Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072473.t1 | RHN49279.1 | 93.6 | 450 | 25 | 1 | 4 | 453 | 2 | 447 | 3.20E-252 | 880.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072473.t1 | Q9SVS0 | 67.0 | 415 | 131 | 4 | 46 | 454 | 58 | 472 | 2.2e-169 | 596.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072473.t1 | A0A396H7P7 | 93.6 | 450 | 25 | 1 | 4 | 453 | 2 | 447 | 2.3e-252 | 880.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049351 | MS.gene072473 | 0.820093 | 8.23E-53 | -1.69E-46 |
| MS.gene050880 | MS.gene072473 | 0.810404 | 1.17E-50 | -1.69E-46 |
| MS.gene053322 | MS.gene072473 | 0.800595 | 1.34E-48 | -1.69E-46 |
| MS.gene054802 | MS.gene072473 | 0.80789 | 4.05E-50 | -1.69E-46 |
| MS.gene054803 | MS.gene072473 | 0.805624 | 1.22E-49 | -1.69E-46 |
| MS.gene054804 | MS.gene072473 | 0.806509 | 7.95E-50 | -1.69E-46 |
| MS.gene055412 | MS.gene072473 | 0.802363 | 5.81E-49 | -1.69E-46 |
| MS.gene057011 | MS.gene072473 | 0.818229 | 2.19E-52 | -1.69E-46 |
| MS.gene058993 | MS.gene072473 | 0.801124 | 1.04E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072473.t1 | MTR_7g113450 | 93.333 | 450 | 26 | 1 | 4 | 453 | 2 | 447 | 0.0 | 872 |
| MS.gene072473.t1 | MTR_2g022770 | 81.184 | 473 | 71 | 2 | 1 | 455 | 1 | 473 | 0.0 | 796 |
| MS.gene072473.t1 | MTR_7g113450 | 93.092 | 304 | 21 | 0 | 4 | 307 | 2 | 305 | 0.0 | 588 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072473.t1 | AT4G21770 | 66.747 | 415 | 132 | 4 | 46 | 454 | 58 | 472 | 0.0 | 594 |
| MS.gene072473.t1 | AT4G21770 | 68.702 | 393 | 119 | 3 | 66 | 454 | 1 | 393 | 0.0 | 579 |
Find 109 sgRNAs with CRISPR-Local
Find 304 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACCTCAACAAGCATGAATT+TGG | 0.218911 | 7.3:+3548414 | MS.gene072473:CDS |
| AAGAAACGGCTGTAATAAAT+TGG | 0.246669 | 7.3:+3552559 | MS.gene072473:CDS |
| CCGTCTTTCATTGCAAAATT+CGG | 0.253470 | 7.3:+3549833 | MS.gene072473:CDS |
| GTTGCAGATCTGATTCAATT+TGG | 0.281393 | 7.3:+3548719 | MS.gene072473:CDS |
| ACAACTAAGTGTTCAATTCT+TGG | 0.294603 | 7.3:-3548537 | None:intergenic |
| CTGTCGTAGCCTCGGCGTTC+CGG | 0.315206 | 7.3:+3548356 | MS.gene072473:CDS |
| TTCAAGCTTGTCAAATTTCA+TGG | 0.315468 | 7.3:+3552622 | MS.gene072473:CDS |
| TGTAAAATCAACCTTCTTAC+TGG | 0.321032 | 7.3:+3551215 | MS.gene072473:CDS |
| CGTCTTTCATTGCAAAATTC+GGG | 0.339193 | 7.3:+3549834 | MS.gene072473:CDS |
| TACATAGTATCACCAATTAT+TGG | 0.340825 | 7.3:-3552450 | None:intergenic |
| CCGTGCAGTTATCAATTTGA+TGG | 0.341065 | 7.3:-3549701 | None:intergenic |
| ACCTTTGCAACTCGTGCCTT+GGG | 0.344438 | 7.3:+3549654 | MS.gene072473:CDS |
| ACAATACATCTGTAAAGCTT+TGG | 0.353276 | 7.3:+3548581 | MS.gene072473:CDS |
| GAGGTGTTTGTTAAGTGATA+TGG | 0.358711 | 7.3:-3548397 | None:intergenic |
| GCTTGCAAGGCACCAATAAT+TGG | 0.358878 | 7.3:+3552438 | MS.gene072473:CDS |
| AATCCTGGACTTAATCCATT+TGG | 0.359578 | 7.3:+3552501 | MS.gene072473:CDS |
| ACAGAGCTGGTTTGCCTTGG+TGG | 0.361729 | 7.3:+3552664 | MS.gene072473:CDS |
| GTAGCGGTTGGAGGAGGTTC+CGG | 0.372880 | 7.3:-3548767 | None:intergenic |
| ATGAAATTTGACAAGCTTGA+AGG | 0.384279 | 7.3:-3552620 | None:intergenic |
| AACCTTTGCAACTCGTGCCT+TGG | 0.385948 | 7.3:+3549653 | MS.gene072473:CDS |
| TTACAGATGTATTGTAAAAC+AGG | 0.388608 | 7.3:-3548573 | None:intergenic |
| ACAACTTTCTTCAATGTTGC+CGG | 0.392445 | 7.3:-3549628 | None:intergenic |
| GCAGCTTCTCCTTTACCAAT+TGG | 0.403389 | 7.3:+3550239 | MS.gene072473:CDS |
| CAGCTGCCGCGGAACAAGAT+TGG | 0.406189 | 7.3:-3548336 | None:intergenic |
| TGCACTCGCAGGTAAGTTCC+TGG | 0.426326 | 7.3:-3548923 | None:intergenic |
| CAAAGAAGCAACTGAACCAT+TGG | 0.428367 | 7.3:+3548811 | MS.gene072473:CDS |
| ATTTACCTAGGATAACGCTT+GGG | 0.431357 | 7.3:-3548953 | None:intergenic |
| AGTCGAGGAGCCGTGTTAGT+AGG | 0.435108 | 7.3:-3550284 | None:intergenic |
| TTGAACAACAATAGCTGGCC+AGG | 0.441571 | 7.3:-3551138 | None:intergenic |
| AGGTGTTTGTTAAGTGATAT+GGG | 0.442132 | 7.3:-3548396 | None:intergenic |
| ATGAATTTGGTTGGTGTTGT+CGG | 0.448484 | 7.3:+3548427 | MS.gene072473:CDS |
| GAAGCAATCGATCATACTTC+GGG | 0.456347 | 7.3:-3548491 | None:intergenic |
| CGCGGCAGCTGTCGTAGCCT+CGG | 0.459951 | 7.3:+3548348 | MS.gene072473:CDS |
| TTTACAGAGCTGGTTTGCCT+TGG | 0.460289 | 7.3:+3552661 | MS.gene072473:CDS |
| AATATTGTGTTGAAGATTGT+GGG | 0.461791 | 7.3:+3551165 | MS.gene072473:CDS |
| TAGCCTCGGCGTTCCGGATG+CGG | 0.465407 | 7.3:+3548362 | MS.gene072473:CDS |
| AGCTCAATTTGCTGCTTGCA+AGG | 0.465415 | 7.3:+3552425 | MS.gene072473:CDS |
| TTGATAACTGCACGGAAGGC+TGG | 0.465999 | 7.3:+3549709 | MS.gene072473:CDS |
| TTAGGTGCTATGAGATTGAC+TGG | 0.466195 | 7.3:+3549059 | MS.gene072473:intron |
| TTTGATGGGTAGTTATCAAA+GGG | 0.466598 | 7.3:-3549686 | None:intergenic |
| ATTTATGTGTAGCGTAGTAT+TGG | 0.471915 | 7.3:+3549789 | MS.gene072473:intron |
| TCTTACTGGTCGAACTCATC+AGG | 0.474622 | 7.3:+3551229 | MS.gene072473:CDS |
