Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050880.t1 | RHN49279.1 | 93.6 | 450 | 25 | 1 | 4 | 453 | 2 | 447 | 3.20E-252 | 880.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050880.t1 | Q9SVS0 | 67.2 | 415 | 130 | 4 | 46 | 454 | 58 | 472 | 3.5e-170 | 599.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050880.t1 | A0A396H7P7 | 93.6 | 450 | 25 | 1 | 4 | 453 | 2 | 447 | 2.3e-252 | 880.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050880 | MS.gene066567 | 0.976575 | 4.34E-142 | -1.69E-46 |
| MS.gene050880 | MS.gene072473 | 0.810404 | 1.17E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050880.t1 | MTR_7g113450 | 93.333 | 450 | 26 | 1 | 4 | 453 | 2 | 447 | 0.0 | 872 |
| MS.gene050880.t1 | MTR_2g022770 | 81.184 | 473 | 71 | 2 | 1 | 455 | 1 | 473 | 0.0 | 796 |
| MS.gene050880.t1 | MTR_7g113450 | 92.763 | 304 | 22 | 0 | 4 | 307 | 2 | 305 | 0.0 | 587 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050880.t1 | AT4G21770 | 66.988 | 415 | 131 | 4 | 46 | 454 | 58 | 472 | 0.0 | 595 |
| MS.gene050880.t1 | AT4G21770 | 68.957 | 393 | 118 | 3 | 66 | 454 | 1 | 393 | 0.0 | 582 |
Find 109 sgRNAs with CRISPR-Local
Find 304 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACCTCAACAAGCATGAATT+TGG | 0.218911 | 7.1:+2989642 | MS.gene050880:CDS |
| AAGAAACGGCTGTAATAAAT+TGG | 0.246669 | 7.1:+2993779 | MS.gene050880:CDS |
| CCGTCTTTCATTGCAAAATT+CGG | 0.253470 | 7.1:+2991062 | MS.gene050880:CDS |
| GTTGCAGATCTGATTCAATT+TGG | 0.281393 | 7.1:+2989947 | MS.gene050880:CDS |
| ACAATACATCTGTAAAGATT+TGG | 0.281671 | 7.1:+2989809 | MS.gene050880:CDS |
| ACAACTAAGTGTTCAATTCT+TGG | 0.290781 | 7.1:-2989765 | None:intergenic |
| CTGTCGTAGCCTCGGCGTTC+CGG | 0.315206 | 7.1:+2989584 | MS.gene050880:CDS |
| TTCAAGCTTGTCAAATTTCA+TGG | 0.315468 | 7.1:+2993842 | MS.gene050880:CDS |
| TGTAAAATCAACCTTCTTAC+TGG | 0.321032 | 7.1:+2992435 | MS.gene050880:CDS |
| CGTCTTTCATTGCAAAATTC+GGG | 0.339193 | 7.1:+2991063 | MS.gene050880:CDS |
| TACATAGTATCACCAATTAT+TGG | 0.340825 | 7.1:-2993670 | None:intergenic |
| CCGTGCAGTTATCAATTTGA+TGG | 0.341065 | 7.1:-2990930 | None:intergenic |
| ACCTTTGCAACTCGTGCCTT+GGG | 0.344438 | 7.1:+2990883 | MS.gene050880:CDS |
| GAGGTGTTTGTTAAGTGATA+TGG | 0.358711 | 7.1:-2989625 | None:intergenic |
| GCTTGCAAGGCACCAATAAT+TGG | 0.358878 | 7.1:+2993658 | MS.gene050880:CDS |
| AATCCTGGACTTAATCCATT+TGG | 0.359578 | 7.1:+2993721 | MS.gene050880:CDS |
| ACAGAGCTGGTTTGCCTTGG+TGG | 0.361729 | 7.1:+2993884 | MS.gene050880:CDS |
| GTAGCGGTTGGAGGAGGTTC+CGG | 0.372880 | 7.1:-2989995 | None:intergenic |
| ATGAAATTTGACAAGCTTGA+AGG | 0.384279 | 7.1:-2993840 | None:intergenic |
| AACCTTTGCAACTCGTGCCT+TGG | 0.385948 | 7.1:+2990882 | MS.gene050880:CDS |
| TTACAGATGTATTGTAAAAC+AGG | 0.388608 | 7.1:-2989801 | None:intergenic |
| ACAACTTTCTTCAATGTTGC+CGG | 0.392445 | 7.1:-2990857 | None:intergenic |
| GCAGCTTCTCCTTTACCAAT+TGG | 0.403389 | 7.1:+2991468 | MS.gene050880:CDS |
| CAGCTGCCGCGGAACAAGAT+TGG | 0.406189 | 7.1:-2989564 | None:intergenic |
| TGCACTCGCAGGTAAGTTCC+TGG | 0.426326 | 7.1:-2990151 | None:intergenic |
| CAAAGAAGCAACTGAACCAT+TGG | 0.428367 | 7.1:+2990039 | MS.gene050880:CDS |
| ATTTACCTAGGATAACGCTT+GGG | 0.431357 | 7.1:-2990181 | None:intergenic |
| AGTCGAGGAGCCGTGTTAGT+AGG | 0.435108 | 7.1:-2991513 | None:intergenic |
| TTGAACAACAATAGCTGGCC+AGG | 0.441571 | 7.1:-2992358 | None:intergenic |
| AGGTGTTTGTTAAGTGATAT+GGG | 0.442132 | 7.1:-2989624 | None:intergenic |
| ATGAATTTGGTTGGTGTTGT+CGG | 0.448484 | 7.1:+2989655 | MS.gene050880:CDS |
| GAAGCAATCGATCATACTTC+GGG | 0.456347 | 7.1:-2989719 | None:intergenic |
| CGCGGCAGCTGTCGTAGCCT+CGG | 0.459951 | 7.1:+2989576 | MS.gene050880:CDS |
| TTTACAGAGCTGGTTTGCCT+TGG | 0.460289 | 7.1:+2993881 | MS.gene050880:CDS |
| AATATTGTGTTGAAGATTGT+GGG | 0.461791 | 7.1:+2992385 | MS.gene050880:CDS |
| TAGCCTCGGCGTTCCGGATG+CGG | 0.465407 | 7.1:+2989590 | MS.gene050880:CDS |
| AGCTCAATTTGCTGCTTGCA+AGG | 0.465415 | 7.1:+2993645 | MS.gene050880:CDS |
| TTGATAACTGCACGGAAGGC+TGG | 0.465999 | 7.1:+2990938 | MS.gene050880:CDS |
| TTAGGTGCTATGAGATTGAC+TGG | 0.466195 | 7.1:+2990287 | MS.gene050880:intron |
| GTAGCTTACTGTTTCGCTGA+TGG | 0.466204 | 7.1:-2989697 | None:intergenic |
| TTTGATGGGTAGTTATCAAA+GGG | 0.466598 | 7.1:-2990915 | None:intergenic |
| ATTTATGTGTAGCGTAGTAT+TGG | 0.471915 | 7.1:+2991018 | MS.gene050880:intron |
| TCTTACTGGTCGAACTCATC+AGG | 0.474622 | 7.1:+2992449 | MS.gene050880:CDS |
| GGAACCGCACTCGCCGCATC+CGG | 0.475158 | 7.1:-2989603 | None:intergenic |
| ATTTGCTCTGCAGTAGCGGT+TGG | 0.475754 | 7.1:-2990007 | None:intergenic |
| TGCTCTGCAGTAGCGGTTGG+AGG | 0.479465 | 7.1:-2990004 | None:intergenic |
| AAAGAGCCTAGTGTTGCAAT+TGG | 0.490916 | 7.1:+2993817 | MS.gene050880:CDS |
| ATTGACTGCAGATGGTATCA+AGG | 0.491296 | 7.1:+2992290 | MS.gene050880:intron |
