AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene050980

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene050980.t1 MTR_8g023840 81.728 405 38 4 1 374 1 400 0.0 644
MS.gene050980.t1 MTR_8g023860 64.734 414 92 6 6 372 13 419 1.06e-177 500
MS.gene050980.t1 MTR_8g023930 65.314 271 79 3 5 265 24 289 1.58e-117 349
MS.gene050980.t1 MTR_8g023900 61.566 281 87 4 1 265 184 459 1.65e-114 342
MS.gene050980.t1 MTR_8g023900 64.211 190 54 4 1 181 1 185 1.94e-77 246
MS.gene050980.t1 MTR_8g023880 42.199 282 121 10 2 265 4 261 5.88e-56 184
MS.gene050980.t1 MTR_3g093040 51.705 176 69 6 4 174 107 271 7.95e-52 175
MS.gene050980.t1 MTR_5g069030 53.374 163 64 4 3 160 23 178 5.77e-49 174
MS.gene050980.t1 MTR_3g093050 52.410 166 67 5 3 163 20 178 6.61e-49 174
MS.gene050980.t1 MTR_3g093050 52.410 166 67 5 3 163 20 178 1.53e-48 173
MS.gene050980.t1 MTR_6g477900 50.314 159 67 5 4 157 5 156 4.08e-42 147
MS.gene050980.t1 MTR_2g086880 44.693 179 88 6 5 183 19 186 1.78e-40 150
MS.gene050980.t1 MTR_2g086880 44.262 183 91 6 5 187 19 190 1.85e-40 150
MS.gene050980.t1 MTR_5g014300 46.784 171 75 5 4 165 5 168 3.61e-40 145
MS.gene050980.t1 MTR_5g076850 49.375 160 69 4 4 158 5 157 5.77e-40 150
MS.gene050980.t1 MTR_2g064090 46.584 161 73 4 4 158 5 158 7.99e-40 144
MS.gene050980.t1 MTR_3g064580 44.385 187 91 5 4 184 5 184 1.33e-39 149
MS.gene050980.t1 MTR_4g098630 43.523 193 94 6 4 189 5 189 5.56e-38 139
MS.gene050980.t1 MTR_2g080010 40.741 189 82 5 5 170 15 196 1.22e-37 139
MS.gene050980.t1 MTR_1g090723 47.742 155 71 3 8 158 11 159 1.77e-37 142
MS.gene050980.t1 MTR_1g090723 47.742 155 71 3 8 158 11 159 2.78e-37 142
MS.gene050980.t1 MTR_7g085220 36.638 232 109 9 5 214 8 223 1.59e-36 135
MS.gene050980.t1 MTR_1g090723 46.835 158 69 4 8 158 11 160 1.80e-36 140
MS.gene050980.t1 MTR_3g070030 45.652 184 80 8 5 177 19 193 1.89e-36 135
MS.gene050980.t1 MTR_3g096140 44.516 155 74 5 8 157 10 157 1.01e-35 132
MS.gene050980.t1 MTR_7g005280 42.012 169 85 4 5 170 15 173 2.13e-35 130
MS.gene050980.t1 MTR_3g096140 44.516 155 74 5 8 157 10 157 5.12e-35 132
MS.gene050980.t1 MTR_4g089135 45.517 145 72 3 5 149 15 152 5.35e-35 131
MS.gene050980.t1 MTR_3g109340 46.203 158 75 5 4 158 21 171 6.83e-35 131
MS.gene050980.t1 MTR_8g063550 41.290 155 79 4 8 157 9 156 1.05e-34 130
MS.gene050980.t1 MTR_3g096920 45.732 164 71 6 5 160 7 160 1.46e-34 129
MS.gene050980.t1 MTR_2157s0010 43.787 169 73 6 5 158 8 169 2.07e-34 128
MS.gene050980.t1 MTR_8g063550 41.290 155 79 4 8 157 9 156 2.28e-34 132
