642 | None:intergenic | 35.0% |
| AAATTGTTGCCAACAGTCCT+AGG | - | chr7.4:4847258-4847277 | None:intergenic | 40.0% | |
| AACTTCCCTCTAATGGTAAG+TGG | + | chr7.4:4847532-4847551 | MS.gene22783:CDS | 40.0% | |
| AAGTGTGTAAATCCCTTAGG+TGG | + | chr7.4:4847813-4847832 | MS.gene22783:CDS | 40.0% | |
| AATGTTCAAAACGGAGGAAG+GGG | + | chr7.4:4846844-4846863 | MS.gene22783:CDS | 40.0% | |
| ACTTCCCTCTAATGGTAAGT+GGG | + | chr7.4:4847533-4847552 | MS.gene22783:CDS | 40.0% | |
| ATATTCTGCGCAATTGCATG+TGG | - | chr7.4:4845422-4845441 | None:intergenic | 40.0% | |
| CAAATGTTCAAAACGGAGGA+AGG | + | chr7.4:4846842-4846861 | MS.gene22783:CDS | 40.0% | |
| CTCCAGAGCTTTCTTAACAT+CGG | - | chr7.4:4847712-4847731 | None:intergenic | 40.0% | |
| GAATTACTAGGTGCAAAAGG+AGG | - | chr7.4:4847192-4847211 | None:intergenic | 40.0% | |
| GGTTATCTTGAAGTCCAACT+GGG | - | chr7.4:4846948-4846967 | None:intergenic | 40.0% | |
| GTTATCTTGAAGTCCAACTG+GGG | - | chr7.4:4846947-4846966 | None:intergenic | 40.0% | |
| GTTGGCAACAATTTCAGTAC+AGG | + | chr7.4:4847264-4847283 | MS.gene22783:CDS | 40.0% | |
| TGGATAATTCATCAGCAGTC+TGG | + | chr7.4:4848135-4848154 | MS.gene22783:CDS | 40.0% | |
| TTATCTTGAAGTCCAACTGG+GGG | - | chr7.4:4846946-4846965 | None:intergenic | 40.0% | |
| TTTGTGGTTGATCCACTTTG+AGG | - | chr7.4:4847018-4847037 | None:intergenic | 40.0% | |
| ! | AATTTTCTAACAACCCCTGC+TGG | + | chr7.4:4847879-4847898 | MS.gene22783:CDS | 40.0% |
| ! | AGAATGCGGGGATATCTTTT+AGG | - | chr7.4:4847994-4848013 | None:intergenic | 40.0% |
| ! | AGGCCTTGTACATATTCAGA+AGG | - | chr7.4:4847579-4847598 | None:intergenic | 40.0% |
| ! | CCATACTTTTGCAACTACAC+CGG | + | chr7.4:4847227-4847246 | MS.gene22783:CDS | 40.0% |
| ! | CGGTGTAGTTGCAAAAGTAT+GGG | - | chr7.4:4847229-4847248 | None:intergenic | 40.0% |
| ! | CTGTTTAGGATTTCCACCTA+AGG | - | chr7.4:4847829-4847848 | None:intergenic | 40.0% |
| ! | GATCCACTTTGAGGAACATT+TGG | - | chr7.4:4847009-4847028 | None:intergenic | 40.0% |
| ! | TGGAAGTGTGTAAATCCCTT+AGG | + | chr7.4:4847810-4847829 | MS.gene22783:CDS | 40.0% |
| !! | CCCTATTCTGAAATTCATGC+TGG | + | chr7.4:4846814-4846833 | MS.gene22783:CDS | 40.0% |
| !! | GAGTGTGTAGGTTGATATTC+TGG | - | chr7.4:4847492-4847511 | None:intergenic | 40.0% |
| !! | GCTCCATAATGGATCAGAAT+TGG | - | chr7.4:4847052-4847071 | None:intergenic | 40.0% |
| !! | GGAAAACCGTTTGGTCTTAA+TGG | - | chr7.4:4847162-4847181 | None:intergenic | 40.0% |