| GATGAATACATTTACAGAGC+TGG | 0.491345 | 7.1:+2993871 | MS.gene050880:CDS |
| ATGAGATTGACTGGAGATCA+AGG | 0.491460 | 7.1:+2990296 | MS.gene050880:CDS |
| TTTCCAAATGGATTAAGTCC+AGG | 0.503496 | 7.1:-2993724 | None:intergenic |
| TAGTGCTTAATGATTCCAAT+TGG | 0.508620 | 7.1:-2991483 | None:intergenic |
| TCATCTTGAACAACAATAGC+TGG | 0.509716 | 7.1:-2992363 | None:intergenic |
| TGGAATGCAGAAAGATTCCC+TGG | 0.510667 | 7.1:+2992340 | MS.gene050880:CDS |
| TATTTGTCAACTTGAGGTCA+TGG | 0.513587 | 7.1:+2992320 | MS.gene050880:CDS |
| TAAGATGGGTTCGGTGGCGG+TGG | 0.514367 | 7.1:+2989539 | None:intergenic |
| ATCATCTCTGCAATTGCAGC+AGG | 0.520543 | 7.1:-2993697 | None:intergenic |
| ATTTGATGGGTAGTTATCAA+AGG | 0.524439 | 7.1:-2990916 | None:intergenic |
| CGTGCAGTTATCAATTTGAT+GGG | 0.526284 | 7.1:-2990929 | None:intergenic |
| AGTAAAAGATAAGATGGGTT+CGG | 0.528067 | 7.1:+2989530 | None:intergenic |
| TCAAGCTTGTCAAATTTCAT+GGG | 0.528140 | 7.1:+2993843 | MS.gene050880:CDS |
| TTAATGATTCCAATTGGTAA+AGG | 0.533290 | 7.1:-2991477 | None:intergenic |
| GGAAGCAATCGATCATACTT+CGG | 0.533740 | 7.1:-2989720 | None:intergenic |
| ATTGCAGAGATGATTAATCC+TGG | 0.537124 | 7.1:+2993706 | MS.gene050880:CDS |
| TCTGCAGTAGCGGTTGGAGG+AGG | 0.537831 | 7.1:-2990001 | None:intergenic |
| GAGCTGGTTTGCCTTGGTGG+AGG | 0.539193 | 7.1:+2993887 | MS.gene050880:CDS |
| ACTAAGTGTTCAATTCTTGG+TGG | 0.540008 | 7.1:-2989762 | None:intergenic |
| GAATATTGTGTTGAAGATTG+TGG | 0.542188 | 7.1:+2992384 | MS.gene050880:CDS |
| TCTAATTTGCTCTGCAGTAG+CGG | 0.543133 | 7.1:-2990011 | None:intergenic |
| AGATAAGATGGGTTCGGTGG+CGG | 0.545265 | 7.1:+2989536 | None:intergenic |
| TGGGGTGCACGTGCACTCGC+AGG | 0.546368 | 7.1:-2990162 | None:intergenic |
| GAATTTGGCACTTACAAATG+AGG | 0.550102 | 7.1:-2989837 | None:intergenic |
| TGTGTAGCGTAGTATTGGCT+AGG | 0.552185 | 7.1:+2991023 | MS.gene050880:intron |
| AATTTACCTAGGATAACGCT+TGG | 0.552883 | 7.1:-2990182 | None:intergenic |
| CAAATTGATAACTGCACGGA+AGG | 0.558184 | 7.1:+2990934 | MS.gene050880:CDS |
| CGAGGCTACGACAGCTGCCG+CGG | 0.558845 | 7.1:-2989575 | None:intergenic |
| CGTTCCGGATGCGGCGAGTG+CGG | 0.562174 | 7.1:+2989599 | MS.gene050880:CDS |
| CACTTAGTTGTTTCACGAGG+AGG | 0.563811 | 7.1:+2989777 | MS.gene050880:CDS |
| CTTGGTGGAGATTTGTGTGT+AGG | 0.564422 | 7.1:-2989747 | None:intergenic |
| TCCCAAGGCACGAGTTGCAA+AGG | 0.567562 | 7.1:-2990884 | None:intergenic |
| TGAAGGCCAATTGCAACACT+AGG | 0.568515 | 7.1:-2993823 | None:intergenic |
| AACCAAATTCATGCTTGTTG+AGG | 0.571349 | 7.1:-2989644 | None:intergenic |
| ATGGCATATTTGTCAACTTG+AGG | 0.572439 | 7.1:+2992314 | MS.gene050880:CDS |
| TCAACAAGCATGAATTTGGT+TGG | 0.576730 | 7.1:+2989646 | MS.gene050880:CDS |
| TTGACTGCAGATGGTATCAA+GGG | 0.577829 | 7.1:+2992291 | MS.gene050880:intron |
| GATGAGTTCGACCAGTAAGA+AGG | 0.590412 | 7.1:-2992446 | None:intergenic |
| TTACATACAGAAGTACCAGC+AGG | 0.592818 | 7.1:-2990358 | None:intergenic |
| GTGAATCAGTTTGTTGAACC+AGG | 0.597573 | 7.1:+2990133 | MS.gene050880:CDS |
| GCTCCTCGACTTATTTCTGA+AGG | 0.598052 | 7.1:+2991525 | MS.gene050880:CDS |
| CTGCAGATGGTATCAAGGGA+TGG | 0.598332 | 7.1:+2992295 | MS.gene050880:intron |
| TGCACCCCAAGCGTTATCCT+AGG | 0.608599 | 7.1:+2990176 | MS.gene050880:CDS |
| CTATATGCGTCCTACTAACA+CGG | 0.608861 | 7.1:+2991503 | MS.gene050880:CDS |
| GGTTAGGTAGGGGAAACTAC+CGG | 0.618843 | 7.1:+2990838 | MS.gene050880:intron |
| TGAACAACAATAGCTGGCCA+GGG | 0.627097 | 7.1:-2992357 | None:intergenic |
| CAAAGGGGTTGTCAATCCCA+AGG | 0.627297 | 7.1:-2990899 | None:intergenic |
| GGAGATTTGTGTGTAGGACA+TGG | 0.631314 | 7.1:-2989741 | None:intergenic |
| GTGGCGCCAATCTTGTTCCG+CGG | 0.631844 | 7.1:+2989558 | MS.gene050880:CDS |
| TTTACCTAGGATAACGCTTG+GGG | 0.635968 | 7.1:-2990180 | None:intergenic |
| GAGATCAAGGATCATAGCTG+TGG | 0.639469 | 7.1:+2990309 | MS.gene050880:CDS |
| ATCAAGGATCATAGCTGTGG+AGG | 0.645787 | 7.1:+2990312 | MS.gene050880:CDS |
| TCGCCGCATCCGGAACGCCG+AGG | 0.647925 | 7.1:-2989593 | None:intergenic |
| CCATCAAATTGATAACTGCA+CGG | 0.652336 | 7.1:+2990930 | MS.gene050880:CDS |
| AAAAGATAAGATGGGTTCGG+TGG | 0.652380 | 7.1:+2989533 | None:intergenic |
| ACTGATTCACATCAGTTACA+CGG | 0.683807 | 7.1:-2990120 | None:intergenic |
| ATAAATTGGATTGCACAACA+CGG | 0.689490 | 7.1:+2993793 | MS.gene050880:CDS |
| TTGATGGGTAGTTATCAAAG+GGG | 0.694436 | 7.1:-2990914 | None:intergenic |
| TTACCTTCAGAAATAAGTCG+AGG | 0.695194 | 7.1:-2991528 | None:intergenic |
| ATTGTGTTGAAGATTGTGGG+TGG | 0.705277 | 7.1:+2992388 | MS.gene050880:CDS |
| GAACACTTAGTTGTTTCACG+AGG | 0.728290 | 7.1:+2989774 | MS.gene050880:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGATTAAATAAAATTTGAAT+AGG | + | chr7.1:2992110-2992129 | MS.gene050880:intron | 10.0% |
| !! | ATAATCAGATAAAAGAAATA+AGG | - | chr7.1:2993580-2993599 | None:intergenic | 15.0% |
