Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene050898.t1 | XP_003626259.1 | 97 | 428 | 13 | 0 | 29 | 456 | 6 | 433 | 2.30E-234 | 821.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene050898.t1 | Q3E6S8 | 61.9 | 425 | 143 | 6 | 36 | 453 | 14 | 426 | 1.3e-140 | 501.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene050898.t1 | A2Q336 | 97.0 | 428 | 13 | 0 | 29 | 456 | 6 | 433 | 1.7e-234 | 821.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene050898 | MS.gene23109 | 0.888155 | 7.58E-73 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene67376 | MS.gene050898 | PPI |
MS.gene050898 | MS.gene036453 | PPI |
MS.gene004101 | MS.gene050898 | PPI |
MS.gene021049 | MS.gene050898 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene050898.t1 | MTR_7g113170 | 96.963 | 428 | 13 | 0 | 29 | 456 | 6 | 433 | 0.0 | 839 |
MS.gene050898.t1 | MTR_7g113170 | 96.936 | 359 | 11 | 0 | 29 | 387 | 6 | 364 | 0.0 | 706 |
MS.gene050898.t1 | MTR_6g007030 | 30.293 | 307 | 170 | 10 | 151 | 436 | 128 | 411 | 8.00e-32 | 126 |
MS.gene050898.t1 | MTR_6g011810 | 28.571 | 308 | 182 | 10 | 170 | 453 | 165 | 458 | 4.01e-30 | 122 |
MS.gene050898.t1 | MTR_2g019140 | 35.519 | 183 | 108 | 5 | 170 | 343 | 133 | 314 | 3.68e-22 | 97.4 |
MS.gene050898.t1 | MTR_5g464730 | 29.740 | 269 | 145 | 7 | 201 | 439 | 93 | 347 | 2.41e-20 | 92.8 |
MS.gene050898.t1 | MTR_5g064160 | 27.046 | 281 | 160 | 7 | 190 | 439 | 102 | 368 | 3.22e-19 | 89.7 |
MS.gene050898.t1 | MTR_5g064160 | 27.143 | 280 | 159 | 7 | 190 | 438 | 137 | 402 | 4.41e-19 | 89.7 |
MS.gene050898.t1 | MTR_7g113160 | 100.000 | 28 | 0 | 0 | 1 | 28 | 46 | 73 | 5.07e-11 | 60.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene050898.t1 | AT5G27660 | 62.824 | 425 | 145 | 5 | 36 | 453 | 14 | 432 | 0.0 | 526 |
MS.gene050898.t1 | AT5G27660 | 61.882 | 425 | 143 | 6 | 36 | 453 | 9 | 421 | 1.41e-180 | 511 |
MS.gene050898.t1 | AT3G27925 | 31.193 | 327 | 178 | 11 | 151 | 452 | 135 | 439 | 1.62e-33 | 131 |
MS.gene050898.t1 | AT3G27925 | 31.193 | 327 | 178 | 11 | 151 | 452 | 135 | 439 | 1.62e-33 | 131 |
MS.gene050898.t1 | AT5G39830 | 29.545 | 308 | 179 | 10 | 170 | 453 | 155 | 448 | 5.09e-31 | 124 |
MS.gene050898.t1 | AT5G39830 | 28.525 | 305 | 172 | 10 | 170 | 453 | 155 | 434 | 9.34e-27 | 112 |
MS.gene050898.t1 | AT4G18370 | 36.458 | 192 | 110 | 6 | 170 | 351 | 131 | 320 | 2.53e-21 | 94.7 |
Find 135 sgRNAs with CRISPR-Local
Find 347 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTCATTCCCTAATGTCAATA+AGG | 0.269170 | 7.1:-3192422 | MS.gene050898:CDS |
TGTATGGCACAGGGAAATTC+TGG | 0.299439 | 7.1:-3192947 | MS.gene050898:intron |
TCCTTCTTCGGACATGTCTA+AGG | 0.309122 | 7.1:-3195020 | MS.gene050898:CDS |
ATTGGCTTTGTAGATTTCTA+TGG | 0.309418 | 7.1:-3194803 | MS.gene050898:intron |
TGGAGGGCCACTTGTCAATA+TGG | 0.315113 | 7.1:-3192927 | MS.gene050898:CDS |
CTAGGCTTCGTCCCGGGGAT+TGG | 0.328014 | 7.1:-3193371 | MS.gene050898:CDS |
TGACCGTAAAAGCAGTGATT+TGG | 0.333135 | 7.1:-3193122 | MS.gene050898:CDS |
TGCGACTTTAACTGTGATTC+CGG | 0.336668 | 7.1:-3191074 | MS.gene050898:CDS |
AGAATGCCCTTATTGACATT+AGG | 0.346180 | 7.1:+3192415 | None:intergenic |
GGGTCCCCTGGTGATCGTGC+TGG | 0.357975 | 7.1:-3191563 | MS.gene050898:CDS |
GAATGCCCTTATTGACATTA+GGG | 0.359755 | 7.1:+3192416 | None:intergenic |
AAGCCATCTAAGGATACTTT+TGG | 0.364970 | 7.1:-3194968 | MS.gene050898:CDS |
GACCGTAAAAGCAGTGATTT+GGG | 0.371160 | 7.1:-3193121 | MS.gene050898:CDS |
GACATGTCTAAGGAAACTTC+TGG | 0.371904 | 7.1:-3195010 | MS.gene050898:CDS |
ATCTGTTTGTAAATACTCTC+TGG | 0.378364 | 7.1:+3193084 | None:intergenic |
TGATGAATCAAAGCCATCTA+AGG | 0.379781 | 7.1:-3194978 | MS.gene050898:CDS |
AGCAGTGATTTGGGATTTAG+TGG | 0.380979 | 7.1:-3193112 | MS.gene050898:CDS |
GATGTTGTCATTGAATTTGA+TGG | 0.389841 | 7.1:-3191527 | MS.gene050898:CDS |
AGTTAGCCCTGTTCCTTCTT+CGG | 0.392277 | 7.1:-3195032 | MS.gene050898:CDS |
TTGAACACAAACCTTCCCTT+TGG | 0.396372 | 7.1:+3194673 | None:intergenic |
AAATGATGGTGGACAAAGTT+GGG | 0.397529 | 7.1:-3191138 | MS.gene050898:CDS |
TAGGCTTCGTCCCGGGGATT+GGG | 0.404252 | 7.1:-3193370 | MS.gene050898:CDS |
CAAAGCTTGGTTCTTCAACT+AGG | 0.415056 | 7.1:-3193389 | MS.gene050898:CDS |
CCAAGCTTTGCTTCCGGAAG+TGG | 0.420101 | 7.1:+3193402 | None:intergenic |
AAATTCTGAAACCCCACTTC+CGG | 0.423531 | 7.1:-3193415 | MS.gene050898:CDS |
CAAGATGGAAGGACATTTGA+GGG | 0.423591 | 7.1:-3193486 | MS.gene050898:CDS |
CTTCAACTAGGCTTCGTCCC+GGG | 0.427401 | 7.1:-3193377 | MS.gene050898:CDS |
CGGAACCCAGCACGATCACC+AGG | 0.431496 | 7.1:+3191557 | None:intergenic |
TGCCATTGCAAGATATATCA+TGG | 0.437451 | 7.1:-3195246 | MS.gene050898:CDS |
CTACCAAAAGTATCCTTAGA+TGG | 0.439534 | 7.1:+3194965 | None:intergenic |
TCATTCCCTAATGTCAATAA+GGG | 0.444524 | 7.1:-3192421 | MS.gene050898:CDS |
GGAATCCAATCTCAGCTTGT+AGG | 0.450834 | 7.1:-3191050 | None:intergenic |
TATTCTCAGCGTGTTGGCAC+TGG | 0.452088 | 7.1:-3196591 | MS.gene050898:CDS |
AGTCTCCTACAAGCTGAGAT+TGG | 0.457251 | 7.1:+3191045 | None:intergenic |
GGTCCCCTGGTGATCGTGCT+GGG | 0.461837 | 7.1:-3191562 | MS.gene050898:CDS |
ACTGGAATTAGTGTGGTTAT+CGG | 0.462039 | 7.1:+3195556 | None:intergenic |
ACATGTCTAAGGAAACTTCT+GGG | 0.469601 | 7.1:-3195009 | MS.gene050898:CDS |
GAAGAACCAAGCTTTGCTTC+CGG | 0.472595 | 7.1:+3193396 | None:intergenic |
GTGGACGTAACAAATCAAAC+GGG | 0.472824 | 7.1:+3195209 | None:intergenic |
TTTGCTACAGGGAAGAGTAT+TGG | 0.475530 | 7.1:-3194779 | MS.gene050898:CDS |
GTTGCAGGTTATTGAAATGA+TGG | 0.475950 | 7.1:-3191152 | MS.gene050898:intron |
TAGGTAACTCCTGGGTCCCC+TGG | 0.475953 | 7.1:-3191575 | MS.gene050898:CDS |
AGTGTTGGCTGCTGATGGGT+TGG | 0.476294 | 7.1:-3192873 | MS.gene050898:CDS |
TCCTTAGACATGTCCGAAGA+AGG | 0.477491 | 7.1:+3195019 | None:intergenic |