| AATGGTAAGTGGGGATCTTC+AGG | + | chr7.4:4847543-4847562 | MS.gene22783:CDS | 45.0% | |
| ACACCTCAAAGGCTCAAGAA+AGG | - | chr7.4:4846182-4846201 | None:intergenic | 45.0% | |
| AGAAACCCGAGTCAACCAAA+TGG | + | chr7.4:4846901-4846920 | MS.gene22783:CDS | 45.0% | |
| AGATCCCCACTTACCATTAG+AGG | - | chr7.4:4847541-4847560 | None:intergenic | 45.0% | |
| ATTATTGCCGATCTACCAGC+AGG | - | chr7.4:4847897-4847916 | None:intergenic | 45.0% | |
| CACCGATGTTAAGAAAGCTC+TGG | + | chr7.4:4847707-4847726 | MS.gene22783:CDS | 45.0% | |
| CCAATATCTGGCACAGTTCT+AGG | - | chr7.4:4847294-4847313 | None:intergenic | 45.0% | |
| CCGGTGTAGTTGCAAAAGTA+TGG | - | chr7.4:4847230-4847249 | None:intergenic | 45.0% | |
| CCTAGAACTGTGCCAGATAT+TGG | + | chr7.4:4847291-4847310 | MS.gene22783:CDS | 45.0% | |
| CGGGGGTTATGACCATTATT+GGG | - | chr7.4:4847339-4847358 | None:intergenic | 45.0% | |
| CGGTTATCTTGAAGTCCAAC+TGG | - | chr7.4:4846949-4846968 | None:intergenic | 45.0% | |
| CTTCCCTCTAATGGTAAGTG+GGG | + | chr7.4:4847534-4847553 | MS.gene22783:CDS | 45.0% | |
| CTTCCTTTCTTGAGCCTTTG+AGG | + | chr7.4:4846176-4846195 | MS.gene22783:intron | 45.0% | |
| CTTCTCAGTTGGCATCATCT+TGG | - | chr7.4:4847643-4847662 | None:intergenic | 45.0% | |
| CTTGTTTGCTTCCTTTCTCG+AGG | + | chr7.4:4846065-4846084 | MS.gene22783:intron | 45.0% | |
| CTTTGGACTACTCTCTTAGC+TGG | + | chr7.4:4846673-4846692 | MS.gene22783:CDS | 45.0% | |
| GAGTTGTTGTGTATCACCAC+TGG | - | chr7.4:4846713-4846732 | None:intergenic | 45.0% | |
| GATATCAGGGTAGACCAACT+TGG | + | chr7.4:4846878-4846897 | MS.gene22783:CDS | 45.0% | |
| GATCCCCACTTACCATTAGA+GGG | - | chr7.4:4847540-4847559 | None:intergenic | 45.0% | |
| GATGCTTGGGATCTCCATAA+CGG | - | chr7.4:4847683-4847702 | None:intergenic | 45.0% | |
| GCGCCAATTCTGATCCATTA+TGG | + | chr7.4:4847046-4847065 | MS.gene22783:CDS | 45.0% | |
| GGTCTTAATGGCTGGGAATA+TGG | - | chr7.4:4847150-4847169 | None:intergenic | 45.0% | |
| GGTGCTTTAACGCTGTATGT+TGG | + | chr7.4:4847771-4847790 | MS.gene22783:CDS | 45.0% | |
| GGTTGCAATGGAAAACCGTT+TGG | - | chr7.4:4847171-4847190 | None:intergenic | 45.0% | |
| GGTTTGACTCAGGAAGAGTA+AGG | - | chr7.4:4848176-4848195 | None:intergenic | 45.0% | |
| GTATACGACGGCGAAGATAT+CGG | + | chr7.4:4845352-4845371 | MS.gene22783:CDS | 45.0% | |
| TAAGAGTAGTGCTCCACTTC+CGG | + | chr7.4:4847398-4847417 | MS.gene22783:CDS | 45.0% | |
| TAATTCATCAGCAGTCTGGC+TGG | + | chr7.4:4848139-4848158 | MS.gene22783:CDS | 45.0% | |