| !!! | AATGTATTCTTTTCTATATT+TGG | + | chr7.1:2990817-2990836 | MS.gene050880:intron | 15.0% |
| !!! | CACTTAATTATTTTTTTTTC+AGG | + | chr7.1:2991413-2991432 | MS.gene050880:intron | 15.0% |
| !!! | TCAAATATTATAAGTTGATT+AGG | - | chr7.1:2992093-2992112 | None:intergenic | 15.0% |
| !!! | TGGTATTTTTAATGAAAAAT+AGG | + | chr7.1:2992866-2992885 | MS.gene050880:intron | 15.0% |
| !!! | TTTAAAGTTTAACTTTACAA+TGG | - | chr7.1:2992193-2992212 | None:intergenic | 15.0% |
| !! | AAATTCAAACAGTACATAAA+AGG | - | chr7.1:2992487-2992506 | None:intergenic | 20.0% |
| !! | AGCATTTACATGATATATAT+AGG | + | chr7.1:2993400-2993419 | MS.gene050880:intron | 20.0% |
| !! | ATATATAGGAGATACTATAT+AGG | + | chr7.1:2993414-2993433 | MS.gene050880:intron | 20.0% |
| !! | ATTTAAGTCACTATATCAAT+AGG | - | chr7.1:2993610-2993629 | None:intergenic | 20.0% |
| !! | CTTATCATATCATGTAAATA+GGG | - | chr7.1:2993481-2993500 | None:intergenic | 20.0% |
| !! | TACAACTAACTTAACTATAA+TGG | - | chr7.1:2991805-2991824 | None:intergenic | 20.0% |
| !! | TTTAACCATATGATTTAGTT+AGG | + | chr7.1:2992040-2992059 | MS.gene050880:intron | 20.0% |
| !! | TTTAAGTCACTATATCAATA+GGG | - | chr7.1:2993609-2993628 | None:intergenic | 20.0% |
| !!! | AAATATAGCTCAATTTTAGA+TGG | - | chr7.1:2992768-2992787 | None:intergenic | 20.0% |
| !!! | ATTCTTTTCTATATTTGGTT+AGG | + | chr7.1:2990822-2990841 | MS.gene050880:intron | 20.0% |
| !!! | CATAATGTTTTGAAATTTGT+GGG | - | chr7.1:2993001-2993020 | None:intergenic | 20.0% |
| !!! | GGCATTCTTAATATATTTTT+AGG | + | chr7.1:2990269-2990288 | MS.gene050880:intron | 20.0% |
| !!! | TAAAAGGGTATTAGAAAAAA+GGG | - | chr7.1:2993240-2993259 | None:intergenic | 20.0% |
| !!! | TACTTCACTATTTCATTTTA+AGG | - | chr7.1:2991593-2991612 | None:intergenic | 20.0% |
| !!! | TATTTCATTTTAAGGTTCTT+GGG | - | chr7.1:2991585-2991604 | None:intergenic | 20.0% |
| !!! | TCTTTATTGTATTTTCCAAA+TGG | - | chr7.1:2993739-2993758 | None:intergenic | 20.0% |
| !!! | TGATTGATAATTCTTATCTT+CGG | + | chr7.1:2992578-2992597 | MS.gene050880:intron | 20.0% |
| !!! | TTTAGTTTTATACTACATGA+AGG | + | chr7.1:2991997-2992016 | MS.gene050880:intron | 20.0% |
| ! | AAAACCATTATTGCTTGATA+AGG | - | chr7.1:2990557-2990576 | None:intergenic | 25.0% |
| ! | AAAGTTATTTATCCCTGTAT+AGG | + | chr7.1:2990406-2990425 | MS.gene050880:intron | 25.0% |
| ! | AATATTGTGTTGAAGATTGT+GGG | + | chr7.1:2992385-2992404 | MS.gene050880:CDS | 25.0% |
| ! | ACAATACATCTGTAAAGATT+TGG | + | chr7.1:2989809-2989828 | MS.gene050880:CDS | 25.0% |
| ! | ACTAACATTCTAATTTACCT+AGG | - | chr7.1:2990196-2990215 | None:intergenic | 25.0% |
| ! | AGGTAAATTAGAATGTTAGT+TGG | + | chr7.1:2990196-2990215 | MS.gene050880:intron | 25.0% |
| ! | ATAGAAAAGAATACATTGCA+CGG | - | chr7.1:2990814-2990833 | None:intergenic | 25.0% |
| ! | ATGTATTATAAGCAACTTCT+AGG | + | chr7.1:2991637-2991656 | MS.gene050880:intron | 25.0% |
| ! | ATTCTATAAGAATCCTATAC+AGG | - | chr7.1:2990422-2990441 | None:intergenic | 25.0% |
| ! | ATTTGTGGGATAAATATTCT+CGG | - | chr7.1:2992987-2993006 | None:intergenic | 25.0% |
| ! | CACTTCTTGAAAAGAATAAA+AGG | + | chr7.1:2991921-2991940 | MS.gene050880:intron | 25.0% |
| ! | GCTTATCATATCATGTAAAT+AGG | - | chr7.1:2993482-2993501 | None:intergenic | 25.0% |
| ! | TAACAGTATAAGCTATGAAA+TGG | - | chr7.1:2991100-2991119 | None:intergenic | 25.0% |
| ! | TACATAGTATCACCAATTAT+TGG | - | chr7.1:2993673-2993692 | None:intergenic | 25.0% |
| ! | TCAAGAAGTGGAATATTTAA+AGG | - | chr7.1:2991911-2991930 | None:intergenic | 25.0% |
| ! | TGATAAAAATTGATTACGAG+TGG | - | chr7.1:2989883-2989902 | None:intergenic | 25.0% |
| ! | TGTATTATAAGCAACTTCTA+GGG | + | chr7.1:2991638-2991657 | MS.gene050880:intron | 25.0% |
| ! | TTAATGATTCCAATTGGTAA+AGG | - | chr7.1:2991480-2991499 | None:intergenic | 25.0% |
| ! | TTACAGATGTATTGTAAAAC+AGG | - | chr7.1:2989804-2989823 | None:intergenic | 25.0% |
| ! | TTAGAATGTTAGTTGGAAAT+TGG | + | chr7.1:2990203-2990222 | MS.gene050880:intron | 25.0% |
| ! | TTCTATAAGAATCCTATACA+GGG | - | chr7.1:2990421-2990440 | None:intergenic | 25.0% |
| ! | TTTCTATATTTGGTTAGGTA+GGG | + | chr7.1:2990827-2990846 | MS.gene050880:intron | 25.0% |
| !! | CATGAAATTAAAACCCATTT+TGG | + | chr7.1:2992922-2992941 | MS.gene050880:intron | 25.0% |
| !! | CTTTATAGTTTTTCCTTTGA+GGG | - | chr7.1:2990083-2990102 | None:intergenic | 25.0% |
| !! | GATTGATAATTCTTATCTTC+GGG | + | chr7.1:2992579-2992598 | MS.gene050880:intron | 25.0% |
| !! | TAAAATTCTAGCTAGGAATT+TGG | - | chr7.1:2989855-2989874 | None:intergenic | 25.0% |
| !! | TTTTCTATATTTGGTTAGGT+AGG | + | chr7.1:2990826-2990845 | MS.gene050880:intron | 25.0% |
| !! | TTTTTCTGAGTTCATATAGT+GGG | - | chr7.1:2990389-2990408 | None:intergenic | 25.0% |
| !!! | AATAGAGTTTGTTAGTACAA+CGG | - | chr7.1:2992730-2992749 | None:intergenic | 25.0% |
| !!! | CTATTTCATTTTAAGGTTCT+TGG | - | chr7.1:2991586-2991605 | None:intergenic | 25.0% |