MS.gene050980.t1 MTR_2g079990 31.487 343 190 12 4 318 15 340 3.20e-34 130
MS.gene050980.t1 MTR_8g467490 39.412 170 82 4 8 163 17 179 3.80e-34 130
MS.gene050980.t1 MTR_7g100990 34.615 208 117 7 5 201 11 210 7.53e-34 128
MS.gene050980.t1 MTR_3g109340 46.541 159 74 6 4 158 21 172 9.04e-34 129
MS.gene050980.t1 MTR_6g084430 43.195 169 82 6 1 164 1 160 9.35e-34 128
MS.gene050980.t1 MTR_8g094580 42.012 169 71 6 5 160 7 161 1.10e-33 126
MS.gene050980.t1 MTR_8g063550 41.290 155 79 4 8 157 9 156 1.52e-33 129
MS.gene050980.t1 MTR_3g088110 43.478 161 73 5 5 157 7 157 1.83e-33 126
MS.gene050980.t1 MTR_4g081870 43.195 169 70 6 2 157 6 161 2.39e-33 125
MS.gene050980.t1 MTR_4g108760 33.333 315 156 14 5 283 17 313 2.41e-33 127
MS.gene050980.t1 MTR_8g099750 42.500 160 73 5 5 154 14 164 2.50e-33 124
MS.gene050980.t1 MTR_0036s0150 45.806 155 74 3 8 158 8 156 3.65e-33 130
MS.gene050980.t1 MTR_3g435150 45.342 161 72 6 5 158 16 167 3.89e-33 125
MS.gene050980.t1 MTR_2g093810 41.071 168 75 5 4 158 13 169 4.25e-33 126
MS.gene050980.t1 MTR_5g012080 44.025 159 74 7 6 157 8 158 1.96e-32 125
MS.gene050980.t1 MTR_4g036030 45.223 157 73 7 6 157 8 156 3.28e-32 124
MS.gene050980.t1 MTR_1g069805 43.312 157 81 5 4 159 9 158 3.31e-32 122
MS.gene050980.t1 MTR_2g078700 49.624 133 60 3 5 137 23 148 3.43e-32 125
MS.gene050980.t1 MTR_7g011130 51.880 133 55 5 5 137 19 142 5.13e-32 124
MS.gene050980.t1 MTR_3g096920 48.201 139 62 4 5 143 7 135 6.96e-32 123
MS.gene050980.t1 MTR_1g097300 39.450 218 97 9 8 203 22 226 7.12e-32 126
MS.gene050980.t1 MTR_8g093580 40.000 155 81 4 8 157 9 156 7.91e-32 125
MS.gene050980.t1 MTR_1g008740 41.509 159 83 3 4 158 26 178 1.12e-31 123
MS.gene050980.t1 MTR_1g008740 41.509 159 83 3 4 158 12 164 1.28e-31 122
MS.gene050980.t1 MTR_1g090720 44.242 165 74 4 4 157 41 198 1.32e-31 125
MS.gene050980.t1 MTR_6g011860 40.606 165 76 5 8 158 18 174 1.50e-31 123
MS.gene050980.t1 MTR_5g040420 37.870 169 85 4 8 163 17 178 1.99e-31 123
MS.gene050980.t1 MTR_8g059170 42.529 174 72 7 4 164 13 171 2.52e-31 121
MS.gene050980.t1 MTR_7g097090 43.421 152 78 5 4 154 9 153 4.58e-31 120
MS.gene050980.t1 MTR_5g041940 41.477 176 77 7 5 167 3 165 4.60e-31 119
MS.gene050980.t1 MTR_4g035590 43.871 155 77 5 6 157 9 156 6.49e-31 120
MS.gene050980.t1 MTR_7g011120 51.128 133 56 5 5 137 8 131 7.28e-31 119
MS.gene050980.t1 MTR_2g068920 31.970 269 145 8 8 253 24 277 9.21e-31 119
MS.gene050980.t1 MTR_2g068880 30.935 278 154 9 8 258 25 291 1.13e-30 119
MS.gene050980.t1 MTR_7g085260 46.377 138 65 4 2 137 14 144 1.32e-30 120