| GGAACCGCACTCGCCGCATC+CGG | 0.475158 | 7.3:-3548375 | None:intergenic |
| ATTTGCTCTGCAGTAGCGGT+TGG | 0.475754 | 7.3:-3548779 | None:intergenic |
| TGCTCTGCAGTAGCGGTTGG+AGG | 0.479465 | 7.3:-3548776 | None:intergenic |
| AAAGAGCCTAGTGTTGCAAT+TGG | 0.490916 | 7.3:+3552597 | MS.gene072473:CDS |
| ATTGACTGCAGATGGTATCA+AGG | 0.491296 | 7.3:+3551070 | MS.gene072473:intron |
| GATGAATACATTTACAGAGC+TGG | 0.491345 | 7.3:+3552651 | MS.gene072473:CDS |
| ATGAGATTGACTGGAGATCA+AGG | 0.491460 | 7.3:+3549068 | MS.gene072473:CDS |
| TTTCCAAATGGATTAAGTCC+AGG | 0.503496 | 7.3:-3552504 | None:intergenic |
| TAGTGCTTAATGATTCCAAT+TGG | 0.508620 | 7.3:-3550254 | None:intergenic |
| TCATCTTGAACAACAATAGC+TGG | 0.509716 | 7.3:-3551143 | None:intergenic |
| TATTTGTCATCTTGAGGTCA+TGG | 0.513587 | 7.3:+3551100 | MS.gene072473:CDS |
| TAAGATGGGTTCGGTGGCGG+TGG | 0.514367 | 7.3:+3548311 | None:intergenic |
| ATCATCTCTGCAATTGCAGC+AGG | 0.520543 | 7.3:-3552477 | None:intergenic |
| ATTTGATGGGTAGTTATCAA+AGG | 0.524439 | 7.3:-3549687 | None:intergenic |
| CGTGCAGTTATCAATTTGAT+GGG | 0.526284 | 7.3:-3549700 | None:intergenic |
| AGTAAAAGATAAGATGGGTT+CGG | 0.528067 | 7.3:+3548302 | None:intergenic |
| TCAAGCTTGTCAAATTTCAT+GGG | 0.528140 | 7.3:+3552623 | MS.gene072473:CDS |
| CTTGGCGGAGATTTGTGTGT+AGG | 0.530094 | 7.3:-3548519 | None:intergenic |
| TTAATGATTCCAATTGGTAA+AGG | 0.533290 | 7.3:-3550248 | None:intergenic |
| GGAAGCAATCGATCATACTT+CGG | 0.533740 | 7.3:-3548492 | None:intergenic |
| ATTGCAGAGATGATTAATCC+TGG | 0.537124 | 7.3:+3552486 | MS.gene072473:CDS |
| TCTGCAGTAGCGGTTGGAGG+AGG | 0.537831 | 7.3:-3548773 | None:intergenic |
| GAGCTGGTTTGCCTTGGTGG+AGG | 0.539193 | 7.3:+3552667 | MS.gene072473:CDS |
| GTAGCTTACTGTTTCACTGA+TGG | 0.541763 | 7.3:-3548469 | None:intergenic |
| GAATATTGTGTTGAAGATTG+TGG | 0.542188 | 7.3:+3551164 | MS.gene072473:CDS |
| TCTAATTTGCTCTGCAGTAG+CGG | 0.543133 | 7.3:-3548783 | None:intergenic |
| TGGAATGTAGAAAGATTCCC+TGG | 0.544213 | 7.3:+3551120 | MS.gene072473:CDS |
| AGATAAGATGGGTTCGGTGG+CGG | 0.545265 | 7.3:+3548308 | None:intergenic |
| TGGGGTGCACGTGCACTCGC+AGG | 0.546368 | 7.3:-3548934 | None:intergenic |
| GAATTTGGCACTTACAAATG+AGG | 0.550102 | 7.3:-3548609 | None:intergenic |
| TGTGTAGCGTAGTATTGGCT+AGG | 0.552185 | 7.3:+3549794 | MS.gene072473:intron |
| AATTTACCTAGGATAACGCT+TGG | 0.552883 | 7.3:-3548954 | None:intergenic |
| CAAATTGATAACTGCACGGA+AGG | 0.558184 | 7.3:+3549705 | MS.gene072473:CDS |
| CGAGGCTACGACAGCTGCCG+CGG | 0.558845 | 7.3:-3548347 | None:intergenic |
| CGTTCCGGATGCGGCGAGTG+CGG | 0.562174 | 7.3:+3548371 | MS.gene072473:CDS |
| CACTTAGTTGTTTCACGAGG+AGG | 0.563811 | 7.3:+3548549 | MS.gene072473:CDS |
| ACTAAGTGTTCAATTCTTGG+CGG | 0.566453 | 7.3:-3548534 | None:intergenic |
| TCCCAAGGCACGAGTTGCAA+AGG | 0.567562 | 7.3:-3549655 | None:intergenic |
| TGAAGGCCAATTGCAACACT+AGG | 0.568515 | 7.3:-3552603 | None:intergenic |
| AACCAAATTCATGCTTGTTG+AGG | 0.571349 | 7.3:-3548416 | None:intergenic |
| ATGGCATATTTGTCATCTTG+AGG | 0.572439 | 7.3:+3551094 | MS.gene072473:CDS |
| TCAACAAGCATGAATTTGGT+TGG | 0.576730 | 7.3:+3548418 | MS.gene072473:CDS |
| TTGACTGCAGATGGTATCAA+GGG | 0.577829 | 7.3:+3551071 | MS.gene072473:intron |
| GATGAGTTCGACCAGTAAGA+AGG | 0.590412 | 7.3:-3551226 | None:intergenic |
| TTACATACAGAAGTACCAGC+AGG | 0.592818 | 7.3:-3549130 | None:intergenic |
| GTGAATCAGTTTGTTGAACC+AGG | 0.597573 | 7.3:+3548905 | MS.gene072473:CDS |
| GCTCCTCGACTTATTTCTGA+AGG | 0.598052 | 7.3:+3550296 | MS.gene072473:CDS |
| CTGCAGATGGTATCAAGGGA+TGG | 0.598332 | 7.3:+3551075 | MS.gene072473:intron |
| TGCACCCCAAGCGTTATCCT+AGG | 0.608599 | 7.3:+3548948 | MS.gene072473:CDS |
| CTATATGCGTCCTACTAACA+CGG | 0.608861 | 7.3:+3550274 | MS.gene072473:CDS |
| GGTTAGGTAGGGGAAACTAC+CGG | 0.618843 | 7.3:+3549609 | MS.gene072473:intron |
| TGAACAACAATAGCTGGCCA+GGG | 0.627097 | 7.3:-3551137 | None:intergenic |
| CAAAGGGGTTGTCAATCCCA+AGG | 0.627297 | 7.3:-3549670 | None:intergenic |
| GTGGCGCCAATCTTGTTCCG+CGG | 0.631844 | 7.3:+3548330 | MS.gene072473:CDS |
| TTTACCTAGGATAACGCTTG+GGG | 0.635968 | 7.3:-3548952 | None:intergenic |
| GAGATCAAGGATCATAGCTG+TGG | 0.639469 | 7.3:+3549081 | MS.gene072473:CDS |
| ATCAAGGATCATAGCTGTGG+AGG | 0.645787 | 7.3:+3549084 | MS.gene072473:CDS |
| TCGCCGCATCCGGAACGCCG+AGG | 0.647925 | 7.3:-3548365 | None:intergenic |
| CCATCAAATTGATAACTGCA+CGG | 0.652336 | 7.3:+3549701 | MS.gene072473:CDS |
| AAAAGATAAGATGGGTTCGG+TGG | 0.652380 | 7.3:+3548305 | None:intergenic |
| ACTGATTCACATCAGTTACA+CGG | 0.683807 | 7.3:-3548892 | None:intergenic |
| GGAGATTTGTGTGTAGGACA+TGG | 0.688633 | 7.3:-3548513 | None:intergenic |
| ATAAATTGGATTGCACAACA+CGG | 0.689490 | 7.3:+3552573 | MS.gene072473:CDS |
| TTGATGGGTAGTTATCAAAG+GGG | 0.694436 | 7.3:-3549685 | None:intergenic |
| TTACCTTCAGAAATAAGTCG+AGG | 0.695194 | 7.3:-3550299 | None:intergenic |
| ATTGTGTTGAAGATTGTGGG+TGG | 0.705277 | 7.3:+3551168 | MS.gene072473:CDS |
