Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene23109.t1 | XP_003626259.1 | 97 | 428 | 13 | 0 | 29 | 456 | 6 | 433 | 2.30E-234 | 821.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene23109.t1 | Q3E6S8 | 61.9 | 425 | 143 | 6 | 36 | 453 | 14 | 426 | 1.3e-140 | 501.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene23109.t1 | A2Q336 | 97.0 | 428 | 13 | 0 | 29 | 456 | 6 | 433 | 1.7e-234 | 821.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene050898 | MS.gene23109 | 0.888155 | 7.58E-73 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene67376 | MS.gene23109 | PPI |
MS.gene23109 | MS.gene021049 | PPI |
MS.gene004101 | MS.gene23109 | PPI |
MS.gene23109 | MS.gene036453 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene23109.t1 | MTR_7g113170 | 96.963 | 428 | 13 | 0 | 29 | 456 | 6 | 433 | 0.0 | 839 |
MS.gene23109.t1 | MTR_7g113170 | 96.936 | 359 | 11 | 0 | 29 | 387 | 6 | 364 | 0.0 | 706 |
MS.gene23109.t1 | MTR_6g007030 | 30.293 | 307 | 170 | 10 | 151 | 436 | 128 | 411 | 8.00e-32 | 126 |
MS.gene23109.t1 | MTR_6g011810 | 28.571 | 308 | 182 | 10 | 170 | 453 | 165 | 458 | 4.01e-30 | 122 |
MS.gene23109.t1 | MTR_2g019140 | 35.519 | 183 | 108 | 5 | 170 | 343 | 133 | 314 | 3.68e-22 | 97.4 |
MS.gene23109.t1 | MTR_5g464730 | 29.740 | 269 | 145 | 7 | 201 | 439 | 93 | 347 | 2.41e-20 | 92.8 |
MS.gene23109.t1 | MTR_5g064160 | 27.046 | 281 | 160 | 7 | 190 | 439 | 102 | 368 | 3.22e-19 | 89.7 |
MS.gene23109.t1 | MTR_5g064160 | 27.143 | 280 | 159 | 7 | 190 | 438 | 137 | 402 | 4.41e-19 | 89.7 |
MS.gene23109.t1 | MTR_7g113160 | 100.000 | 28 | 0 | 0 | 1 | 28 | 46 | 73 | 5.07e-11 | 60.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene23109.t1 | AT5G27660 | 62.824 | 425 | 145 | 5 | 36 | 453 | 14 | 432 | 0.0 | 526 |
MS.gene23109.t1 | AT5G27660 | 61.882 | 425 | 143 | 6 | 36 | 453 | 9 | 421 | 1.41e-180 | 511 |
MS.gene23109.t1 | AT3G27925 | 31.193 | 327 | 178 | 11 | 151 | 452 | 135 | 439 | 1.62e-33 | 131 |
MS.gene23109.t1 | AT3G27925 | 31.193 | 327 | 178 | 11 | 151 | 452 | 135 | 439 | 1.62e-33 | 131 |
MS.gene23109.t1 | AT5G39830 | 29.545 | 308 | 179 | 10 | 170 | 453 | 155 | 448 | 5.09e-31 | 124 |
MS.gene23109.t1 | AT5G39830 | 28.525 | 305 | 172 | 10 | 170 | 453 | 155 | 434 | 9.34e-27 | 112 |
MS.gene23109.t1 | AT4G18370 | 36.458 | 192 | 110 | 6 | 170 | 351 | 131 | 320 | 2.53e-21 | 94.7 |
Find 135 sgRNAs with CRISPR-Local
Find 346 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTCATTCCCTAATGTCAATA+AGG | 0.269170 | 7.2:-3955929 | MS.gene23109:CDS |
TGTATGGCACAGGGAAATTC+TGG | 0.299439 | 7.2:-3956454 | MS.gene23109:intron |
TCCTTCTTCGGACATGTCTA+AGG | 0.309122 | 7.2:-3958527 | MS.gene23109:CDS |
ATTGGCTTTGTAGATTTCTA+TGG | 0.309418 | 7.2:-3958310 | MS.gene23109:intron |
TGGAGGGCCACTTGTCAATA+TGG | 0.315113 | 7.2:-3956434 | MS.gene23109:CDS |
CTAGGCTTCGTCCCGGGGAT+TGG | 0.328014 | 7.2:-3956878 | MS.gene23109:CDS |
TGACCGTAAAAGCAGTGATT+TGG | 0.333135 | 7.2:-3956629 | MS.gene23109:CDS |
TGCGACTTTAACTGTGATTC+CGG | 0.336668 | 7.2:-3954581 | MS.gene23109:CDS |
AGAATGCCCTTATTGACATT+AGG | 0.346180 | 7.2:+3955922 | None:intergenic |
GGGTCCCCTGGTGATCGTGC+TGG | 0.357975 | 7.2:-3955070 | MS.gene23109:CDS |
GAATGCCCTTATTGACATTA+GGG | 0.359755 | 7.2:+3955923 | None:intergenic |
AAGCCATCTAAGGATACTTT+TGG | 0.364970 | 7.2:-3958475 | MS.gene23109:CDS |
GACCGTAAAAGCAGTGATTT+GGG | 0.371160 | 7.2:-3956628 | MS.gene23109:CDS |
GACATGTCTAAGGAAACTTC+TGG | 0.371904 | 7.2:-3958517 | MS.gene23109:CDS |
ATCTGTTTGTAAATACTCTC+TGG | 0.378364 | 7.2:+3956591 | None:intergenic |
TGATGAATCAAAGCCATCTA+AGG | 0.379781 | 7.2:-3958485 | MS.gene23109:CDS |
AGCAGTGATTTGGGATTTAG+TGG | 0.380979 | 7.2:-3956619 | MS.gene23109:CDS |
GATGTTGTCATTGAATTTGA+TGG | 0.389841 | 7.2:-3955034 | MS.gene23109:CDS |
AGTTAGCCCTGTTCCTTCTT+CGG | 0.392277 | 7.2:-3958539 | MS.gene23109:CDS |
TTGAACACAAACCTTCCCTT+TGG | 0.396372 | 7.2:+3958180 | None:intergenic |
AAATGATGGTGGACAAAGTT+GGG | 0.397529 | 7.2:-3954645 | MS.gene23109:CDS |
TAGGCTTCGTCCCGGGGATT+GGG | 0.404252 | 7.2:-3956877 | MS.gene23109:CDS |
CAAAGCTTGGTTCTTCAACT+AGG | 0.415056 | 7.2:-3956896 | MS.gene23109:CDS |
CCAAGCTTTGCTTCCGGAAG+TGG | 0.420101 | 7.2:+3956909 | None:intergenic |
AAATTCTGAAACCCCACTTC+CGG | 0.423531 | 7.2:-3956922 | MS.gene23109:CDS |
CAAGATGGAAGGACATTTGA+GGG | 0.423591 | 7.2:-3956993 | MS.gene23109:CDS |
CTTCAACTAGGCTTCGTCCC+GGG | 0.427401 | 7.2:-3956884 | MS.gene23109:CDS |
CGGAACCCAGCACGATCACC+AGG | 0.431496 | 7.2:+3955064 | None:intergenic |
TGCCATTGCAAGATATATCA+TGG | 0.437451 | 7.2:-3958750 | MS.gene23109:CDS |
CTACCAAAAGTATCCTTAGA+TGG | 0.439534 | 7.2:+3958472 | None:intergenic |
TCATTCCCTAATGTCAATAA+GGG | 0.444524 | 7.2:-3955928 | MS.gene23109:CDS |
GGAATCCAATCTCAGCTTGT+AGG | 0.450834 | 7.2:-3954557 | None:intergenic |
TATTCTCAGCGTGTTGGCAC+TGG | 0.452088 | 7.2:-3960100 | MS.gene23109:CDS |
AGTCTCCTACAAGCTGAGAT+TGG | 0.457251 | 7.2:+3954552 | None:intergenic |
GGTCCCCTGGTGATCGTGCT+GGG | 0.461837 | 7.2:-3955069 | MS.gene23109:CDS |
ACTGGAATTAGTGTGGTTAT+CGG | 0.462039 | 7.2:+3959060 | None:intergenic |
ACATGTCTAAGGAAACTTCT+GGG | 0.469601 | 7.2:-3958516 | MS.gene23109:CDS |
GAAGAACCAAGCTTTGCTTC+CGG | 0.472595 | 7.2:+3956903 | None:intergenic |
GTGGACGTAACAAATCAAAC+GGG | 0.472824 | 7.2:+3958713 | None:intergenic |
TTTGCTACAGGGAAGAGTAT+TGG | 0.475530 | 7.2:-3958286 | MS.gene23109:CDS |
GTTGCAGGTTATTGAAATGA+TGG | 0.475950 | 7.2:-3954659 | MS.gene23109:intron |
TAGGTAACTCCTGGGTCCCC+TGG | 0.475953 | 7.2:-3955082 | MS.gene23109:CDS |
AGTGTTGGCTGCTGATGGGT+TGG | 0.476294 | 7.2:-3956380 | MS.gene23109:CDS |
TCCTTAGACATGTCCGAAGA+AGG | 0.477491 | 7.2:+3958526 | None:intergenic |