ATAGAGCATTTCAAGAAAAG+TGG | 0.478194 | 7.1:-3192815 | MS.gene050898:CDS |
TGTGGACGTAACAAATCAAA+CGG | 0.478244 | 7.1:+3195208 | None:intergenic |
GTGTTGGCTGCTGATGGGTT+GGG | 0.482417 | 7.1:-3192872 | MS.gene050898:CDS |
GACATGTCCGAAGAAGGAAC+AGG | 0.489693 | 7.1:+3195025 | None:intergenic |
TACCTCCTTCATGCTTTCCA+CGG | 0.491263 | 7.1:+3191499 | None:intergenic |
CAAGCTTTGCTTCCGGAAGT+GGG | 0.491393 | 7.1:+3193403 | None:intergenic |
AGCTCTGCCGTTGGAGCTGT+GGG | 0.496151 | 7.1:-3195611 | MS.gene050898:CDS |
GATCGTGCTGGGTTCCGTCC+TGG | 0.498642 | 7.1:-3191551 | MS.gene050898:CDS |
GCAAGATGGAAGGACATTTG+AGG | 0.500220 | 7.1:-3193487 | MS.gene050898:CDS |
ATTGAAGTCACTTTGCAAGA+TGG | 0.504105 | 7.1:-3193501 | MS.gene050898:CDS |
CGGGGATTGGGTAATAGCCA+TGG | 0.506433 | 7.1:-3193358 | MS.gene050898:CDS |
ATCGAAATATTAACAACAGC+AGG | 0.506520 | 7.1:+3194908 | None:intergenic |
CCACTTCCGGAAGCAAAGCT+TGG | 0.510741 | 7.1:-3193402 | MS.gene050898:CDS |
AAGGACATTTGAGGGGAAAG+TGG | 0.512120 | 7.1:-3193478 | MS.gene050898:CDS |
AGAGTGATACGGCCATGGCT+TGG | 0.514213 | 7.1:-3192502 | MS.gene050898:CDS |
GGAACAATCATTAACAAAGA+TGG | 0.515974 | 7.1:-3194752 | MS.gene050898:CDS |
ATGAAAGTGTTGGCTGCTGA+TGG | 0.519245 | 7.1:-3192878 | MS.gene050898:CDS |
AGAACGGCGGCGAGGTAGAT+CGG | 0.519256 | 7.1:+3196564 | None:intergenic |
TTCAACTAGGCTTCGTCCCG+GGG | 0.519860 | 7.1:-3193376 | MS.gene050898:CDS |
AAGCTCTGCCGTTGGAGCTG+TGG | 0.521174 | 7.1:-3195612 | MS.gene050898:CDS |
GCAAATGCTGCTGCTAAAGT+TGG | 0.521599 | 7.1:-3194932 | MS.gene050898:CDS |
GAAATGATGGTGGACAAAGT+TGG | 0.526009 | 7.1:-3191139 | MS.gene050898:CDS |
ACCTCCTTCATGCTTTCCAC+GGG | 0.531605 | 7.1:+3191500 | None:intergenic |
GCACAAAAGGTTCATCCAAA+GGG | 0.534147 | 7.1:-3194688 | MS.gene050898:CDS |
CATGAAAATCAACGACAACA+TGG | 0.539853 | 7.1:+3194711 | None:intergenic |
TCTTCAACTAGGCTTCGTCC+CGG | 0.539957 | 7.1:-3193378 | MS.gene050898:CDS |
TCAGGAGAGTGATACGGCCA+TGG | 0.540162 | 7.1:-3192507 | MS.gene050898:intron |
ACAGGGAAGAGTATTGGCTC+TGG | 0.541432 | 7.1:-3194773 | MS.gene050898:CDS |
CTGTCACTGCTGGTATTGTA+AGG | 0.545354 | 7.1:-3193311 | MS.gene050898:intron |
CATGGCTATTACCCAATCCC+CGG | 0.547015 | 7.1:+3193359 | None:intergenic |
AAGGGAATGCGGACAACCCA+TGG | 0.551296 | 7.1:+3193341 | None:intergenic |
GGCACAAAAGGTTCATCCAA+AGG | 0.554675 | 7.1:-3194689 | MS.gene050898:CDS |
TAAGGGCATTCTTGTACCAA+TGG | 0.554993 | 7.1:-3192404 | MS.gene050898:intron |
TTGAACAGAAGCTCTGCCGT+TGG | 0.555512 | 7.1:-3195620 | MS.gene050898:CDS |
ATAGCTAGGTTCATGAAGAA+AGG | 0.556055 | 7.1:-3196618 | None:intergenic |
GGGCCACTTGTCAATATGGA+TGG | 0.558327 | 7.1:-3192923 | MS.gene050898:CDS |
CTTCAGAATACTGTCACTGC+TGG | 0.562372 | 7.1:-3193321 | MS.gene050898:CDS |
TAGAGCATTTCAAGAAAAGT+GGG | 0.563537 | 7.1:-3192814 | MS.gene050898:intron |
ACACACAGAGTCGATTGGTA+CGG | 0.565045 | 7.1:+3192844 | None:intergenic |
AGATATATCATGGTTGACAT+TGG | 0.565755 | 7.1:-3195236 | MS.gene050898:CDS |
AACCATGATATATCTTGCAA+TGG | 0.566757 | 7.1:+3195244 | None:intergenic |
GATATATCTTGCAATGGCAA+AGG | 0.570631 | 7.1:+3195250 | None:intergenic |
CAGCAGTGACAGTATTCTGA+AGG | 0.571751 | 7.1:+3193322 | None:intergenic |
TAGGAACGTTCGTACGTGTG+CGG | 0.573882 | 7.1:-3195276 | MS.gene050898:CDS |
AATATGGATGGAGAAATTGT+TGG | 0.576439 | 7.1:-3192911 | MS.gene050898:CDS |
TCTGTTTGTAAATACTCTCT+GGG | 0.577942 | 7.1:+3193085 | None:intergenic |
AACGATACCCACAGCTCCAA+CGG | 0.578717 | 7.1:+3195604 | None:intergenic |
GCTGTGGGTATCGTTGCTGT+TGG | 0.578767 | 7.1:-3195596 | MS.gene050898:CDS |
AAGCTGAGATTGGATTCCTC+CGG | 0.580230 | 7.1:+3191055 | None:intergenic |
TCTCGAATATCTCGCTGCTG+AGG | 0.581328 | 7.1:-3196544 | MS.gene050898:intron |
AAGTCACTTTGCAAGATGGA+AGG | 0.582092 | 7.1:-3193497 | MS.gene050898:CDS |
GGGGATTGGGTAATAGCCAT+GGG | 0.587526 | 7.1:-3193357 | MS.gene050898:CDS |
ATGAAAATCAACGACAACAT+GGG | 0.587711 | 7.1:+3194712 | None:intergenic |
AAAAGGTTCATCCAAAGGGA+AGG | 0.590674 | 7.1:-3194684 | MS.gene050898:intron |
ATGGCTATTACCCAATCCCC+GGG | 0.595774 | 7.1:+3193360 | None:intergenic |
TGAAAGTGTTGGCTGCTGAT+GGG | 0.600081 | 7.1:-3192877 | MS.gene050898:CDS |
GAACCCAGCACGATCACCAG+GGG | 0.600193 | 7.1:+3191559 | None:intergenic |
GCACGATCACCAGGGGACCC+AGG | 0.601429 | 7.1:+3191566 | None:intergenic |
ATTGCTCACTGGAATTAGTG+TGG | 0.602326 | 7.1:+3195549 | None:intergenic |
TCTCCATCCATATTGACAAG+TGG | 0.603386 | 7.1:+3192920 | None:intergenic |
CAAAGTTGGGGTGCCCATGA+AGG | 0.604534 | 7.1:-3191125 | MS.gene050898:CDS |
AACAGATTGTGCAATTAATG+TGG | 0.605597 | 7.1:-3193068 | MS.gene050898:intron |
CATGTCTAAGGAAACTTCTG+GGG | 0.608468 | 7.1:-3195008 | MS.gene050898:CDS |
TGAATTTGATGGAAAGCCCG+TGG | 0.609844 | 7.1:-3191516 | MS.gene050898:CDS |
TGGTCGAAAGACGACAAATG+TGG | 0.613228 | 7.1:+3195190 | None:intergenic |
AAAGCCCGTGGAAAGCATGA+AGG | 0.616163 | 7.1:-3191504 | MS.gene050898:CDS |
GGTCGCTATTCTCAGCGTGT+TGG | 0.618289 | 7.1:-3196597 | MS.gene050898:CDS |
AAGCTTTGCTTCCGGAAGTG+GGG | 0.621714 | 7.1:+3193404 | None:intergenic |
TTGTCGTCTTTCGACCAACA+TGG | 0.625198 | 7.1:-3195184 | MS.gene050898:intron |
AATTCAATGACAACATCACC+AGG | 0.627515 | 7.1:+3191533 | None:intergenic |
AGCATTCTTAGTCCAAGCCA+TGG | 0.630955 | 7.1:+3192490 | None:intergenic |
AGCAGTGACAGTATTCTGAA+GGG | 0.641778 | 7.1:+3193323 | None:intergenic |
GTTAATATTTCGATTCCACA+AGG | 0.645580 | 7.1:-3194899 | MS.gene050898:intron |
AGAAAGAGGACAAACCATGT+TGG | 0.646314 | 7.1:+3195170 | None:intergenic |
GGAACCCAGCACGATCACCA+GGG | 0.647337 | 7.1:+3191558 | None:intergenic |
GACTTTAACTGTGATTCCGG+AGG | 0.651382 | 7.1:-3191071 | MS.gene050898:CDS |
ACAGTATTCTGAAGGGAATG+CGG | 0.654266 | 7.1:+3193330 | None:intergenic |