| GAACACTTAGTTGTTTCACG+AGG | 0.728290 | 7.3:+3548546 | MS.gene072473:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGATTAAATAAAATTTGAAT+AGG | + | chr7.3:3550890-3550909 | MS.gene072473:intron | 10.0% |
| !! | ATAATCAGATAAAAGAAATA+AGG | - | chr7.3:3552360-3552379 | None:intergenic | 15.0% |
| !!! | AATGTATTCTTTTCTATATT+TGG | + | chr7.3:3549588-3549607 | MS.gene072473:intron | 15.0% |
| !!! | CACTTAATTATTTTTTTTTC+AGG | + | chr7.3:3550184-3550203 | MS.gene072473:intron | 15.0% |
| !!! | TCAAATATTATAAGTTGATT+AGG | - | chr7.3:3550873-3550892 | None:intergenic | 15.0% |
| !!! | TGGTATTTTTAATGAAAAAT+AGG | + | chr7.3:3551646-3551665 | MS.gene072473:intron | 15.0% |
| !!! | TTTAAAGTTTAACTTTACAA+TGG | - | chr7.3:3550973-3550992 | None:intergenic | 15.0% |
| !! | AAATTCAAACAGTACATAAA+AGG | - | chr7.3:3551267-3551286 | None:intergenic | 20.0% |
| !! | AGCATTTACATGATATATAT+AGG | + | chr7.3:3552180-3552199 | MS.gene072473:intron | 20.0% |
| !! | ATATATAGGAGATACTATAT+AGG | + | chr7.3:3552194-3552213 | MS.gene072473:intron | 20.0% |
| !! | ATTTAAGTCACTATATCAAT+AGG | - | chr7.3:3552390-3552409 | None:intergenic | 20.0% |
| !! | CTTATCATATCATGTAAATA+GGG | - | chr7.3:3552261-3552280 | None:intergenic | 20.0% |
| !! | TACAACTAACTTAACTATAA+TGG | - | chr7.3:3550576-3550595 | None:intergenic | 20.0% |
| !! | TTTAACCATATGATTTAGTT+AGG | + | chr7.3:3550820-3550839 | MS.gene072473:intron | 20.0% |
| !! | TTTAAGTCACTATATCAATA+GGG | - | chr7.3:3552389-3552408 | None:intergenic | 20.0% |
| !!! | AAATATAGCTCAATTTTAGA+TGG | - | chr7.3:3551548-3551567 | None:intergenic | 20.0% |
| !!! | ATTCTTTTCTATATTTGGTT+AGG | + | chr7.3:3549593-3549612 | MS.gene072473:intron | 20.0% |
| !!! | CATAATGTTTTGAAATTTGT+GGG | - | chr7.3:3551781-3551800 | None:intergenic | 20.0% |
| !!! | GGCATTCTTAATATATTTTT+AGG | + | chr7.3:3549041-3549060 | MS.gene072473:intron | 20.0% |
| !!! | TAAAAGGGTATTAGAAAAAA+GGG | - | chr7.3:3552020-3552039 | None:intergenic | 20.0% |
| !!! | TACTTCACTATTTCATTTTA+AGG | - | chr7.3:3550364-3550383 | None:intergenic | 20.0% |
| !!! | TATTTCATTTTAAGGTTCTT+GGG | - | chr7.3:3550356-3550375 | None:intergenic | 20.0% |
| !!! | TCTTTATTGTATTTTCCAAA+TGG | - | chr7.3:3552519-3552538 | None:intergenic | 20.0% |
| !!! | TGATTGATAATTCTTATCTT+CGG | + | chr7.3:3551358-3551377 | MS.gene072473:intron | 20.0% |
| !!! | TTTAGTTTTATACTACATGA+AGG | + | chr7.3:3550777-3550796 | MS.gene072473:intron | 20.0% |
| ! | AAAAACCATTATGCTTGATA+AGG | - | chr7.3:3549329-3549348 | None:intergenic | 25.0% |
| ! | AAAGTTATTTATCCCTGTAT+AGG | + | chr7.3:3549178-3549197 | MS.gene072473:intron | 25.0% |
| ! | AATATTGTGTTGAAGATTGT+GGG | + | chr7.3:3551165-3551184 | MS.gene072473:CDS | 25.0% |
| ! | ACTAACATTCTAATTTACCT+AGG | - | chr7.3:3548968-3548987 | None:intergenic | 25.0% |
| ! | AGGTAAATTAGAATGTTAGT+TGG | + | chr7.3:3548968-3548987 | MS.gene072473:intron | 25.0% |
| ! | ATAGAAAAGAATACATTGCA+CGG | - | chr7.3:3549585-3549604 | None:intergenic | 25.0% |
| ! | ATGTATTATAAGCAACTTCT+AGG | + | chr7.3:3550408-3550427 | MS.gene072473:intron | 25.0% |
| ! | ATTCTATAAGAATCCTATAC+AGG | - | chr7.3:3549194-3549213 | None:intergenic | 25.0% |
| ! | ATTTGTGGGATAAATATTCT+CGG | - | chr7.3:3551767-3551786 | None:intergenic | 25.0% |
| ! | CACTTCTTGAAAAGAATAAA+AGG | + | chr7.3:3550701-3550720 | MS.gene072473:intron | 25.0% |
| ! | GCTTATCATATCATGTAAAT+AGG | - | chr7.3:3552262-3552281 | None:intergenic | 25.0% |
| ! | TAACAGTATAAGCTATGAAA+TGG | - | chr7.3:3549871-3549890 | None:intergenic | 25.0% |
| ! | TACATAGTATCACCAATTAT+TGG | - | chr7.3:3552453-3552472 | None:intergenic | 25.0% |
| ! | TCAAGAAGTGGAATATTTAA+AGG | - | chr7.3:3550691-3550710 | None:intergenic | 25.0% |
| ! | TGATAAAAATTGATTACGAG+TGG | - | chr7.3:3548655-3548674 | None:intergenic | 25.0% |
| ! | TGTATTATAAGCAACTTCTA+GGG | + | chr7.3:3550409-3550428 | MS.gene072473:intron | 25.0% |
| ! | TTAATGATTCCAATTGGTAA+AGG | - | chr7.3:3550251-3550270 | None:intergenic | 25.0% |
| ! | TTACAGATGTATTGTAAAAC+AGG | - | chr7.3:3548576-3548595 | None:intergenic | 25.0% |
| ! | TTAGAATGTTAGTTGGAAAT+TGG | + | chr7.3:3548975-3548994 | MS.gene072473:intron | 25.0% |
| ! | TTCTATAAGAATCCTATACA+GGG | - | chr7.3:3549193-3549212 | None:intergenic | 25.0% |
| ! | TTTCTATATTTGGTTAGGTA+GGG | + | chr7.3:3549598-3549617 | MS.gene072473:intron | 25.0% |
| !! | CATGAAATTAAAACCCATTT+TGG | + | chr7.3:3551702-3551721 | MS.gene072473:intron | 25.0% |
| !! | CTTTATAGTTTTTCCTTTGA+GGG | - | chr7.3:3548855-3548874 | None:intergenic | 25.0% |
| !! | GATTGATAATTCTTATCTTC+GGG | + | chr7.3:3551359-3551378 | MS.gene072473:intron | 25.0% |
| !! | TAAAATTCTAGCTAGGAATT+TGG | - | chr7.3:3548627-3548646 | None:intergenic | 25.0% |
| !! | TTTTCTATATTTGGTTAGGT+AGG | + | chr7.3:3549597-3549616 | MS.gene072473:intron | 25.0% |
| !! | TTTTTCTGAGTTCATATAGT+GGG | - | chr7.3:3549161-3549180 | None:intergenic | 25.0% |