| TCACTTAATCATGTTCCCGC+CGG | + | chr7.4:4845554-4845573 | MS.gene22783:CDS | 45.0% | |
| TCAGGAAGAGTAAGGATGAG+TGG | - | chr7.4:4848168-4848187 | None:intergenic | 45.0% | |
| TCCCAGCCATTAAGACCAAA+CGG | + | chr7.4:4847153-4847172 | MS.gene22783:CDS | 45.0% | |
| TGCTGGTAGATCGGCAATAA+TGG | + | chr7.4:4847896-4847915 | MS.gene22783:CDS | 45.0% | |
| TTATTGCCGATCTACCAGCA+GGG | - | chr7.4:4847896-4847915 | None:intergenic | 45.0% | |
| TTCAAATCTCCACTCCGTTG+CGG | - | chr7.4:4847369-4847388 | None:intergenic | 45.0% | |
| TTCATGGCTTTCGGTCCATT+TGG | - | chr7.4:4846919-4846938 | None:intergenic | 45.0% | |
| TTCGGTCCATTTGGTTGACT+CGG | - | chr7.4:4846910-4846929 | None:intergenic | 45.0% | |
| TTCGTTGATCTTACCGGAAG+TGG | - | chr7.4:4847414-4847433 | None:intergenic | 45.0% | |
| TTTGACGAGAATCAGCAACG+TGG | + | chr7.4:4845756-4845775 | MS.gene22783:intron | 45.0% | |
| ! | CAGCTAAGAGTGTATGGCTT+TGG | + | chr7.4:4846656-4846675 | MS.gene22783:CDS | 45.0% |
| ! | GGAGCACTACTCTTAGGATT+CGG | - | chr7.4:4847393-4847412 | None:intergenic | 45.0% |
| ! | GGTTGATATTCTGGACCATG+TGG | - | chr7.4:4847483-4847502 | None:intergenic | 45.0% |
| ! | TGTGTATCACCACTGGTTAG+TGG | - | chr7.4:4846706-4846725 | None:intergenic | 45.0% |
| ! | TTGCAGCAGCTAAGAGTGTA+TGG | + | chr7.4:4846650-4846669 | MS.gene22783:CDS | 45.0% |
| !! | AACCGTTTGGTCTTAATGGC+TGG | - | chr7.4:4847158-4847177 | None:intergenic | 45.0% |
| !! | ACCGTTTGGTCTTAATGGCT+GGG | - | chr7.4:4847157-4847176 | None:intergenic | 45.0% |
| !! | AGTGGTGCAGATGCTTTTTG+AGG | - | chr7.4:4846628-4846647 | None:intergenic | 45.0% |
| !! | GATTGCGGTAGAAGTTGATG+TGG | + | chr7.4:4845865-4845884 | MS.gene22783:intron | 45.0% |
| AACAACCCCTGCTGGTAGAT+CGG | + | chr7.4:4847887-4847906 | MS.gene22783:CDS | 50.0% | |
| ACACCTCAAAGCCTCGAGAA+AGG | - | chr7.4:4846079-4846098 | None:intergenic | 50.0% | |
| ACCACTCAAGGCTATCCACA+TGG | + | chr7.4:4847465-4847484 | MS.gene22783:CDS | 50.0% | |
| ACCTACACACTCGACAGCAA+TGG | + | chr7.4:4847500-4847519 | MS.gene22783:CDS | 50.0% | |
| ACCTCCTCATTCGCAGTTGA+TGG | - | chr7.4:4846585-4846604 | None:intergenic | 50.0% | |
| ATTGGCGCGCTCAAAGTTTG+TGG | - | chr7.4:4847034-4847053 | None:intergenic | 50.0% | |
| CCTACACACTCGACAGCAAT+GGG | + | chr7.4:4847501-4847520 | MS.gene22783:CDS | 50.0% | |
| CCTTGTCGACATGCTGTTCT+GGG | + | chr7.4:4846492-4846511 | MS.gene22783:CDS | 50.0% | |