ATGGCACAGGGAAATTCTGG+AGG | 0.659592 | 7.1:-3192944 | MS.gene050898:intron |
CAATGACAACATCACCAGGA+CGG | 0.663393 | 7.1:+3191537 | None:intergenic |
GCCCGTGGAAAGCATGAAGG+AGG | 0.665398 | 7.1:-3191501 | MS.gene050898:intron |
GCAGGTTATTGAAATGATGG+TGG | 0.673889 | 7.1:-3191149 | MS.gene050898:intron |
AGCAGCGAGATATTCGAGAA+CGG | 0.674031 | 7.1:+3196548 | None:intergenic |
AGTGAACATCATGAAAGTGT+TGG | 0.676552 | 7.1:-3192888 | MS.gene050898:CDS |
ACATGTCCGAAGAAGGAACA+GGG | 0.682454 | 7.1:+3195026 | None:intergenic |
TGGCACAGGGAAATTCTGGA+GGG | 0.686679 | 7.1:-3192943 | MS.gene050898:intron |
AAGATGGAAGGACATTTGAG+GGG | 0.693003 | 7.1:-3193485 | MS.gene050898:CDS |
GATATTCGAGAACGGCGGCG+AGG | 0.697780 | 7.1:+3196556 | None:intergenic |
AATGATGGTGGACAAAGTTG+GGG | 0.709009 | 7.1:-3191137 | MS.gene050898:CDS |
ATGTCTAAGGAAACTTCTGG+GGG | 0.710738 | 7.1:-3195007 | MS.gene050898:CDS |
AGCGAGATATTCGAGAACGG+CGG | 0.714587 | 7.1:+3196551 | None:intergenic |
TGGACGTAACAAATCAAACG+GGG | 0.745894 | 7.1:+3195210 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AATTTAAAGTAAAAGAAAAT+AGG | + | chr7.1:3194419-3194438 | None:intergenic | 10.0% |
!!! | TTTGTAATTAATTAATGTTT+TGG | - | chr7.1:3191179-3191198 | MS.gene050898:intron | 10.0% |
!!! | TTTTTTTATAACAATAACAA+CGG | - | chr7.1:3195819-3195838 | MS.gene050898:intron | 10.0% |
!! | AAGATAAAATAAAATGATCT+GGG | - | chr7.1:3196246-3196265 | MS.gene050898:intron | 15.0% |
!! | TAAGATAAAATAAAATGATC+TGG | - | chr7.1:3196245-3196264 | MS.gene050898:intron | 15.0% |
!! | TAATCTTGAAATAAAGTTAA+TGG | - | chr7.1:3192157-3192176 | MS.gene050898:intron | 15.0% |
!!! | GTTTATTTAGAATTAATGAA+CGG | - | chr7.1:3191678-3191697 | MS.gene050898:intron | 15.0% |
!!! | TATTTTCAGAATAATTTTCT+AGG | + | chr7.1:3195588-3195607 | None:intergenic | 15.0% |
!! | AAAATTACACAAAACATAAG+CGG | + | chr7.1:3195899-3195918 | None:intergenic | 20.0% |
!! | AAGAAATATATCTTGAATTG+TGG | + | chr7.1:3193531-3193550 | None:intergenic | 20.0% |
!! | AAGCGAAATTCATAATTAAT+CGG | - | chr7.1:3191154-3191173 | MS.gene050898:intron | 20.0% |
!! | AATAATCAATTCATCTAACA+TGG | - | chr7.1:3192349-3192368 | MS.gene050898:intron | 20.0% |
!! | AGATAAAATAAAATGATCTG+GGG | - | chr7.1:3196247-3196266 | MS.gene050898:intron | 20.0% |
!! | CAAACTTATACTAATCTTTA+GGG | - | chr7.1:3196315-3196334 | MS.gene050898:intron | 20.0% |
!! | GATCATAATATATCCATAAA+AGG | + | chr7.1:3195032-3195051 | None:intergenic | 20.0% |
!! | TATTGATATTCTTATGTTGT+AGG | - | chr7.1:3193912-3193931 | MS.gene050898:intron | 20.0% |
!! | TGTTAAATCTAACATTGAAA+TGG | + | chr7.1:3194445-3194464 | None:intergenic | 20.0% |
!!! | AAATTTAAACGTTTTTGACT+AGG | - | chr7.1:3196063-3196082 | MS.gene050898:intron | 20.0% |
!!! | AGTAAACTTTTTTTCTTTTC+AGG | - | chr7.1:3195132-3195151 | MS.gene050898:intron | 20.0% |
!!! | ATTTAGAACTGAAAATTTGT+AGG | - | chr7.1:3192578-3192597 | MS.gene050898:intron | 20.0% |
!!! | CTGATTTTTTAAATGTCTTT+TGG | - | chr7.1:3194469-3194488 | MS.gene050898:intron | 20.0% |
!!! | TTCATGTATTGTATGATTTT+TGG | - | chr7.1:3194501-3194520 | MS.gene050898:intron | 20.0% |
!!! | TTTAGAACTGAAAATTTGTA+GGG | - | chr7.1:3192579-3192598 | MS.gene050898:intron | 20.0% |
! | AAAGAAAATAGGTTAAAACC+AGG | + | chr7.1:3194408-3194427 | None:intergenic | 25.0% |
! | AATTCAATTGTTAGAGTGAT+AGG | + | chr7.1:3193649-3193668 | None:intergenic | 25.0% |
! | AGAAAGAATTAACAAATACC+AGG | + | chr7.1:3191934-3191953 | None:intergenic | 25.0% |
! | AGACAAATGAGAATTCTTAT+TGG | - | chr7.1:3191764-3191783 | MS.gene050898:intron | 25.0% |
! | AGGATGTTAAGAAAGATAAA+GGG | + | chr7.1:3193747-3193766 | None:intergenic | 25.0% |
! | ATATCAATAACCAATTGTTC+TGG | + | chr7.1:3193901-3193920 | None:intergenic | 25.0% |
! | ATTACAAATCAAAGAGAAGA+TGG | - | chr7.1:3195707-3195726 | MS.gene050898:intron | 25.0% |
! | CATAATGAAGAATAATCTCA+CGG | + | chr7.1:3196439-3196458 | None:intergenic | 25.0% |
! | CATCTAAAGATCGATTAATT+GGG | + | chr7.1:3195285-3195304 | None:intergenic | 25.0% |
! | CCAAACTTATACTAATCTTT+AGG | - | chr7.1:3196314-3196333 | MS.gene050898:intron | 25.0% |
! | CCTAAAGATTAGTATAAGTT+TGG | + | chr7.1:3196317-3196336 | None:intergenic | 25.0% |
! | GACAAATGAGAATTCTTATT+GGG | - | chr7.1:3191765-3191784 | MS.gene050898:intron | 25.0% |
! | GTCAATCAAAATTGTTTATG+CGG | + | chr7.1:3195054-3195073 | None:intergenic | 25.0% |
! | TATTAAAAGTGAATGTGGAA+AGG | + | chr7.1:3193681-3193700 | None:intergenic | 25.0% |
! | TGGTATATACTAACTAGTTA+TGG | + | chr7.1:3193511-3193530 | None:intergenic | 25.0% |
! | TTCAGATTGTCACATATAAA+CGG | + | chr7.1:3194953-3194972 | None:intergenic | 25.0% |
! | TTTAGATCTAACTATTTCGT+TGG | - | chr7.1:3191524-3191543 | MS.gene050898:CDS | 25.0% |
! | TTTATTGAAGTGCATTTACA+TGG | - | chr7.1:3191467-3191486 | MS.gene050898:intron | 25.0% |
! | TTTGATCTATCAATAAGATG+AGG | + | chr7.1:3195613-3195632 | None:intergenic | 25.0% |
!! | ATACTTGTTACTATCATACT+TGG | - | chr7.1:3195530-3195549 | MS.gene050898:intron | 25.0% |
!! | CTTACAATTTTCACCTTTTA+TGG | - | chr7.1:3195016-3195035 | MS.gene050898:CDS | 25.0% |
!! | TTGAGTCTTAAATGATTTTC+AGG | + | chr7.1:3194021-3194040 | None:intergenic | 25.0% |
!! | TTGATTGACATACTTTTATG+TGG | - | chr7.1:3195065-3195084 | MS.gene050898:intron | 25.0% |
!!! | ATGTAGTGGTTTGTTAAATA+TGG | - | chr7.1:3191554-3191573 | MS.gene050898:CDS | 25.0% |
!!! | CCACATTCACTTTTAATAAT+GGG | - | chr7.1:3193683-3193702 | MS.gene050898:intron | 25.0% |
!!! | GAATTTCGCTTTGAAATATA+CGG | + | chr7.1:3191145-3191164 | None:intergenic | 25.0% |
!!! | TCCACATTCACTTTTAATAA+TGG | - | chr7.1:3193682-3193701 | MS.gene050898:intron | 25.0% |
AACAACACAGGGTTAATATT+TGG | + | chr7.1:3191363-3191382 | None:intergenic | 30.0% | |