ATAGAGCATTTCAAGAAAAG+TGG | 0.478194 | 7.2:-3956322 | MS.gene23109:CDS |
TGTGGACGTAACAAATCAAA+CGG | 0.478244 | 7.2:+3958712 | None:intergenic |
GTGTTGGCTGCTGATGGGTT+GGG | 0.482417 | 7.2:-3956379 | MS.gene23109:CDS |
GACATGTCCGAAGAAGGAAC+AGG | 0.489693 | 7.2:+3958532 | None:intergenic |
TACCTCCTTCATGCTTTCCA+CGG | 0.491263 | 7.2:+3955006 | None:intergenic |
CAAGCTTTGCTTCCGGAAGT+GGG | 0.491393 | 7.2:+3956910 | None:intergenic |
AGCTCTGCCGTTGGAGCTGT+GGG | 0.496151 | 7.2:-3959115 | MS.gene23109:CDS |
GATCGTGCTGGGTTCCGTCC+TGG | 0.498642 | 7.2:-3955058 | MS.gene23109:CDS |
GCAAGATGGAAGGACATTTG+AGG | 0.500220 | 7.2:-3956994 | MS.gene23109:CDS |
ATTGAAGTCACTTTGCAAGA+TGG | 0.504105 | 7.2:-3957008 | MS.gene23109:CDS |
CGGGGATTGGGTAATAGCCA+TGG | 0.506433 | 7.2:-3956865 | MS.gene23109:CDS |
ATCGAAATATTAACAACAGC+AGG | 0.506520 | 7.2:+3958415 | None:intergenic |
CCACTTCCGGAAGCAAAGCT+TGG | 0.510741 | 7.2:-3956909 | MS.gene23109:CDS |
AAGGACATTTGAGGGGAAAG+TGG | 0.512120 | 7.2:-3956985 | MS.gene23109:CDS |
AGAGTGATACGGCCATGGCT+TGG | 0.514213 | 7.2:-3956009 | MS.gene23109:CDS |
GGAACAATCATTAACAAAGA+TGG | 0.515974 | 7.2:-3958259 | MS.gene23109:CDS |
ATGAAAGTGTTGGCTGCTGA+TGG | 0.519245 | 7.2:-3956385 | MS.gene23109:CDS |
AGAACGGCGGCGAGGTAGAT+CGG | 0.519256 | 7.2:+3960073 | None:intergenic |
TTCAACTAGGCTTCGTCCCG+GGG | 0.519860 | 7.2:-3956883 | MS.gene23109:CDS |
AAGCTCTGCCGTTGGAGCTG+TGG | 0.521174 | 7.2:-3959116 | MS.gene23109:CDS |
GCAAATGCTGCTGCTAAAGT+TGG | 0.521599 | 7.2:-3958439 | MS.gene23109:CDS |
GAAATGATGGTGGACAAAGT+TGG | 0.526009 | 7.2:-3954646 | MS.gene23109:CDS |
ACCTCCTTCATGCTTTCCAC+GGG | 0.531605 | 7.2:+3955007 | None:intergenic |
GCACAAAAGGTTCATCCAAA+GGG | 0.534147 | 7.2:-3958195 | MS.gene23109:CDS |
CATGAAAATCAACGACAACA+TGG | 0.539853 | 7.2:+3958218 | None:intergenic |
TCTTCAACTAGGCTTCGTCC+CGG | 0.539957 | 7.2:-3956885 | MS.gene23109:CDS |
TCAGGAGAGTGATACGGCCA+TGG | 0.540162 | 7.2:-3956014 | MS.gene23109:intron |
ACAGGGAAGAGTATTGGCTC+TGG | 0.541432 | 7.2:-3958280 | MS.gene23109:CDS |
CTGTCACTGCTGGTATTGTA+AGG | 0.545354 | 7.2:-3956818 | MS.gene23109:intron |
CATGGCTATTACCCAATCCC+CGG | 0.547015 | 7.2:+3956866 | None:intergenic |
AAGGGAATGCGGACAACCCA+TGG | 0.551296 | 7.2:+3956848 | None:intergenic |
GGCACAAAAGGTTCATCCAA+AGG | 0.554675 | 7.2:-3958196 | MS.gene23109:CDS |
TAAGGGCATTCTTGTACCAA+TGG | 0.554993 | 7.2:-3955911 | MS.gene23109:intron |
TTGAACAGAAGCTCTGCCGT+TGG | 0.555512 | 7.2:-3959124 | MS.gene23109:CDS |
ATAGCTAGGTTCATGAAGAA+AGG | 0.556055 | 7.2:-3960127 | None:intergenic |
GGGCCACTTGTCAATATGGA+TGG | 0.558327 | 7.2:-3956430 | MS.gene23109:CDS |
CTTCAGAATACTGTCACTGC+TGG | 0.562372 | 7.2:-3956828 | MS.gene23109:CDS |
TAGAGCATTTCAAGAAAAGT+GGG | 0.563537 | 7.2:-3956321 | MS.gene23109:intron |
ACACACAGAGTCGATTGGTA+CGG | 0.565045 | 7.2:+3956351 | None:intergenic |
AGATATATCATGGTTGACAT+TGG | 0.565755 | 7.2:-3958740 | MS.gene23109:CDS |
AACCATGATATATCTTGCAA+TGG | 0.566757 | 7.2:+3958748 | None:intergenic |
GATATATCTTGCAATGGCAA+AGG | 0.570631 | 7.2:+3958754 | None:intergenic |
CAGCAGTGACAGTATTCTGA+AGG | 0.571751 | 7.2:+3956829 | None:intergenic |
TAGGAACGTTCGTACGTGTG+CGG | 0.573882 | 7.2:-3958780 | MS.gene23109:CDS |
AATATGGATGGAGAAATTGT+TGG | 0.576439 | 7.2:-3956418 | MS.gene23109:CDS |
TCTGTTTGTAAATACTCTCT+GGG | 0.577942 | 7.2:+3956592 | None:intergenic |
AACGATACCCACAGCTCCAA+CGG | 0.578717 | 7.2:+3959108 | None:intergenic |
GCTGTGGGTATCGTTGCTGT+TGG | 0.578767 | 7.2:-3959100 | MS.gene23109:CDS |
AAGCTGAGATTGGATTCCTC+CGG | 0.580230 | 7.2:+3954562 | None:intergenic |
TCTCGAATATCTCGCTGCTG+AGG | 0.581328 | 7.2:-3960053 | MS.gene23109:intron |
AAGTCACTTTGCAAGATGGA+AGG | 0.582092 | 7.2:-3957004 | MS.gene23109:CDS |
GGGGATTGGGTAATAGCCAT+GGG | 0.587526 | 7.2:-3956864 | MS.gene23109:CDS |
ATGAAAATCAACGACAACAT+GGG | 0.587711 | 7.2:+3958219 | None:intergenic |
AAAAGGTTCATCCAAAGGGA+AGG | 0.590674 | 7.2:-3958191 | MS.gene23109:intron |
ATGGCTATTACCCAATCCCC+GGG | 0.595774 | 7.2:+3956867 | None:intergenic |
TGAAAGTGTTGGCTGCTGAT+GGG | 0.600081 | 7.2:-3956384 | MS.gene23109:CDS |
GAACCCAGCACGATCACCAG+GGG | 0.600193 | 7.2:+3955066 | None:intergenic |
GCACGATCACCAGGGGACCC+AGG | 0.601429 | 7.2:+3955073 | None:intergenic |
ATTGCTCACTGGAATTAGTG+TGG | 0.602326 | 7.2:+3959053 | None:intergenic |
TCTCCATCCATATTGACAAG+TGG | 0.603386 | 7.2:+3956427 | None:intergenic |
CAAAGTTGGGGTGCCCATGA+AGG | 0.604534 | 7.2:-3954632 | MS.gene23109:CDS |
AACAGATTGTGCAATTAATG+TGG | 0.605597 | 7.2:-3956575 | MS.gene23109:intron |
CATGTCTAAGGAAACTTCTG+GGG | 0.608468 | 7.2:-3958515 | MS.gene23109:CDS |
TGAATTTGATGGAAAGCCCG+TGG | 0.609844 | 7.2:-3955023 | MS.gene23109:CDS |
TGGTCGAAAGACGACAAATG+TGG | 0.613228 | 7.2:+3958694 | None:intergenic |
AAAGCCCGTGGAAAGCATGA+AGG | 0.616163 | 7.2:-3955011 | MS.gene23109:CDS |
GGTCGCTATTCTCAGCGTGT+TGG | 0.618289 | 7.2:-3960106 | MS.gene23109:CDS |
AAGCTTTGCTTCCGGAAGTG+GGG | 0.621714 | 7.2:+3956911 | None:intergenic |
TTGTCGTCTTTCGACCAACA+TGG | 0.625198 | 7.2:-3958688 | MS.gene23109:intron |
AATTCAATGACAACATCACC+AGG | 0.627515 | 7.2:+3955040 | None:intergenic |
AGCATTCTTAGTCCAAGCCA+TGG | 0.630955 | 7.2:+3955997 | None:intergenic |
AGCAGTGACAGTATTCTGAA+GGG | 0.641778 | 7.2:+3956830 | None:intergenic |
GTTAATATTTCGATTCCACA+AGG | 0.645580 | 7.2:-3958406 | MS.gene23109:intron |
AGAAAGAGGACAAACCATGT+TGG | 0.646314 | 7.2:+3958674 | None:intergenic |
GGAACCCAGCACGATCACCA+GGG | 0.647337 | 7.2:+3955065 | None:intergenic |
GACTTTAACTGTGATTCCGG+AGG | 0.651382 | 7.2:-3954578 | MS.gene23109:CDS |
ACAGTATTCTGAAGGGAATG+CGG | 0.654266 | 7.2:+3956837 | None:intergenic |