| !!! | AATAGAGTTTGTTAGTACAA+CGG | - | chr7.3:3551510-3551529 | None:intergenic | 25.0% |
| !!! | CTATTTCATTTTAAGGTTCT+TGG | - | chr7.3:3550357-3550376 | None:intergenic | 25.0% |
| !!! | CTTTTATTCTTTTCAAGAAG+TGG | - | chr7.3:3550703-3550722 | None:intergenic | 25.0% |
| !!! | GCATAATGTTTTGAAATTTG+TGG | - | chr7.3:3551782-3551801 | None:intergenic | 25.0% |
| !!! | GTAAAAGGGTATTAGAAAAA+AGG | - | chr7.3:3552021-3552040 | None:intergenic | 25.0% |
| AAGAAACGGCTGTAATAAAT+TGG | + | chr7.3:3552559-3552578 | MS.gene072473:CDS | 30.0% | |
| ACAACTAAGTGTTCAATTCT+TGG | - | chr7.3:3548540-3548559 | None:intergenic | 30.0% | |
| ACAATACATCTGTAAAGCTT+TGG | + | chr7.3:3548581-3548600 | MS.gene072473:CDS | 30.0% | |
| ACTAACAAACTCTATTGTTC+TGG | + | chr7.3:3551514-3551533 | MS.gene072473:intron | 30.0% | |
| ATAAACTTCCAGAAAACGAA+TGG | - | chr7.3:3551618-3551637 | None:intergenic | 30.0% | |
| ATAAATTGGATTGCACAACA+CGG | + | chr7.3:3552573-3552592 | MS.gene072473:CDS | 30.0% | |
| ATAACAACATGATGTGTCAA+TGG | + | chr7.3:3550935-3550954 | MS.gene072473:intron | 30.0% | |
| ATACATTGCACGGAAAATTT+AGG | - | chr7.3:3549575-3549594 | None:intergenic | 30.0% | |
| ATATTTAAAGGAGAGAGGAT+AGG | - | chr7.3:3550679-3550698 | None:intergenic | 30.0% | |
| ATCAATGTAGAAATTGCCAT+TGG | - | chr7.3:3549288-3549307 | None:intergenic | 30.0% | |
| ATGAAATTTGACAAGCTTGA+AGG | - | chr7.3:3552623-3552642 | None:intergenic | 30.0% | |
| ATGGCAATTTCTACATTGAT+AGG | + | chr7.3:3549288-3549307 | MS.gene072473:intron | 30.0% | |
| ATTGTCAGAATTCTGAGTAA+GGG | - | chr7.3:3550540-3550559 | None:intergenic | 30.0% | |
| ATTTATGTGTAGCGTAGTAT+TGG | + | chr7.3:3549789-3549808 | MS.gene072473:intron | 30.0% | |
| CACAATATAAGACACTTATC+AGG | - | chr7.3:3551031-3551050 | None:intergenic | 30.0% | |
| CCTCAAAGGAAAAACTATAA+AGG | + | chr7.3:3548853-3548872 | MS.gene072473:CDS | 30.0% | |
| CTGATAAGTGTCTTATATTG+TGG | + | chr7.3:3551029-3551048 | MS.gene072473:intron | 30.0% | |
| CTGCAGTCAATAAATTTACA+GGG | - | chr7.3:3551061-3551080 | None:intergenic | 30.0% | |
| GAATATTGTGTTGAAGATTG+TGG | + | chr7.3:3551164-3551183 | MS.gene072473:CDS | 30.0% | |
| TAACAACATGATGTGTCAAT+GGG | + | chr7.3:3550936-3550955 | MS.gene072473:intron | 30.0% | |
| TAGTGCTTAATGATTCCAAT+TGG | - | chr7.3:3550257-3550276 | None:intergenic | 30.0% | |
| TCAAGCTTGTCAAATTTCAT+GGG | + | chr7.3:3552623-3552642 | MS.gene072473:CDS | 30.0% | |
| TCATGTTGTTATAGTACAAC+AGG | - | chr7.3:3550927-3550946 | None:intergenic | 30.0% | |
| TCTCAAGAATGATTGTTTGT+AGG | + | chr7.3:3549378-3549397 | MS.gene072473:intron | 30.0% | |
| TCTGCAGTCAATAAATTTAC+AGG | - | chr7.3:3551062-3551081 | None:intergenic | 30.0% | |
| TGCCAAACATTATCATATCA+TGG | - | chr7.3:3549025-3549044 | None:intergenic | 30.0% | |
| TGTAAAATCAACCTTCTTAC+TGG | + | chr7.3:3551215-3551234 | MS.gene072473:CDS | 30.0% | |
| TTACTCAGAATTCTGACAAT+CGG | + | chr7.3:3550540-3550559 | MS.gene072473:intron | 30.0% | |
| TTCAAGCTTGTCAAATTTCA+TGG | + | chr7.3:3552622-3552641 | MS.gene072473:CDS | 30.0% | |
| TTCTATATTTGGTTAGGTAG+GGG | + | chr7.3:3549599-3549618 | MS.gene072473:intron | 30.0% | |
| TTGTTATAGTACAACAGGTT+TGG | - | chr7.3:3550922-3550941 | None:intergenic | 30.0% | |
| ! | AGCCATGATATGATAATGTT+TGG | + | chr7.3:3549020-3549039 | MS.gene072473:intron | 30.0% |
| ! | AGGTGTTTGTTAAGTGATAT+GGG | - | chr7.3:3548399-3548418 | None:intergenic | 30.0% |
| ! | ATTTGATGGGTAGTTATCAA+AGG | - | chr7.3:3549690-3549709 | None:intergenic | 30.0% |
| ! | CCTTTATAGTTTTTCCTTTG+AGG | - | chr7.3:3548856-3548875 | None:intergenic | 30.0% |
| ! | CTGGAAGTTTATTTCTTCTA+TGG | + | chr7.3:3551626-3551645 | MS.gene072473:intron | 30.0% |
| ! | CTTTTTCTGAGTTCATATAG+TGG | - | chr7.3:3549162-3549181 | None:intergenic | 30.0% |
| ! | GGAAGAATAAAATTCTAGCT+AGG | - | chr7.3:3548634-3548653 | None:intergenic | 30.0% |
| ! | GTAAATTTATTGACTGCAGA+TGG | + | chr7.3:3551062-3551081 | MS.gene072473:intron | 30.0% |
| ! | TTTGATGGGTAGTTATCAAA+GGG | - | chr7.3:3549689-3549708 | None:intergenic | 30.0% |
| ! | TTTTCTGAGTTCATATAGTG+GGG | - | chr7.3:3549160-3549179 | None:intergenic | 30.0% |
| AAGCCTATCCAAAATCAATC+CGG | - | chr7.3:3552095-3552114 | None:intergenic | 35.0% | |
| AAGGTCCTTATCAAGCATAA+TGG | + | chr7.3:3549321-3549340 | MS.gene072473:intron | 35.0% | |
| AATCCTGGACTTAATCCATT+TGG | + | chr7.3:3552501-3552520 | MS.gene072473:CDS | 35.0% | |
| AATTTACCTAGGATAACGCT+TGG | - | chr7.3:3548957-3548976 | None:intergenic | 35.0% | |
| ACAACTTTCTTCAATGTTGC+CGG | - | chr7.3:3549631-3549650 | None:intergenic | 35.0% | |
| ACTAAGTGTTCAATTCTTGG+CGG | - | chr7.3:3548537-3548556 | None:intergenic | 35.0% | |
| AGACATTACACACACCAAAA+TGG | - | chr7.3:3551719-3551738 | None:intergenic | 35.0% | |
| ATAAGACTTAGTGTGTGTGT+TGG | - | chr7.3:3548686-3548705 | None:intergenic | 35.0% | |