AACAGATTGTGCAATTAATG+TGG | - | chr7.1:3194589-3194608 | MS.gene050898:intron | 30.0% | |
AACCATGATATATCTTGCAA+TGG | + | chr7.1:3192416-3192435 | None:intergenic | 30.0% | |
AACGATTCATTCAGATGAAA+AGG | + | chr7.1:3192792-3192811 | None:intergenic | 30.0% | |
AAGTGAACACAAAAACAAAG+AGG | - | chr7.1:3195631-3195650 | MS.gene050898:CDS | 30.0% | |
AATATGGATGGAGAAATTGT+TGG | - | chr7.1:3194746-3194765 | MS.gene050898:CDS | 30.0% | |
AATATTGACGATGCATACAA+AGG | - | chr7.1:3192313-3192332 | MS.gene050898:intron | 30.0% | |
AATGTTGTCTAATCAGAAAG+AGG | + | chr7.1:3195855-3195874 | None:intergenic | 30.0% | |
ACTTGTAATGAGCTTATGTA+TGG | + | chr7.1:3193802-3193821 | None:intergenic | 30.0% | |
AGATATATCATGGTTGACAT+TGG | - | chr7.1:3192421-3192440 | MS.gene050898:CDS | 30.0% | |
AGATTTAGTTAATTGCTCAC+TGG | + | chr7.1:3192122-3192141 | None:intergenic | 30.0% | |
ATAAACTACCCAAGTAGATA+TGG | - | chr7.1:3194638-3194657 | MS.gene050898:intron | 30.0% | |
ATATAACTGTAGCTTGATAC+TGG | + | chr7.1:3193160-3193179 | None:intergenic | 30.0% | |
ATATTGAGAACCAATTGATC+CGG | + | chr7.1:3193959-3193978 | None:intergenic | 30.0% | |
ATCCATATTCCATATCTACT+TGG | + | chr7.1:3194650-3194669 | None:intergenic | 30.0% | |
ATCGAAATATTAACAACAGC+AGG | + | chr7.1:3192752-3192771 | None:intergenic | 30.0% | |
ATCTGTTTGTAAATACTCTC+TGG | + | chr7.1:3194576-3194595 | None:intergenic | 30.0% | |
ATGAAAATCAACGACAACAT+GGG | + | chr7.1:3192948-3192967 | None:intergenic | 30.0% | |
ATGATAGTTTATCATGCTGT+AGG | - | chr7.1:3193826-3193845 | MS.gene050898:intron | 30.0% | |
ATTAATTGGGAACATACCAT+TGG | + | chr7.1:3195272-3195291 | None:intergenic | 30.0% | |
CAAGATTAGAGAGAAAATTG+TGG | + | chr7.1:3193714-3193733 | None:intergenic | 30.0% | |
CATAGATGTAAAATTGTTGC+AGG | - | chr7.1:3196490-3196509 | MS.gene050898:intron | 30.0% | |
CCCATTATTAAAAGTGAATG+TGG | + | chr7.1:3193686-3193705 | None:intergenic | 30.0% | |
CGTAACTATCACAATTAGAA+TGG | + | chr7.1:3195785-3195804 | None:intergenic | 30.0% | |
CTACATGAGTTAGAATAAGA+CGG | - | chr7.1:3193483-3193502 | MS.gene050898:CDS | 30.0% | |
CTAGGATTCTCACTTTAATA+GGG | + | chr7.1:3195570-3195589 | None:intergenic | 30.0% | |
CTTGTAATGAGCTTATGTAT+GGG | + | chr7.1:3193801-3193820 | None:intergenic | 30.0% | |
GAAAGAAAGTTCAACTGTTA+GGG | + | chr7.1:3193608-3193627 | None:intergenic | 30.0% | |
GAAATAATGTGTTTGTCACA+AGG | - | chr7.1:3196040-3196059 | MS.gene050898:intron | 30.0% | |
GAATTAGGAAAATTGCTTCA+AGG | - | chr7.1:3191309-3191328 | MS.gene050898:intron | 30.0% | |
GAGGATGTTAAGAAAGATAA+AGG | + | chr7.1:3193748-3193767 | None:intergenic | 30.0% | |
GATGTATTTGTGCAAAACTA+AGG | + | chr7.1:3193416-3193435 | None:intergenic | 30.0% | |
GATGTTGTCATTGAATTTGA+TGG | - | chr7.1:3196130-3196149 | MS.gene050898:intron | 30.0% | |
GCATCTAAAGATCGATTAAT+TGG | + | chr7.1:3195286-3195305 | None:intergenic | 30.0% | |
GGAACAATCATTAACAAAGA+TGG | - | chr7.1:3192905-3192924 | MS.gene050898:CDS | 30.0% | |
GTAGATATGGAATATGGATT+TGG | - | chr7.1:3194651-3194670 | MS.gene050898:intron | 30.0% | |
GTTAATATTTCGATTCCACA+AGG | - | chr7.1:3192758-3192777 | MS.gene050898:intron | 30.0% | |
GTTACTATCATACTTGGATA+GGG | - | chr7.1:3195536-3195555 | MS.gene050898:intron | 30.0% | |
TAAAAAAGTTACCGCGTAAT+TGG | + | chr7.1:3191741-3191760 | None:intergenic | 30.0% | |
TAAAAGTTCAAACCAGAAAG+AGG | + | chr7.1:3192504-3192523 | None:intergenic | 30.0% | |
TATTTATCCAACCAATTACG+CGG | - | chr7.1:3191727-3191746 | MS.gene050898:intron | 30.0% | |
TCATTCCCTAATGTCAATAA+GGG | - | chr7.1:3195236-3195255 | MS.gene050898:CDS | 30.0% | |
TCCAAGCAGAAAGTTTAATT+AGG | - | chr7.1:3194987-3195006 | MS.gene050898:CDS | 30.0% | |
TCCATATTCCATATCTACTT+GGG | + | chr7.1:3194649-3194668 | None:intergenic | 30.0% | |
TCTAACATGGCTTCAAATTT+AGG | - | chr7.1:3192362-3192381 | MS.gene050898:intron | 30.0% | |
TCTGTTTGTAAATACTCTCT+GGG | + | chr7.1:3194575-3194594 | None:intergenic | 30.0% | |
TGAAAGAAAGTTCAACTGTT+AGG | + | chr7.1:3193609-3193628 | None:intergenic | 30.0% | |
TGGTTAATACTTGAGTAGTT+AGG | - | chr7.1:3195085-3195104 | MS.gene050898:intron | 30.0% | |
TGTAATGTAGGTTCTTGAAT+TGG | - | chr7.1:3191209-3191228 | MS.gene050898:intron | 30.0% | |
TGTTACTATCATACTTGGAT+AGG | - | chr7.1:3195535-3195554 | MS.gene050898:intron | 30.0% | |
TTCAAAGTTGTTTGCAAAGT+TGG | - | chr7.1:3195388-3195407 | MS.gene050898:intron | 30.0% | |
TTCAAGACAGTGTACATATT+TGG | + | chr7.1:3193026-3193045 | None:intergenic | 30.0% | |
TTCATTCCCTAATGTCAATA+AGG | - | chr7.1:3195235-3195254 | MS.gene050898:CDS | 30.0% | |
TTTGATAAATAACTGTGTCG+AGG | - | chr7.1:3191702-3191721 | MS.gene050898:intron | 30.0% | |
TTTGGTATGTGATGTAATGT+AGG | - | chr7.1:3191197-3191216 | MS.gene050898:intron | 30.0% | |
! | ATAGAGCATTTCAAGAAAAG+TGG | - | chr7.1:3194842-3194861 | MS.gene050898:intron | 30.0% |
! | ATCTATCATGAGTTATTTCC+TGG | - | chr7.1:3191913-3191932 | MS.gene050898:intron | 30.0% |
! | TAGAGCATTTCAAGAAAAGT+GGG | - | chr7.1:3194843-3194862 | MS.gene050898:intron | 30.0% |
! | TATTATGATAGTGAAGCCAT+GGG | - | chr7.1:3195491-3195510 | MS.gene050898:intron | 30.0% |
! | TCTAGGATTCTCACTTTAAT+AGG | + | chr7.1:3195571-3195590 | None:intergenic | 30.0% |
! | TGAAGAATCTCTCTGATTTT+GGG | - | chr7.1:3191981-3192000 | MS.gene050898:intron | 30.0% |
! | TTAATGGCATGCTTTTCAAT+TGG | - | chr7.1:3192173-3192192 | MS.gene050898:intron | 30.0% |
! | TTATTATGATAGTGAAGCCA+TGG | - | chr7.1:3195490-3195509 | MS.gene050898:intron | 30.0% |
! | TTGAAGAATCTCTCTGATTT+TGG | - | chr7.1:3191980-3191999 | MS.gene050898:intron | 30.0% |
! | TTTTCAGAATCTAGATTCAC+AGG | - | chr7.1:3195318-3195337 | MS.gene050898:intron | 30.0% |
!! | ATTGGCTTTGTAGATTTCTA+TGG | - | chr7.1:3192854-3192873 | MS.gene050898:CDS | 30.0% |