ATGGCACAGGGAAATTCTGG+AGG | 0.659592 | 7.2:-3956451 | MS.gene23109:intron |
CAATGACAACATCACCAGGA+CGG | 0.663393 | 7.2:+3955044 | None:intergenic |
GCCCGTGGAAAGCATGAAGG+AGG | 0.665398 | 7.2:-3955008 | MS.gene23109:intron |
GCAGGTTATTGAAATGATGG+TGG | 0.673889 | 7.2:-3954656 | MS.gene23109:intron |
AGCAGCGAGATATTCGAGAA+CGG | 0.674031 | 7.2:+3960057 | None:intergenic |
AGTGAACATCATGAAAGTGT+TGG | 0.676552 | 7.2:-3956395 | MS.gene23109:CDS |
ACATGTCCGAAGAAGGAACA+GGG | 0.682454 | 7.2:+3958533 | None:intergenic |
TGGCACAGGGAAATTCTGGA+GGG | 0.686679 | 7.2:-3956450 | MS.gene23109:intron |
AAGATGGAAGGACATTTGAG+GGG | 0.693003 | 7.2:-3956992 | MS.gene23109:CDS |
GATATTCGAGAACGGCGGCG+AGG | 0.697780 | 7.2:+3960065 | None:intergenic |
AATGATGGTGGACAAAGTTG+GGG | 0.709009 | 7.2:-3954644 | MS.gene23109:CDS |
ATGTCTAAGGAAACTTCTGG+GGG | 0.710738 | 7.2:-3958514 | MS.gene23109:CDS |
AGCGAGATATTCGAGAACGG+CGG | 0.714587 | 7.2:+3960060 | None:intergenic |
TGGACGTAACAAATCAAACG+GGG | 0.745894 | 7.2:+3958714 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AATTTAAAGTAAAAGAAAAT+AGG | + | chr7.2:3957928-3957947 | None:intergenic | 10.0% |
!!! | TTTGTAATTAATTAATGTTT+TGG | - | chr7.2:3954686-3954705 | MS.gene23109:intron | 10.0% |
!!! | TTTTTTTATAACAATAACAA+CGG | - | chr7.2:3959328-3959347 | MS.gene23109:intron | 10.0% |
!! | AAGATAAAATAAAATGATCT+GGG | - | chr7.2:3959755-3959774 | MS.gene23109:intron | 15.0% |
!! | TAAGATAAAATAAAATGATC+TGG | - | chr7.2:3959754-3959773 | MS.gene23109:intron | 15.0% |
!! | TAATCTTGAAATAAAGTTAA+TGG | - | chr7.2:3955669-3955688 | MS.gene23109:intron | 15.0% |
!!! | GTTTATTTAGAATTAATGAA+CGG | - | chr7.2:3955190-3955209 | MS.gene23109:intron | 15.0% |
!!! | TATTTTCAGAATAATTTTCT+AGG | + | chr7.2:3959097-3959116 | None:intergenic | 15.0% |
!! | AAAATTACACAAAACATAAG+CGG | + | chr7.2:3959408-3959427 | None:intergenic | 20.0% |
!! | AAGAAATATATCTTGAATTG+TGG | + | chr7.2:3957040-3957059 | None:intergenic | 20.0% |
!! | AATAATCAATTCATCTAACA+TGG | - | chr7.2:3955861-3955880 | MS.gene23109:intron | 20.0% |
!! | AGATAAAATAAAATGATCTG+GGG | - | chr7.2:3959756-3959775 | MS.gene23109:intron | 20.0% |
!! | ATGCGAAATTCATAATTAAT+CGG | - | chr7.2:3954661-3954680 | MS.gene23109:intron | 20.0% |
!! | CAAACTTATACTAATCTTTA+GGG | - | chr7.2:3959824-3959843 | MS.gene23109:intron | 20.0% |
!! | GATCATAATATATCCATAAA+AGG | + | chr7.2:3958541-3958560 | None:intergenic | 20.0% |
!! | TATTGATATTCTTATGTTGT+AGG | - | chr7.2:3957421-3957440 | MS.gene23109:intron | 20.0% |
!! | TGTTAAATCTAACATTGAAA+TGG | + | chr7.2:3957954-3957973 | None:intergenic | 20.0% |
!!! | AAATTTAAACGTTTTTGACT+AGG | - | chr7.2:3959572-3959591 | MS.gene23109:intron | 20.0% |
!!! | AGTAAACTTTTTTTCTTTTC+AGG | - | chr7.2:3958641-3958660 | MS.gene23109:intron | 20.0% |
!!! | ATTTAGAACTGAAAATTTGT+AGG | - | chr7.2:3956087-3956106 | MS.gene23109:intron | 20.0% |
!!! | CTGATTTTTTAAATGTCTTT+TGG | - | chr7.2:3957978-3957997 | MS.gene23109:intron | 20.0% |
!!! | TTCATGTATTGTATGATTTT+TGG | - | chr7.2:3958010-3958029 | MS.gene23109:intron | 20.0% |
!!! | TTTAGAACTGAAAATTTGTA+GGG | - | chr7.2:3956088-3956107 | MS.gene23109:intron | 20.0% |
! | AAAGAAAATAGGTTAAAACC+AGG | + | chr7.2:3957917-3957936 | None:intergenic | 25.0% |
! | AATTCAATTGTTAGAGTGAT+AGG | + | chr7.2:3957158-3957177 | None:intergenic | 25.0% |
! | AGAAAGAATTAACAATTACC+AGG | + | chr7.2:3955446-3955465 | None:intergenic | 25.0% |
! | AGACAAATGAGAATTCTTAT+TGG | - | chr7.2:3955276-3955295 | MS.gene23109:intron | 25.0% |
! | AGGATGTTAAGAAAGATAAA+GGG | + | chr7.2:3957256-3957275 | None:intergenic | 25.0% |
! | ATATCAATAACCAATTGTTC+TGG | + | chr7.2:3957410-3957429 | None:intergenic | 25.0% |
! | ATTACAAATCAAAGAGAAGA+TGG | - | chr7.2:3959216-3959235 | MS.gene23109:intron | 25.0% |
! | CATAATGAAGAATAATCTCA+CGG | + | chr7.2:3959948-3959967 | None:intergenic | 25.0% |
! | CATCTAAAGATCGATTAATT+GGG | + | chr7.2:3958794-3958813 | None:intergenic | 25.0% |
! | CCAAACTTATACTAATCTTT+AGG | - | chr7.2:3959823-3959842 | MS.gene23109:intron | 25.0% |
! | CCTAAAGATTAGTATAAGTT+TGG | + | chr7.2:3959826-3959845 | None:intergenic | 25.0% |
! | GAATTTCGCATTGAAATATA+CGG | + | chr7.2:3954652-3954671 | None:intergenic | 25.0% |
! | GACAAATGAGAATTCTTATT+GGG | - | chr7.2:3955277-3955296 | MS.gene23109:intron | 25.0% |
! | GTCAATCAAAATTGTTTATG+CGG | + | chr7.2:3958563-3958582 | None:intergenic | 25.0% |
! | TATTAAAAGTGAATGTGGAA+AGG | + | chr7.2:3957190-3957209 | None:intergenic | 25.0% |
! | TGGTATATACTAACTAGTTA+TGG | + | chr7.2:3957020-3957039 | None:intergenic | 25.0% |
! | TTCAGATTGTCACATATAAA+CGG | + | chr7.2:3958462-3958481 | None:intergenic | 25.0% |
! | TTTAGATCTAACTATTTCGT+TGG | - | chr7.2:3955036-3955055 | MS.gene23109:CDS | 25.0% |
! | TTTATTGAAGTGCATTTACA+TGG | - | chr7.2:3954979-3954998 | MS.gene23109:intron | 25.0% |
! | TTTGATCTATCAATAAGATG+AGG | + | chr7.2:3959122-3959141 | None:intergenic | 25.0% |
!! | ATACTTGTTACTATCATACT+TGG | - | chr7.2:3959039-3959058 | MS.gene23109:intron | 25.0% |
!! | CTTACAATTTTCACCTTTTA+TGG | - | chr7.2:3958525-3958544 | MS.gene23109:CDS | 25.0% |
!! | TTGAGTCTTAAATGATTTTC+AGG | + | chr7.2:3957530-3957549 | None:intergenic | 25.0% |
!! | TTGATTGACATACTTTTATG+TGG | - | chr7.2:3958574-3958593 | MS.gene23109:intron | 25.0% |
!!! | ATGTAGTGGTTTGTTAAATA+TGG | - | chr7.2:3955066-3955085 | MS.gene23109:CDS | 25.0% |
!!! | CCACATTCACTTTTAATAAT+GGG | - | chr7.2:3957192-3957211 | MS.gene23109:intron | 25.0% |
!!! | TCCACATTCACTTTTAATAA+TGG | - | chr7.2:3957191-3957210 | MS.gene23109:intron | 25.0% |
AACAACACAGGGTTAATATT+TGG | + | chr7.2:3954870-3954889 | None:intergenic | 30.0% | |