| !!! | CTTTTATTCTTTTCAAGAAG+TGG | - | chr7.1:2991923-2991942 | None:intergenic | 25.0% |
| !!! | GCATAATGTTTTGAAATTTG+TGG | - | chr7.1:2993002-2993021 | None:intergenic | 25.0% |
| !!! | GTAAAAGGGTATTAGAAAAA+AGG | - | chr7.1:2993241-2993260 | None:intergenic | 25.0% |
| AAGAAACGGCTGTAATAAAT+TGG | + | chr7.1:2993779-2993798 | MS.gene050880:CDS | 30.0% | |
| ACAACTAAGTGTTCAATTCT+TGG | - | chr7.1:2989768-2989787 | None:intergenic | 30.0% | |
| ACTAACAAACTCTATTGTTC+TGG | + | chr7.1:2992734-2992753 | MS.gene050880:intron | 30.0% | |
| ATAAACTTCCAGAAAACGAA+TGG | - | chr7.1:2992838-2992857 | None:intergenic | 30.0% | |
| ATAAATTGGATTGCACAACA+CGG | + | chr7.1:2993793-2993812 | MS.gene050880:CDS | 30.0% | |
| ATAACAACATGATGTGTCAA+TGG | + | chr7.1:2992155-2992174 | MS.gene050880:intron | 30.0% | |
| ATACATTGCACGGAAAATTT+AGG | - | chr7.1:2990804-2990823 | None:intergenic | 30.0% | |
| ATATTTAAAGGAGAGAGGAT+AGG | - | chr7.1:2991899-2991918 | None:intergenic | 30.0% | |
| ATCAATGTAGAAATTGCCAT+TGG | - | chr7.1:2990516-2990535 | None:intergenic | 30.0% | |
| ATGAAATTTGACAAGCTTGA+AGG | - | chr7.1:2993843-2993862 | None:intergenic | 30.0% | |
| ATGGCAATTTCTACATTGAT+AGG | + | chr7.1:2990516-2990535 | MS.gene050880:intron | 30.0% | |
| ATTGTCAGAATTCTGAGTAA+GGG | - | chr7.1:2991769-2991788 | None:intergenic | 30.0% | |
| ATTTATGTGTAGCGTAGTAT+TGG | + | chr7.1:2991018-2991037 | MS.gene050880:intron | 30.0% | |
| CACAATATAAGACACTTATC+AGG | - | chr7.1:2992251-2992270 | None:intergenic | 30.0% | |
| CCTCAAAGGAAAAACTATAA+AGG | + | chr7.1:2990081-2990100 | MS.gene050880:CDS | 30.0% | |
| CTGATAAGTGTCTTATATTG+TGG | + | chr7.1:2992249-2992268 | MS.gene050880:intron | 30.0% | |
| CTGCAGTCAATAAATTTACA+GGG | - | chr7.1:2992281-2992300 | None:intergenic | 30.0% | |
| CTGGAAGTTTATATCTTCTA+TGG | + | chr7.1:2992846-2992865 | MS.gene050880:intron | 30.0% | |
| GAATATTGTGTTGAAGATTG+TGG | + | chr7.1:2992384-2992403 | MS.gene050880:CDS | 30.0% | |
| TAACAACATGATGTGTCAAT+GGG | + | chr7.1:2992156-2992175 | MS.gene050880:intron | 30.0% | |
| TAGTGCTTAATGATTCCAAT+TGG | - | chr7.1:2991486-2991505 | None:intergenic | 30.0% | |
| TCAAGCTTGTCAAATTTCAT+GGG | + | chr7.1:2993843-2993862 | MS.gene050880:CDS | 30.0% | |
| TCATGTTGTTATAGTACAAC+AGG | - | chr7.1:2992147-2992166 | None:intergenic | 30.0% | |
| TCTCAAGAATGATTGTTTGT+AGG | + | chr7.1:2990607-2990626 | MS.gene050880:intron | 30.0% | |
| TCTGCAGTCAATAAATTTAC+AGG | - | chr7.1:2992282-2992301 | None:intergenic | 30.0% | |
| TGCCAAACATTATCATATCA+TGG | - | chr7.1:2990253-2990272 | None:intergenic | 30.0% | |
| TGTAAAATCAACCTTCTTAC+TGG | + | chr7.1:2992435-2992454 | MS.gene050880:CDS | 30.0% | |
| TTACTCAGAATTCTGACAAT+CGG | + | chr7.1:2991769-2991788 | MS.gene050880:intron | 30.0% | |
| TTCAAGCTTGTCAAATTTCA+TGG | + | chr7.1:2993842-2993861 | MS.gene050880:CDS | 30.0% | |
| TTCTATATTTGGTTAGGTAG+GGG | + | chr7.1:2990828-2990847 | MS.gene050880:intron | 30.0% | |
| TTGTTATAGTACAACAGGTT+TGG | - | chr7.1:2992142-2992161 | None:intergenic | 30.0% | |
| ! | AGCCATGATATGATAATGTT+TGG | + | chr7.1:2990248-2990267 | MS.gene050880:intron | 30.0% |
| ! | AGGTGTTTGTTAAGTGATAT+GGG | - | chr7.1:2989627-2989646 | None:intergenic | 30.0% |
| ! | ATTTGATGGGTAGTTATCAA+AGG | - | chr7.1:2990919-2990938 | None:intergenic | 30.0% |
| ! | CCTTTATAGTTTTTCCTTTG+AGG | - | chr7.1:2990084-2990103 | None:intergenic | 30.0% |
| ! | CTTTTTCTGAGTTCATATAG+TGG | - | chr7.1:2990390-2990409 | None:intergenic | 30.0% |
| ! | GGAAGAATAAAATTCTAGCT+AGG | - | chr7.1:2989862-2989881 | None:intergenic | 30.0% |
| ! | GTAAATTTATTGACTGCAGA+TGG | + | chr7.1:2992282-2992301 | MS.gene050880:intron | 30.0% |
| ! | TTTGATGGGTAGTTATCAAA+GGG | - | chr7.1:2990918-2990937 | None:intergenic | 30.0% |
| ! | TTTTCTGAGTTCATATAGTG+GGG | - | chr7.1:2990388-2990407 | None:intergenic | 30.0% |
| AAGCCTATCCAAAATCAATC+CGG | - | chr7.1:2993315-2993334 | None:intergenic | 35.0% | |
| AATCCTGGACTTAATCCATT+TGG | + | chr7.1:2993721-2993740 | MS.gene050880:CDS | 35.0% | |
| AATTTACCTAGGATAACGCT+TGG | - | chr7.1:2990185-2990204 | None:intergenic | 35.0% | |
| ACAACTTTCTTCAATGTTGC+CGG | - | chr7.1:2990860-2990879 | None:intergenic | 35.0% | |
| ACTAAGTGTTCAATTCTTGG+TGG | - | chr7.1:2989765-2989784 | None:intergenic | 35.0% | |
| AGACATTACACACACCAAAA+TGG | - | chr7.1:2992939-2992958 | None:intergenic | 35.0% | |
| AGGTCCTTATCAAGCAATAA+TGG | + | chr7.1:2990550-2990569 | MS.gene050880:intron | 35.0% | |
| ATAAGACTTAGTGTGTGTGT+TGG | - | chr7.1:2989914-2989933 | None:intergenic | 35.0% | |
| ATGCGCCTAACTAAATCATA+TGG | - | chr7.1:2992048-2992067 | None:intergenic | 35.0% | |
| ATGGCATATTTGTCAACTTG+AGG | + | chr7.1:2992314-2992333 | MS.gene050880:CDS | 35.0% | |
| ATTGCAGAGATGATTAATCC+TGG | + | chr7.1:2993706-2993725 | MS.gene050880:CDS | 35.0% | |