!! | ATTTCTATGGTTTTGCTACA+GGG | - | chr7.1:3192867-3192886 | MS.gene050898:CDS | 30.0% |
!! | CTTTTAACTACAACCTTCAT+GGG | + | chr7.1:3196548-3196567 | None:intergenic | 30.0% |
!! | TCTTTTAACTACAACCTTCA+TGG | + | chr7.1:3196549-3196568 | None:intergenic | 30.0% |
!!! | TCGATTTTTTTTACTGTCTG+TGG | + | chr7.1:3196416-3196435 | None:intergenic | 30.0% |
AAAAGTGAATGTGGAAAGGA+AGG | + | chr7.1:3193677-3193696 | None:intergenic | 35.0% | |
AAACCCCCAACAAAAAAGTA+CGG | + | chr7.1:3191821-3191840 | None:intergenic | 35.0% | |
AAGAAAAGTGGGTATGTTTC+TGG | - | chr7.1:3194854-3194873 | MS.gene050898:intron | 35.0% | |
AATAACTGCAAGTAAATCGC+TGG | + | chr7.1:3191633-3191652 | None:intergenic | 35.0% | |
AATTCAATGACAACATCACC+AGG | + | chr7.1:3196127-3196146 | None:intergenic | 35.0% | |
ACATGTCTAAGGAAACTTCT+GGG | - | chr7.1:3192648-3192667 | MS.gene050898:intron | 35.0% | |
ACCCAAGTAGATATGGAATA+TGG | - | chr7.1:3194645-3194664 | MS.gene050898:intron | 35.0% | |
ACTGGAATTAGTGTGGTTAT+CGG | + | chr7.1:3192104-3192123 | None:intergenic | 35.0% | |
ACTGTAACAACCAAACCTTT+AGG | - | chr7.1:3193451-3193470 | MS.gene050898:CDS | 35.0% | |
AGAATGCCCTTATTGACATT+AGG | + | chr7.1:3195245-3195264 | None:intergenic | 35.0% | |
AGTTCAACTGTTAGGGTAAA+AGG | + | chr7.1:3193601-3193620 | None:intergenic | 35.0% | |
AGTTCTCTGTGATGTAAATG+TGG | - | chr7.1:3193077-3193096 | MS.gene050898:CDS | 35.0% | |
ATAGTAGCTCATTTAGCTGT+AGG | - | chr7.1:3193855-3193874 | MS.gene050898:intron | 35.0% | |
ATCTACTTGGGTAGTTTATG+CGG | + | chr7.1:3194637-3194656 | None:intergenic | 35.0% | |
CACATACATCTAAACATGCA+TGG | + | chr7.1:3192554-3192573 | None:intergenic | 35.0% | |
CATGAAAATCAACGACAACA+TGG | + | chr7.1:3192949-3192968 | None:intergenic | 35.0% | |
CTAATCAGAAAGAGGAGTAA+GGG | + | chr7.1:3195847-3195866 | None:intergenic | 35.0% | |
CTTTGTATGACTCAAAGCTA+GGG | - | chr7.1:3193236-3193255 | MS.gene050898:intron | 35.0% | |
GAAAAGGTAGAAAAACCTTG+TGG | + | chr7.1:3192776-3192795 | None:intergenic | 35.0% | |
GAAGGTTTGTGTTCAAGAAA+GGG | - | chr7.1:3192991-3193010 | MS.gene050898:intron | 35.0% | |
GAATGCCCTTATTGACATTA+GGG | + | chr7.1:3195244-3195263 | None:intergenic | 35.0% | |
GAGCAACACAATGCATATTA+TGG | + | chr7.1:3195993-3196012 | None:intergenic | 35.0% | |
GATATATCTTGCAATGGCAA+AGG | + | chr7.1:3192410-3192429 | None:intergenic | 35.0% | |
GATCCATTCCCAACAAAATA+GGG | - | chr7.1:3193317-3193336 | MS.gene050898:CDS | 35.0% | |
GCCTAATTAAACTTTCTGCT+TGG | + | chr7.1:3194991-3195010 | None:intergenic | 35.0% | |
GCTAAATGAGCTACTATACA+AGG | + | chr7.1:3193852-3193871 | None:intergenic | 35.0% | |
GTACTTTCTGAGTCATGATT+TGG | - | chr7.1:3193285-3193304 | MS.gene050898:intron | 35.0% | |
GTTGCAGGTTATTGAAATGA+TGG | - | chr7.1:3196505-3196524 | MS.gene050898:intron | 35.0% | |
TAATCAGAAAGAGGAGTAAG+GGG | + | chr7.1:3195846-3195865 | None:intergenic | 35.0% | |
TACACAAAACATAAGCGGAA+TGG | + | chr7.1:3195894-3195913 | None:intergenic | 35.0% | |
TCGTTGGATGATAAATGTAG+TGG | - | chr7.1:3191540-3191559 | MS.gene050898:CDS | 35.0% | |
TCTAATCAGAAAGAGGAGTA+AGG | + | chr7.1:3195848-3195867 | None:intergenic | 35.0% | |
TGATCCATTCCCAACAAAAT+AGG | - | chr7.1:3193316-3193335 | MS.gene050898:CDS | 35.0% | |
TGATGAATCAAAGCCATCTA+AGG | - | chr7.1:3192679-3192698 | MS.gene050898:intron | 35.0% | |
TGCCATTGCAAGATATATCA+TGG | - | chr7.1:3192411-3192430 | MS.gene050898:CDS | 35.0% | |
TGTGGACGTAACAAATCAAA+CGG | + | chr7.1:3192452-3192471 | None:intergenic | 35.0% | |
TTGAGATTATGCTGATGGTT+TGG | - | chr7.1:3192828-3192847 | MS.gene050898:CDS | 35.0% | |
TTGCATGTTATCTGCTTGTA+TGG | - | chr7.1:3194694-3194713 | MS.gene050898:CDS | 35.0% | |
! | AAAAAGTACGGTCATCGAAA+TGG | + | chr7.1:3191809-3191828 | None:intergenic | 35.0% |
! | AAAAGTACGGTCATCGAAAT+GGG | + | chr7.1:3191808-3191827 | None:intergenic | 35.0% |
! | AAGAATCTCTCTGATTTTGG+GGG | - | chr7.1:3191983-3192002 | MS.gene050898:intron | 35.0% |
! | AAGCAATGCCCTATTTTGTT+GGG | + | chr7.1:3193328-3193347 | None:intergenic | 35.0% |
! | AAGCCATCTAAGGATACTTT+TGG | - | chr7.1:3192689-3192708 | MS.gene050898:intron | 35.0% |
! | AGTGAACATCATGAAAGTGT+TGG | - | chr7.1:3194769-3194788 | MS.gene050898:CDS | 35.0% |
! | ATGCAAACGAAACATGCTTT+TGG | + | chr7.1:3193127-3193146 | None:intergenic | 35.0% |
! | ATGTGGTAGAAGAGTACAAT+TGG | - | chr7.1:3193094-3193113 | MS.gene050898:CDS | 35.0% |
! | ATTGAAGTCACTTTGCAAGA+TGG | - | chr7.1:3194156-3194175 | MS.gene050898:intron | 35.0% |
! | ATTTTACACACAGAGTCGAT+TGG | + | chr7.1:3194821-3194840 | None:intergenic | 35.0% |
! | GAAGAATCTCTCTGATTTTG+GGG | - | chr7.1:3191982-3192001 | MS.gene050898:intron | 35.0% |
! | TAAGCAATGCCCTATTTTGT+TGG | + | chr7.1:3193329-3193348 | None:intergenic | 35.0% |
! | TCGTTTTCATTCAGTTCTGT+AGG | + | chr7.1:3193371-3193390 | None:intergenic | 35.0% |
! | TGCAAACGAAACATGCTTTT+GGG | + | chr7.1:3193126-3193145 | None:intergenic | 35.0% |
! | TTTTCTTTGGCAACAACACA+GGG | + | chr7.1:3191374-3191393 | None:intergenic | 35.0% |
!! | AAATGATGGTGGACAAAGTT+GGG | - | chr7.1:3196519-3196538 | MS.gene050898:intron | 35.0% |
!! | ATCCCAAATCACTGCTTTTA+CGG | + | chr7.1:3194541-3194560 | None:intergenic | 35.0% |
!! | CGTTGAAGAGTGTAGAATTT+TGG | - | chr7.1:3191883-3191902 | MS.gene050898:intron | 35.0% |
!! | CTACCAAAAGTATCCTTAGA+TGG | + | chr7.1:3192695-3192714 | None:intergenic | 35.0% |
!! | GATTTCTATGGTTTTGCTAC+AGG | - | chr7.1:3192866-3192885 | MS.gene050898:CDS | 35.0% |
!! | GTTGATTTTCATGGCACAAA+AGG | - | chr7.1:3192956-3192975 | MS.gene050898:intron | 35.0% |
!! | TGCTTTCTTTTGCTATGCTT+TGG | - | chr7.1:3195450-3195469 | MS.gene050898:intron | 35.0% |
!! | TTCTTTTCAGGAGAGTGATA+CGG | - | chr7.1:3195144-3195163 | MS.gene050898:intron | 35.0% |