AACAGATTGTGCAATTAATG+TGG | - | chr7.2:3958098-3958117 | MS.gene23109:intron | 30.0% | |
AACCATGATATATCTTGCAA+TGG | + | chr7.2:3955928-3955947 | None:intergenic | 30.0% | |
AACGATTCATTCAGATGAAA+AGG | + | chr7.2:3956301-3956320 | None:intergenic | 30.0% | |
AAGTGAACACAAAAACAAAG+AGG | - | chr7.2:3959140-3959159 | MS.gene23109:CDS | 30.0% | |
AATATGGATGGAGAAATTGT+TGG | - | chr7.2:3958255-3958274 | MS.gene23109:CDS | 30.0% | |
AATATTGACGATGCATACAA+AGG | - | chr7.2:3955825-3955844 | MS.gene23109:intron | 30.0% | |
AATGTTGTCTAATCAGAAAG+AGG | + | chr7.2:3959364-3959383 | None:intergenic | 30.0% | |
ACTTGTAATGAGCTTATGTA+TGG | + | chr7.2:3957311-3957330 | None:intergenic | 30.0% | |
AGATATATCATGGTTGACAT+TGG | - | chr7.2:3955933-3955952 | MS.gene23109:CDS | 30.0% | |
AGATTTAGTTAATTGCTCAC+TGG | + | chr7.2:3955634-3955653 | None:intergenic | 30.0% | |
ATAAACTACCCAAGTAGATA+TGG | - | chr7.2:3958147-3958166 | MS.gene23109:intron | 30.0% | |
ATATAACTGTAGCTTGATAC+TGG | + | chr7.2:3956669-3956688 | None:intergenic | 30.0% | |
ATATTGAGAACCAATTGATC+CGG | + | chr7.2:3957468-3957487 | None:intergenic | 30.0% | |
ATCCATATTCCATATCTACT+TGG | + | chr7.2:3958159-3958178 | None:intergenic | 30.0% | |
ATCGAAATATTAACAACAGC+AGG | + | chr7.2:3956261-3956280 | None:intergenic | 30.0% | |
ATCTGTTTGTAAATACTCTC+TGG | + | chr7.2:3958085-3958104 | None:intergenic | 30.0% | |
ATGAAAATCAACGACAACAT+GGG | + | chr7.2:3956457-3956476 | None:intergenic | 30.0% | |
ATGATAGTTTATCATGCTGT+AGG | - | chr7.2:3957335-3957354 | MS.gene23109:intron | 30.0% | |
ATTAATTGGGAACATACCAT+TGG | + | chr7.2:3958781-3958800 | None:intergenic | 30.0% | |
CAAGATTAGAGAGAAAATTG+TGG | + | chr7.2:3957223-3957242 | None:intergenic | 30.0% | |
CATAGATGTAAAATTGTTGC+AGG | - | chr7.2:3959999-3960018 | MS.gene23109:intron | 30.0% | |
CCCATTATTAAAAGTGAATG+TGG | + | chr7.2:3957195-3957214 | None:intergenic | 30.0% | |
CGTAACTATCACAATTAGAA+TGG | + | chr7.2:3959294-3959313 | None:intergenic | 30.0% | |
CTACATGAGTTAGAATAAGA+CGG | - | chr7.2:3956992-3957011 | MS.gene23109:CDS | 30.0% | |
CTAGGATTCTCACTTTAATA+GGG | + | chr7.2:3959079-3959098 | None:intergenic | 30.0% | |
CTTGTAATGAGCTTATGTAT+GGG | + | chr7.2:3957310-3957329 | None:intergenic | 30.0% | |
GAAAGAAAGTTCAACTGTTA+GGG | + | chr7.2:3957117-3957136 | None:intergenic | 30.0% | |
GAAATAATGTGTTTGTCACA+AGG | - | chr7.2:3959549-3959568 | MS.gene23109:intron | 30.0% | |
GAATTAGGAAAATTGCTTCA+AGG | - | chr7.2:3954816-3954835 | MS.gene23109:intron | 30.0% | |
GAGGATGTTAAGAAAGATAA+AGG | + | chr7.2:3957257-3957276 | None:intergenic | 30.0% | |
GATGTATTTGTGCAAAACTA+AGG | + | chr7.2:3956925-3956944 | None:intergenic | 30.0% | |
GATGTTGTCATTGAATTTGA+TGG | - | chr7.2:3959639-3959658 | MS.gene23109:intron | 30.0% | |
GCATCTAAAGATCGATTAAT+TGG | + | chr7.2:3958795-3958814 | None:intergenic | 30.0% | |
GGAACAATCATTAACAAAGA+TGG | - | chr7.2:3956414-3956433 | MS.gene23109:CDS | 30.0% | |
GTAGATATGGAATATGGATT+TGG | - | chr7.2:3958160-3958179 | MS.gene23109:intron | 30.0% | |
GTTAATATTTCGATTCCACA+AGG | - | chr7.2:3956267-3956286 | MS.gene23109:intron | 30.0% | |
GTTACTATCATACTTGGATA+GGG | - | chr7.2:3959045-3959064 | MS.gene23109:intron | 30.0% | |
TAAAAAAGTTACCGCGTAAT+TGG | + | chr7.2:3955253-3955272 | None:intergenic | 30.0% | |
TAAAAGTTCAAACCAGAAAG+AGG | + | chr7.2:3956016-3956035 | None:intergenic | 30.0% | |
TATTTATCCAACCAATTACG+CGG | - | chr7.2:3955239-3955258 | MS.gene23109:intron | 30.0% | |
TCATTCCCTAATGTCAATAA+GGG | - | chr7.2:3958745-3958764 | MS.gene23109:CDS | 30.0% | |
TCCAAGCAGAAAGTTTAATT+AGG | - | chr7.2:3958496-3958515 | MS.gene23109:CDS | 30.0% | |
TCCATATTCCATATCTACTT+GGG | + | chr7.2:3958158-3958177 | None:intergenic | 30.0% | |
TCTAACATGGCTTCAAATTT+AGG | - | chr7.2:3955874-3955893 | MS.gene23109:intron | 30.0% | |
TCTGTTTGTAAATACTCTCT+GGG | + | chr7.2:3958084-3958103 | None:intergenic | 30.0% | |
TGAAAGAAAGTTCAACTGTT+AGG | + | chr7.2:3957118-3957137 | None:intergenic | 30.0% | |
TGGTTAATACTTGAGTAGTT+AGG | - | chr7.2:3958594-3958613 | MS.gene23109:intron | 30.0% | |
TGTAATGTAGGTTCTTGAAT+TGG | - | chr7.2:3954716-3954735 | MS.gene23109:intron | 30.0% | |
TGTTACTATCATACTTGGAT+AGG | - | chr7.2:3959044-3959063 | MS.gene23109:intron | 30.0% | |
TTCAAAGTTGTTTGCAAAGT+TGG | - | chr7.2:3958897-3958916 | MS.gene23109:intron | 30.0% | |
TTCAAGACAGTGTACATATT+TGG | + | chr7.2:3956535-3956554 | None:intergenic | 30.0% | |
TTCATTCCCTAATGTCAATA+AGG | - | chr7.2:3958744-3958763 | MS.gene23109:CDS | 30.0% | |
TTTGATAAATAACTGTGTCG+AGG | - | chr7.2:3955214-3955233 | MS.gene23109:intron | 30.0% | |
TTTGGTATGTGATGTAATGT+AGG | - | chr7.2:3954704-3954723 | MS.gene23109:intron | 30.0% | |
! | ATAGAGCATTTCAAGAAAAG+TGG | - | chr7.2:3958351-3958370 | MS.gene23109:intron | 30.0% |
! | ATCTATCATGAGTTATTTCC+TGG | - | chr7.2:3955425-3955444 | MS.gene23109:intron | 30.0% |
! | TAGAGCATTTCAAGAAAAGT+GGG | - | chr7.2:3958352-3958371 | MS.gene23109:intron | 30.0% |
! | TATTATGATAGTGAAGCCAT+GGG | - | chr7.2:3959000-3959019 | MS.gene23109:intron | 30.0% |
! | TCTAGGATTCTCACTTTAAT+AGG | + | chr7.2:3959080-3959099 | None:intergenic | 30.0% |
! | TGAAGAATCTCTCTGATTTT+GGG | - | chr7.2:3955493-3955512 | MS.gene23109:intron | 30.0% |
! | TTAATGGCATGCTTTTCAAT+TGG | - | chr7.2:3955685-3955704 | MS.gene23109:intron | 30.0% |
! | TTATTATGATAGTGAAGCCA+TGG | - | chr7.2:3958999-3959018 | MS.gene23109:intron | 30.0% |
! | TTGAAGAATCTCTCTGATTT+TGG | - | chr7.2:3955492-3955511 | MS.gene23109:intron | 30.0% |
! | TTTTCAGAATCTAGATTCAC+AGG | - | chr7.2:3958827-3958846 | MS.gene23109:intron | 30.0% |
!! | ATTGGCTTTGTAGATTTCTA+TGG | - | chr7.2:3956363-3956382 | MS.gene23109:CDS | 30.0% |