| ATTTACCTAGGATAACGCTT+GGG | - | chr7.1:2990184-2990203 | None:intergenic | 35.0% | |
| ATTTCTACATTGATAGGCGT+TGG | + | chr7.1:2990522-2990541 | MS.gene050880:intron | 35.0% | |
| CAAAACATTATGCACTCTAG+TGG | + | chr7.1:2993009-2993028 | MS.gene050880:intron | 35.0% | |
| CAGTGAGAGTGAAAAAGAAA+CGG | + | chr7.1:2993765-2993784 | MS.gene050880:CDS | 35.0% | |
| CCATTGGATACAAAAACTAC+AGG | - | chr7.1:2990500-2990519 | None:intergenic | 35.0% | |
| CCGTCTTTCATTGCAAAATT+CGG | + | chr7.1:2991062-2991081 | MS.gene050880:CDS | 35.0% | |
| CGTCTTTCATTGCAAAATTC+GGG | + | chr7.1:2991063-2991082 | MS.gene050880:CDS | 35.0% | |
| CGTGCAGTTATCAATTTGAT+GGG | - | chr7.1:2990932-2990951 | None:intergenic | 35.0% | |
| GAATTTGGCACTTACAAATG+AGG | - | chr7.1:2989840-2989859 | None:intergenic | 35.0% | |
| GACATTACACACACCAAAAT+GGG | - | chr7.1:2992938-2992957 | None:intergenic | 35.0% | |
| GATGAATACATTTACAGAGC+TGG | + | chr7.1:2993871-2993890 | MS.gene050880:CDS | 35.0% | |
| GATTGTCAGAATTCTGAGTA+AGG | - | chr7.1:2991770-2991789 | None:intergenic | 35.0% | |
| GGAGATACTATATAGGCTAA+AGG | + | chr7.1:2993421-2993440 | MS.gene050880:intron | 35.0% | |
| GTGGAATATTTAAAGGAGAG+AGG | - | chr7.1:2991904-2991923 | None:intergenic | 35.0% | |
| GTTGCAGATCTGATTCAATT+TGG | + | chr7.1:2989947-2989966 | MS.gene050880:CDS | 35.0% | |
| GTTTGATCTTAGTCGTTAGA+CGG | + | chr7.1:2991304-2991323 | MS.gene050880:intron | 35.0% | |
| TAATGTTCCATCTCGTTCTT+GGG | + | chr7.1:2993137-2993156 | MS.gene050880:intron | 35.0% | |
| TAGGTAGCTAATTTCCATCT+TGG | - | chr7.1:2992074-2992093 | None:intergenic | 35.0% | |
| TATAAAATCACACTCGCACA+AGG | + | chr7.1:2991273-2991292 | MS.gene050880:intron | 35.0% | |
| TATTTGTCAACTTGAGGTCA+TGG | + | chr7.1:2992320-2992339 | MS.gene050880:CDS | 35.0% | |
| TCAACAAGCATGAATTTGGT+TGG | + | chr7.1:2989646-2989665 | MS.gene050880:CDS | 35.0% | |
| TCATCTTGAACAACAATAGC+TGG | - | chr7.1:2992366-2992385 | None:intergenic | 35.0% | |
| TCTATACCCCTCAACAAAAT+GGG | + | chr7.1:2993055-2993074 | MS.gene050880:intron | 35.0% | |
| TGGTGTGTGTAATGTCTATT+CGG | + | chr7.1:2992942-2992961 | MS.gene050880:intron | 35.0% | |
| TTACCTTCAGAAATAAGTCG+AGG | - | chr7.1:2991531-2991550 | None:intergenic | 35.0% | |
| TTATAAGATAGCACGCTCTT+AGG | - | chr7.1:2993172-2993191 | None:intergenic | 35.0% | |
| TTTCTACATTGATAGGCGTT+GGG | + | chr7.1:2990523-2990542 | MS.gene050880:intron | 35.0% | |
| ! | AACCAAATTCATGCTTGTTG+AGG | - | chr7.1:2989647-2989666 | None:intergenic | 35.0% |
| ! | ACTGATTCACATCAGTTACA+CGG | - | chr7.1:2990123-2990142 | None:intergenic | 35.0% |
| ! | ATTATAAGCAACTTCTAGGG+AGG | + | chr7.1:2991641-2991660 | MS.gene050880:intron | 35.0% |
| ! | CCATCAAATTGATAACTGCA+CGG | + | chr7.1:2990930-2990949 | MS.gene050880:CDS | 35.0% |
| ! | CCGAATTTTGCAATGAAAGA+CGG | - | chr7.1:2991065-2991084 | None:intergenic | 35.0% |
| ! | CCTGTAGTTTTTGTATCCAA+TGG | + | chr7.1:2990497-2990516 | MS.gene050880:intron | 35.0% |
| ! | GAGGTGTTTGTTAAGTGATA+TGG | - | chr7.1:2989628-2989647 | None:intergenic | 35.0% |
| ! | TTGATGGGTAGTTATCAAAG+GGG | - | chr7.1:2990917-2990936 | None:intergenic | 35.0% |
| !! | ATGAATTTGGTTGGTGTTGT+CGG | + | chr7.1:2989655-2989674 | MS.gene050880:CDS | 35.0% |
| !! | CACTAAGTCTTATTTCGTGA+AGG | + | chr7.1:2989921-2989940 | MS.gene050880:intron | 35.0% |
| !! | GTATTTTGCTCTTGTTTCTC+CGG | + | chr7.1:2989976-2989995 | MS.gene050880:CDS | 35.0% |
| !! | TTTCCAAATGGATTAAGTCC+AGG | - | chr7.1:2993727-2993746 | None:intergenic | 35.0% |
| !!! | GTAGTTTTAGATAAACCTGC+TGG | + | chr7.1:2990343-2990362 | MS.gene050880:CDS | 35.0% |
| AAACAGGTTACAGCTCATGA+AGG | - | chr7.1:2992660-2992679 | None:intergenic | 40.0% | |
| AAAGAGCCTAGTGTTGCAAT+TGG | + | chr7.1:2993817-2993836 | MS.gene050880:CDS | 40.0% | |
| AACTTCCAGAAAACGAATGG+AGG | - | chr7.1:2992835-2992854 | None:intergenic | 40.0% | |
| AAGAACACCCAAATTGACAC+CGG | - | chr7.1:2991228-2991247 | None:intergenic | 40.0% | |
| ACATAGACTCTTCTCCTTCA+TGG | + | chr7.1:2993114-2993133 | MS.gene050880:intron | 40.0% | |
| ACTGATTGCTTCACTAGCAA+AGG | - | chr7.1:2992691-2992710 | None:intergenic | 40.0% | |
| ACTTCCAGAAAACGAATGGA+GGG | - | chr7.1:2992834-2992853 | None:intergenic | 40.0% | |
| ATGAAGGAGAAGAGTCTATG+TGG | - | chr7.1:2993115-2993134 | None:intergenic | 40.0% | |
| ATGAGATTGACTGGAGATCA+AGG | + | chr7.1:2990296-2990315 | MS.gene050880:CDS | 40.0% | |
| ATTGACTGCAGATGGTATCA+AGG | + | chr7.1:2992290-2992309 | MS.gene050880:intron | 40.0% | |
| ATTGTGTTGAAGATTGTGGG+TGG | + | chr7.1:2992388-2992407 | MS.gene050880:CDS | 40.0% | |
| CAAAGAAGCAACTGAACCAT+TGG | + | chr7.1:2990039-2990058 | MS.gene050880:CDS | 40.0% | |
| CACCTCAACAAGCATGAATT+TGG | + | chr7.1:2989642-2989661 | MS.gene050880:CDS | 40.0% | |
| CAGAATTCTGAGTAAGGGAA+AGG | - | chr7.1:2991764-2991783 | None:intergenic | 40.0% | |