| ATGCGCCTAACTAAATCATA+TGG | - | chr7.3:3550828-3550847 | None:intergenic | 35.0% | |
| ATGGCATATTTGTCATCTTG+AGG | + | chr7.3:3551094-3551113 | MS.gene072473:CDS | 35.0% | |
| ATTGCAGAGATGATTAATCC+TGG | + | chr7.3:3552486-3552505 | MS.gene072473:CDS | 35.0% | |
| ATTTACCTAGGATAACGCTT+GGG | - | chr7.3:3548956-3548975 | None:intergenic | 35.0% | |
| ATTTCTACATTGATAGGCGT+TGG | + | chr7.3:3549294-3549313 | MS.gene072473:intron | 35.0% | |
| CAAAACATTATGCACTCTAG+TGG | + | chr7.3:3551789-3551808 | MS.gene072473:intron | 35.0% | |
| CAGTGAGAGTGAAAAAGAAA+CGG | + | chr7.3:3552545-3552564 | MS.gene072473:CDS | 35.0% | |
| CCATTGGATACAAAAACTAC+AGG | - | chr7.3:3549272-3549291 | None:intergenic | 35.0% | |
| CCGTCTTTCATTGCAAAATT+CGG | + | chr7.3:3549833-3549852 | MS.gene072473:CDS | 35.0% | |
| CGTCTTTCATTGCAAAATTC+GGG | + | chr7.3:3549834-3549853 | MS.gene072473:CDS | 35.0% | |
| CGTGCAGTTATCAATTTGAT+GGG | - | chr7.3:3549703-3549722 | None:intergenic | 35.0% | |
| GAATTTGGCACTTACAAATG+AGG | - | chr7.3:3548612-3548631 | None:intergenic | 35.0% | |
| GACATTACACACACCAAAAT+GGG | - | chr7.3:3551718-3551737 | None:intergenic | 35.0% | |
| GATGAATACATTTACAGAGC+TGG | + | chr7.3:3552651-3552670 | MS.gene072473:CDS | 35.0% | |
| GATTGTCAGAATTCTGAGTA+AGG | - | chr7.3:3550541-3550560 | None:intergenic | 35.0% | |
| GGAGATACTATATAGGCTAA+AGG | + | chr7.3:3552201-3552220 | MS.gene072473:intron | 35.0% | |
| GTGGAATATTTAAAGGAGAG+AGG | - | chr7.3:3550684-3550703 | None:intergenic | 35.0% | |
| GTTGCAGATCTGATTCAATT+TGG | + | chr7.3:3548719-3548738 | MS.gene072473:CDS | 35.0% | |
| GTTTGATCTTAGTCGTTAGA+CGG | + | chr7.3:3550075-3550094 | MS.gene072473:intron | 35.0% | |
| TAATGTTCCATCTCGTTCTT+GGG | + | chr7.3:3551917-3551936 | MS.gene072473:intron | 35.0% | |
| TAGGTAGCTAATTTCCATCT+TGG | - | chr7.3:3550854-3550873 | None:intergenic | 35.0% | |
| TATAAAATCACACTCGCACA+AGG | + | chr7.3:3550044-3550063 | MS.gene072473:intron | 35.0% | |
| TATTTGTCATCTTGAGGTCA+TGG | + | chr7.3:3551100-3551119 | MS.gene072473:CDS | 35.0% | |
| TCAACAAGCATGAATTTGGT+TGG | + | chr7.3:3548418-3548437 | MS.gene072473:CDS | 35.0% | |
| TCATCTTGAACAACAATAGC+TGG | - | chr7.3:3551146-3551165 | None:intergenic | 35.0% | |
| TCTATACCCCTCAACAAAAT+GGG | + | chr7.3:3551835-3551854 | MS.gene072473:intron | 35.0% | |
| TGGTGTGTGTAATGTCTATT+CGG | + | chr7.3:3551722-3551741 | MS.gene072473:intron | 35.0% | |
| TTACCTTCAGAAATAAGTCG+AGG | - | chr7.3:3550302-3550321 | None:intergenic | 35.0% | |
| TTATAAGATAGCACGCTCTT+AGG | - | chr7.3:3551952-3551971 | None:intergenic | 35.0% | |
| TTTCTACATTGATAGGCGTT+GGG | + | chr7.3:3549295-3549314 | MS.gene072473:intron | 35.0% | |
| ! | AACCAAATTCATGCTTGTTG+AGG | - | chr7.3:3548419-3548438 | None:intergenic | 35.0% |
| ! | ACTGATTCACATCAGTTACA+CGG | - | chr7.3:3548895-3548914 | None:intergenic | 35.0% |
| ! | ATTATAAGCAACTTCTAGGG+AGG | + | chr7.3:3550412-3550431 | MS.gene072473:intron | 35.0% |
| ! | CCATCAAATTGATAACTGCA+CGG | + | chr7.3:3549701-3549720 | MS.gene072473:CDS | 35.0% |
| ! | CCGAATTTTGCAATGAAAGA+CGG | - | chr7.3:3549836-3549855 | None:intergenic | 35.0% |
| ! | CCTGTAGTTTTTGTATCCAA+TGG | + | chr7.3:3549269-3549288 | MS.gene072473:intron | 35.0% |
| ! | GAGGTGTTTGTTAAGTGATA+TGG | - | chr7.3:3548400-3548419 | None:intergenic | 35.0% |
| ! | TTGATGGGTAGTTATCAAAG+GGG | - | chr7.3:3549688-3549707 | None:intergenic | 35.0% |
| !! | ATGAATTTGGTTGGTGTTGT+CGG | + | chr7.3:3548427-3548446 | MS.gene072473:CDS | 35.0% |
| !! | CACTAAGTCTTATTTCGTGA+AGG | + | chr7.3:3548693-3548712 | MS.gene072473:intron | 35.0% |
| !! | GAGATGTTGATTTGTGTGTT+TGG | - | chr7.3:3551865-3551884 | None:intergenic | 35.0% |
| !! | GTATTTTGCTCTTGTTTCTC+CGG | + | chr7.3:3548748-3548767 | MS.gene072473:CDS | 35.0% |
| !! | TTTCCAAATGGATTAAGTCC+AGG | - | chr7.3:3552507-3552526 | None:intergenic | 35.0% |
| !!! | GTAGTTTTAGATAAACCTGC+TGG | + | chr7.3:3549115-3549134 | MS.gene072473:CDS | 35.0% |
| AAACAGGTTACAGCTCATGA+AGG | - | chr7.3:3551440-3551459 | None:intergenic | 40.0% | |
| AAAGAGCCTAGTGTTGCAAT+TGG | + | chr7.3:3552597-3552616 | MS.gene072473:CDS | 40.0% | |
| AACTTCCAGAAAACGAATGG+AGG | - | chr7.3:3551615-3551634 | None:intergenic | 40.0% | |
| AAGAACACCCAAATTGACAC+CGG | - | chr7.3:3549999-3550018 | None:intergenic | 40.0% | |
| ACATAGACTCTTCTCCTTCA+TGG | + | chr7.3:3551894-3551913 | MS.gene072473:intron | 40.0% | |
| ACTGATTGCTTCACTAGCAA+AGG | - | chr7.3:3551471-3551490 | None:intergenic | 40.0% | |
| ACTTCCAGAAAACGAATGGA+GGG | - | chr7.3:3551614-3551633 | None:intergenic | 40.0% | |
| ATGAAGGAGAAGAGTCTATG+TGG | - | chr7.3:3551895-3551914 | None:intergenic | 40.0% | |
| ATGAGATTGACTGGAGATCA+AGG | + | chr7.3:3549068-3549087 | MS.gene072473:CDS | 40.0% | |
| ATTGACTGCAGATGGTATCA+AGG | + | chr7.3:3551070-3551089 | MS.gene072473:intron | 40.0% | |
| ATTGTGTTGAAGATTGTGGG+TGG | + | chr7.3:3551168-3551187 | MS.gene072473:CDS | 40.0% | |
