Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene050979.t1 | XP_013444515.1 | 80.7 | 420 | 42 | 4 | 1 | 382 | 1 | 419 | 1.60E-172 | 615.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene050979.t1 | Q9M126 | 41.4 | 174 | 66 | 4 | 14 | 154 | 6 | 176 | 2.3e-26 | 121.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene050979.t1 | G7ZZ26 | 80.7 | 420 | 42 | 4 | 1 | 382 | 1 | 419 | 1.2e-172 | 615.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene050979.t1 | TF | NAC |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene050979 | MS.gene066276 | 0.978783 | 1.49E-146 | -1.69E-46 |
MS.gene050979 | MS.gene25002 | 0.89377 | 4.61E-75 | -1.69E-46 |
MS.gene050979 | MS.gene25004 | 0.883541 | 4.11E-71 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene050979.t1 | MTR_8g023860 | 80.714 | 420 | 42 | 4 | 1 | 382 | 1 | 419 | 0.0 | 635 |
MS.gene050979.t1 | MTR_8g023840 | 58.333 | 432 | 96 | 7 | 1 | 382 | 1 | 398 | 1.42e-151 | 434 |
MS.gene050979.t1 | MTR_8g023900 | 56.786 | 280 | 79 | 4 | 1 | 240 | 184 | 461 | 2.66e-101 | 308 |
MS.gene050979.t1 | MTR_8g023900 | 52.973 | 185 | 54 | 3 | 1 | 152 | 1 | 185 | 5.02e-55 | 188 |
MS.gene050979.t1 | MTR_8g023930 | 59.108 | 269 | 69 | 4 | 10 | 238 | 22 | 289 | 4.56e-100 | 305 |
MS.gene050979.t1 | MTR_8g023880 | 37.681 | 276 | 102 | 10 | 12 | 238 | 7 | 261 | 1.42e-39 | 142 |
MS.gene050979.t1 | MTR_5g069030 | 34.672 | 274 | 119 | 11 | 8 | 237 | 21 | 278 | 9.49e-29 | 118 |
MS.gene050979.t1 | MTR_3g093050 | 41.104 | 163 | 58 | 5 | 8 | 134 | 18 | 178 | 6.47e-28 | 115 |
MS.gene050979.t1 | MTR_3g093050 | 41.104 | 163 | 58 | 5 | 8 | 134 | 18 | 178 | 6.89e-28 | 115 |
MS.gene050979.t1 | MTR_3g093040 | 39.891 | 183 | 63 | 7 | 1 | 146 | 100 | 272 | 8.86e-28 | 111 |
MS.gene050979.t1 | MTR_6g477900 | 38.095 | 168 | 64 | 6 | 12 | 142 | 6 | 170 | 1.25e-25 | 103 |
MS.gene050979.t1 | MTR_3g064580 | 36.813 | 182 | 74 | 5 | 12 | 155 | 6 | 184 | 6.86e-25 | 107 |
MS.gene050979.t1 | MTR_3g109340 | 39.073 | 151 | 58 | 4 | 12 | 129 | 22 | 171 | 1.99e-24 | 103 |
MS.gene050979.t1 | MTR_3g109340 | 38.816 | 152 | 58 | 5 | 12 | 129 | 22 | 172 | 2.74e-23 | 100 |
MS.gene050979.t1 | MTR_4g036030 | 38.854 | 157 | 57 | 5 | 8 | 128 | 3 | 156 | 3.47e-23 | 99.8 |
MS.gene050979.t1 | MTR_7g005280 | 35.119 | 168 | 77 | 5 | 11 | 148 | 14 | 179 | 4.95e-23 | 97.4 |
MS.gene050979.t1 | MTR_5g014300 | 35.542 | 166 | 67 | 5 | 12 | 138 | 6 | 170 | 8.79e-23 | 98.2 |
MS.gene050979.t1 | MTR_5g012080 | 38.994 | 159 | 54 | 6 | 9 | 128 | 4 | 158 | 1.19e-22 | 98.2 |
MS.gene050979.t1 | MTR_8g099750 | 36.774 | 155 | 59 | 5 | 9 | 125 | 11 | 164 | 1.68e-22 | 95.1 |
MS.gene050979.t1 | MTR_4g098630 | 36.898 | 187 | 77 | 7 | 12 | 160 | 6 | 189 | 1.73e-22 | 97.1 |
MS.gene050979.t1 | MTR_4g101680 | 36.095 | 169 | 69 | 5 | 8 | 140 | 3 | 168 | 1.83e-22 | 97.8 |
MS.gene050979.t1 | MTR_3g070030 | 40.994 | 161 | 51 | 8 | 13 | 132 | 20 | 177 | 3.42e-22 | 97.1 |
MS.gene050979.t1 | MTR_6g084430 | 37.888 | 161 | 62 | 7 | 10 | 135 | 3 | 160 | 5.38e-22 | 95.9 |
MS.gene050979.t1 | MTR_2g064090 | 35.897 | 156 | 59 | 5 | 12 | 129 | 6 | 158 | 8.73e-22 | 95.5 |
MS.gene050979.t1 | MTR_1g069805 | 34.899 | 149 | 67 | 4 | 12 | 130 | 10 | 158 | 9.65e-22 | 94.4 |
MS.gene050979.t1 | MTR_3g435150 | 40.000 | 155 | 53 | 7 | 12 | 129 | 16 | 167 | 1.38e-21 | 94.4 |
MS.gene050979.t1 | MTR_2g078700 | 40.310 | 129 | 46 | 3 | 11 | 109 | 22 | 149 | 1.89e-21 | 95.1 |
MS.gene050979.t1 | MTR_1g096430 | 34.884 | 172 | 73 | 5 | 12 | 147 | 7 | 175 | 2.03e-21 | 94.4 |
MS.gene050979.t1 | MTR_2g062730 | 28.926 | 242 | 118 | 7 | 12 | 208 | 10 | 242 | 2.32e-21 | 94.4 |
MS.gene050979.t1 | MTR_2g064470 | 35.976 | 164 | 70 | 6 | 12 | 142 | 11 | 172 | 3.17e-21 | 93.2 |
MS.gene050979.t1 | MTR_4g035590 | 39.610 | 154 | 51 | 7 | 12 | 128 | 8 | 156 | 6.49e-21 | 93.2 |
MS.gene050979.t1 | MTR_1g008740 | 34.868 | 152 | 65 | 4 | 12 | 129 | 13 | 164 | 9.53e-21 | 92.8 |
MS.gene050979.t1 | MTR_5g076850 | 36.129 | 155 | 59 | 5 | 12 | 129 | 6 | 157 | 1.10e-20 | 94.4 |
MS.gene050979.t1 | MTR_1g008740 | 34.868 | 152 | 65 | 4 | 12 | 129 | 27 | 178 | 1.11e-20 | 92.8 |
MS.gene050979.t1 | MTR_7g097090 | 34.247 | 146 | 64 | 4 | 12 | 126 | 10 | 154 | 1.56e-20 | 91.3 |
MS.gene050979.t1 | MTR_3g116070 | 38.583 | 127 | 48 | 2 | 12 | 108 | 23 | 149 | 2.06e-20 | 91.7 |
MS.gene050979.t1 | MTR_5g021710 | 37.255 | 153 | 57 | 5 | 12 | 128 | 8 | 157 | 4.11e-20 | 90.9 |