!! | ATTTCTATGGTTTTGCTACA+GGG | - | chr7.2:3956376-3956395 | MS.gene23109:CDS | 30.0% |
!! | CTTTTAACTACAACCTTCAT+GGG | + | chr7.2:3960057-3960076 | None:intergenic | 30.0% |
!! | TCTTTTAACTACAACCTTCA+TGG | + | chr7.2:3960058-3960077 | None:intergenic | 30.0% |
!!! | TCGATTTTTTTTACTGTCTG+TGG | + | chr7.2:3959925-3959944 | None:intergenic | 30.0% |
AAAAGTGAATGTGGAAAGGA+AGG | + | chr7.2:3957186-3957205 | None:intergenic | 35.0% | |
AAACCCCCAACAAAAAAGTA+CGG | + | chr7.2:3955333-3955352 | None:intergenic | 35.0% | |
AAGAAAAGTGGGTATGTTTC+TGG | - | chr7.2:3958363-3958382 | MS.gene23109:intron | 35.0% | |
AATAACTGCAAGTAAATCGC+TGG | + | chr7.2:3955145-3955164 | None:intergenic | 35.0% | |
AATTCAATGACAACATCACC+AGG | + | chr7.2:3959636-3959655 | None:intergenic | 35.0% | |
ACATGTCTAAGGAAACTTCT+GGG | - | chr7.2:3956157-3956176 | MS.gene23109:intron | 35.0% | |
ACCCAAGTAGATATGGAATA+TGG | - | chr7.2:3958154-3958173 | MS.gene23109:intron | 35.0% | |
ACTGGAATTAGTGTGGTTAT+CGG | + | chr7.2:3955616-3955635 | None:intergenic | 35.0% | |
ACTGTAACAACCAAACCTTT+AGG | - | chr7.2:3956960-3956979 | MS.gene23109:CDS | 35.0% | |
AGAATGCCCTTATTGACATT+AGG | + | chr7.2:3958754-3958773 | None:intergenic | 35.0% | |
AGTTCAACTGTTAGGGTAAA+AGG | + | chr7.2:3957110-3957129 | None:intergenic | 35.0% | |
AGTTCTCTGTGATGTAAATG+TGG | - | chr7.2:3956586-3956605 | MS.gene23109:CDS | 35.0% | |
ATAGTAGCTCATTTAGCTGT+AGG | - | chr7.2:3957364-3957383 | MS.gene23109:intron | 35.0% | |
ATCTACTTGGGTAGTTTATG+CGG | + | chr7.2:3958146-3958165 | None:intergenic | 35.0% | |
CACATACATCTAAACATGCA+TGG | + | chr7.2:3956063-3956082 | None:intergenic | 35.0% | |
CATGAAAATCAACGACAACA+TGG | + | chr7.2:3956458-3956477 | None:intergenic | 35.0% | |
CTAATCAGAAAGAGGAGTAA+GGG | + | chr7.2:3959356-3959375 | None:intergenic | 35.0% | |
CTTTGTATGACTCAAAGCTA+GGG | - | chr7.2:3956745-3956764 | MS.gene23109:intron | 35.0% | |
GAAAAGGTAGAAAAACCTTG+TGG | + | chr7.2:3956285-3956304 | None:intergenic | 35.0% | |
GAAGGTTTGTGTTCAAGAAA+GGG | - | chr7.2:3956500-3956519 | MS.gene23109:intron | 35.0% | |
GAATGCCCTTATTGACATTA+GGG | + | chr7.2:3958753-3958772 | None:intergenic | 35.0% | |
GAGCAACACAATGCATATTA+TGG | + | chr7.2:3959502-3959521 | None:intergenic | 35.0% | |
GATATATCTTGCAATGGCAA+AGG | + | chr7.2:3955922-3955941 | None:intergenic | 35.0% | |
GATCCATTCCCAACAAAATA+GGG | - | chr7.2:3956826-3956845 | MS.gene23109:CDS | 35.0% | |
GCCTAATTAAACTTTCTGCT+TGG | + | chr7.2:3958500-3958519 | None:intergenic | 35.0% | |
GCTAAATGAGCTACTATACA+AGG | + | chr7.2:3957361-3957380 | None:intergenic | 35.0% | |
GTACTTTCTGAGTCATGATT+TGG | - | chr7.2:3956794-3956813 | MS.gene23109:intron | 35.0% | |
GTTGCAGGTTATTGAAATGA+TGG | - | chr7.2:3960014-3960033 | MS.gene23109:intron | 35.0% | |
TAATCAGAAAGAGGAGTAAG+GGG | + | chr7.2:3959355-3959374 | None:intergenic | 35.0% | |
TACACAAAACATAAGCGGAA+TGG | + | chr7.2:3959403-3959422 | None:intergenic | 35.0% | |
TCGTTGGATGATAAATGTAG+TGG | - | chr7.2:3955052-3955071 | MS.gene23109:CDS | 35.0% | |
TCTAATCAGAAAGAGGAGTA+AGG | + | chr7.2:3959357-3959376 | None:intergenic | 35.0% | |
TGATCCATTCCCAACAAAAT+AGG | - | chr7.2:3956825-3956844 | MS.gene23109:CDS | 35.0% | |
TGATGAATCAAAGCCATCTA+AGG | - | chr7.2:3956188-3956207 | MS.gene23109:intron | 35.0% | |
TGCCATTGCAAGATATATCA+TGG | - | chr7.2:3955923-3955942 | MS.gene23109:CDS | 35.0% | |
TGTGGACGTAACAAATCAAA+CGG | + | chr7.2:3955964-3955983 | None:intergenic | 35.0% | |
TTGAGATTATGCTGATGGTT+TGG | - | chr7.2:3956337-3956356 | MS.gene23109:CDS | 35.0% | |
TTGCATGTTATCTGCTTGTA+TGG | - | chr7.2:3958203-3958222 | MS.gene23109:CDS | 35.0% | |
! | AAAAAGTACGGTCATCGAAA+TGG | + | chr7.2:3955321-3955340 | None:intergenic | 35.0% |
! | AAAAGTACGGTCATCGAAAT+GGG | + | chr7.2:3955320-3955339 | None:intergenic | 35.0% |
! | AAGAATCTCTCTGATTTTGG+GGG | - | chr7.2:3955495-3955514 | MS.gene23109:intron | 35.0% |
! | AAGCAATGCCCTATTTTGTT+GGG | + | chr7.2:3956837-3956856 | None:intergenic | 35.0% |
! | AAGCCATCTAAGGATACTTT+TGG | - | chr7.2:3956198-3956217 | MS.gene23109:intron | 35.0% |
! | AGTGAACATCATGAAAGTGT+TGG | - | chr7.2:3958278-3958297 | MS.gene23109:CDS | 35.0% |
! | ATGCAAACGAAACATGCTTT+TGG | + | chr7.2:3956636-3956655 | None:intergenic | 35.0% |
! | ATGTGGTAGAAGAGTACAAT+TGG | - | chr7.2:3956603-3956622 | MS.gene23109:CDS | 35.0% |
! | ATTGAAGTCACTTTGCAAGA+TGG | - | chr7.2:3957665-3957684 | MS.gene23109:intron | 35.0% |
! | ATTTTACACACAGAGTCGAT+TGG | + | chr7.2:3958330-3958349 | None:intergenic | 35.0% |
! | GAAGAATCTCTCTGATTTTG+GGG | - | chr7.2:3955494-3955513 | MS.gene23109:intron | 35.0% |
! | TAAGCAATGCCCTATTTTGT+TGG | + | chr7.2:3956838-3956857 | None:intergenic | 35.0% |
! | TCGTTTTCATTCAGTTCTGT+AGG | + | chr7.2:3956880-3956899 | None:intergenic | 35.0% |
! | TGCAAACGAAACATGCTTTT+GGG | + | chr7.2:3956635-3956654 | None:intergenic | 35.0% |
! | TTTTCTTTGGCAACAACACA+GGG | + | chr7.2:3954881-3954900 | None:intergenic | 35.0% |
!! | AAATGATGGTGGACAAAGTT+GGG | - | chr7.2:3960028-3960047 | MS.gene23109:intron | 35.0% |
!! | ATCCCAAATCACTGCTTTTA+CGG | + | chr7.2:3958050-3958069 | None:intergenic | 35.0% |
!! | CGTTGAAGAGTGTAGAATTT+TGG | - | chr7.2:3955395-3955414 | MS.gene23109:intron | 35.0% |
!! | CTACCAAAAGTATCCTTAGA+TGG | + | chr7.2:3956204-3956223 | None:intergenic | 35.0% |
!! | GATTTCTATGGTTTTGCTAC+AGG | - | chr7.2:3956375-3956394 | MS.gene23109:CDS | 35.0% |
!! | GTTGATTTTCATGGCACAAA+AGG | - | chr7.2:3956465-3956484 | MS.gene23109:intron | 35.0% |
!! | TGCTTTCTTTTGCTATGCTT+TGG | - | chr7.2:3958959-3958978 | MS.gene23109:intron | 35.0% |