!! | TTTTTGACTAGGTAACTCCT+GGG | - | chr7.1:3196074-3196093 | MS.gene050898:intron | 35.0% |
!!! | ATGACCGTACTTTTTTGTTG+GGG | - | chr7.1:3191814-3191833 | MS.gene050898:intron | 35.0% |
!!! | CATGTTGTCGTTGATTTTCA+TGG | - | chr7.1:3192947-3192966 | MS.gene050898:intron | 35.0% |
!!! | CTCTTTTGAGATTATGCTGA+TGG | - | chr7.1:3192823-3192842 | MS.gene050898:CDS | 35.0% |
!!! | GATGACCGTACTTTTTTGTT+GGG | - | chr7.1:3191813-3191832 | MS.gene050898:intron | 35.0% |
AAAAGGTTCATCCAAAGGGA+AGG | - | chr7.1:3192973-3192992 | MS.gene050898:intron | 40.0% | |
AAAGTTACCGCGTAATTGGT+TGG | + | chr7.1:3191737-3191756 | None:intergenic | 40.0% | |
AACAACCAAACCTTTAGGTG+AGG | - | chr7.1:3193456-3193475 | MS.gene050898:CDS | 40.0% | |
AACGACGATTCTGTGAATTC+TGG | - | chr7.1:3193386-3193405 | MS.gene050898:CDS | 40.0% | |
AAGATGGAAGGACATTTGAG+GGG | - | chr7.1:3194172-3194191 | MS.gene050898:intron | 40.0% | |
ACGAAACGCAGTTAACAATC+TGG | - | chr7.1:3191656-3191675 | MS.gene050898:intron | 40.0% | |
AGAAAGAGGACAAACCATGT+TGG | + | chr7.1:3192490-3192509 | None:intergenic | 40.0% | |
AGCAGTGACAGTATTCTGAA+GGG | + | chr7.1:3194337-3194356 | None:intergenic | 40.0% | |
ATCTAAATCCCTGCTAACGT+TGG | - | chr7.1:3193553-3193572 | MS.gene050898:intron | 40.0% | |
ATGTAGGTTCTTGAATTGGC+TGG | - | chr7.1:3191213-3191232 | MS.gene050898:intron | 40.0% | |
ATGTAGTTGACCTCACCTAA+AGG | + | chr7.1:3193469-3193488 | None:intergenic | 40.0% | |
ATGTCTAAGGAAACTTCTGG+GGG | - | chr7.1:3192650-3192669 | MS.gene050898:intron | 40.0% | |
ATTGCTCACTGGAATTAGTG+TGG | + | chr7.1:3192111-3192130 | None:intergenic | 40.0% | |
CAAGATGGAAGGACATTTGA+GGG | - | chr7.1:3194171-3194190 | MS.gene050898:intron | 40.0% | |
CACAATGCATATTATGGCAG+AGG | + | chr7.1:3195987-3196006 | None:intergenic | 40.0% | |
CATGTCTAAGGAAACTTCTG+GGG | - | chr7.1:3192649-3192668 | MS.gene050898:intron | 40.0% | |
CTGAAAACTCGACAGCAAAA+AGG | + | chr7.1:3193777-3193796 | None:intergenic | 40.0% | |
GACAGCAAAAAGGCAAAATG+AGG | + | chr7.1:3193767-3193786 | None:intergenic | 40.0% | |
GACATGTCTAAGGAAACTTC+TGG | - | chr7.1:3192647-3192666 | MS.gene050898:intron | 40.0% | |
GACCGTAAAAGCAGTGATTT+GGG | - | chr7.1:3194536-3194555 | MS.gene050898:intron | 40.0% | |
GCACAAAAGGTTCATCCAAA+GGG | - | chr7.1:3192969-3192988 | MS.gene050898:intron | 40.0% | |
GCAGGTTATTGAAATGATGG+TGG | - | chr7.1:3196508-3196527 | MS.gene050898:intron | 40.0% | |
GCTTTGTATGACTCAAAGCT+AGG | - | chr7.1:3193235-3193254 | MS.gene050898:intron | 40.0% | |
GGAAGGTTTGTGTTCAAGAA+AGG | - | chr7.1:3192990-3193009 | MS.gene050898:intron | 40.0% | |
GGTGCGAAGATAAAACTTTC+TGG | - | chr7.1:3194367-3194386 | MS.gene050898:intron | 40.0% | |
GTGAGGAACGATGATGAATT+AGG | - | chr7.1:3191294-3191313 | MS.gene050898:intron | 40.0% | |
GTGGACGTAACAAATCAAAC+GGG | + | chr7.1:3192451-3192470 | None:intergenic | 40.0% | |
TCTACTTGGGTAGTTTATGC+GGG | + | chr7.1:3194636-3194655 | None:intergenic | 40.0% | |
TCTCCATCCATATTGACAAG+TGG | + | chr7.1:3194740-3194759 | None:intergenic | 40.0% | |
TCTGATGTCTTCATTTCACG+AGG | + | chr7.1:3194106-3194125 | None:intergenic | 40.0% | |
TGACCGTAAAAGCAGTGATT+TGG | - | chr7.1:3194535-3194554 | MS.gene050898:intron | 40.0% | |
TGCGACTTTAACTGTGATTC+CGG | - | chr7.1:3196583-3196602 | MS.gene050898:CDS | 40.0% | |
TGGACGTAACAAATCAAACG+GGG | + | chr7.1:3192450-3192469 | None:intergenic | 40.0% | |
TGTAGGTTCTTGAATTGGCT+GGG | - | chr7.1:3191214-3191233 | MS.gene050898:intron | 40.0% | |
TTATCTGCTTGTATGGCACA+GGG | - | chr7.1:3194701-3194720 | MS.gene050898:CDS | 40.0% | |
TTGAACACAAACCTTCCCTT+TGG | + | chr7.1:3192987-3193006 | None:intergenic | 40.0% | |
TTGTGATAGTTACGTGTAGC+AGG | - | chr7.1:3195791-3195810 | MS.gene050898:intron | 40.0% | |
! | AACATGGTTTGTCCTCTTTC+TGG | - | chr7.1:3192489-3192508 | MS.gene050898:CDS | 40.0% |
! | AACCACTGTCACAACCTTTT+CGG | + | chr7.1:3191850-3191869 | None:intergenic | 40.0% |
! | AAGTCACTTTGCAAGATGGA+AGG | - | chr7.1:3194160-3194179 | MS.gene050898:intron | 40.0% |
! | AATGGGCTCAATATAACCCA+CGG | + | chr7.1:3191791-3191810 | None:intergenic | 40.0% |
! | ACAGTATTCTGAAGGGAATG+CGG | + | chr7.1:3194330-3194349 | None:intergenic | 40.0% |
! | AGCAGTGATTTGGGATTTAG+TGG | - | chr7.1:3194545-3194564 | MS.gene050898:intron | 40.0% |
! | ATGCCCTATTTTGTTGGGAA+TGG | + | chr7.1:3193323-3193342 | None:intergenic | 40.0% |
! | ATGCTGATGGTTTGGAGTAT+TGG | - | chr7.1:3192836-3192855 | MS.gene050898:CDS | 40.0% |
! | CAAAGCTTGGTTCTTCAACT+AGG | - | chr7.1:3194268-3194287 | MS.gene050898:intron | 40.0% |
! | GTTTTCTTTGGCAACAACAC+AGG | + | chr7.1:3191375-3191394 | None:intergenic | 40.0% |
! | TTTGCTACAGGGAAGAGTAT+TGG | - | chr7.1:3192878-3192897 | MS.gene050898:CDS | 40.0% |
!! | AAATTCTGAAACCCCACTTC+CGG | - | chr7.1:3194242-3194261 | MS.gene050898:intron | 40.0% |
!! | AATGATGGTGGACAAAGTTG+GGG | - | chr7.1:3196520-3196539 | MS.gene050898:intron | 40.0% |
!! | GAAATGATGGTGGACAAAGT+TGG | - | chr7.1:3196518-3196537 | MS.gene050898:intron | 40.0% |
!! | GTTTTTGACTAGGTAACTCC+TGG | - | chr7.1:3196073-3196092 | MS.gene050898:intron | 40.0% |
!! | TAAGGGCATTCTTGTACCAA+TGG | - | chr7.1:3195253-3195272 | MS.gene050898:CDS | 40.0% |
!! | TTGTATAGTAGCTTGCTTGC+CGG | - | chr7.1:3193937-3193956 | MS.gene050898:intron | 40.0% |
!!! | CGATGACCGTACTTTTTTGT+TGG | - | chr7.1:3191812-3191831 | MS.gene050898:intron | 40.0% |
!!! | TGACCGTACTTTTTTGTTGG+GGG | - | chr7.1:3191815-3191834 | MS.gene050898:intron | 40.0% |
AAGCTGAGATTGGATTCCTC+CGG | + | chr7.1:3196605-3196624 | None:intergenic | 45.0% | |
AAGGACATTTGAGGGGAAAG+TGG | - | chr7.1:3194179-3194198 | MS.gene050898:intron | 45.0% | |
ACACACAGAGTCGATTGGTA+CGG | + | chr7.1:3194816-3194835 | None:intergenic | 45.0% | |