| CGAAGTAAGTTCGTTACCGG+CGG | - | chr7.4:4845573-4845592 | None:intergenic | 50.0% | |
| CTCTTAGCTGCTGCAACTAG+TGG | - | chr7.4:4846646-4846665 | None:intergenic | 50.0% | |
| CTGAGTCAAACCCCGATTCA+GGG | + | chr7.4:4848184-4848203 | MS.gene22783:CDS | 50.0% | |
| CTGCGCAATTGCATGTGGAT+CGG | - | chr7.4:4845417-4845436 | None:intergenic | 50.0% | |
| CTTCCTTTCTCGAGGCTTTG+AGG | + | chr7.4:4846073-4846092 | MS.gene22783:intron | 50.0% | |
| GAAGTAAGTTCGTTACCGGC+GGG | - | chr7.4:4845572-4845591 | None:intergenic | 50.0% | |
| GCGGGGGTTATGACCATTAT+TGG | - | chr7.4:4847340-4847359 | None:intergenic | 50.0% | |
| GGCGAAGATATCGGTATGGT+GGG | + | chr7.4:4845361-4845380 | MS.gene22783:CDS | 50.0% | |
| GGTGCAAAAGGAGGTTGCAA+TGG | - | chr7.4:4847183-4847202 | None:intergenic | 50.0% | |
| GTCAGAAGTCACCCCTGAAT+CGG | - | chr7.4:4848199-4848218 | None:intergenic | 50.0% | |
| GTGCATAGCAGTACCACTCA+AGG | + | chr7.4:4847453-4847472 | MS.gene22783:CDS | 50.0% | |
| TACAGACGCAGGTATACGAG+TGG | - | chr7.4:4845507-4845526 | None:intergenic | 50.0% | |
| TATTGCCGATCTACCAGCAG+GGG | - | chr7.4:4847895-4847914 | None:intergenic | 50.0% | |
| TCAGAAGTCACCCCTGAATC+GGG | - | chr7.4:4848198-4848217 | None:intergenic | 50.0% | |
| TCCATCAACTGCGAATGAGG+AGG | + | chr7.4:4846581-4846600 | MS.gene22783:CDS | 50.0% | |
| TCCTTGTCGACATGCTGTTC+TGG | + | chr7.4:4846491-4846510 | MS.gene22783:CDS | 50.0% | |
| TGAGTCAAACCCCGATTCAG+GGG | + | chr7.4:4848185-4848204 | MS.gene22783:CDS | 50.0% | |
| TGGACTACTCTCTTAGCTGG+AGG | + | chr7.4:4846676-4846695 | MS.gene22783:CDS | 50.0% | |
| TTGTTGCCAACAGTCCTAGG+TGG | - | chr7.4:4847255-4847274 | None:intergenic | 50.0% | |
| ! | ACCATGTGGATAGCCTTGAG+TGG | - | chr7.4:4847469-4847488 | None:intergenic | 50.0% |
| ! | GGAAGTGGAGCACTACTCTT+AGG | - | chr7.4:4847399-4847418 | None:intergenic | 50.0% |
| ! | GTATCACCACTGGTTAGTGG+AGG | - | chr7.4:4846703-4846722 | None:intergenic | 50.0% |
| ! | GTCTGAGCAGCATTTGAGAC+AGG | - | chr7.4:4846778-4846797 | None:intergenic | 50.0% |
| ! | TCGGTCCATTTGGTTGACTC+GGG | - | chr7.4:4846909-4846928 | None:intergenic | 50.0% |
| ! | TGACTCGGGTTTCTCCAAGT+TGG | - | chr7.4:4846895-4846914 | None:intergenic | 50.0% |
| ! | TGTGTGTTGCTGTGATTGCG+CGG | + | chr7.4:4845921-4845940 | MS.gene22783:intron | 50.0% |
| !! | AACATCGGTGTTGCGATGCT+TGG | - | chr7.4:4847697-4847716 | None:intergenic | 50.0% |
| !! | ACATCGGTGTTGCGATGCTT+GGG | - | chr7.4:4847696-4847715 | None:intergenic | 50.0% |