MS.gene050979.t1 | MTR_2g080010 | 32.727 | 165 | 64 | 4 | 11 | 129 | 14 | 177 | 4.20e-20 | 90.9 |
MS.gene050979.t1 | MTR_4g081870 | 37.975 | 158 | 52 | 7 | 12 | 128 | 9 | 161 | 4.66e-20 | 89.4 |
MS.gene050979.t1 | MTR_8g076110 | 35.948 | 153 | 59 | 5 | 12 | 128 | 6 | 155 | 6.95e-20 | 89.7 |
MS.gene050979.t1 | MTR_3g070040 | 28.247 | 308 | 161 | 13 | 14 | 271 | 10 | 307 | 7.40e-20 | 90.1 |
MS.gene050979.t1 | MTR_1g090723 | 36.047 | 172 | 68 | 6 | 15 | 146 | 11 | 180 | 7.73e-20 | 91.7 |
MS.gene050979.t1 | MTR_6g012670 | 39.073 | 151 | 53 | 6 | 12 | 132 | 20 | 161 | 1.07e-19 | 89.4 |
MS.gene050979.t1 | MTR_4g089135 | 38.281 | 128 | 48 | 3 | 11 | 108 | 14 | 140 | 1.61e-19 | 89.0 |
MS.gene050979.t1 | MTR_1g090723 | 35.673 | 171 | 69 | 6 | 15 | 146 | 11 | 179 | 1.91e-19 | 90.5 |
MS.gene050979.t1 | MTR_1g090723 | 35.673 | 171 | 69 | 6 | 15 | 146 | 11 | 179 | 2.06e-19 | 90.5 |
MS.gene050979.t1 | MTR_2g086880 | 35.625 | 160 | 59 | 7 | 2 | 130 | 16 | 162 | 4.13e-19 | 89.4 |
MS.gene050979.t1 | MTR_2g093810 | 35.897 | 156 | 60 | 5 | 13 | 129 | 15 | 169 | 5.66e-19 | 87.0 |
MS.gene050979.t1 | MTR_7g011130 | 42.857 | 126 | 39 | 5 | 14 | 109 | 21 | 143 | 5.84e-19 | 87.4 |
MS.gene050979.t1 | MTR_2g086880 | 37.415 | 147 | 56 | 6 | 15 | 130 | 21 | 162 | 6.32e-19 | 88.6 |
MS.gene050979.t1 | MTR_7g100990 | 33.121 | 157 | 65 | 5 | 11 | 128 | 10 | 165 | 1.22e-18 | 86.3 |
MS.gene050979.t1 | MTR_3g096920 | 36.025 | 161 | 55 | 6 | 12 | 131 | 7 | 160 | 2.44e-18 | 84.7 |
MS.gene050979.t1 | MTR_3g098810 | 32.335 | 167 | 71 | 5 | 9 | 134 | 11 | 176 | 3.84e-18 | 83.2 |
MS.gene050979.t1 | MTR_5g041940 | 35.119 | 168 | 65 | 8 | 12 | 140 | 3 | 165 | 3.87e-18 | 83.6 |
MS.gene050979.t1 | MTR_6g032770 | 36.719 | 128 | 50 | 3 | 12 | 109 | 18 | 144 | 4.72e-18 | 85.1 |
MS.gene050979.t1 | MTR_7g011120 | 42.857 | 126 | 39 | 5 | 14 | 109 | 10 | 132 | 8.71e-18 | 83.6 |
MS.gene050979.t1 | MTR_1g097300 | 37.419 | 155 | 56 | 7 | 5 | 127 | 13 | 158 | 1.39e-17 | 84.7 |
MS.gene050979.t1 | MTR_8g467490 | 32.727 | 165 | 66 | 5 | 15 | 135 | 17 | 180 | 1.53e-17 | 84.0 |
MS.gene050979.t1 | MTR_7g085260 | 38.346 | 133 | 48 | 5 | 8 | 108 | 14 | 144 | 2.16e-17 | 83.2 |
MS.gene050979.t1 | MTR_3g096920 | 39.370 | 127 | 43 | 4 | 12 | 108 | 7 | 129 | 2.40e-17 | 82.4 |
MS.gene050979.t1 | MTR_4g075980 | 36.875 | 160 | 65 | 7 | 15 | 138 | 18 | 177 | 3.02e-17 | 82.0 |
MS.gene050979.t1 | MTR_3g098810 | 36.923 | 130 | 51 | 4 | 9 | 108 | 11 | 139 | 3.24e-17 | 79.0 |
MS.gene050979.t1 | MTR_5g040420 | 29.744 | 195 | 92 | 5 | 9 | 159 | 10 | 203 | 8.27e-17 | 81.6 |
MS.gene050979.t1 | MTR_0036s0150 | 36.000 | 175 | 65 | 8 | 15 | 144 | 8 | 180 | 8.75e-17 | 82.4 |
MS.gene050979.t1 | MTR_1g090720 | 33.962 | 159 | 55 | 6 | 15 | 128 | 45 | 198 | 2.50e-16 | 80.9 |
MS.gene050979.t1 | MTR_4g134460 | 34.211 | 152 | 67 | 5 | 10 | 129 | 52 | 202 | 4.99e-16 | 79.7 |
MS.gene050979.t1 | MTR_8g059170 | 29.302 | 215 | 109 | 8 | 12 | 187 | 14 | 224 | 9.15e-16 | 77.8 |
MS.gene050979.t1 | MTR_2g086690 | 32.692 | 156 | 61 | 5 | 13 | 125 | 5 | 159 | 1.94e-15 | 75.9 |
MS.gene050979.t1 | MTR_8g093790 | 32.903 | 155 | 72 | 6 | 12 | 144 | 10 | 154 | 7.65e-15 | 72.8 |
MS.gene050979.t1 | MTR_4g094302 | 28.916 | 166 | 80 | 6 | 12 | 142 | 11 | 173 | 1.56e-14 | 72.0 |
MS.gene050979.t1 | MTR_4g094302 | 35.537 | 121 | 51 | 5 | 12 | 108 | 11 | 128 | 6.68e-14 | 69.3 |
MS.gene050979.t1 | MTR_7g070140 | 31.667 | 120 | 63 | 3 | 47 | 165 | 27 | 128 | 1.31e-12 | 65.1 |
MS.gene050979.t1 | MTR_3g096400 | 30.065 | 153 | 67 | 4 | 12 | 125 | 7 | 158 | 2.28e-11 | 63.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene050979.t1 | AT4G01550 | 41.954 | 174 | 65 | 4 | 14 | 154 | 6 | 176 | 9.37e-33 | 128 |
MS.gene050979.t1 | AT4G01520 | 32.456 | 228 | 104 | 6 | 13 | 197 | 5 | 225 | 2.46e-29 | 115 |
MS.gene050979.t1 | AT4G01540 | 32.599 | 227 | 103 | 6 | 14 | 197 | 6 | 225 | 3.73e-28 | 114 |
MS.gene050979.t1 | AT4G01540 | 32.599 | 227 | 103 | 6 | 14 | 197 | 6 | 225 | 3.93e-28 | 114 |
MS.gene050979.t1 | AT4G01540 | 33.333 | 228 | 100 | 7 | 14 | 197 | 6 | 225 | 5.25e-28 | 114 |
MS.gene050979.t1 | AT4G01540 | 33.333 | 228 | 100 | 7 | 14 | 197 | 6 | 225 | 8.54e-28 | 114 |
MS.gene050979.t1 | AT3G49530 | 39.752 | 161 | 56 | 6 | 8 | 130 | 9 | 166 | 6.56e-27 | 111 |
MS.gene050979.t1 | AT3G49530 | 39.752 | 161 | 56 | 6 | 8 | 130 | 9 | 166 | 1.15e-26 | 111 |
MS.gene050979.t1 | AT5G24590 | 39.375 | 160 | 58 | 5 | 8 | 130 | 9 | 166 | 1.58e-25 | 107 |