| CAAAGAAGCAACTGAACCAT+TGG | + | chr7.3:3548811-3548830 | MS.gene072473:CDS | 40.0% | |
| CACCTCAACAAGCATGAATT+TGG | + | chr7.3:3548414-3548433 | MS.gene072473:CDS | 40.0% | |
| CAGAATTCTGAGTAAGGGAA+AGG | - | chr7.3:3550535-3550554 | None:intergenic | 40.0% | |
| CCGTGCAGTTATCAATTTGA+TGG | - | chr7.3:3549704-3549723 | None:intergenic | 40.0% | |
| CTATACCCCTCAACAAAATG+GGG | + | chr7.3:3551836-3551855 | MS.gene072473:intron | 40.0% | |
| CTATATGCGTCCTACTAACA+CGG | + | chr7.3:3550274-3550293 | MS.gene072473:CDS | 40.0% | |
| CTGAAGGTAACTACGCAAAT+TGG | + | chr7.3:3550312-3550331 | MS.gene072473:intron | 40.0% | |
| GAAGCAATCGATCATACTTC+GGG | - | chr7.3:3548494-3548513 | None:intergenic | 40.0% | |
| GAGATGGAACATTACCATGA+AGG | - | chr7.3:3551911-3551930 | None:intergenic | 40.0% | |
| GGAAGCAATCGATCATACTT+CGG | - | chr7.3:3548495-3548514 | None:intergenic | 40.0% | |
| GTAATGTTCCATCTCGTTCT+TGG | + | chr7.3:3551916-3551935 | MS.gene072473:intron | 40.0% | |
| GTAGCTTACTGTTTCACTGA+TGG | - | chr7.3:3548472-3548491 | None:intergenic | 40.0% | |
| GTCTATACCCCTCAACAAAA+TGG | + | chr7.3:3551834-3551853 | MS.gene072473:intron | 40.0% | |
| TCCATGGTTCATGGTATTAG+TGG | + | chr7.3:3550441-3550460 | MS.gene072473:intron | 40.0% | |
| TGGAATGTAGAAAGATTCCC+TGG | + | chr7.3:3551120-3551139 | MS.gene072473:CDS | 40.0% | |
| TTGACTGCAGATGGTATCAA+GGG | + | chr7.3:3551071-3551090 | MS.gene072473:intron | 40.0% | |
| TTTACCTAGGATAACGCTTG+GGG | - | chr7.3:3548955-3548974 | None:intergenic | 40.0% | |
| ! | ATTCTCTCCGGTGTCAATTT+GGG | + | chr7.3:3549989-3550008 | MS.gene072473:intron | 40.0% |
| ! | CAAATTGATAACTGCACGGA+AGG | + | chr7.3:3549705-3549724 | MS.gene072473:CDS | 40.0% |
| ! | GAACACTTAGTTGTTTCACG+AGG | + | chr7.3:3548546-3548565 | MS.gene072473:CDS | 40.0% |
| ! | TTAGGTGCTATGAGATTGAC+TGG | + | chr7.3:3549059-3549078 | MS.gene072473:intron | 40.0% |
| ! | TTCTACATTGATAGGCGTTG+GGG | + | chr7.3:3549296-3549315 | MS.gene072473:intron | 40.0% |
| ! | TTGTTTTCGCTCTTTCAACG+CGG | - | chr7.3:3552123-3552142 | None:intergenic | 40.0% |
| !! | GTGAATCAGTTTGTTGAACC+AGG | + | chr7.3:3548905-3548924 | MS.gene072473:CDS | 40.0% |
| !! | TCTAATTTGCTCTGCAGTAG+CGG | - | chr7.3:3548786-3548805 | None:intergenic | 40.0% |
| !! | TTACATACAGAAGTACCAGC+AGG | - | chr7.3:3549133-3549152 | None:intergenic | 40.0% |
| !!! | GCTCTTTTTTGCAGAACCAA+TGG | - | chr7.3:3548830-3548849 | None:intergenic | 40.0% |
| !!! | TAGTGTGTGTGTTGGTTTTG+CGG | - | chr7.3:3548678-3548697 | None:intergenic | 40.0% |
| AAAGCCCAACTCTCAGTACA+AGG | - | chr7.3:3550499-3550518 | None:intergenic | 45.0% | |
| AACATGACCCAAGAACGAGA+TGG | - | chr7.3:3551927-3551946 | None:intergenic | 45.0% | |
| AGAAGACAGAGTGACACGTT+TGG | + | chr7.3:3550746-3550765 | MS.gene072473:intron | 45.0% | |
| AGTAAGGGAAAGGAGAGGAT+TGG | - | chr7.3:3550525-3550544 | None:intergenic | 45.0% | |
| ATCAAGGATCATAGCTGTGG+AGG | + | chr7.3:3549084-3549103 | MS.gene072473:CDS | 45.0% | |
| ATCATCTCTGCAATTGCAGC+AGG | - | chr7.3:3552480-3552499 | None:intergenic | 45.0% | |
| ATTCTCTCCTTTGTCCTTGG+CGG | + | chr7.3:3551977-3551996 | MS.gene072473:intron | 45.0% | |
| CTACAGGACTTAGCAATGCT+AGG | - | chr7.3:3549256-3549275 | None:intergenic | 45.0% | |
| CTCATTCTCTCCTTTGTCCT+TGG | + | chr7.3:3551974-3551993 | MS.gene072473:intron | 45.0% | |
| CTTCCAGAAAACGAATGGAG+GGG | - | chr7.3:3551613-3551632 | None:intergenic | 45.0% | |
| CTTGCCTTGTACTGAGAGTT+GGG | + | chr7.3:3550492-3550511 | MS.gene072473:intron | 45.0% | |
| GAAGACAGAGTGACACGTTT+GGG | + | chr7.3:3550747-3550766 | MS.gene072473:intron | 45.0% | |
| GAGATCAAGGATCATAGCTG+TGG | + | chr7.3:3549081-3549100 | MS.gene072473:CDS | 45.0% | |
| GATGAGTTCGACCAGTAAGA+AGG | - | chr7.3:3551229-3551248 | None:intergenic | 45.0% | |
| GCAGCTTCTCCTTTACCAAT+TGG | + | chr7.3:3550239-3550258 | MS.gene072473:CDS | 45.0% | |
| GCCACTAATACCATGAACCA+TGG | - | chr7.3:3550445-3550464 | None:intergenic | 45.0% | |
| GGAGATTTGTGTGTAGGACA+TGG | - | chr7.3:3548516-3548535 | None:intergenic | 45.0% | |
| GGGTATAGACACAACACGTT+TGG | - | chr7.3:3551824-3551843 | None:intergenic | 45.0% | |
| GTAAGGGAAAGGAGAGGATT+GGG | - | chr7.3:3550524-3550543 | None:intergenic | 45.0% | |
| TAGAAAAAAGGGCCGAGTGA+TGG | - | chr7.3:3552009-3552028 | None:intergenic | 45.0% | |
| TCTTACTGGTCGAACTCATC+AGG | + | chr7.3:3551229-3551248 | MS.gene072473:CDS | 45.0% | |
| TCTTGCCTTGTACTGAGAGT+TGG | + | chr7.3:3550491-3550510 | MS.gene072473:intron | 45.0% | |
| TGAACAACAATAGCTGGCCA+GGG | - | chr7.3:3551140-3551159 | None:intergenic | 45.0% | |
| TGAAGGCCAATTGCAACACT+AGG | - | chr7.3:3552606-3552625 | None:intergenic | 45.0% | |
| TGCTCTGCAGAGTTGCTAAA+AGG | + | chr7.3:3551002-3551021 | MS.gene072473:intron | 45.0% | |
| TTCCAGAAAACGAATGGAGG+GGG | - | chr7.3:3551612-3551631 | None:intergenic | 45.0% | |
| TTCTGAGTAAGGGAAAGGAG+AGG | - | chr7.3:3550530-3550549 | None:intergenic | 45.0% | |