| !! | CCTCATTCGCAGTTGATGGA+GGG | - | chr7.4:4846581-4846600 | None:intergenic | 50.0% |
| !! | GAAAGCTCTGGAGAGTGCTA+TGG | + | chr7.4:4847719-4847738 | MS.gene22783:CDS | 50.0% |
| !! | TATACGAGTGGTGTCACCGT+AGG | - | chr7.4:4845495-4845514 | None:intergenic | 50.0% |
| !! | TCCTCATTCGCAGTTGATGG+AGG | - | chr7.4:4846582-4846601 | None:intergenic | 50.0% |
| ACCGTAGGCGGAGATGGAAA+CGG | - | chr7.4:4845480-4845499 | None:intergenic | 55.0% | |
| AGGTGGAGCGACAACTAACG+CGG | + | chr7.4:4845322-4845341 | MS.gene22783:CDS | 55.0% | |
| CAGAAGTCACCCCTGAATCG+GGG | - | chr7.4:4848197-4848216 | None:intergenic | 55.0% | |
| CCCAGAACAGCATGTCGACA+AGG | - | chr7.4:4846495-4846514 | None:intergenic | 55.0% | |
| CCCATTGCTGTCGAGTGTGT+AGG | - | chr7.4:4847504-4847523 | None:intergenic | 55.0% | |
| CCCTCCATCAACTGCGAATG+AGG | + | chr7.4:4846578-4846597 | MS.gene22783:CDS | 55.0% | |
| CCTGAATCGGGGTTTGACTC+AGG | - | chr7.4:4848186-4848205 | None:intergenic | 55.0% | |
| CCTGAGTCAAACCCCGATTC+AGG | + | chr7.4:4848183-4848202 | MS.gene22783:CDS | 55.0% | |
| CGACGGCGAAGATATCGGTA+TGG | + | chr7.4:4845357-4845376 | MS.gene22783:CDS | 55.0% | |
| CGGCGAAGATATCGGTATGG+TGG | + | chr7.4:4845360-4845379 | MS.gene22783:CDS | 55.0% | |
| CTGCTCAGACACAGCAACAG+GGG | + | chr7.4:4846788-4846807 | MS.gene22783:CDS | 55.0% | |
| GAGTGCTATGGAGCAGCAGA+TGG | + | chr7.4:4847731-4847750 | MS.gene22783:CDS | 55.0% | |
| GCATGTGGATCGGAGCCTTT+AGG | - | chr7.4:4845407-4845426 | None:intergenic | 55.0% | |
| GCTGCTCAGACACAGCAACA+GGG | + | chr7.4:4846787-4846806 | MS.gene22783:CDS | 55.0% | |
| TCTTGAAGTCCAACTGGGGG+TGG | - | chr7.4:4846943-4846962 | None:intergenic | 55.0% | |
| TGCTATGGAGCAGCAGATGG+TGG | + | chr7.4:4847734-4847753 | MS.gene22783:CDS | 55.0% | |
| TGCTCAGACACAGCAACAGG+GGG | + | chr7.4:4846789-4846808 | MS.gene22783:CDS | 55.0% | |
| TGCTGCTCAGACACAGCAAC+AGG | + | chr7.4:4846786-4846805 | MS.gene22783:CDS | 55.0% | |
| ! | GGGGGTGGATTCATGGCTTT+CGG | - | chr7.4:4846928-4846947 | None:intergenic | 55.0% |
| ! | GTGTGTTGCTGTGATTGCGC+GGG | + | chr7.4:4845922-4845941 | MS.gene22783:intron | 55.0% |
| ! | TCCAACTGGGGGTGGATTCA+TGG | - | chr7.4:4846935-4846954 | None:intergenic | 55.0% |
| ACTCCGTTGCGGAACAGTGC+GGG | - | chr7.4:4847358-4847377 | None:intergenic | 60.0% | |
| CACTCCGTTGCGGAACAGTG+CGG | - | chr7.4:4847359-4847378 | None:intergenic | 60.0% | |
| CCAACAGTCCTAGGTGGCAC+CGG | - | chr7.4:4847249-4847268 | None:intergenic | 60.0% | |