ACATGTCCGAAGAAGGAACA+GGG | + | chr7.1:3192634-3192653 | None:intergenic | 45.0% | |
ACTCAAAGTCCAACGTTAGC+AGG | + | chr7.1:3193565-3193584 | None:intergenic | 45.0% | |
AGCAGCGAGATATTCGAGAA+CGG | + | chr7.1:3191112-3191131 | None:intergenic | 45.0% | |
AGCATTCTTAGTCCAAGCCA+TGG | + | chr7.1:3195170-3195189 | None:intergenic | 45.0% | |
AGGGTGGCTTAAGATCTGAT+GGG | - | chr7.1:3193255-3193274 | MS.gene050898:intron | 45.0% | |
AGTGAATGTGGAAAGGAAGG+AGG | + | chr7.1:3193674-3193693 | None:intergenic | 45.0% | |
AGTTAGCCCTGTTCCTTCTT+CGG | - | chr7.1:3192625-3192644 | MS.gene050898:intron | 45.0% | |
CAAGGTGTGACAATTGCTAG+CGG | - | chr7.1:3191327-3191346 | MS.gene050898:intron | 45.0% | |
CAATGACAACATCACCAGGA+CGG | + | chr7.1:3196123-3196142 | None:intergenic | 45.0% | |
CAGCAGTGACAGTATTCTGA+AGG | + | chr7.1:3194338-3194357 | None:intergenic | 45.0% | |
CTCAAAGTCCAACGTTAGCA+GGG | + | chr7.1:3193564-3193583 | None:intergenic | 45.0% | |
CTGTCACTGCTGGTATTGTA+AGG | - | chr7.1:3194346-3194365 | MS.gene050898:intron | 45.0% | |
CTTCAGAATACTGTCACTGC+TGG | - | chr7.1:3194336-3194355 | MS.gene050898:intron | 45.0% | |
GAAGAACCAAGCTTTGCTTC+CGG | + | chr7.1:3194264-3194283 | None:intergenic | 45.0% | |
GACTTTAACTGTGATTCCGG+AGG | - | chr7.1:3196586-3196605 | MS.gene050898:CDS | 45.0% | |
GAGAATTCTTATTGGGCCGT+GGG | - | chr7.1:3191772-3191791 | MS.gene050898:intron | 45.0% | |
GATCTGGGGAGCAAAACAAT+TGG | - | chr7.1:3196261-3196280 | MS.gene050898:intron | 45.0% | |
GCAAATGCTGCTGCTAAAGT+TGG | - | chr7.1:3192725-3192744 | MS.gene050898:intron | 45.0% | |
GCAAGATGGAAGGACATTTG+AGG | - | chr7.1:3194170-3194189 | MS.gene050898:intron | 45.0% | |
GGCAAGCAAGCTACTATACA+AGG | + | chr7.1:3193938-3193957 | None:intergenic | 45.0% | |
GGCACAAAAGGTTCATCCAA+AGG | - | chr7.1:3192968-3192987 | MS.gene050898:intron | 45.0% | |
GTTATCTGCTTGTATGGCAC+AGG | - | chr7.1:3194700-3194719 | MS.gene050898:CDS | 45.0% | |
GTTGACCTCACCTAAAGGTT+TGG | + | chr7.1:3193464-3193483 | None:intergenic | 45.0% | |
TACCTCCTTCATGCTTTCCA+CGG | + | chr7.1:3196161-3196180 | None:intergenic | 45.0% | |
TACTGTTCTTGCTTGGTCTG+TGG | - | chr7.1:3193213-3193232 | MS.gene050898:intron | 45.0% | |
TAGGGTGGCTTAAGATCTGA+TGG | - | chr7.1:3193254-3193273 | MS.gene050898:intron | 45.0% | |
TCCTTAGACATGTCCGAAGA+AGG | + | chr7.1:3192641-3192660 | None:intergenic | 45.0% | |
TCCTTCTTCGGACATGTCTA+AGG | - | chr7.1:3192637-3192656 | MS.gene050898:intron | 45.0% | |
TGAATTTGATGGAAAGCCCG+TGG | - | chr7.1:3196141-3196160 | MS.gene050898:intron | 45.0% | |
TGAGAATTCTTATTGGGCCG+TGG | - | chr7.1:3191771-3191790 | MS.gene050898:intron | 45.0% | |
TGGCTGTAAAAGATGTCTCC+TGG | - | chr7.1:3194387-3194406 | MS.gene050898:intron | 45.0% | |
TGGGTAGTTTATGCGGGAAA+AGG | + | chr7.1:3194630-3194649 | None:intergenic | 45.0% | |
TGGTCGAAAGACGACAAATG+TGG | + | chr7.1:3192470-3192489 | None:intergenic | 45.0% | |
TGTATGACTCAAAGCTAGGG+TGG | - | chr7.1:3193239-3193258 | MS.gene050898:intron | 45.0% | |
TGTATGGCACAGGGAAATTC+TGG | - | chr7.1:3194710-3194729 | MS.gene050898:CDS | 45.0% | |
TTGTCGTCTTTCGACCAACA+TGG | - | chr7.1:3192473-3192492 | MS.gene050898:CDS | 45.0% | |
! | AGCTTGCTTGCCAGAACAAT+TGG | - | chr7.1:3193888-3193907 | MS.gene050898:intron | 45.0% |
! | AGTAGTTTTCTCCGCAGCAA+CGG | + | chr7.1:3191397-3191416 | None:intergenic | 45.0% |
! | CATTGTGTTGCTCAAATGCG+AGG | - | chr7.1:3196000-3196019 | MS.gene050898:intron | 45.0% |
! | GAAGTGCTACTGTTCTTGCT+TGG | - | chr7.1:3193206-3193225 | MS.gene050898:intron | 45.0% |
! | TATGATAGTGAAGCCATGGG+CGG | - | chr7.1:3195494-3195513 | MS.gene050898:intron | 45.0% |
!! | ATGAAAGTGTTGGCTGCTGA+TGG | - | chr7.1:3194779-3194798 | MS.gene050898:CDS | 45.0% |
!! | TGAAAGTGTTGGCTGCTGAT+GGG | - | chr7.1:3194780-3194799 | MS.gene050898:CDS | 45.0% |
AACGATACCCACAGCTCCAA+CGG | + | chr7.1:3192056-3192075 | None:intergenic | 50.0% | |
AAGCTTTGCTTCCGGAAGTG+GGG | + | chr7.1:3194256-3194275 | None:intergenic | 50.0% | |
ACCTCCTTCATGCTTTCCAC+GGG | + | chr7.1:3196160-3196179 | None:intergenic | 50.0% | |
AGCGAGATATTCGAGAACGG+CGG | + | chr7.1:3191109-3191128 | None:intergenic | 50.0% | |
ATGGCACAGGGAAATTCTGG+AGG | - | chr7.1:3194713-3194732 | MS.gene050898:CDS | 50.0% | |
ATGGCTATTACCCAATCCCC+GGG | + | chr7.1:3194300-3194319 | None:intergenic | 50.0% | |
CAAGCTTTGCTTCCGGAAGT+GGG | + | chr7.1:3194257-3194276 | None:intergenic | 50.0% | |
CACCGAAAAGGTTGTGACAG+TGG | - | chr7.1:3191845-3191864 | MS.gene050898:intron | 50.0% | |
CATCATCGTTCCTCACAGCA+AGG | + | chr7.1:3191290-3191309 | None:intergenic | 50.0% | |
CATGGCTATTACCCAATCCC+CGG | + | chr7.1:3194301-3194320 | None:intergenic | 50.0% | |
GACATGTCCGAAGAAGGAAC+AGG | + | chr7.1:3192635-3192654 | None:intergenic | 50.0% | |
GCCAAAGAAAACCGTTGCTG+CGG | - | chr7.1:3191383-3191402 | MS.gene050898:intron | 50.0% | |
GGGCCACTTGTCAATATGGA+TGG | - | chr7.1:3194734-3194753 | MS.gene050898:CDS | 50.0% | |
GGGGATTGGGTAATAGCCAT+GGG | - | chr7.1:3194300-3194319 | MS.gene050898:intron | 50.0% | |
GTAGAAGTTTGAACCGCCCA+TGG | + | chr7.1:3195510-3195529 | None:intergenic | 50.0% | |
TAGGAACGTTCGTACGTGTG+CGG | - | chr7.1:3192381-3192400 | MS.gene050898:intron | 50.0% | |
TCTCGAATATCTCGCTGCTG+AGG | - | chr7.1:3191113-3191132 | MS.gene050898:CDS | 50.0% | |
TCTTCAACTAGGCTTCGTCC+CGG | - | chr7.1:3194279-3194298 | MS.gene050898:intron | 50.0% | |
TGGAGGGCCACTTGTCAATA+TGG | - | chr7.1:3194730-3194749 | MS.gene050898:CDS | 50.0% | |
TGGCACAGGGAAATTCTGGA+GGG | - | chr7.1:3194714-3194733 | MS.gene050898:CDS | 50.0% | |
TTGAACAGAAGCTCTGCCGT+TGG | - | chr7.1:3192037-3192056 | MS.gene050898:intron | 50.0% | |
! | AAAGCCCGTGGAAAGCATGA+AGG | - | chr7.1:3196153-3196172 | MS.gene050898:intron | 50.0% |