MS.gene050979.t1 | AT1G33060 | 39.873 | 158 | 55 | 5 | 8 | 128 | 20 | 174 | 2.77e-25 | 108 |
MS.gene050979.t1 | AT4G35580 | 37.654 | 162 | 61 | 5 | 8 | 132 | 5 | 163 | 3.10e-25 | 107 |
MS.gene050979.t1 | AT1G33060 | 39.873 | 158 | 55 | 5 | 8 | 128 | 20 | 174 | 3.14e-25 | 107 |
MS.gene050979.t1 | AT4G35580 | 37.654 | 162 | 61 | 5 | 8 | 132 | 5 | 163 | 3.23e-25 | 107 |
MS.gene050979.t1 | AT4G35580 | 37.654 | 162 | 61 | 5 | 8 | 132 | 5 | 163 | 3.88e-25 | 107 |
MS.gene050979.t1 | AT3G17730 | 37.209 | 172 | 64 | 7 | 12 | 142 | 6 | 174 | 1.18e-24 | 101 |
MS.gene050979.t1 | AT2G24430 | 37.908 | 153 | 60 | 5 | 12 | 130 | 16 | 167 | 6.30e-24 | 101 |
MS.gene050979.t1 | AT2G24430 | 37.908 | 153 | 60 | 5 | 12 | 130 | 16 | 167 | 6.30e-24 | 101 |
MS.gene050979.t1 | AT3G10490 | 38.816 | 152 | 52 | 5 | 15 | 128 | 30 | 178 | 9.34e-24 | 99.0 |
MS.gene050979.t1 | AT4G17980 | 32.068 | 237 | 112 | 8 | 12 | 202 | 6 | 239 | 1.15e-23 | 99.4 |
MS.gene050979.t1 | AT4G17980 | 32.068 | 237 | 112 | 8 | 12 | 202 | 6 | 239 | 2.16e-23 | 99.4 |
MS.gene050979.t1 | AT3G10490 | 38.816 | 152 | 52 | 5 | 15 | 128 | 30 | 178 | 2.61e-23 | 101 |
MS.gene050979.t1 | AT3G10480 | 38.158 | 152 | 53 | 5 | 15 | 128 | 30 | 178 | 3.93e-23 | 100 |
MS.gene050979.t1 | AT3G10480 | 38.411 | 151 | 53 | 5 | 15 | 128 | 30 | 177 | 4.68e-23 | 100 |
MS.gene050979.t1 | AT5G17260 | 38.065 | 155 | 55 | 5 | 12 | 128 | 6 | 157 | 6.15e-23 | 100 |
MS.gene050979.t1 | AT1G12260 | 37.580 | 157 | 59 | 5 | 8 | 128 | 3 | 156 | 6.52e-23 | 99.0 |
MS.gene050979.t1 | AT1G62700 | 37.580 | 157 | 59 | 5 | 8 | 128 | 3 | 156 | 7.48e-23 | 99.4 |
MS.gene050979.t1 | AT1G62700 | 37.580 | 157 | 59 | 5 | 8 | 128 | 3 | 156 | 7.48e-23 | 99.4 |
MS.gene050979.t1 | AT1G12260 | 37.580 | 157 | 59 | 5 | 8 | 128 | 3 | 156 | 8.65e-23 | 99.4 |
MS.gene050979.t1 | AT5G46590 | 40.000 | 160 | 56 | 6 | 12 | 133 | 6 | 163 | 9.58e-23 | 97.4 |
MS.gene050979.t1 | AT5G62380 | 37.580 | 157 | 59 | 5 | 8 | 128 | 3 | 156 | 2.49e-22 | 97.4 |
MS.gene050979.t1 | AT5G62380 | 37.580 | 157 | 59 | 5 | 8 | 128 | 3 | 156 | 2.49e-22 | 97.4 |
MS.gene050979.t1 | AT3G15170 | 38.065 | 155 | 58 | 5 | 12 | 129 | 20 | 173 | 6.98e-22 | 95.5 |
MS.gene050979.t1 | AT1G69490 | 37.179 | 156 | 56 | 6 | 12 | 128 | 9 | 161 | 7.04e-22 | 94.4 |
MS.gene050979.t1 | AT1G65910 | 38.065 | 155 | 56 | 5 | 12 | 129 | 6 | 157 | 7.31e-22 | 97.8 |
MS.gene050979.t1 | AT1G33280 | 39.474 | 152 | 54 | 5 | 12 | 128 | 8 | 156 | 1.12e-21 | 94.7 |
MS.gene050979.t1 | AT5G39610 | 37.662 | 154 | 56 | 6 | 12 | 128 | 20 | 170 | 1.61e-21 | 94.0 |
MS.gene050979.t1 | AT3G03200 | 37.419 | 155 | 56 | 5 | 12 | 128 | 6 | 157 | 4.46e-21 | 95.1 |
MS.gene050979.t1 | AT1G76420 | 35.714 | 154 | 58 | 5 | 12 | 128 | 22 | 171 | 4.84e-21 | 93.2 |
MS.gene050979.t1 | AT5G13180 | 34.899 | 149 | 65 | 4 | 11 | 128 | 13 | 160 | 4.95e-21 | 91.7 |
MS.gene050979.t1 | AT5G53950 | 40.310 | 129 | 46 | 3 | 10 | 108 | 15 | 142 | 7.57e-21 | 93.2 |
MS.gene050979.t1 | AT5G66300 | 36.364 | 154 | 58 | 5 | 12 | 128 | 12 | 162 | 1.00e-20 | 91.7 |
MS.gene050979.t1 | AT3G04060 | 35.714 | 154 | 60 | 6 | 12 | 128 | 20 | 171 | 1.29e-20 | 92.0 |
MS.gene050979.t1 | AT5G07680 | 38.065 | 155 | 54 | 7 | 12 | 128 | 3 | 153 | 1.37e-20 | 91.7 |
MS.gene050979.t1 | AT5G07680 | 38.065 | 155 | 54 | 7 | 12 | 128 | 17 | 167 | 1.50e-20 | 92.0 |
MS.gene050979.t1 | AT2G18060 | 35.976 | 164 | 66 | 5 | 12 | 139 | 9 | 169 | 2.60e-20 | 91.7 |
MS.gene050979.t1 | AT2G18060 | 35.976 | 164 | 66 | 5 | 12 | 139 | 9 | 169 | 2.60e-20 | 91.7 |
MS.gene050979.t1 | AT1G79580 | 38.158 | 152 | 57 | 5 | 12 | 128 | 17 | 166 | 3.78e-20 | 91.3 |
MS.gene050979.t1 | AT1G79580 | 38.158 | 152 | 57 | 5 | 12 | 128 | 17 | 166 | 3.78e-20 | 91.3 |
MS.gene050979.t1 | AT1G79580 | 38.158 | 152 | 57 | 5 | 12 | 128 | 17 | 166 | 3.78e-20 | 91.3 |
MS.gene050979.t1 | AT1G79580 | 38.158 | 152 | 57 | 5 | 12 | 128 | 17 | 166 | 3.78e-20 | 91.3 |
MS.gene050979.t1 | AT1G79580 | 38.158 | 152 | 57 | 5 | 12 | 128 | 17 | 166 | 3.78e-20 | 91.3 |
MS.gene050979.t1 | AT5G46590 | 40.769 | 130 | 43 | 4 | 12 | 109 | 6 | 133 | 7.79e-20 | 89.0 |
MS.gene050979.t1 | AT5G18270 | 29.536 | 237 | 117 | 7 | 9 | 206 | 18 | 243 | 7.90e-20 | 89.7 |
MS.gene050979.t1 | AT2G33480 | 36.486 | 148 | 61 | 5 | 11 | 128 | 14 | 158 | 8.35e-20 | 88.6 |
MS.gene050979.t1 | AT5G18270 | 29.536 | 237 | 117 | 7 | 9 | 206 | 18 | 243 | 8.87e-20 | 89.7 |