| CCGTGCAGTTATCAATTTGA+TGG | - | chr7.1:2990933-2990952 | None:intergenic | 40.0% | |
| CTATACCCCTCAACAAAATG+GGG | + | chr7.1:2993056-2993075 | MS.gene050880:intron | 40.0% | |
| CTATATGCGTCCTACTAACA+CGG | + | chr7.1:2991503-2991522 | MS.gene050880:CDS | 40.0% | |
| CTGAAGGTAACTACGCAAAT+TGG | + | chr7.1:2991541-2991560 | MS.gene050880:intron | 40.0% | |
| GAAGCAATCGATCATACTTC+GGG | - | chr7.1:2989722-2989741 | None:intergenic | 40.0% | |
| GAGATGGAACATTACCATGA+AGG | - | chr7.1:2993131-2993150 | None:intergenic | 40.0% | |
| GGAAGCAATCGATCATACTT+CGG | - | chr7.1:2989723-2989742 | None:intergenic | 40.0% | |
| GTAATGTTCCATCTCGTTCT+TGG | + | chr7.1:2993136-2993155 | MS.gene050880:intron | 40.0% | |
| GTCTATACCCCTCAACAAAA+TGG | + | chr7.1:2993054-2993073 | MS.gene050880:intron | 40.0% | |
| TCCATGGTTCATGGTATTAG+TGG | + | chr7.1:2991670-2991689 | MS.gene050880:intron | 40.0% | |
| TTGACTGCAGATGGTATCAA+GGG | + | chr7.1:2992291-2992310 | MS.gene050880:intron | 40.0% | |
| TTGTAGGTTTGATGCTCAGT+AGG | + | chr7.1:2990623-2990642 | MS.gene050880:intron | 40.0% | |
| TTTACCTAGGATAACGCTTG+GGG | - | chr7.1:2990183-2990202 | None:intergenic | 40.0% | |
| ! | ATTCTCTCCGGTGTCAATTT+GGG | + | chr7.1:2991218-2991237 | MS.gene050880:intron | 40.0% |
| ! | CAAATTGATAACTGCACGGA+AGG | + | chr7.1:2990934-2990953 | MS.gene050880:CDS | 40.0% |
| ! | GAACACTTAGTTGTTTCACG+AGG | + | chr7.1:2989774-2989793 | MS.gene050880:CDS | 40.0% |
| ! | TTAGGTGCTATGAGATTGAC+TGG | + | chr7.1:2990287-2990306 | MS.gene050880:intron | 40.0% |
| ! | TTCTACATTGATAGGCGTTG+GGG | + | chr7.1:2990524-2990543 | MS.gene050880:intron | 40.0% |
| ! | TTGTTTTCGCTCTTTCAACG+CGG | - | chr7.1:2993343-2993362 | None:intergenic | 40.0% |
| !! | GAGATGTTGACTTGTGTGTT+TGG | - | chr7.1:2993085-2993104 | None:intergenic | 40.0% |
| !! | GTGAATCAGTTTGTTGAACC+AGG | + | chr7.1:2990133-2990152 | MS.gene050880:CDS | 40.0% |
| !! | TCTAATTTGCTCTGCAGTAG+CGG | - | chr7.1:2990014-2990033 | None:intergenic | 40.0% |
| !! | TTACATACAGAAGTACCAGC+AGG | - | chr7.1:2990361-2990380 | None:intergenic | 40.0% |
| !!! | GCTCTTTTTTGCAGAACCAA+TGG | - | chr7.1:2990058-2990077 | None:intergenic | 40.0% |
| !!! | TAGTGTGTGTGTTGGTTTTG+CGG | - | chr7.1:2989906-2989925 | None:intergenic | 40.0% |
| AAAGCCCAACTCTCAGTACA+AGG | - | chr7.1:2991728-2991747 | None:intergenic | 45.0% | |
| AACATGACCCAAGAACGAGA+TGG | - | chr7.1:2993147-2993166 | None:intergenic | 45.0% | |
| AGAAGACAGAGTGACACGTT+TGG | + | chr7.1:2991966-2991985 | MS.gene050880:intron | 45.0% | |
| AGTAAGGGAAAGGAGAGGAT+TGG | - | chr7.1:2991754-2991773 | None:intergenic | 45.0% | |
| ATCAAGGATCATAGCTGTGG+AGG | + | chr7.1:2990312-2990331 | MS.gene050880:CDS | 45.0% | |
| ATCATCTCTGCAATTGCAGC+AGG | - | chr7.1:2993700-2993719 | None:intergenic | 45.0% | |
| ATTCTCTCCTTTGTCCTTGG+CGG | + | chr7.1:2993197-2993216 | MS.gene050880:intron | 45.0% | |
| CTACAGGACTTAGCAATGCT+AGG | - | chr7.1:2990484-2990503 | None:intergenic | 45.0% | |
| CTCATTCTCTCCTTTGTCCT+TGG | + | chr7.1:2993194-2993213 | MS.gene050880:intron | 45.0% | |
| CTTCCAGAAAACGAATGGAG+GGG | - | chr7.1:2992833-2992852 | None:intergenic | 45.0% | |
| CTTGCCTTGTACTGAGAGTT+GGG | + | chr7.1:2991721-2991740 | MS.gene050880:intron | 45.0% | |
| CTTGGTGGAGATTTGTGTGT+AGG | - | chr7.1:2989750-2989769 | None:intergenic | 45.0% | |
| GAAGACAGAGTGACACGTTT+GGG | + | chr7.1:2991967-2991986 | MS.gene050880:intron | 45.0% | |
| GAGATCAAGGATCATAGCTG+TGG | + | chr7.1:2990309-2990328 | MS.gene050880:CDS | 45.0% | |
| GATGAGTTCGACCAGTAAGA+AGG | - | chr7.1:2992449-2992468 | None:intergenic | 45.0% | |
| GCAGCTTCTCCTTTACCAAT+TGG | + | chr7.1:2991468-2991487 | MS.gene050880:CDS | 45.0% | |
| GCCACTAATACCATGAACCA+TGG | - | chr7.1:2991674-2991693 | None:intergenic | 45.0% | |
| GGAGATTTGTGTGTAGGACA+TGG | - | chr7.1:2989744-2989763 | None:intergenic | 45.0% | |
| GGGTATAGACACAACACGTT+TGG | - | chr7.1:2993044-2993063 | None:intergenic | 45.0% | |
| GTAAGGGAAAGGAGAGGATT+GGG | - | chr7.1:2991753-2991772 | None:intergenic | 45.0% | |
| GTAGCTTACTGTTTCGCTGA+TGG | - | chr7.1:2989700-2989719 | None:intergenic | 45.0% | |
| TAGAAAAAAGGGCCGAGTGA+TGG | - | chr7.1:2993229-2993248 | None:intergenic | 45.0% | |
| TAGGTTTGATGCTCAGTAGG+TGG | + | chr7.1:2990626-2990645 | MS.gene050880:intron | 45.0% | |
| TCTTACTGGTCGAACTCATC+AGG | + | chr7.1:2992449-2992468 | MS.gene050880:CDS | 45.0% | |
| TCTTGCCTTGTACTGAGAGT+TGG | + | chr7.1:2991720-2991739 | MS.gene050880:intron | 45.0% | |
| TGAACAACAATAGCTGGCCA+GGG | - | chr7.1:2992360-2992379 | None:intergenic | 45.0% | |
| TGAAGGCCAATTGCAACACT+AGG | - | chr7.1:2993826-2993845 | None:intergenic | 45.0% | |
| TGCTCTGCAGAGTTGCTAAA+AGG | + | chr7.1:2992222-2992241 | MS.gene050880:intron | 45.0% | |
| TGGAATGCAGAAAGATTCCC+TGG | + | chr7.1:2992340-2992359 | MS.gene050880:CDS | 45.0% | |