! | AGCTTGCTTGCCGGATCAAT+TGG | - | chr7.1:3193946-3193965 | MS.gene050898:intron | 50.0% |
! | TATTCTCAGCGTGTTGGCAC+TGG | - | chr7.1:3191066-3191085 | MS.gene050898:CDS | 50.0% |
! | TCCGCAGCAACGGTTTTCTT+TGG | + | chr7.1:3191387-3191406 | None:intergenic | 50.0% |
!! | ACAGGGAAGAGTATTGGCTC+TGG | - | chr7.1:3192884-3192903 | MS.gene050898:CDS | 50.0% |
!!! | GGGGGTTTTGAACACCGAAA+AGG | - | chr7.1:3191833-3191852 | MS.gene050898:intron | 50.0% |
AAGGGAATGCGGACAACCCA+TGG | + | chr7.1:3194319-3194338 | None:intergenic | 55.0% | |
ACAGCAAGGCACACGTGTCT+AGG | + | chr7.1:3191276-3191295 | None:intergenic | 55.0% | |
AGAGTGATACGGCCATGGCT+TGG | - | chr7.1:3195155-3195174 | MS.gene050898:intron | 55.0% | |
CAGCAAGGCACACGTGTCTA+GGG | + | chr7.1:3191275-3191294 | None:intergenic | 55.0% | |
CCAAGCTTTGCTTCCGGAAG+TGG | + | chr7.1:3194258-3194277 | None:intergenic | 55.0% | |
CCACTTCCGGAAGCAAAGCT+TGG | - | chr7.1:3194255-3194274 | MS.gene050898:intron | 55.0% | |
CGGGGATTGGGTAATAGCCA+TGG | - | chr7.1:3194299-3194318 | MS.gene050898:intron | 55.0% | |
CTTCAACTAGGCTTCGTCCC+GGG | - | chr7.1:3194280-3194299 | MS.gene050898:intron | 55.0% | |
GGTCGCTATTCTCAGCGTGT+TGG | - | chr7.1:3191060-3191079 | MS.gene050898:CDS | 55.0% | |
GGTGTGACAATTGCTAGCGG+TGG | - | chr7.1:3191330-3191349 | MS.gene050898:intron | 55.0% | |
TCAGGAGAGTGATACGGCCA+TGG | - | chr7.1:3195150-3195169 | MS.gene050898:intron | 55.0% | |
TTCAACTAGGCTTCGTCCCG+GGG | - | chr7.1:3194281-3194300 | MS.gene050898:intron | 55.0% | |
! | CAAAGTTGGGGTGCCCATGA+AGG | - | chr7.1:3196532-3196551 | MS.gene050898:intron | 55.0% |
! | GCTGTGGGTATCGTTGCTGT+TGG | - | chr7.1:3192061-3192080 | MS.gene050898:intron | 55.0% |
!! | AGTGTTGGCTGCTGATGGGT+TGG | - | chr7.1:3194784-3194803 | MS.gene050898:CDS | 55.0% |
!! | GTGTTGGCTGCTGATGGGTT+GGG | - | chr7.1:3194785-3194804 | MS.gene050898:CDS | 55.0% |
AAGCTCTGCCGTTGGAGCTG+TGG | - | chr7.1:3192045-3192064 | MS.gene050898:intron | 60.0% | |
AGAACGGCGGCGAGGTAGAT+CGG | + | chr7.1:3191096-3191115 | None:intergenic | 60.0% | |
AGCTCTGCCGTTGGAGCTGT+GGG | - | chr7.1:3192046-3192065 | MS.gene050898:intron | 60.0% | |
GAACCCAGCACGATCACCAG+GGG | + | chr7.1:3196101-3196120 | None:intergenic | 60.0% | |
GATATTCGAGAACGGCGGCG+AGG | + | chr7.1:3191104-3191123 | None:intergenic | 60.0% | |
GGAACCCAGCACGATCACCA+GGG | + | chr7.1:3196102-3196121 | None:intergenic | 60.0% | |
TAGGCTTCGTCCCGGGGATT+GGG | - | chr7.1:3194287-3194306 | MS.gene050898:intron | 60.0% | |
TAGGTAACTCCTGGGTCCCC+TGG | - | chr7.1:3196082-3196101 | MS.gene050898:intron | 60.0% | |
! | GACACGTGTGCCTTGCTGTG+AGG | - | chr7.1:3191277-3191296 | MS.gene050898:intron | 60.0% |
! | GCCCGTGGAAAGCATGAAGG+AGG | - | chr7.1:3196156-3196175 | MS.gene050898:intron | 60.0% |
CGGAACCCAGCACGATCACC+AGG | + | chr7.1:3196103-3196122 | None:intergenic | 65.0% | |
CTAGGCTTCGTCCCGGGGAT+TGG | - | chr7.1:3194286-3194305 | MS.gene050898:intron | 65.0% | |
GATCGTGCTGGGTTCCGTCC+TGG | - | chr7.1:3196106-3196125 | MS.gene050898:intron | 65.0% | |
GGTCCCCTGGTGATCGTGCT+GGG | - | chr7.1:3196095-3196114 | MS.gene050898:intron | 65.0% | |
GCACGATCACCAGGGGACCC+AGG | + | chr7.1:3196094-3196113 | None:intergenic | 70.0% | |
GGGTCCCCTGGTGATCGTGC+TGG | - | chr7.1:3196094-3196113 | MS.gene050898:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.1 | gene | 3191051 | 3196628 | 3191051 | ID=MS.gene050898 |
chr7.1 | mRNA | 3191051 | 3196628 | 3191051 | ID=MS.gene050898.t1;Parent=MS.gene050898 |
chr7.1 | exon | 3196545 | 3196628 | 3196545 | ID=MS.gene050898.t1.exon1;Parent=MS.gene050898.t1 |
chr7.1 | CDS | 3196545 | 3196628 | 3196545 | ID=cds.MS.gene050898.t1;Parent=MS.gene050898.t1 |
chr7.1 | exon | 3195558 | 3195657 | 3195558 | ID=MS.gene050898.t1.exon2;Parent=MS.gene050898.t1 |
chr7.1 | CDS | 3195558 | 3195657 | 3195558 | ID=cds.MS.gene050898.t1;Parent=MS.gene050898.t1 |
chr7.1 | exon | 3195185 | 3195295 | 3195185 | ID=MS.gene050898.t1.exon3;Parent=MS.gene050898.t1 |
chr7.1 | CDS | 3195185 | 3195295 | 3195185 | ID=cds.MS.gene050898.t1;Parent=MS.gene050898.t1 |
chr7.1 | exon | 3194900 | 3195079 | 3194900 | ID=MS.gene050898.t1.exon4;Parent=MS.gene050898.t1 |
chr7.1 | CDS | 3194900 | 3195079 | 3194900 | ID=cds.MS.gene050898.t1;Parent=MS.gene050898.t1 |
chr7.1 | exon | 3194685 | 3194812 | 3194685 | ID=MS.gene050898.t1.exon5;Parent=MS.gene050898.t1 |
chr7.1 | CDS | 3194685 | 3194812 | 3194685 | ID=cds.MS.gene050898.t1;Parent=MS.gene050898.t1 |
chr7.1 | exon | 3193312 | 3193523 | 3193312 | ID=MS.gene050898.t1.exon6;Parent=MS.gene050898.t1 |
chr7.1 | CDS | 3193312 | 3193523 | 3193312 | ID=cds.MS.gene050898.t1;Parent=MS.gene050898.t1 |
chr7.1 | exon | 3193069 | 3193150 | 3193069 | ID=MS.gene050898.t1.exon7;Parent=MS.gene050898.t1 |
chr7.1 | CDS | 3193069 | 3193150 | 3193069 | ID=cds.MS.gene050898.t1;Parent=MS.gene050898.t1 |
chr7.1 | exon | 3192815 | 3192957 | 3192815 | ID=MS.gene050898.t1.exon8;Parent=MS.gene050898.t1 |
chr7.1 | CDS | 3192815 | 3192957 | 3192815 | ID=cds.MS.gene050898.t1;Parent=MS.gene050898.t1 |
chr7.1 | exon | 3192405 | 3192525 | 3192405 | ID=MS.gene050898.t1.exon9;Parent=MS.gene050898.t1 |
chr7.1 | CDS | 3192405 | 3192525 | 3192405 | ID=cds.MS.gene050898.t1;Parent=MS.gene050898.t1 |
chr7.1 | exon | 3191502 | 3191594 | 3191502 | ID=MS.gene050898.t1.exon10;Parent=MS.gene050898.t1 |
chr7.1 | CDS | 3191502 | 3191594 | 3191502 | ID=cds.MS.gene050898.t1;Parent=MS.gene050898.t1 |
chr7.1 | exon | 3191051 | 3191167 | 3191051 | ID=MS.gene050898.t1.exon11;Parent=MS.gene050898.t1 |
chr7.1 | CDS | 3191051 | 3191167 | 3191051 | ID=cds.MS.gene050898.t1;Parent=MS.gene050898.t1 |
Gene Sequence |
Protein sequence |