MS.gene050979.t1 | AT1G54330 | 38.411 | 151 | 56 | 5 | 12 | 128 | 6 | 153 | 9.16e-20 | 89.4 |
MS.gene050979.t1 | AT3G61910 | 31.280 | 211 | 78 | 8 | 11 | 167 | 10 | 207 | 9.75e-20 | 89.7 |
MS.gene050979.t1 | AT1G02230 | 37.255 | 153 | 60 | 5 | 13 | 131 | 4 | 154 | 1.34e-19 | 89.7 |
MS.gene050979.t1 | AT2G33480 | 36.000 | 150 | 61 | 5 | 11 | 128 | 14 | 160 | 1.42e-19 | 88.2 |
MS.gene050979.t1 | AT4G10350 | 36.686 | 169 | 65 | 6 | 12 | 141 | 9 | 174 | 1.44e-19 | 89.4 |
MS.gene050979.t1 | AT3G29035 | 40.945 | 127 | 42 | 5 | 12 | 108 | 24 | 147 | 1.96e-19 | 88.6 |
MS.gene050979.t1 | AT5G22380 | 34.810 | 158 | 60 | 5 | 10 | 125 | 3 | 159 | 3.27e-19 | 86.3 |
MS.gene050979.t1 | AT1G32510 | 32.895 | 228 | 86 | 10 | 12 | 183 | 6 | 222 | 3.54e-19 | 87.0 |
MS.gene050979.t1 | AT3G04070 | 34.356 | 163 | 61 | 5 | 12 | 129 | 10 | 171 | 3.95e-19 | 88.2 |
MS.gene050979.t1 | AT1G56010 | 34.194 | 155 | 62 | 4 | 12 | 128 | 19 | 171 | 3.96e-19 | 87.8 |
MS.gene050979.t1 | AT4G36160 | 35.948 | 153 | 59 | 5 | 12 | 128 | 10 | 159 | 4.80e-19 | 88.2 |
MS.gene050979.t1 | AT4G36160 | 35.948 | 153 | 59 | 5 | 12 | 128 | 10 | 159 | 4.80e-19 | 88.2 |
MS.gene050979.t1 | AT4G36160 | 35.948 | 153 | 59 | 5 | 12 | 128 | 14 | 163 | 5.16e-19 | 88.2 |
MS.gene050979.t1 | AT3G15510 | 33.523 | 176 | 68 | 6 | 16 | 143 | 21 | 195 | 5.58e-19 | 87.8 |
MS.gene050979.t1 | AT1G01720 | 35.220 | 159 | 60 | 6 | 9 | 128 | 4 | 158 | 6.61e-19 | 86.7 |
MS.gene050979.t1 | AT3G15500 | 33.140 | 172 | 72 | 7 | 12 | 146 | 14 | 179 | 9.62e-19 | 86.7 |
MS.gene050979.t1 | AT3G10500 | 34.272 | 213 | 92 | 12 | 15 | 188 | 12 | 215 | 1.20e-18 | 88.2 |
MS.gene050979.t1 | AT5G39820 | 39.706 | 136 | 51 | 3 | 10 | 115 | 18 | 152 | 1.53e-18 | 86.3 |
MS.gene050979.t1 | AT3G12910 | 28.832 | 274 | 133 | 11 | 15 | 231 | 24 | 292 | 2.17e-18 | 85.1 |
MS.gene050979.t1 | AT5G04410 | 36.842 | 152 | 56 | 8 | 15 | 129 | 12 | 160 | 2.37e-18 | 87.0 |
MS.gene050979.t1 | AT2G17040 | 34.568 | 162 | 70 | 5 | 15 | 140 | 9 | 170 | 2.53e-18 | 84.7 |
MS.gene050979.t1 | AT1G26870 | 30.380 | 237 | 90 | 8 | 15 | 181 | 19 | 250 | 3.24e-18 | 86.3 |
MS.gene050979.t1 | AT3G12977 | 32.967 | 182 | 75 | 8 | 12 | 153 | 18 | 192 | 6.65e-18 | 83.6 |
MS.gene050979.t1 | AT1G52890 | 32.768 | 177 | 72 | 7 | 6 | 145 | 8 | 174 | 1.07e-17 | 83.6 |
MS.gene050979.t1 | AT3G44290 | 33.540 | 161 | 63 | 7 | 1 | 130 | 11 | 158 | 1.18e-17 | 81.6 |
MS.gene050979.t1 | AT1G34190 | 37.662 | 154 | 52 | 6 | 15 | 129 | 19 | 167 | 1.54e-17 | 84.7 |
MS.gene050979.t1 | AT1G01010 | 37.013 | 154 | 60 | 4 | 14 | 130 | 5 | 158 | 1.72e-17 | 84.0 |
MS.gene050979.t1 | AT4G27410 | 30.332 | 211 | 98 | 9 | 12 | 180 | 14 | 217 | 2.29e-17 | 82.4 |
MS.gene050979.t1 | AT4G28530 | 31.098 | 164 | 67 | 5 | 12 | 129 | 10 | 173 | 2.43e-17 | 82.8 |
MS.gene050979.t1 | AT3G44290 | 33.540 | 161 | 63 | 7 | 1 | 130 | 11 | 158 | 5.10e-17 | 81.6 |
MS.gene050979.t1 | AT1G32770 | 35.329 | 167 | 53 | 7 | 12 | 128 | 16 | 177 | 8.31e-17 | 81.3 |
MS.gene050979.t1 | AT1G77450 | 33.143 | 175 | 73 | 6 | 11 | 147 | 9 | 177 | 1.81e-16 | 79.0 |
MS.gene050979.t1 | AT5G09330 | 25.448 | 279 | 140 | 8 | 15 | 231 | 9 | 281 | 7.00e-16 | 79.3 |
MS.gene050979.t1 | AT5G09330 | 25.448 | 279 | 140 | 8 | 15 | 231 | 9 | 281 | 7.00e-16 | 79.3 |
MS.gene050979.t1 | AT5G09330 | 25.448 | 279 | 140 | 8 | 15 | 231 | 9 | 281 | 7.00e-16 | 79.3 |
MS.gene050979.t1 | AT5G09330 | 25.448 | 279 | 140 | 8 | 15 | 231 | 9 | 281 | 7.00e-16 | 79.3 |
MS.gene050979.t1 | AT5G09330 | 25.448 | 279 | 140 | 8 | 15 | 231 | 9 | 281 | 7.00e-16 | 79.3 |
MS.gene050979.t1 | AT3G10480 | 43.023 | 86 | 40 | 3 | 50 | 128 | 128 | 211 | 7.44e-16 | 79.3 |
MS.gene050979.t1 | AT2G02450 | 34.247 | 146 | 63 | 5 | 15 | 128 | 54 | 198 | 2.15e-15 | 77.4 |
MS.gene050979.t1 | AT3G10490 | 45.000 | 80 | 35 | 3 | 56 | 128 | 1 | 78 | 2.28e-15 | 77.0 |
MS.gene050979.t1 | AT3G10490 | 45.000 | 80 | 35 | 3 | 56 | 128 | 1 | 78 | 2.28e-15 | 77.0 |
MS.gene050979.t1 | AT2G02450 | 34.247 | 146 | 63 | 5 | 15 | 128 | 54 | 198 | 2.35e-15 | 77.4 |
MS.gene050979.t1 | AT4G27410 | 28.070 | 228 | 98 | 9 | 12 | 180 | 14 | 234 | 4.96e-15 | 75.5 |
MS.gene050979.t1 | AT1G02250 | 35.714 | 154 | 63 | 5 | 13 | 132 | 4 | 155 | 1.32e-14 | 74.7 |
MS.gene050979.t1 | AT3G12977 | 36.842 | 114 | 57 | 4 | 50 | 153 | 31 | 139 | 1.74e-14 | 72.8 |
MS.gene050979.t1 | AT1G56010 | 40.909 | 88 | 41 | 3 | 50 | 128 | 19 | 104 | 5.80e-14 | 71.6 |
MS.gene050979.t1 | AT1G52880 | 34.545 | 165 | 62 | 6 | 16 | 135 | 21 | 184 | 1.96e-13 | 70.9 |