!! | TTCTTTTCAGGAGAGTGATA+CGG | - | chr7.2:3958653-3958672 | MS.gene23109:intron | 35.0% |
!! | TTTTTGACTAGGTAACTCCT+GGG | - | chr7.2:3959583-3959602 | MS.gene23109:intron | 35.0% |
!!! | ATGACCGTACTTTTTTGTTG+GGG | - | chr7.2:3955326-3955345 | MS.gene23109:intron | 35.0% |
!!! | CATGTTGTCGTTGATTTTCA+TGG | - | chr7.2:3956456-3956475 | MS.gene23109:intron | 35.0% |
!!! | CTCTTTTGAGATTATGCTGA+TGG | - | chr7.2:3956332-3956351 | MS.gene23109:CDS | 35.0% |
!!! | GATGACCGTACTTTTTTGTT+GGG | - | chr7.2:3955325-3955344 | MS.gene23109:intron | 35.0% |
AAAAGGTTCATCCAAAGGGA+AGG | - | chr7.2:3956482-3956501 | MS.gene23109:intron | 40.0% | |
AAAGTTACCGCGTAATTGGT+TGG | + | chr7.2:3955249-3955268 | None:intergenic | 40.0% | |
AACAACCAAACCTTTAGGTG+AGG | - | chr7.2:3956965-3956984 | MS.gene23109:CDS | 40.0% | |
AACGACGATTCTGTGAATTC+TGG | - | chr7.2:3956895-3956914 | MS.gene23109:CDS | 40.0% | |
AAGATGGAAGGACATTTGAG+GGG | - | chr7.2:3957681-3957700 | MS.gene23109:intron | 40.0% | |
ACGAAACGCAGTTAACAATC+TGG | - | chr7.2:3955168-3955187 | MS.gene23109:intron | 40.0% | |
AGAAAGAGGACAAACCATGT+TGG | + | chr7.2:3956002-3956021 | None:intergenic | 40.0% | |
AGCAGTGACAGTATTCTGAA+GGG | + | chr7.2:3957846-3957865 | None:intergenic | 40.0% | |
ATCTAAATCCCTGCTAACGT+TGG | - | chr7.2:3957062-3957081 | MS.gene23109:intron | 40.0% | |
ATGTAGGTTCTTGAATTGGC+TGG | - | chr7.2:3954720-3954739 | MS.gene23109:intron | 40.0% | |
ATGTAGTTGACCTCACCTAA+AGG | + | chr7.2:3956978-3956997 | None:intergenic | 40.0% | |
ATGTCTAAGGAAACTTCTGG+GGG | - | chr7.2:3956159-3956178 | MS.gene23109:intron | 40.0% | |
ATTGCTCACTGGAATTAGTG+TGG | + | chr7.2:3955623-3955642 | None:intergenic | 40.0% | |
CAAGATGGAAGGACATTTGA+GGG | - | chr7.2:3957680-3957699 | MS.gene23109:intron | 40.0% | |
CACAATGCATATTATGGCAG+AGG | + | chr7.2:3959496-3959515 | None:intergenic | 40.0% | |
CATGTCTAAGGAAACTTCTG+GGG | - | chr7.2:3956158-3956177 | MS.gene23109:intron | 40.0% | |
CTGAAAACTCGACAGCAAAA+AGG | + | chr7.2:3957286-3957305 | None:intergenic | 40.0% | |
GACAGCAAAAAGGCAAAATG+AGG | + | chr7.2:3957276-3957295 | None:intergenic | 40.0% | |
GACATGTCTAAGGAAACTTC+TGG | - | chr7.2:3956156-3956175 | MS.gene23109:intron | 40.0% | |
GACCGTAAAAGCAGTGATTT+GGG | - | chr7.2:3958045-3958064 | MS.gene23109:intron | 40.0% | |
GAGAATTCTTATTGGGCTGT+GGG | - | chr7.2:3955284-3955303 | MS.gene23109:intron | 40.0% | |
GCACAAAAGGTTCATCCAAA+GGG | - | chr7.2:3956478-3956497 | MS.gene23109:intron | 40.0% | |
GCAGGTTATTGAAATGATGG+TGG | - | chr7.2:3960017-3960036 | MS.gene23109:intron | 40.0% | |
GCTTTGTATGACTCAAAGCT+AGG | - | chr7.2:3956744-3956763 | MS.gene23109:intron | 40.0% | |
GGAAGGTTTGTGTTCAAGAA+AGG | - | chr7.2:3956499-3956518 | MS.gene23109:intron | 40.0% | |
GGTGCGAAGATAAAACTTTC+TGG | - | chr7.2:3957876-3957895 | MS.gene23109:intron | 40.0% | |
GTGAGGAACGATGATGAATT+AGG | - | chr7.2:3954801-3954820 | MS.gene23109:intron | 40.0% | |
GTGGACGTAACAAATCAAAC+GGG | + | chr7.2:3955963-3955982 | None:intergenic | 40.0% | |
TCTACTTGGGTAGTTTATGC+GGG | + | chr7.2:3958145-3958164 | None:intergenic | 40.0% | |
TCTCCATCCATATTGACAAG+TGG | + | chr7.2:3958249-3958268 | None:intergenic | 40.0% | |
TCTGATGTCTTCATTTCACG+AGG | + | chr7.2:3957615-3957634 | None:intergenic | 40.0% | |
TGACCGTAAAAGCAGTGATT+TGG | - | chr7.2:3958044-3958063 | MS.gene23109:intron | 40.0% | |
TGAGAATTCTTATTGGGCTG+TGG | - | chr7.2:3955283-3955302 | MS.gene23109:intron | 40.0% | |
TGCGACTTTAACTGTGATTC+CGG | - | chr7.2:3960092-3960111 | MS.gene23109:CDS | 40.0% | |
TGGACGTAACAAATCAAACG+GGG | + | chr7.2:3955962-3955981 | None:intergenic | 40.0% | |
TGTAGGTTCTTGAATTGGCT+GGG | - | chr7.2:3954721-3954740 | MS.gene23109:intron | 40.0% | |
TTATCTGCTTGTATGGCACA+GGG | - | chr7.2:3958210-3958229 | MS.gene23109:CDS | 40.0% | |
TTGAACACAAACCTTCCCTT+TGG | + | chr7.2:3956496-3956515 | None:intergenic | 40.0% | |
TTGTGATAGTTACGTGTAGC+AGG | - | chr7.2:3959300-3959319 | MS.gene23109:intron | 40.0% | |
! | AACATGGTTTGTCCTCTTTC+TGG | - | chr7.2:3956001-3956020 | MS.gene23109:CDS | 40.0% |
! | AACCACTGTCACAACCTTTT+CGG | + | chr7.2:3955362-3955381 | None:intergenic | 40.0% |
! | AAGTCACTTTGCAAGATGGA+AGG | - | chr7.2:3957669-3957688 | MS.gene23109:intron | 40.0% |
! | ACAGTATTCTGAAGGGAATG+CGG | + | chr7.2:3957839-3957858 | None:intergenic | 40.0% |
! | AGCAGTGATTTGGGATTTAG+TGG | - | chr7.2:3958054-3958073 | MS.gene23109:intron | 40.0% |
! | ATGCCCTATTTTGTTGGGAA+TGG | + | chr7.2:3956832-3956851 | None:intergenic | 40.0% |
! | ATGCTGATGGTTTGGAGTAT+TGG | - | chr7.2:3956345-3956364 | MS.gene23109:CDS | 40.0% |
! | CAAAGCTTGGTTCTTCAACT+AGG | - | chr7.2:3957777-3957796 | MS.gene23109:intron | 40.0% |
! | GTTTTCTTTGGCAACAACAC+AGG | + | chr7.2:3954882-3954901 | None:intergenic | 40.0% |
! | TTTGCTACAGGGAAGAGTAT+TGG | - | chr7.2:3956387-3956406 | MS.gene23109:CDS | 40.0% |
!! | AAATTCTGAAACCCCACTTC+CGG | - | chr7.2:3957751-3957770 | MS.gene23109:intron | 40.0% |
!! | AATGATGGTGGACAAAGTTG+GGG | - | chr7.2:3960029-3960048 | MS.gene23109:intron | 40.0% |
!! | GAAATGATGGTGGACAAAGT+TGG | - | chr7.2:3960027-3960046 | MS.gene23109:intron | 40.0% |
!! | GTTTTTGACTAGGTAACTCC+TGG | - | chr7.2:3959582-3959601 | MS.gene23109:intron | 40.0% |
!! | TAAGGGCATTCTTGTACCAA+TGG | - | chr7.2:3958762-3958781 | MS.gene23109:CDS | 40.0% |
!! | TTGTATAGTAGCTTGCTTGC+CGG | - | chr7.2:3957446-3957465 | MS.gene23109:intron | 40.0% |
!!! | CGATGACCGTACTTTTTTGT+TGG | - | chr7.2:3955324-3955343 | MS.gene23109:intron | 40.0% |
!!! | TGACCGTACTTTTTTGTTGG+GGG | - | chr7.2:3955327-3955346 | MS.gene23109:intron | 40.0% |
AAGCTGAGATTGGATTCCTC+CGG | + | chr7.2:3960114-3960133 | None:intergenic | 45.0% | |