| TTGAACAACAATAGCTGGCC+AGG | - | chr7.3:3551141-3551160 | None:intergenic | 45.0% | |
| TTGTACTGAGAGTTGGGCTT+TGG | + | chr7.3:3550498-3550517 | MS.gene072473:intron | 45.0% | |
| TTGTAGGCTTGATGCTCAGT+AGG | + | chr7.3:3549394-3549413 | MS.gene072473:intron | 45.0% | |
| ! | CACTTAGTTGTTTCACGAGG+AGG | + | chr7.3:3548549-3548568 | MS.gene072473:CDS | 45.0% |
| ! | GATTCTCTCCGGTGTCAATT+TGG | + | chr7.3:3549988-3550007 | MS.gene072473:intron | 45.0% |
| ! | GCTTGCAAGGCACCAATAAT+TGG | + | chr7.3:3552438-3552457 | MS.gene072473:CDS | 45.0% |
| ! | TGAACATCAGAAGCGTGTTC+CGG | + | chr7.3:3552050-3552069 | MS.gene072473:intron | 45.0% |
| ! | TGGCTACCCCATTTTGTTGA+GGG | - | chr7.3:3551845-3551864 | None:intergenic | 45.0% |
| ! | TTGGCTACCCCATTTTGTTG+AGG | - | chr7.3:3551846-3551865 | None:intergenic | 45.0% |
| !! | AGCTCAATTTGCTGCTTGCA+AGG | + | chr7.3:3552425-3552444 | MS.gene072473:CDS | 45.0% |
| !! | CAAAAAAGAGCGTCCCTCAA+AGG | + | chr7.3:3548839-3548858 | MS.gene072473:CDS | 45.0% |
| !! | GCTCCTCGACTTATTTCTGA+AGG | + | chr7.3:3550296-3550315 | MS.gene072473:CDS | 45.0% |
| !! | TGGCCGGATTGATTTTGGAT+AGG | + | chr7.3:3552089-3552108 | MS.gene072473:intron | 45.0% |
| !! | TGTGTAGCGTAGTATTGGCT+AGG | + | chr7.3:3549794-3549813 | MS.gene072473:intron | 45.0% |
| !! | TTTACAGAGCTGGTTTGCCT+TGG | + | chr7.3:3552661-3552680 | MS.gene072473:CDS | 45.0% |
| AACCTTTGCAACTCGTGCCT+TGG | + | chr7.3:3549653-3549672 | MS.gene072473:CDS | 50.0% | |
| ACCTTTGCAACTCGTGCCTT+GGG | + | chr7.3:3549654-3549673 | MS.gene072473:CDS | 50.0% | |
| ACGCTTCTGATGTTCAGGCA+TGG | - | chr7.3:3552046-3552065 | None:intergenic | 50.0% | |
| AGCAAAGGCAGCTGGTAAAC+AGG | - | chr7.3:3551456-3551475 | None:intergenic | 50.0% | |
| AGGAGCAACTCCATGGTTCA+TGG | + | chr7.3:3550432-3550451 | MS.gene072473:intron | 50.0% | |
| ATTTGCTCTGCAGTAGCGGT+TGG | - | chr7.3:3548782-3548801 | None:intergenic | 50.0% | |
| CAAAGGGGTTGTCAATCCCA+AGG | - | chr7.3:3549673-3549692 | None:intergenic | 50.0% | |
| CGCTTCTGATGTTCAGGCAT+GGG | - | chr7.3:3552045-3552064 | None:intergenic | 50.0% | |
| CTGCAGATGGTATCAAGGGA+TGG | + | chr7.3:3551075-3551094 | MS.gene072473:intron | 50.0% | |
| CTGTTCTAACCCACCTGAGT+TGG | + | chr7.3:3549909-3549928 | MS.gene072473:intron | 50.0% | |
| CTTGGCGGAGATTTGTGTGT+AGG | - | chr7.3:3548522-3548541 | None:intergenic | 50.0% | |
| GAATCGAACCTGAGACCTTG+CGG | - | chr7.3:3549973-3549992 | None:intergenic | 50.0% | |
| GGAACACGCTTCTGATGTTC+AGG | - | chr7.3:3552051-3552070 | None:intergenic | 50.0% | |
| GGTTAGGTAGGGGAAACTAC+CGG | + | chr7.3:3549609-3549628 | MS.gene072473:intron | 50.0% | |
| GTCTCAGGTTCGATTCTCTC+CGG | + | chr7.3:3549977-3549996 | MS.gene072473:intron | 50.0% | |
| GTTAGGCGCATTAGCCAAGA+TGG | + | chr7.3:3550837-3550856 | MS.gene072473:intron | 50.0% | |
| GTTCAGGCATGGGCGTAAAA+GGG | - | chr7.3:3552035-3552054 | None:intergenic | 50.0% | |
| TAGGCTTGATGCTCAGTAGG+TGG | + | chr7.3:3549397-3549416 | MS.gene072473:intron | 50.0% | |
| TCCAGAAAACGAATGGAGGG+GGG | - | chr7.3:3551611-3551630 | None:intergenic | 50.0% | |
| TGTTCAGGCATGGGCGTAAA+AGG | - | chr7.3:3552036-3552055 | None:intergenic | 50.0% | |
| TGTTCCGGGTGGTCCAATAA+CGG | + | chr7.3:3552065-3552084 | MS.gene072473:intron | 50.0% | |
| ! | GAACATCAGAAGCGTGTTCC+GGG | + | chr7.3:3552051-3552070 | MS.gene072473:intron | 50.0% |
| ! | GGCTACCCCATTTTGTTGAG+GGG | - | chr7.3:3551844-3551863 | None:intergenic | 50.0% |
| ! | TTGATAACTGCACGGAAGGC+TGG | + | chr7.3:3549709-3549728 | MS.gene072473:CDS | 50.0% |
| !! | ATTGATAGGCGTTGGGGTCA+AGG | + | chr7.3:3549302-3549321 | MS.gene072473:intron | 50.0% |
| !! | GTGGTATTGGCTTGGGTCTT+GGG | + | chr7.3:3549936-3549955 | MS.gene072473:intron | 50.0% |
| AGACCCAAGCCAATACCACC+AGG | - | chr7.3:3549935-3549954 | None:intergenic | 55.0% | |
| AGTCGAGGAGCCGTGTTAGT+AGG | - | chr7.3:3550287-3550306 | None:intergenic | 55.0% | |
| CAATACCACCAGGCCAACTC+AGG | - | chr7.3:3549925-3549944 | None:intergenic | 55.0% | |
| CCAGAAAACGAATGGAGGGG+GGG | - | chr7.3:3551610-3551629 | None:intergenic | 55.0% | |
| GCTTCACTAGCAAAGGCAGC+TGG | - | chr7.3:3551464-3551483 | None:intergenic | 55.0% | |
| GTTCCGGGTGGTCCAATAAC+GGG | + | chr7.3:3552066-3552085 | MS.gene072473:intron | 55.0% | |
| TCAATCCGGCCACCCGTTAT+TGG | - | chr7.3:3552081-3552100 | None:intergenic | 55.0% | |
| TCCCAAGGCACGAGTTGCAA+AGG | - | chr7.3:3549658-3549677 | None:intergenic | 55.0% | |
| TCTAGGGAGGAGCAACTCCA+TGG | + | chr7.3:3550425-3550444 | MS.gene072473:intron | 55.0% | |
| TGCACCCCAAGCGTTATCCT+AGG | + | chr7.3:3548948-3548967 | MS.gene072473:CDS | 55.0% | |
| TGCACTCGCAGGTAAGTTCC+TGG | - | chr7.3:3548926-3548945 | None:intergenic | 55.0% | |
| ! | CTGAGTTGGCCTGGTGGTAT+TGG | + | chr7.3:3549923-3549942 | MS.gene072473:intron | 55.0% |
| !! | AAAGGGCCGAGTGATGGACT+TGG | - | chr7.3:3552003-3552022 | None:intergenic | 55.0% |