| TTCCAGAAAACGAATGGAGG+GGG | - | chr7.1:2992832-2992851 | None:intergenic | 45.0% | |
| TTCTGAGTAAGGGAAAGGAG+AGG | - | chr7.1:2991759-2991778 | None:intergenic | 45.0% | |
| TTGAACAACAATAGCTGGCC+AGG | - | chr7.1:2992361-2992380 | None:intergenic | 45.0% | |
| TTGTACTGAGAGTTGGGCTT+TGG | + | chr7.1:2991727-2991746 | MS.gene050880:intron | 45.0% | |
| ! | CACTTAGTTGTTTCACGAGG+AGG | + | chr7.1:2989777-2989796 | MS.gene050880:CDS | 45.0% |
| ! | GATTCTCTCCGGTGTCAATT+TGG | + | chr7.1:2991217-2991236 | MS.gene050880:intron | 45.0% |
| ! | GCTTGCAAGGCACCAATAAT+TGG | + | chr7.1:2993658-2993677 | MS.gene050880:CDS | 45.0% |
| ! | TGAACATCAGAAGCGTGTTC+CGG | + | chr7.1:2993270-2993289 | MS.gene050880:intron | 45.0% |
| ! | TGGCTACCCCATTTTGTTGA+GGG | - | chr7.1:2993065-2993084 | None:intergenic | 45.0% |
| ! | TTGGCTACCCCATTTTGTTG+AGG | - | chr7.1:2993066-2993085 | None:intergenic | 45.0% |
| !! | AGCTCAATTTGCTGCTTGCA+AGG | + | chr7.1:2993645-2993664 | MS.gene050880:CDS | 45.0% |
| !! | CAAAAAAGAGCGTCCCTCAA+AGG | + | chr7.1:2990067-2990086 | MS.gene050880:CDS | 45.0% |
| !! | GCTCCTCGACTTATTTCTGA+AGG | + | chr7.1:2991525-2991544 | MS.gene050880:CDS | 45.0% |
| !! | TGGCCGGATTGATTTTGGAT+AGG | + | chr7.1:2993309-2993328 | MS.gene050880:intron | 45.0% |
| !! | TGTGTAGCGTAGTATTGGCT+AGG | + | chr7.1:2991023-2991042 | MS.gene050880:intron | 45.0% |
| !! | TTTACAGAGCTGGTTTGCCT+TGG | + | chr7.1:2993881-2993900 | MS.gene050880:CDS | 45.0% |
| AACCTTTGCAACTCGTGCCT+TGG | + | chr7.1:2990882-2990901 | MS.gene050880:CDS | 50.0% | |
| ACCTTTGCAACTCGTGCCTT+GGG | + | chr7.1:2990883-2990902 | MS.gene050880:CDS | 50.0% | |
| ACGCTTCTGATGTTCAGGCA+TGG | - | chr7.1:2993266-2993285 | None:intergenic | 50.0% | |
| AGCAAAGGCAGCTGGTAAAC+AGG | - | chr7.1:2992676-2992695 | None:intergenic | 50.0% | |
| AGGAGCAACTCCATGGTTCA+TGG | + | chr7.1:2991661-2991680 | MS.gene050880:intron | 50.0% | |
| ATTTGCTCTGCAGTAGCGGT+TGG | - | chr7.1:2990010-2990029 | None:intergenic | 50.0% | |
| CAAAGGGGTTGTCAATCCCA+AGG | - | chr7.1:2990902-2990921 | None:intergenic | 50.0% | |
| CGCTTCTGATGTTCAGGCAT+GGG | - | chr7.1:2993265-2993284 | None:intergenic | 50.0% | |
| CTGCAGATGGTATCAAGGGA+TGG | + | chr7.1:2992295-2992314 | MS.gene050880:intron | 50.0% | |
| CTGTTCTAACCCACCTGAGT+TGG | + | chr7.1:2991138-2991157 | MS.gene050880:intron | 50.0% | |
| GAATCGAACCTGAGACCTTG+CGG | - | chr7.1:2991202-2991221 | None:intergenic | 50.0% | |
| GGAACACGCTTCTGATGTTC+AGG | - | chr7.1:2993271-2993290 | None:intergenic | 50.0% | |
| GGTTAGGTAGGGGAAACTAC+CGG | + | chr7.1:2990838-2990857 | MS.gene050880:intron | 50.0% | |
| GTCTCAGGTTCGATTCTCTC+CGG | + | chr7.1:2991206-2991225 | MS.gene050880:intron | 50.0% | |
| GTTAGGCGCATTAGCCAAGA+TGG | + | chr7.1:2992057-2992076 | MS.gene050880:intron | 50.0% | |
| GTTCAGGCATGGGCGTAAAA+GGG | - | chr7.1:2993255-2993274 | None:intergenic | 50.0% | |
| TCCAGAAAACGAATGGAGGG+GGG | - | chr7.1:2992831-2992850 | None:intergenic | 50.0% | |
| TGTTCAGGCATGGGCGTAAA+AGG | - | chr7.1:2993256-2993275 | None:intergenic | 50.0% | |
| TGTTCCGGGTGGTCCAATAA+CGG | + | chr7.1:2993285-2993304 | MS.gene050880:intron | 50.0% | |
| ! | GAACATCAGAAGCGTGTTCC+GGG | + | chr7.1:2993271-2993290 | MS.gene050880:intron | 50.0% |
| ! | GGCTACCCCATTTTGTTGAG+GGG | - | chr7.1:2993064-2993083 | None:intergenic | 50.0% |
| ! | TTGATAACTGCACGGAAGGC+TGG | + | chr7.1:2990938-2990957 | MS.gene050880:CDS | 50.0% |
| !! | ATTGATAGGCGTTGGGGTCA+AGG | + | chr7.1:2990530-2990549 | MS.gene050880:intron | 50.0% |
| !! | GTGGTATTGGCTTGGGTCTT+GGG | + | chr7.1:2991165-2991184 | MS.gene050880:intron | 50.0% |
| AGACCCAAGCCAATACCACC+AGG | - | chr7.1:2991164-2991183 | None:intergenic | 55.0% | |
| AGTCGAGGAGCCGTGTTAGT+AGG | - | chr7.1:2991516-2991535 | None:intergenic | 55.0% | |
| CAATACCACCAGGCCAACTC+AGG | - | chr7.1:2991154-2991173 | None:intergenic | 55.0% | |
| CCAGAAAACGAATGGAGGGG+GGG | - | chr7.1:2992830-2992849 | None:intergenic | 55.0% | |
| GCTTCACTAGCAAAGGCAGC+TGG | - | chr7.1:2992684-2992703 | None:intergenic | 55.0% | |
| GTTCCGGGTGGTCCAATAAC+GGG | + | chr7.1:2993286-2993305 | MS.gene050880:intron | 55.0% | |
| TCAATCCGGCCACCCGTTAT+TGG | - | chr7.1:2993301-2993320 | None:intergenic | 55.0% | |
| TCCCAAGGCACGAGTTGCAA+AGG | - | chr7.1:2990887-2990906 | None:intergenic | 55.0% | |
| TCTAGGGAGGAGCAACTCCA+TGG | + | chr7.1:2991654-2991673 | MS.gene050880:intron | 55.0% | |
| TGCACCCCAAGCGTTATCCT+AGG | + | chr7.1:2990176-2990195 | MS.gene050880:CDS | 55.0% | |
| TGCACTCGCAGGTAAGTTCC+TGG | - | chr7.1:2990154-2990173 | None:intergenic | 55.0% | |
| ! | CTGAGTTGGCCTGGTGGTAT+TGG | + | chr7.1:2991152-2991171 | MS.gene050880:intron | 55.0% |
| !! | AAAGGGCCGAGTGATGGACT+TGG | - | chr7.1:2993223-2993242 | None:intergenic | 55.0% |