AAGGACATTTGAGGGGAAAG+TGG | - | chr7.2:3957688-3957707 | MS.gene23109:intron | 45.0% | |
ACACACAGAGTCGATTGGTA+CGG | + | chr7.2:3958325-3958344 | None:intergenic | 45.0% | |
ACATGTCCGAAGAAGGAACA+GGG | + | chr7.2:3956143-3956162 | None:intergenic | 45.0% | |
ACTCAAAGTCCAACGTTAGC+AGG | + | chr7.2:3957074-3957093 | None:intergenic | 45.0% | |
AGCAGCGAGATATTCGAGAA+CGG | + | chr7.2:3954619-3954638 | None:intergenic | 45.0% | |
AGCATTCTTAGTCCAAGCCA+TGG | + | chr7.2:3958679-3958698 | None:intergenic | 45.0% | |
AGGGTGGCTTAAGATCTGAT+GGG | - | chr7.2:3956764-3956783 | MS.gene23109:intron | 45.0% | |
AGTGAATGTGGAAAGGAAGG+AGG | + | chr7.2:3957183-3957202 | None:intergenic | 45.0% | |
AGTTAGCCCTGTTCCTTCTT+CGG | - | chr7.2:3956134-3956153 | MS.gene23109:intron | 45.0% | |
CAAGGTGTGACAATTGCTAG+TGG | - | chr7.2:3954834-3954853 | MS.gene23109:intron | 45.0% | |
CAATGACAACATCACCAGGA+CGG | + | chr7.2:3959632-3959651 | None:intergenic | 45.0% | |
CAGCAGTGACAGTATTCTGA+AGG | + | chr7.2:3957847-3957866 | None:intergenic | 45.0% | |
CTCAAAGTCCAACGTTAGCA+GGG | + | chr7.2:3957073-3957092 | None:intergenic | 45.0% | |
CTGTCACTGCTGGTATTGTA+AGG | - | chr7.2:3957855-3957874 | MS.gene23109:intron | 45.0% | |
CTTCAGAATACTGTCACTGC+TGG | - | chr7.2:3957845-3957864 | MS.gene23109:intron | 45.0% | |
GAAGAACCAAGCTTTGCTTC+CGG | + | chr7.2:3957773-3957792 | None:intergenic | 45.0% | |
GACTTTAACTGTGATTCCGG+AGG | - | chr7.2:3960095-3960114 | MS.gene23109:CDS | 45.0% | |
GATCTGGGGAGCAAAACAAT+TGG | - | chr7.2:3959770-3959789 | MS.gene23109:intron | 45.0% | |
GCAAATGCTGCTGCTAAAGT+TGG | - | chr7.2:3956234-3956253 | MS.gene23109:intron | 45.0% | |
GCAAGATGGAAGGACATTTG+AGG | - | chr7.2:3957679-3957698 | MS.gene23109:intron | 45.0% | |
GGCAAGCAAGCTACTATACA+AGG | + | chr7.2:3957447-3957466 | None:intergenic | 45.0% | |
GGCACAAAAGGTTCATCCAA+AGG | - | chr7.2:3956477-3956496 | MS.gene23109:intron | 45.0% | |
GTTATCTGCTTGTATGGCAC+AGG | - | chr7.2:3958209-3958228 | MS.gene23109:CDS | 45.0% | |
GTTGACCTCACCTAAAGGTT+TGG | + | chr7.2:3956973-3956992 | None:intergenic | 45.0% | |
TACCTCCTTCATGCTTTCCA+CGG | + | chr7.2:3959670-3959689 | None:intergenic | 45.0% | |
TACTGTTCTTGCTTGGTCTG+TGG | - | chr7.2:3956722-3956741 | MS.gene23109:intron | 45.0% | |
TAGGGTGGCTTAAGATCTGA+TGG | - | chr7.2:3956763-3956782 | MS.gene23109:intron | 45.0% | |
TCCTTAGACATGTCCGAAGA+AGG | + | chr7.2:3956150-3956169 | None:intergenic | 45.0% | |
TCCTTCTTCGGACATGTCTA+AGG | - | chr7.2:3956146-3956165 | MS.gene23109:intron | 45.0% | |
TGAATTTGATGGAAAGCCCG+TGG | - | chr7.2:3959650-3959669 | MS.gene23109:intron | 45.0% | |
TGGCTGTAAAAGATGTCTCC+TGG | - | chr7.2:3957896-3957915 | MS.gene23109:intron | 45.0% | |
TGGGTAGTTTATGCGGGAAA+AGG | + | chr7.2:3958139-3958158 | None:intergenic | 45.0% | |
TGGTCGAAAGACGACAAATG+TGG | + | chr7.2:3955982-3956001 | None:intergenic | 45.0% | |
TGTATGACTCAAAGCTAGGG+TGG | - | chr7.2:3956748-3956767 | MS.gene23109:intron | 45.0% | |
TGTATGGCACAGGGAAATTC+TGG | - | chr7.2:3958219-3958238 | MS.gene23109:CDS | 45.0% | |
TTGTCGTCTTTCGACCAACA+TGG | - | chr7.2:3955985-3956004 | MS.gene23109:CDS | 45.0% | |
! | AGCTTGCTTGCCAGAACAAT+TGG | - | chr7.2:3957397-3957416 | MS.gene23109:intron | 45.0% |
! | AGTAGTTTTCTCCGCAGCAA+CGG | + | chr7.2:3954904-3954923 | None:intergenic | 45.0% |
! | CATTGTGTTGCTCAAATGCG+AGG | - | chr7.2:3959509-3959528 | MS.gene23109:intron | 45.0% |
! | GAAGTGCTACTGTTCTTGCT+TGG | - | chr7.2:3956715-3956734 | MS.gene23109:intron | 45.0% |
! | TATGATAGTGAAGCCATGGG+CGG | - | chr7.2:3959003-3959022 | MS.gene23109:intron | 45.0% |
!! | ATGAAAGTGTTGGCTGCTGA+TGG | - | chr7.2:3958288-3958307 | MS.gene23109:CDS | 45.0% |
!! | TGAAAGTGTTGGCTGCTGAT+GGG | - | chr7.2:3958289-3958308 | MS.gene23109:CDS | 45.0% |
AACGATACCCACAGCTCCAA+CGG | + | chr7.2:3955568-3955587 | None:intergenic | 50.0% | |
AAGCTTTGCTTCCGGAAGTG+GGG | + | chr7.2:3957765-3957784 | None:intergenic | 50.0% | |
ACAGCAAGGCACACATGTCT+AGG | + | chr7.2:3954783-3954802 | None:intergenic | 50.0% | |
ACCTCCTTCATGCTTTCCAC+GGG | + | chr7.2:3959669-3959688 | None:intergenic | 50.0% | |
AGCGAGATATTCGAGAACGG+CGG | + | chr7.2:3954616-3954635 | None:intergenic | 50.0% | |
ATGGCACAGGGAAATTCTGG+AGG | - | chr7.2:3958222-3958241 | MS.gene23109:CDS | 50.0% | |
ATGGCTATTACCCAATCCCC+GGG | + | chr7.2:3957809-3957828 | None:intergenic | 50.0% | |
CAAGCTTTGCTTCCGGAAGT+GGG | + | chr7.2:3957766-3957785 | None:intergenic | 50.0% | |
CACCGAAAAGGTTGTGACAG+TGG | - | chr7.2:3955357-3955376 | MS.gene23109:intron | 50.0% | |
CAGCAAGGCACACATGTCTA+GGG | + | chr7.2:3954782-3954801 | None:intergenic | 50.0% | |
CATCATCGTTCCTCACAGCA+AGG | + | chr7.2:3954797-3954816 | None:intergenic | 50.0% | |
CATGGCTATTACCCAATCCC+CGG | + | chr7.2:3957810-3957829 | None:intergenic | 50.0% | |
GACATGTCCGAAGAAGGAAC+AGG | + | chr7.2:3956144-3956163 | None:intergenic | 50.0% | |
GCCAAAGAAAACCGTTGCTG+CGG | - | chr7.2:3954890-3954909 | MS.gene23109:intron | 50.0% | |
GGGCCACTTGTCAATATGGA+TGG | - | chr7.2:3958243-3958262 | MS.gene23109:CDS | 50.0% | |
GGGGATTGGGTAATAGCCAT+GGG | - | chr7.2:3957809-3957828 | MS.gene23109:intron | 50.0% | |
GGTGTGACAATTGCTAGTGG+TGG | - | chr7.2:3954837-3954856 | MS.gene23109:intron | 50.0% | |
GTAGAAGTTTGAACCGCCCA+TGG | + | chr7.2:3959019-3959038 | None:intergenic | 50.0% | |
TAGGAACGTTCGTACGTGTG+CGG | - | chr7.2:3955893-3955912 | MS.gene23109:intron | 50.0% | |
TCTCGAATATCTCGCTGCTG+AGG | - | chr7.2:3954620-3954639 | MS.gene23109:CDS | 50.0% | |
TCTTCAACTAGGCTTCGTCC+CGG | - | chr7.2:3957788-3957807 | MS.gene23109:intron | 50.0% | |
TGGAGGGCCACTTGTCAATA+TGG | - | chr7.2:3958239-3958258 | MS.gene23109:CDS | 50.0% | |