| CCCGTTTCCATCTCCGCCTA+CGG | + | chr7.4:4845476-4845495 | MS.gene22783:CDS | 60.0% | |
| CCGTAGGCGGAGATGGAAAC+GGG | - | chr7.4:4845479-4845498 | None:intergenic | 60.0% | |
| GCCATGAATCCACCCCCAGT+TGG | + | chr7.4:4846931-4846950 | MS.gene22783:CDS | 60.0% | |
| GCTCAGACACAGCAACAGGG+GGG | + | chr7.4:4846790-4846809 | MS.gene22783:CDS | 60.0% | |
| GGAGGACCTCCACTAACCAG+TGG | + | chr7.4:4846694-4846713 | MS.gene22783:CDS | 60.0% | |
| TGGAGCGACAACTAACGCGG+AGG | + | chr7.4:4845325-4845344 | MS.gene22783:CDS | 60.0% | |
| ! | CAGCACGCGCTTTCTAGCAC+CGG | + | chr7.4:4845527-4845546 | MS.gene22783:CDS | 60.0% |
| ! | CGACATGCTGTTCTGGGCAG+TGG | + | chr7.4:4846498-4846517 | MS.gene22783:CDS | 60.0% |
| !! | ACGAGTGGTGTCACCGTAGG+CGG | - | chr7.4:4845492-4845511 | None:intergenic | 60.0% |
| !! | CAACTACACCGGTGCCACCT+AGG | + | chr7.4:4847238-4847257 | MS.gene22783:CDS | 60.0% |
| ACCCCCGCACTGTTCCGCAA+CGG | + | chr7.4:4847352-4847371 | MS.gene22783:CDS | 65.0% | |
| AGCGCGTGCTGTACAGACGC+AGG | - | chr7.4:4845518-4845537 | None:intergenic | 65.0% | |
| CGCACTGTTCCGCAACGGAG+TGG | + | chr7.4:4847357-4847376 | MS.gene22783:CDS | 65.0% | |
| CTCCGTTGCGGAACAGTGCG+GGG | - | chr7.4:4847357-4847376 | None:intergenic | 65.0% | |
| TCCGTTGCGGAACAGTGCGG+GGG | - | chr7.4:4847356-4847375 | None:intergenic | 65.0% | |
| ! | CGCGGAGGCGCAGTATACGA+CGG | + | chr7.4:4845340-4845359 | MS.gene22783:CDS | 65.0% |
| ! | GGTGTCACCGTAGGCGGAGA+TGG | - | chr7.4:4845486-4845505 | None:intergenic | 65.0% |
| !! | CCGGTGCCACCTAGGACTGT+TGG | + | chr7.4:4847246-4847265 | MS.gene22783:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 4845314 | 4848224 | 4845314 | ID=MS.gene22783 |
| chr7.4 | mRNA | 4845314 | 4848224 | 4845314 | ID=MS.gene22783.t1;Parent=MS.gene22783 |
| chr7.4 | exon | 4845314 | 4845575 | 4845314 | ID=MS.gene22783.t1.exon1;Parent=MS.gene22783.t1 |
| chr7.4 | CDS | 4845314 | 4845575 | 4845314 | ID=cds.MS.gene22783.t1;Parent=MS.gene22783.t1 |
| chr7.4 | exon | 4846464 | 4847931 | 4846464 | ID=MS.gene22783.t1.exon2;Parent=MS.gene22783.t1 |
| chr7.4 | CDS | 4846464 | 4847931 | 4846464 | ID=cds.MS.gene22783.t1;Parent=MS.gene22783.t1 |
| chr7.4 | exon | 4848038 | 4848224 | 4848038 | ID=MS.gene22783.t1.exon3;Parent=MS.gene22783.t1 |
| chr7.4 | CDS | 4848038 | 4848224 | 4848038 | ID=cds.MS.gene22783.t1;Parent=MS.gene22783.t1 |
| Gene Sequence |
| Protein sequence |