MS.gene050979.t1 | AT2G33480 | 38.636 | 88 | 46 | 3 | 47 | 128 | 18 | 103 | 1.80e-12 | 66.6 |
MS.gene050979.t1 | AT5G64530 | 33.333 | 120 | 51 | 4 | 12 | 108 | 3 | 116 | 6.98e-12 | 64.3 |
MS.gene050979.t1 | AT5G64530 | 33.333 | 120 | 51 | 4 | 12 | 108 | 3 | 116 | 8.09e-12 | 63.5 |
Find 61 sgRNAs with CRISPR-Local
Find 127 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATTGATTCCATATTTATTTC+TGG | 0.145339 | 8.3:+68368083 | None:intergenic |
AGGGGTAGCAATAATATTAT+TGG | 0.231520 | 8.3:-68368912 | MS.gene050979:CDS |
AAATATGGAATCAATATTTC+AGG | 0.281347 | 8.3:-68368075 | MS.gene050979:CDS |
GCATCGTGAAGTGGCGAGTT+TGG | 0.289715 | 8.3:+68367999 | None:intergenic |
GATGTTGTCATTTCTAAAAT+AGG | 0.297612 | 8.3:+68367977 | None:intergenic |
GATGATTATTGACGGGGATT+TGG | 0.300093 | 8.3:-68367901 | MS.gene050979:CDS |
TACTATAGTGGTCGTGTTCC+TGG | 0.304206 | 8.3:-68368870 | MS.gene050979:CDS |
CGGAAAGGATCAAAAGATTA+AGG | 0.310067 | 8.3:-68368937 | MS.gene050979:CDS |
TTTAAAAGGACAACTAATAA+TGG | 0.327657 | 8.3:-68368975 | MS.gene050979:CDS |
GGGGTAGCAATAATATTATT+GGG | 0.331309 | 8.3:-68368911 | MS.gene050979:CDS |
CAAAGAGTAAGAGGTTTAAA+AGG | 0.342416 | 8.3:-68368989 | MS.gene050979:CDS |
GTCAAGAGTCGGAGGAAATA+AGG | 0.354940 | 8.3:+68369308 | None:intergenic |
TACTTCGCCAGAAATAAATA+TGG | 0.358384 | 8.3:-68368090 | MS.gene050979:CDS |
CATCGTGAAGTGGCGAGTTT+GGG | 0.375477 | 8.3:+68368000 | None:intergenic |
TTTCTTGAACATCCTAGTTC+AGG | 0.382346 | 8.3:-68367463 | MS.gene050979:CDS |
TCCTCTTCAATAGTTTCAAA+TGG | 0.383569 | 8.3:+68367942 | None:intergenic |
ATAAGTATGCAAAGAGTAAG+AGG | 0.388091 | 8.3:-68368998 | MS.gene050979:intron |
CCAGACCGAGTTGTTGAAAA+TGG | 0.393228 | 8.3:-68367865 | MS.gene050979:CDS |
GGATCAAAAGATTAAGGTTA+GGG | 0.409954 | 8.3:-68368931 | MS.gene050979:CDS |
AGGATCAAAAGATTAAGGTT+AGG | 0.412020 | 8.3:-68368932 | MS.gene050979:CDS |
TACTTGCATACATCAACTTC+AGG | 0.414938 | 8.3:+68369180 | None:intergenic |
AAGACTCTTGTTTACTATAG+TGG | 0.415807 | 8.3:-68368882 | MS.gene050979:CDS |
TTCCTGGTGTTAAAAGCAGC+TGG | 0.431255 | 8.3:-68368854 | MS.gene050979:CDS |
TGGCTCGTCTTGGATGATAC+TGG | 0.439270 | 8.3:+68367209 | None:intergenic |
TCGGAACTCATGTGTCTACT+TGG | 0.451021 | 8.3:+68368268 | None:intergenic |
TTGTTGAAAATGGTCTACTA+TGG | 0.451094 | 8.3:-68367855 | MS.gene050979:CDS |
TTCAACTGCAGATATACCTT+TGG | 0.460879 | 8.3:-68367290 | MS.gene050979:CDS |
ACTCTTGACCATGTTCCTGT+TGG | 0.471228 | 8.3:-68369294 | MS.gene050979:CDS |
GAAACAGATATTTGTGATGA+AGG | 0.487684 | 8.3:-68368295 | MS.gene050979:CDS |
ATTGTTAAAAGATAGAAAAC+AGG | 0.487790 | 8.3:+68367384 | None:intergenic |
CTTACAAGCTCTTCATCTGT+TGG | 0.488308 | 8.3:+68369258 | None:intergenic |
TCAATTCGATGATTATTGAC+GGG | 0.491118 | 8.3:-68367908 | MS.gene050979:CDS |
TTCAATCTCTGAAAATGAGC+AGG | 0.497588 | 8.3:-68368033 | MS.gene050979:CDS |
GGTCTGAATCTGAATCCAAC+AGG | 0.502719 | 8.3:+68369279 | None:intergenic |
AAACAGATATTTGTGATGAA+GGG | 0.503954 | 8.3:-68368294 | MS.gene050979:CDS |
TCCATTTGAAACTATTGAAG+AGG | 0.512914 | 8.3:-68367943 | MS.gene050979:CDS |
GTCAATTCGATGATTATTGA+CGG | 0.514303 | 8.3:-68367909 | MS.gene050979:CDS |
GCATGGTATTCGCCTGAACT+AGG | 0.529730 | 8.3:+68367451 | None:intergenic |
ACAAACCTTGTCATCTTCAA+AGG | 0.536374 | 8.3:+68368806 | None:intergenic |
GACATGAAGATGGCTCGTCT+TGG | 0.542365 | 8.3:+68367199 | None:intergenic |
CTAAAATAGGCATCGTGAAG+TGG | 0.556105 | 8.3:+68367990 | None:intergenic |
AGGTATAACATTGTTGACAA+TGG | 0.563065 | 8.3:+68369200 | None:intergenic |
CGATATTCTTCATACTTCAA+CGG | 0.570808 | 8.3:-68367488 | MS.gene050979:CDS |
TCCCTCAAAATCATCTCGAA+AGG | 0.583285 | 8.3:+68367333 | None:intergenic |
AACAGATATTTGTGATGAAG+GGG | 0.592526 | 8.3:-68368293 | MS.gene050979:CDS |
TCCTGGTGTTAAAAGCAGCT+GGG | 0.595945 | 8.3:-68368853 | MS.gene050979:CDS |
ATTGACGGGGATTTGGACAA+CGG | 0.596214 | 8.3:-68367894 | MS.gene050979:CDS |
CAATTCGATGATTATTGACG+GGG | 0.596678 | 8.3:-68367907 | MS.gene050979:CDS |
ATCTGCAGTTGAATCACAAG+AGG | 0.597794 | 8.3:+68367300 | None:intergenic |
GTGAAGTGGCGAGTTTGGGA+TGG | 0.598328 | 8.3:+68368004 | None:intergenic |
TACCACCTTTGAAGATGACA+AGG | 0.610149 | 8.3:-68368811 | MS.gene050979:intron |
ATCTGAATCCAACAGGAACA+TGG | 0.616076 | 8.3:+68369286 | None:intergenic |
AACCTTGTCATCTTCAAAGG+TGG | 0.630537 | 8.3:+68368809 | None:intergenic |
ATACAATTGATCGTCTCCAA+AGG | 0.631084 | 8.3:+68367274 | None:intergenic |