| !! | ACAGAGCTGGTTTGCCTTGG+TGG | + | chr7.1:2993884-2993903 | MS.gene050880:CDS | 55.0% |
| !! | ACGGGTGGCCGGATTGATTT+TGG | + | chr7.1:2993304-2993323 | MS.gene050880:intron | 55.0% |
| !! | GGTGGTATTGGCTTGGGTCT+TGG | + | chr7.1:2991164-2991183 | MS.gene050880:intron | 55.0% |
| !! | TGGCCTGGTGGTATTGGCTT+GGG | + | chr7.1:2991158-2991177 | MS.gene050880:intron | 55.0% |
| !! | TTGGCCTGGTGGTATTGGCT+TGG | + | chr7.1:2991157-2991176 | MS.gene050880:intron | 55.0% |
| ACCACCAGGCCAACTCAGGT+GGG | - | chr7.1:2991150-2991169 | None:intergenic | 60.0% | |
| CAGCTGCCGCGGAACAAGAT+TGG | - | chr7.1:2989567-2989586 | None:intergenic | 60.0% | |
| CCACCCGTTATTGGACCACC+CGG | - | chr7.1:2993292-2993311 | None:intergenic | 60.0% | |
| GACTTGGCCGCCAAGGACAA+AGG | - | chr7.1:2993207-2993226 | None:intergenic | 60.0% | |
| GTAGCGGTTGGAGGAGGTTC+CGG | - | chr7.1:2989998-2990017 | None:intergenic | 60.0% | |
| GTGGCGCCAATCTTGTTCCG+CGG | + | chr7.1:2989558-2989577 | MS.gene050880:CDS | 60.0% | |
| TACCACCAGGCCAACTCAGG+TGG | - | chr7.1:2991151-2991170 | None:intergenic | 60.0% | |
| TCGAACCTGAGACCTTGCGG+AGG | - | chr7.1:2991199-2991218 | None:intergenic | 60.0% | |
| TCTGCAGTAGCGGTTGGAGG+AGG | - | chr7.1:2990004-2990023 | None:intergenic | 60.0% | |
| TGCTCTGCAGTAGCGGTTGG+AGG | - | chr7.1:2990007-2990026 | None:intergenic | 60.0% | |
| TGGCGGCCAAGTCCATCACT+CGG | + | chr7.1:2993214-2993233 | MS.gene050880:intron | 60.0% | |
| ! | CATCAGAAGCGTGTTCCGGG+TGG | + | chr7.1:2993274-2993293 | MS.gene050880:intron | 60.0% |
| ! | CCCCCCCTCCATTCGTTTTC+TGG | + | chr7.1:2992827-2992846 | MS.gene050880:intron | 60.0% |
| ! | CTAACCCACCTGAGTTGGCC+TGG | + | chr7.1:2991143-2991162 | MS.gene050880:intron | 60.0% |
| !! | AGTGATGGACTTGGCCGCCA+AGG | - | chr7.1:2993214-2993233 | None:intergenic | 60.0% |
| !! | GAGCTGGTTTGCCTTGGTGG+AGG | + | chr7.1:2993887-2993906 | MS.gene050880:CDS | 60.0% |
| !! | GTGGTCCAATAACGGGTGGC+CGG | + | chr7.1:2993293-2993312 | MS.gene050880:intron | 60.0% |
| CTGTCGTAGCCTCGGCGTTC+CGG | + | chr7.1:2989584-2989603 | MS.gene050880:CDS | 65.0% | |
| GTGCTCCTCCGCAAGGTCTC+AGG | + | chr7.1:2991191-2991210 | MS.gene050880:intron | 65.0% | |
| TAGCCTCGGCGTTCCGGATG+CGG | + | chr7.1:2989590-2989609 | MS.gene050880:CDS | 65.0% | |
| ! | ACCCACCTGAGTTGGCCTGG+TGG | + | chr7.1:2991146-2991165 | MS.gene050880:intron | 65.0% |
| ! | CCGGGTGGTCCAATAACGGG+TGG | + | chr7.1:2993289-2993308 | MS.gene050880:intron | 65.0% |
| ! | TGGGAGTGTGCTCCTCCGCA+AGG | + | chr7.1:2991184-2991203 | MS.gene050880:intron | 65.0% |
| CGAGGCTACGACAGCTGCCG+CGG | - | chr7.1:2989578-2989597 | None:intergenic | 70.0% | |
| CGCGGCAGCTGTCGTAGCCT+CGG | + | chr7.1:2989576-2989595 | MS.gene050880:CDS | 70.0% | |
| CGTTCCGGATGCGGCGAGTG+CGG | + | chr7.1:2989599-2989618 | MS.gene050880:CDS | 70.0% | |
| GGAACCGCACTCGCCGCATC+CGG | - | chr7.1:2989606-2989625 | None:intergenic | 70.0% | |
| TGGGGTGCACGTGCACTCGC+AGG | - | chr7.1:2990165-2990184 | None:intergenic | 70.0% | |
| TCGCCGCATCCGGAACGCCG+AGG | - | chr7.1:2989596-2989615 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 2989543 | 2993915 | 2989543 | ID=MS.gene050880 |
| chr7.1 | mRNA | 2989543 | 2993915 | 2989543 | ID=MS.gene050880.t1;Parent=MS.gene050880 |
| chr7.1 | exon | 2989543 | 2989844 | 2989543 | ID=MS.gene050880.t1.exon1;Parent=MS.gene050880.t1 |
| chr7.1 | CDS | 2989543 | 2989844 | 2989543 | ID=cds.MS.gene050880.t1;Parent=MS.gene050880.t1 |
| chr7.1 | exon | 2989943 | 2990197 | 2989943 | ID=MS.gene050880.t1.exon2;Parent=MS.gene050880.t1 |
| chr7.1 | CDS | 2989943 | 2990197 | 2989943 | ID=cds.MS.gene050880.t1;Parent=MS.gene050880.t1 |
| chr7.1 | exon | 2990291 | 2990372 | 2990291 | ID=MS.gene050880.t1.exon3;Parent=MS.gene050880.t1 |
| chr7.1 | CDS | 2990291 | 2990372 | 2990291 | ID=cds.MS.gene050880.t1;Parent=MS.gene050880.t1 |
| chr7.1 | exon | 2990844 | 2990959 | 2990844 | ID=MS.gene050880.t1.exon4;Parent=MS.gene050880.t1 |
| chr7.1 | CDS | 2990844 | 2990959 | 2990844 | ID=cds.MS.gene050880.t1;Parent=MS.gene050880.t1 |
| chr7.1 | exon | 2991030 | 2991084 | 2991030 | ID=MS.gene050880.t1.exon5;Parent=MS.gene050880.t1 |
| chr7.1 | CDS | 2991030 | 2991084 | 2991030 | ID=cds.MS.gene050880.t1;Parent=MS.gene050880.t1 |
| chr7.1 | exon | 2991435 | 2991546 | 2991435 | ID=MS.gene050880.t1.exon6;Parent=MS.gene050880.t1 |
| chr7.1 | CDS | 2991435 | 2991546 | 2991435 | ID=cds.MS.gene050880.t1;Parent=MS.gene050880.t1 |
| chr7.1 | exon | 2992301 | 2992470 | 2992301 | ID=MS.gene050880.t1.exon7;Parent=MS.gene050880.t1 |
| chr7.1 | CDS | 2992301 | 2992470 | 2992301 | ID=cds.MS.gene050880.t1;Parent=MS.gene050880.t1 |
| chr7.1 | exon | 2993640 | 2993915 | 2993640 | ID=MS.gene050880.t1.exon8;Parent=MS.gene050880.t1 |
| chr7.1 | CDS | 2993640 | 2993915 | 2993640 | ID=cds.MS.gene050880.t1;Parent=MS.gene050880.t1 |
| Gene Sequence |
| Protein sequence |