TGGCACAGGGAAATTCTGGA+GGG | - | chr7.2:3958223-3958242 | MS.gene23109:CDS | 50.0% | |
TTGAACAGAAGCTCTGCCGT+TGG | - | chr7.2:3955549-3955568 | MS.gene23109:intron | 50.0% | |
! | AAAGCCCGTGGAAAGCATGA+AGG | - | chr7.2:3959662-3959681 | MS.gene23109:intron | 50.0% |
! | AGCTTGCTTGCCGGATCAAT+TGG | - | chr7.2:3957455-3957474 | MS.gene23109:intron | 50.0% |
! | TATTCTCAGCGTGTTGGCAC+TGG | - | chr7.2:3954573-3954592 | MS.gene23109:CDS | 50.0% |
! | TCCGCAGCAACGGTTTTCTT+TGG | + | chr7.2:3954894-3954913 | None:intergenic | 50.0% |
!! | ACAGGGAAGAGTATTGGCTC+TGG | - | chr7.2:3956393-3956412 | MS.gene23109:CDS | 50.0% |
!!! | GGGGGTTTTGAACACCGAAA+AGG | - | chr7.2:3955345-3955364 | MS.gene23109:intron | 50.0% |
AAGGGAATGCGGACAACCCA+TGG | + | chr7.2:3957828-3957847 | None:intergenic | 55.0% | |
AGAGTGATACGGCCATGGCT+TGG | - | chr7.2:3958664-3958683 | MS.gene23109:intron | 55.0% | |
CCAAGCTTTGCTTCCGGAAG+TGG | + | chr7.2:3957767-3957786 | None:intergenic | 55.0% | |
CCACTTCCGGAAGCAAAGCT+TGG | - | chr7.2:3957764-3957783 | MS.gene23109:intron | 55.0% | |
CGGGGATTGGGTAATAGCCA+TGG | - | chr7.2:3957808-3957827 | MS.gene23109:intron | 55.0% | |
CTTCAACTAGGCTTCGTCCC+GGG | - | chr7.2:3957789-3957808 | MS.gene23109:intron | 55.0% | |
GGTCGCTATTCTCAGCGTGT+TGG | - | chr7.2:3954567-3954586 | MS.gene23109:CDS | 55.0% | |
TCAGGAGAGTGATACGGCCA+TGG | - | chr7.2:3958659-3958678 | MS.gene23109:intron | 55.0% | |
TTCAACTAGGCTTCGTCCCG+GGG | - | chr7.2:3957790-3957809 | MS.gene23109:intron | 55.0% | |
! | CAAAGTTGGGGTGCCCATGA+AGG | - | chr7.2:3960041-3960060 | MS.gene23109:intron | 55.0% |
! | GACATGTGTGCCTTGCTGTG+AGG | - | chr7.2:3954784-3954803 | MS.gene23109:intron | 55.0% |
! | GCTGTGGGTATCGTTGCTGT+TGG | - | chr7.2:3955573-3955592 | MS.gene23109:intron | 55.0% |
!! | AGTGTTGGCTGCTGATGGGT+TGG | - | chr7.2:3958293-3958312 | MS.gene23109:CDS | 55.0% |
!! | GTGTTGGCTGCTGATGGGTT+GGG | - | chr7.2:3958294-3958313 | MS.gene23109:CDS | 55.0% |
AAGCTCTGCCGTTGGAGCTG+TGG | - | chr7.2:3955557-3955576 | MS.gene23109:intron | 60.0% | |
AGAACGGCGGCGAGGTAGAT+CGG | + | chr7.2:3954603-3954622 | None:intergenic | 60.0% | |
AGCTCTGCCGTTGGAGCTGT+GGG | - | chr7.2:3955558-3955577 | MS.gene23109:intron | 60.0% | |
GAACCCAGCACGATCACCAG+GGG | + | chr7.2:3959610-3959629 | None:intergenic | 60.0% | |
GATATTCGAGAACGGCGGCG+AGG | + | chr7.2:3954611-3954630 | None:intergenic | 60.0% | |
GGAACCCAGCACGATCACCA+GGG | + | chr7.2:3959611-3959630 | None:intergenic | 60.0% | |
TAGGCTTCGTCCCGGGGATT+GGG | - | chr7.2:3957796-3957815 | MS.gene23109:intron | 60.0% | |
TAGGTAACTCCTGGGTCCCC+TGG | - | chr7.2:3959591-3959610 | MS.gene23109:intron | 60.0% | |
! | GCCCGTGGAAAGCATGAAGG+AGG | - | chr7.2:3959665-3959684 | MS.gene23109:intron | 60.0% |
CGGAACCCAGCACGATCACC+AGG | + | chr7.2:3959612-3959631 | None:intergenic | 65.0% | |
CTAGGCTTCGTCCCGGGGAT+TGG | - | chr7.2:3957795-3957814 | MS.gene23109:intron | 65.0% | |
GATCGTGCTGGGTTCCGTCC+TGG | - | chr7.2:3959615-3959634 | MS.gene23109:intron | 65.0% | |
GGTCCCCTGGTGATCGTGCT+GGG | - | chr7.2:3959604-3959623 | MS.gene23109:intron | 65.0% | |
GCACGATCACCAGGGGACCC+AGG | + | chr7.2:3959603-3959622 | None:intergenic | 70.0% | |
GGGTCCCCTGGTGATCGTGC+TGG | - | chr7.2:3959603-3959622 | MS.gene23109:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.2 | gene | 3954558 | 3960137 | 3954558 | ID=MS.gene23109 |
chr7.2 | mRNA | 3954558 | 3960137 | 3954558 | ID=MS.gene23109.t1;Parent=MS.gene23109 |
chr7.2 | exon | 3960054 | 3960137 | 3960054 | ID=MS.gene23109.t1.exon1;Parent=MS.gene23109.t1 |
chr7.2 | CDS | 3960054 | 3960137 | 3960054 | ID=cds.MS.gene23109.t1;Parent=MS.gene23109.t1 |
chr7.2 | exon | 3959062 | 3959161 | 3959062 | ID=MS.gene23109.t1.exon2;Parent=MS.gene23109.t1 |
chr7.2 | CDS | 3959062 | 3959161 | 3959062 | ID=cds.MS.gene23109.t1;Parent=MS.gene23109.t1 |
chr7.2 | exon | 3958689 | 3958799 | 3958689 | ID=MS.gene23109.t1.exon3;Parent=MS.gene23109.t1 |
chr7.2 | CDS | 3958689 | 3958799 | 3958689 | ID=cds.MS.gene23109.t1;Parent=MS.gene23109.t1 |
chr7.2 | exon | 3958407 | 3958586 | 3958407 | ID=MS.gene23109.t1.exon4;Parent=MS.gene23109.t1 |
chr7.2 | CDS | 3958407 | 3958586 | 3958407 | ID=cds.MS.gene23109.t1;Parent=MS.gene23109.t1 |
chr7.2 | exon | 3958192 | 3958319 | 3958192 | ID=MS.gene23109.t1.exon5;Parent=MS.gene23109.t1 |
chr7.2 | CDS | 3958192 | 3958319 | 3958192 | ID=cds.MS.gene23109.t1;Parent=MS.gene23109.t1 |
chr7.2 | exon | 3956819 | 3957030 | 3956819 | ID=MS.gene23109.t1.exon6;Parent=MS.gene23109.t1 |
chr7.2 | CDS | 3956819 | 3957030 | 3956819 | ID=cds.MS.gene23109.t1;Parent=MS.gene23109.t1 |
chr7.2 | exon | 3956576 | 3956657 | 3956576 | ID=MS.gene23109.t1.exon7;Parent=MS.gene23109.t1 |
chr7.2 | CDS | 3956576 | 3956657 | 3956576 | ID=cds.MS.gene23109.t1;Parent=MS.gene23109.t1 |
chr7.2 | exon | 3956322 | 3956464 | 3956322 | ID=MS.gene23109.t1.exon8;Parent=MS.gene23109.t1 |
chr7.2 | CDS | 3956322 | 3956464 | 3956322 | ID=cds.MS.gene23109.t1;Parent=MS.gene23109.t1 |
chr7.2 | exon | 3955912 | 3956032 | 3955912 | ID=MS.gene23109.t1.exon9;Parent=MS.gene23109.t1 |
chr7.2 | CDS | 3955912 | 3956032 | 3955912 | ID=cds.MS.gene23109.t1;Parent=MS.gene23109.t1 |
chr7.2 | exon | 3955009 | 3955101 | 3955009 | ID=MS.gene23109.t1.exon10;Parent=MS.gene23109.t1 |
chr7.2 | CDS | 3955009 | 3955101 | 3955009 | ID=cds.MS.gene23109.t1;Parent=MS.gene23109.t1 |
chr7.2 | exon | 3954558 | 3954674 | 3954558 | ID=MS.gene23109.t1.exon11;Parent=MS.gene23109.t1 |
chr7.2 | CDS | 3954558 | 3954674 | 3954558 | ID=cds.MS.gene23109.t1;Parent=MS.gene23109.t1 |
Gene Sequence |
Protein sequence |