ACAGGAACATGGTCAAGAGT+CGG | 0.636129 | 8.3:+68369297 | None:intergenic |
GATCAAAAGATTAAGGTTAG+GGG | 0.643015 | 8.3:-68368930 | MS.gene050979:CDS |
AAATTGTCGAAATCAATGCA+TGG | 0.648209 | 8.3:-68367424 | MS.gene050979:CDS |
TGCTGAAGTAGTCTCTACGC+CGG | 0.650251 | 8.3:-68367817 | MS.gene050979:intron |
TATGGAATCAATATTTCAGG+CGG | 0.651020 | 8.3:-68368072 | MS.gene050979:CDS |
GGAACATGGTCAAGAGTCGG+AGG | 0.664688 | 8.3:+68369300 | None:intergenic |
GCTGCTTCAAGAGGATCTTG+AGG | 0.670068 | 8.3:-68367169 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAGATGAAAAACATTAAAA+AGG | + | chr8.3:68367406-68367425 | None:intergenic | 15.0% |
!! | ATTTCTATTATCATTTATCA+AGG | + | chr8.3:68368294-68368313 | None:intergenic | 15.0% |
!! | TTTGAACAATATATATTTAC+CGG | + | chr8.3:68368691-68368710 | None:intergenic | 15.0% |
!!! | TTTTATGAGAAAATAATGAT+GGG | + | chr8.3:68367377-68367396 | None:intergenic | 15.0% |
!!! | TTTTTATGAGAAAATAATGA+TGG | + | chr8.3:68367378-68367397 | None:intergenic | 15.0% |
!! | AAATATGGAATCAATATTTC+AGG | - | chr8.3:68368411-68368430 | MS.gene050979:intron | 20.0% |
!! | AGAAAAAAGTTTATAAGCAT+TGG | - | chr8.3:68368050-68368069 | MS.gene050979:CDS | 20.0% |
!! | ATACACACTTTAATATCATT+TGG | + | chr8.3:68368716-68368735 | None:intergenic | 20.0% |
!! | ATTGTTAAAAGATAGAAAAC+AGG | + | chr8.3:68369105-68369124 | None:intergenic | 20.0% |
!! | TTTAAAAGGACAACTAATAA+TGG | - | chr8.3:68367511-68367530 | MS.gene050979:intron | 20.0% |
!! | TTTATGAGAAAATAATGATG+GGG | + | chr8.3:68367376-68367395 | None:intergenic | 20.0% |
!! | TTTGCATACTTATAATCAAT+AGG | + | chr8.3:68367481-68367500 | None:intergenic | 20.0% |
!!! | ATGTTTTTCTTTAATAGAGT+CGG | - | chr8.3:68368866-68368885 | MS.gene050979:CDS | 20.0% |
!!! | ATTGATTCCATATTTATTTC+TGG | + | chr8.3:68368406-68368425 | None:intergenic | 20.0% |
!!! | GAACTTGTATTTGTTTTTAT+AGG | - | chr8.3:68368363-68368382 | MS.gene050979:intron | 20.0% |
!!! | TGTTTTCTATCTTTTAACAA+TGG | - | chr8.3:68369104-68369123 | MS.gene050979:intron | 20.0% |
!!! | TTAATATTTTCCTATCTGAT+TGG | - | chr8.3:68367857-68367876 | MS.gene050979:CDS | 20.0% |
!!! | TTGTTTGTTTTTTTTTTACC+TGG | + | chr8.3:68367348-68367367 | None:intergenic | 20.0% |
! | AAAACACAAATCACAAACAA+TGG | - | chr8.3:68367917-68367936 | MS.gene050979:CDS | 25.0% |
! | AAACAGATATTTGTGATGAA+GGG | - | chr8.3:68368192-68368211 | MS.gene050979:intron | 25.0% |
! | CATTCTATTAGCATTTCAAA+AGG | + | chr8.3:68368935-68368954 | None:intergenic | 25.0% |
!! | AAATTTCGAGAACAAAGTTT+TGG | - | chr8.3:68368310-68368329 | MS.gene050979:CDS | 25.0% |
!! | GAAAATCAAGAAACTTTTGA+AGG | - | chr8.3:68368245-68368264 | MS.gene050979:CDS | 25.0% |
!! | GTTCTGAATTTGATGTTTAT+TGG | - | chr8.3:68367882-68367901 | MS.gene050979:CDS | 25.0% |
!! | TCTTTTACAATTTTACAGTG+TGG | - | chr8.3:68368975-68368994 | MS.gene050979:CDS | 25.0% |
!!! | ATAGATTGTGAAAAAGTACT+TGG | - | chr8.3:68368810-68368829 | MS.gene050979:intron | 25.0% |
!!! | GATGTTGTCATTTCTAAAAT+AGG | + | chr8.3:68368512-68368531 | None:intergenic | 25.0% |
AAAAGTCCGCTACAAAATTT+CGG | + | chr8.3:68368120-68368139 | None:intergenic | 30.0% | |
AAATTGTCGAAATCAATGCA+TGG | - | chr8.3:68369062-68369081 | MS.gene050979:intron | 30.0% | |
AACAGATATTTGTGATGAAG+GGG | - | chr8.3:68368193-68368212 | MS.gene050979:intron | 30.0% | |
AGGATCAAAAGATTAAGGTT+AGG | - | chr8.3:68367554-68367573 | MS.gene050979:intron | 30.0% | |
AGGGGTAGCAATAATATTAT+TGG | - | chr8.3:68367574-68367593 | MS.gene050979:intron | 30.0% | |
AGGTATAACATTGTTGACAA+TGG | + | chr8.3:68367289-68367308 | None:intergenic | 30.0% | |
ATAAGTATGCAAAGAGTAAG+AGG | - | chr8.3:68367488-68367507 | MS.gene050979:CDS | 30.0% | |
CAAAGAGTAAGAGGTTTAAA+AGG | - | chr8.3:68367497-68367516 | MS.gene050979:intron | 30.0% | |
CGATATTCTTCATACTTCAA+CGG | - | chr8.3:68368998-68369017 | MS.gene050979:intron | 30.0% | |
GAAACAGATATTTGTGATGA+AGG | - | chr8.3:68368191-68368210 | MS.gene050979:intron | 30.0% | |
GATCAAAAGATTAAGGTTAG+GGG | - | chr8.3:68367556-68367575 | MS.gene050979:intron | 30.0% | |
GGATCAAAAGATTAAGGTTA+GGG | - | chr8.3:68367555-68367574 | MS.gene050979:intron | 30.0% | |
GGGGTAGCAATAATATTATT+GGG | - | chr8.3:68367575-68367594 | MS.gene050979:intron | 30.0% | |
GTCAATTCGATGATTATTGA+CGG | - | chr8.3:68368577-68368596 | MS.gene050979:intron | 30.0% | |
TACTTCGCCAGAAATAAATA+TGG | - | chr8.3:68368396-68368415 | MS.gene050979:intron | 30.0% | |