| !! | ACAGAGCTGGTTTGCCTTGG+TGG | + | chr7.3:3552664-3552683 | MS.gene072473:CDS | 55.0% |
| !! | ACGGGTGGCCGGATTGATTT+TGG | + | chr7.3:3552084-3552103 | MS.gene072473:intron | 55.0% |
| !! | GGTGGTATTGGCTTGGGTCT+TGG | + | chr7.3:3549935-3549954 | MS.gene072473:intron | 55.0% |
| !! | TGGCCTGGTGGTATTGGCTT+GGG | + | chr7.3:3549929-3549948 | MS.gene072473:intron | 55.0% |
| !! | TTGGCCTGGTGGTATTGGCT+TGG | + | chr7.3:3549928-3549947 | MS.gene072473:intron | 55.0% |
| ACCACCAGGCCAACTCAGGT+GGG | - | chr7.3:3549921-3549940 | None:intergenic | 60.0% | |
| CAGCTGCCGCGGAACAAGAT+TGG | - | chr7.3:3548339-3548358 | None:intergenic | 60.0% | |
| CCACCCGTTATTGGACCACC+CGG | - | chr7.3:3552072-3552091 | None:intergenic | 60.0% | |
| GACTTGGCCGCCAAGGACAA+AGG | - | chr7.3:3551987-3552006 | None:intergenic | 60.0% | |
| GTAGCGGTTGGAGGAGGTTC+CGG | - | chr7.3:3548770-3548789 | None:intergenic | 60.0% | |
| GTGGCGCCAATCTTGTTCCG+CGG | + | chr7.3:3548330-3548349 | MS.gene072473:CDS | 60.0% | |
| TACCACCAGGCCAACTCAGG+TGG | - | chr7.3:3549922-3549941 | None:intergenic | 60.0% | |
| TCGAACCTGAGACCTTGCGG+AGG | - | chr7.3:3549970-3549989 | None:intergenic | 60.0% | |
| TCTGCAGTAGCGGTTGGAGG+AGG | - | chr7.3:3548776-3548795 | None:intergenic | 60.0% | |
| TGCTCTGCAGTAGCGGTTGG+AGG | - | chr7.3:3548779-3548798 | None:intergenic | 60.0% | |
| TGGCGGCCAAGTCCATCACT+CGG | + | chr7.3:3551994-3552013 | MS.gene072473:intron | 60.0% | |
| ! | CATCAGAAGCGTGTTCCGGG+TGG | + | chr7.3:3552054-3552073 | MS.gene072473:intron | 60.0% |
| ! | CCCCCCCTCCATTCGTTTTC+TGG | + | chr7.3:3551607-3551626 | MS.gene072473:intron | 60.0% |
| ! | CTAACCCACCTGAGTTGGCC+TGG | + | chr7.3:3549914-3549933 | MS.gene072473:intron | 60.0% |
| !! | AGTGATGGACTTGGCCGCCA+AGG | - | chr7.3:3551994-3552013 | None:intergenic | 60.0% |
| !! | GAGCTGGTTTGCCTTGGTGG+AGG | + | chr7.3:3552667-3552686 | MS.gene072473:CDS | 60.0% |
| !! | GTGGTCCAATAACGGGTGGC+CGG | + | chr7.3:3552073-3552092 | MS.gene072473:intron | 60.0% |
| CTGTCGTAGCCTCGGCGTTC+CGG | + | chr7.3:3548356-3548375 | MS.gene072473:CDS | 65.0% | |
| GTGCTCCTCCGCAAGGTCTC+AGG | + | chr7.3:3549962-3549981 | MS.gene072473:intron | 65.0% | |
| TAGCCTCGGCGTTCCGGATG+CGG | + | chr7.3:3548362-3548381 | MS.gene072473:CDS | 65.0% | |
| ! | ACCCACCTGAGTTGGCCTGG+TGG | + | chr7.3:3549917-3549936 | MS.gene072473:intron | 65.0% |
| ! | CCGGGTGGTCCAATAACGGG+TGG | + | chr7.3:3552069-3552088 | MS.gene072473:intron | 65.0% |
| ! | TGGGAGTGTGCTCCTCCGCA+AGG | + | chr7.3:3549955-3549974 | MS.gene072473:intron | 65.0% |
| CGAGGCTACGACAGCTGCCG+CGG | - | chr7.3:3548350-3548369 | None:intergenic | 70.0% | |
| CGCGGCAGCTGTCGTAGCCT+CGG | + | chr7.3:3548348-3548367 | MS.gene072473:CDS | 70.0% | |
| CGTTCCGGATGCGGCGAGTG+CGG | + | chr7.3:3548371-3548390 | MS.gene072473:CDS | 70.0% | |
| GGAACCGCACTCGCCGCATC+CGG | - | chr7.3:3548378-3548397 | None:intergenic | 70.0% | |
| TGGGGTGCACGTGCACTCGC+AGG | - | chr7.3:3548937-3548956 | None:intergenic | 70.0% | |
| TCGCCGCATCCGGAACGCCG+AGG | - | chr7.3:3548368-3548387 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 3548315 | 3552695 | 3548315 | ID=MS.gene072473 |
| chr7.3 | mRNA | 3548315 | 3552695 | 3548315 | ID=MS.gene072473.t1;Parent=MS.gene072473 |
| chr7.3 | exon | 3548315 | 3548616 | 3548315 | ID=MS.gene072473.t1.exon1;Parent=MS.gene072473.t1 |
| chr7.3 | CDS | 3548315 | 3548616 | 3548315 | ID=cds.MS.gene072473.t1;Parent=MS.gene072473.t1 |
| chr7.3 | exon | 3548715 | 3548969 | 3548715 | ID=MS.gene072473.t1.exon2;Parent=MS.gene072473.t1 |
| chr7.3 | CDS | 3548715 | 3548969 | 3548715 | ID=cds.MS.gene072473.t1;Parent=MS.gene072473.t1 |
| chr7.3 | exon | 3549063 | 3549144 | 3549063 | ID=MS.gene072473.t1.exon3;Parent=MS.gene072473.t1 |
| chr7.3 | CDS | 3549063 | 3549144 | 3549063 | ID=cds.MS.gene072473.t1;Parent=MS.gene072473.t1 |
| chr7.3 | exon | 3549615 | 3549730 | 3549615 | ID=MS.gene072473.t1.exon4;Parent=MS.gene072473.t1 |
| chr7.3 | CDS | 3549615 | 3549730 | 3549615 | ID=cds.MS.gene072473.t1;Parent=MS.gene072473.t1 |
| chr7.3 | exon | 3549801 | 3549855 | 3549801 | ID=MS.gene072473.t1.exon5;Parent=MS.gene072473.t1 |
| chr7.3 | CDS | 3549801 | 3549855 | 3549801 | ID=cds.MS.gene072473.t1;Parent=MS.gene072473.t1 |
| chr7.3 | exon | 3550206 | 3550317 | 3550206 | ID=MS.gene072473.t1.exon6;Parent=MS.gene072473.t1 |
| chr7.3 | CDS | 3550206 | 3550317 | 3550206 | ID=cds.MS.gene072473.t1;Parent=MS.gene072473.t1 |
| chr7.3 | exon | 3551081 | 3551250 | 3551081 | ID=MS.gene072473.t1.exon7;Parent=MS.gene072473.t1 |
| chr7.3 | CDS | 3551081 | 3551250 | 3551081 | ID=cds.MS.gene072473.t1;Parent=MS.gene072473.t1 |
| chr7.3 | exon | 3552420 | 3552695 | 3552420 | ID=MS.gene072473.t1.exon8;Parent=MS.gene072473.t1 |
| chr7.3 | CDS | 3552420 | 3552695 | 3552420 | ID=cds.MS.gene072473.t1;Parent=MS.gene072473.t1 |
| Gene Sequence |
| Protein sequence |