TATGGAATCAATATTTCAGG+CGG | - | chr8.3:68368414-68368433 | MS.gene050979:intron | 30.0% | |
TCAATTCGATGATTATTGAC+GGG | - | chr8.3:68368578-68368597 | MS.gene050979:intron | 30.0% | |
TCCTCTTCAATAGTTTCAAA+TGG | + | chr8.3:68368547-68368566 | None:intergenic | 30.0% | |
TTGTTGAAAATGGTCTACTA+TGG | - | chr8.3:68368631-68368650 | MS.gene050979:intron | 30.0% | |
! | AAGACTCTTGTTTACTATAG+TGG | - | chr8.3:68367604-68367623 | MS.gene050979:intron | 30.0% |
! | CAAAAGTTTCTTGATTTTCG+TGG | + | chr8.3:68368244-68368263 | None:intergenic | 30.0% |
! | CTTAATCTTTTGATCCTTTC+CGG | + | chr8.3:68367551-68367570 | None:intergenic | 30.0% |
! | CTTTTCTTTATACTGTGATG+TGG | - | chr8.3:68368896-68368915 | MS.gene050979:CDS | 30.0% |
! | GGACAACTAATAATGGTTTT+TGG | - | chr8.3:68367518-68367537 | MS.gene050979:intron | 30.0% |
! | TATCATCCGAAATTTTGTAG+CGG | - | chr8.3:68368111-68368130 | MS.gene050979:intron | 30.0% |
! | TCCATTTGAAACTATTGAAG+AGG | - | chr8.3:68368543-68368562 | MS.gene050979:intron | 30.0% |
! | TTCAGTTTTTGAATGTTAGC+AGG | - | chr8.3:68368019-68368038 | MS.gene050979:CDS | 30.0% |
!! | ATTTCGACAATTTTGATGCA+TGG | + | chr8.3:68369055-68369074 | None:intergenic | 30.0% |
!!! | GGTTTGTTTTGTTACAACAA+AGG | - | chr8.3:68367696-68367715 | MS.gene050979:intron | 30.0% |
!!! | GTAACTTGTTTTTGAGATAG+TGG | + | chr8.3:68367254-68367273 | None:intergenic | 30.0% |
!!! | TTCATCTTTTTCAGCTTGTT+CGG | - | chr8.3:68367417-68367436 | MS.gene050979:CDS | 30.0% |
ACAAACCTTGTCATCTTCAA+AGG | + | chr8.3:68367683-68367702 | None:intergenic | 35.0% | |
AGCTGAGAAAAAAGCTGAAA+AGG | - | chr8.3:68368163-68368182 | MS.gene050979:intron | 35.0% | |
ATACAATTGATCGTCTCCAA+AGG | + | chr8.3:68369215-68369234 | None:intergenic | 35.0% | |
ATGTATGCAAGTATGAACCT+TGG | - | chr8.3:68367316-68367335 | MS.gene050979:CDS | 35.0% | |
CAATTCGATGATTATTGACG+GGG | - | chr8.3:68368579-68368598 | MS.gene050979:intron | 35.0% | |
CGGAAAGGATCAAAAGATTA+AGG | - | chr8.3:68367549-68367568 | MS.gene050979:intron | 35.0% | |
GACACAAGAAAAACCATTCT+GGG | + | chr8.3:68367459-68367478 | None:intergenic | 35.0% | |
TAAAATCAGATGACCCAGAA+TGG | - | chr8.3:68367443-68367462 | MS.gene050979:CDS | 35.0% | |
TACTTGCATACATCAACTTC+AGG | + | chr8.3:68367309-68367328 | None:intergenic | 35.0% | |
TATTAGTGAACCATCCAATG+CGG | - | chr8.3:68368740-68368759 | MS.gene050979:intron | 35.0% | |
TCAGCATGTTTCATGTAGAA+AGG | + | chr8.3:68368343-68368362 | None:intergenic | 35.0% | |
TGTATGCAAGTATGAACCTT+GGG | - | chr8.3:68367317-68367336 | MS.gene050979:CDS | 35.0% | |
TTCAACTGCAGATATACCTT+TGG | - | chr8.3:68369196-68369215 | MS.gene050979:CDS | 35.0% | |
TTGAAGGAATTCCTGATGTA+AGG | - | chr8.3:68368261-68368280 | MS.gene050979:CDS | 35.0% | |
TTTCTTGAACATCCTAGTTC+AGG | - | chr8.3:68369023-68369042 | MS.gene050979:intron | 35.0% | |
! | ACCTTTCGAGATGATTTTGA+GGG | - | chr8.3:68369152-68369171 | MS.gene050979:intron | 35.0% |
! | AGCTCTTTTTGACATGAAGA+TGG | + | chr8.3:68369300-68369319 | None:intergenic | 35.0% |
! | AGTTTCTTGATTTTCGTGGT+CGG | + | chr8.3:68368240-68368259 | None:intergenic | 35.0% |
! | GCTCATTTTCAGAGATTGAA+GGG | + | chr8.3:68368453-68368472 | None:intergenic | 35.0% |
! | GTAGACCATTTTCAACAACT+CGG | + | chr8.3:68368629-68368648 | None:intergenic | 35.0% |
! | GTTTTTGCGTTTTCTTAGAG+TGG | + | chr8.3:68369258-68369277 | None:intergenic | 35.0% |
! | TACCTTTCGAGATGATTTTG+AGG | - | chr8.3:68369151-68369170 | MS.gene050979:intron | 35.0% |
! | TGCTCATTTTCAGAGATTGA+AGG | + | chr8.3:68368454-68368473 | None:intergenic | 35.0% |
! | TTCAATCTCTGAAAATGAGC+AGG | - | chr8.3:68368453-68368472 | MS.gene050979:intron | 35.0% |
!! | AATGGTTTTTGGAAAGCTAC+CGG | - | chr8.3:68367529-68367548 | MS.gene050979:intron | 35.0% |
!! | AGATGATTTTGAGGGATTAG+AGG | - | chr8.3:68369160-68369179 | MS.gene050979:intron | 35.0% |
!!! | AGCATTGGTTTGTTTTGTCT+TGG | - | chr8.3:68368065-68368084 | MS.gene050979:CDS | 35.0% |
AACCTTGTCATCTTCAAAGG+TGG | + | chr8.3:68367680-68367699 | None:intergenic | 40.0% | |
AAGGATGAACTCCTTACATC+AGG | + | chr8.3:68368275-68368294 | None:intergenic | 40.0% | |
ATCTGAATCCAACAGGAACA+TGG | + | chr8.3:68367203-68367222 | None:intergenic | 40.0% | |
ATCTGCAGTTGAATCACAAG+AGG | + | chr8.3:68369189-68369208 | None:intergenic | 40.0% | |
CTTACAAGCTCTTCATCTGT+TGG | + | chr8.3:68367231-68367250 | None:intergenic | 40.0% | |
GATGATTATTGACGGGGATT+TGG | - | chr8.3:68368585-68368604 | MS.gene050979:intron | 40.0% | |
GGACACAAGAAAAACCATTC+TGG | + | chr8.3:68367460-68367479 | None:intergenic | 40.0% | |
TAAAACTCATGTCACCGCAT+TGG | + | chr8.3:68368757-68368776 | None:intergenic | 40.0% | |
TCAAAAAGAGCTGCTTCAAG+AGG | - | chr8.3:68369308-68369327 | MS.gene050979:CDS | 40.0% | |
TCCCTCAAAATCATCTCGAA+AGG | + | chr8.3:68369156-68369175 | None:intergenic | 40.0% | |
TTCAGAACAGCCAATCAGAT+AGG | + | chr8.3:68367870-68367889 | None:intergenic | 40.0% | |
! | CATTTTCAGAGATTGAAGGG+AGG | + | chr8.3:68368450-68368469 | None:intergenic | 40.0% |
! | CTAAAATAGGCATCGTGAAG+TGG | + | chr8.3:68368499-68368518 | None:intergenic | 40.0% |
! | TACCACCTTTGAAGATGACA+AGG | - | chr8.3:68367675-68367694 | MS.gene050979:intron | 40.0% |
! | TTGCGTTTTCTTAGAGTGGA+AGG | + | chr8.3:68369254-68369273 | None:intergenic | 40.0% |
! | TTTTTACCTGGTAACTCCCA+AGG | + | chr8.3:68367336-68367355 | None:intergenic | 40.0% |
!! | TACCACATTTTAGCAATGCG+TGG | - | chr8.3:68368775-68368794 | MS.gene050979:intron | 40.0% |
!! | TTTTTGGAAAGCTACCGGAA+AGG | - | chr8.3:68367534-68367553 | MS.gene050979:intron | 40.0% |
!!! | ATCTTTTTCAGCTTGTTCGG+TGG | - | chr8.3:68367420-68367439 | MS.gene050979:CDS | 40.0% |
ACAGGAACATGGTCAAGAGT+CGG | + | chr8.3:68367192-68367211 | None:intergenic | 45.0% | |
ACTCTTGACCATGTTCCTGT+TGG | - | chr8.3:68367192-68367211 | MS.gene050979:CDS | 45.0% | |
ATTGACGGGGATTTGGACAA+CGG | - | chr8.3:68368592-68368611 | MS.gene050979:intron | 45.0% | |
CACCACGCATTGCTAAAATG+TGG | + | chr8.3:68368780-68368799 | None:intergenic | 45.0% | |
CCAGACCGAGTTGTTGAAAA+TGG | - | chr8.3:68368621-68368640 | MS.gene050979:intron | 45.0% | |
GGTCTGAATCTGAATCCAAC+AGG | + | chr8.3:68367210-68367229 | None:intergenic | 45.0% | |
GTCAAGAGTCGGAGGAAATA+AGG | + | chr8.3:68367181-68367200 | None:intergenic | 45.0% | |
TACTATAGTGGTCGTGTTCC+TGG | - | chr8.3:68367616-68367635 | MS.gene050979:intron | 45.0% | |
TATGAACCTTGGGAGTTACC+AGG | - | chr8.3:68367327-68367346 | MS.gene050979:CDS | 45.0% | |
TCGGAACTCATGTGTCTACT+TGG | + | chr8.3:68368221-68368240 | None:intergenic | 45.0% | |
! | CCATTTTCAACAACTCGGTC+TGG | + | chr8.3:68368624-68368643 | None:intergenic | 45.0% |
! | TCCTGGTGTTAAAAGCAGCT+GGG | - | chr8.3:68367633-68367652 | MS.gene050979:intron | 45.0% |
! | TTCCTGGTGTTAAAAGCAGC+TGG | - | chr8.3:68367632-68367651 | MS.gene050979:intron | 45.0% |
ACTCATGTCACCGCATTGGA+TGG | + | chr8.3:68368753-68368772 | None:intergenic | 50.0% | |
CATCGTGAAGTGGCGAGTTT+GGG | + | chr8.3:68368489-68368508 | None:intergenic | 50.0% | |
GACATGAAGATGGCTCGTCT+TGG | + | chr8.3:68369290-68369309 | None:intergenic | 50.0% | |
GCATGGTATTCGCCTGAACT+AGG | + | chr8.3:68369038-68369057 | None:intergenic | 50.0% | |
TGCTGAAGTAGTCTCTACGC+CGG | - | chr8.3:68368669-68368688 | MS.gene050979:intron | 50.0% | |
TGGCTCGTCTTGGATGATAC+TGG | + | chr8.3:68369280-68369299 | None:intergenic | 50.0% | |
!!! | ACCCAGCTGCTTTTAACACC+AGG | + | chr8.3:68367637-68367656 | None:intergenic | 50.0% |
GCATCGTGAAGTGGCGAGTT+TGG | + | chr8.3:68368490-68368509 | None:intergenic | 55.0% | |
GGAACATGGTCAAGAGTCGG+AGG | + | chr8.3:68367189-68367208 | None:intergenic | 55.0% | |
GTGAAGTGGCGAGTTTGGGA+TGG | + | chr8.3:68368485-68368504 | None:intergenic | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.3 | gene | 68367171 | 68369337 | 68367171 | ID=MS.gene050979 |
chr8.3 | mRNA | 68367171 | 68369337 | 68367171 | ID=MS.gene050979.t1;Parent=MS.gene050979 |
chr8.3 | exon | 68369191 | 68369337 | 68369191 | ID=MS.gene050979.t1.exon1;Parent=MS.gene050979.t1 |
chr8.3 | CDS | 68369191 | 68369337 | 68369191 | ID=cds.MS.gene050979.t1;Parent=MS.gene050979.t1 |
chr8.3 | exon | 68368812 | 68369015 | 68368812 | ID=MS.gene050979.t1.exon2;Parent=MS.gene050979.t1 |
chr8.3 | CDS | 68368812 | 68369015 | 68368812 | ID=cds.MS.gene050979.t1;Parent=MS.gene050979.t1 |
chr8.3 | exon | 68368231 | 68368377 | 68368231 | ID=MS.gene050979.t1.exon3;Parent=MS.gene050979.t1 |
chr8.3 | CDS | 68368231 | 68368377 | 68368231 | ID=cds.MS.gene050979.t1;Parent=MS.gene050979.t1 |
chr8.3 | exon | 68367818 | 68368123 | 68367818 | ID=MS.gene050979.t1.exon4;Parent=MS.gene050979.t1 |
chr8.3 | CDS | 68367818 | 68368123 | 68367818 | ID=cds.MS.gene050979.t1;Parent=MS.gene050979.t1 |
chr8.3 | exon | 68367171 | 68367515 | 68367171 | ID=MS.gene050979.t1.exon5;Parent=MS.gene050979.t1 |
chr8.3 | CDS | 68367171 | 68367515 | 68367171 | ID=cds.MS.gene050979.t1;Parent=MS.gene050979.t1 |
Gene Sequence |
Protein sequence |