MS.gene050980.t1 MTR_2g062730 36.408 206 110 8 4 195 9 207 1.75e-30 119
MS.gene050980.t1 MTR_8g076110 40.373 161 85 6 1 157 2 155 2.00e-30 118
MS.gene050980.t1 MTR_3g116070 45.000 140 69 3 5 142 23 156 2.27e-30 119
MS.gene050980.t1 MTR_2g064470 38.889 180 92 6 5 177 11 179 2.27e-30 118
MS.gene050980.t1 MTR_5g021710 42.593 162 80 7 1 157 4 157 2.96e-30 119
MS.gene050980.t1 MTR_1g096430 40.994 161 84 6 1 157 3 156 3.43e-30 118
MS.gene050980.t1 MTR_6g032770 45.113 133 66 3 5 137 18 143 3.69e-30 119
MS.gene050980.t1 MTR_6g012670 43.949 157 73 5 5 161 20 161 3.85e-30 118
MS.gene050980.t1 MTR_4g101680 42.308 156 79 6 6 157 8 156 3.93e-30 119
MS.gene050980.t1 MTR_2g079990 47.015 134 62 4 4 137 15 139 7.74e-30 118
MS.gene050980.t1 MTR_4g052620 39.024 164 85 4 1 154 1 159 1.19e-29 115
MS.gene050980.t1 MTR_4g134460 40.909 154 80 5 8 158 57 202 2.11e-29 118
MS.gene050980.t1 MTR_4g075980 39.535 172 88 6 8 170 18 182 3.86e-29 115
MS.gene050980.t1 MTR_8g024480 37.681 207 103 8 6 197 16 211 4.07e-28 114
MS.gene050980.t1 MTR_3g096140 41.549 142 71 5 21 157 2 136 9.68e-28 112
MS.gene050980.t1 MTR_3g098810 37.209 172 86 6 5 163 14 176 2.63e-27 108
MS.gene050980.t1 MTR_3g098810 42.029 138 69 5 2 137 11 139 4.22e-27 105
MS.gene050980.t1 MTR_5g090970 44.275 131 65 4 8 137 21 144 4.56e-27 109
MS.gene050980.t1 MTR_2g086690 39.375 160 81 5 6 154 5 159 1.21e-26 107
MS.gene050980.t1 MTR_5g090970 43.511 131 65 4 8 137 21 143 1.31e-26 108
MS.gene050980.t1 MTR_3g070040 42.162 185 83 9 5 177 8 180 1.54e-26 108
MS.gene050980.t1 MTR_7g105170 33.529 170 95 6 3 159 2 166 1.82e-21 92.8
MS.gene050980.t1 MTR_8g094580 40.541 111 42 4 63 160 8 107 6.16e-18 82.4
MS.gene050980.t1 MTR_8g093790 33.540 161 81 6 5 164 10 145 1.05e-17 80.5
MS.gene050980.t1 MTR_3g096400 33.333 168 84 6 2 154 4 158 1.62e-16 77.8
MS.gene050980.t1 MTR_4g094302 26.519 181 101 6 5 171 11 173 2.37e-15 74.3
MS.gene050980.t1 MTR_7g083330 29.825 171 108 5 5 172 18 179 5.18e-15 73.2
MS.gene050980.t1 MTR_4g094302 30.882 136 73 5 5 137 11 128 1.77e-14 70.9
MS.gene050980.t1 MTR_7g070140 36.364 88 51 2 51 137 6 89 2.52e-12 64.3
MS.gene050980.t1 MTR_1g087190 56.522 46 20 0 8 53 8 53 8.17e-11 57.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene050980.t1 AT4G35580 54.268 164 63 4 4 162 8 164 6.27e-53 184
MS.gene050980.t1 AT4G35580 54.268 164 63 4 4 162 8 164 6.45e-53 184
MS.gene050980.t1 AT4G35580 54.268 164 63 4 4 162 8 164 8.14e-53 183
MS.gene050980.t1 AT3G49530 50.000 168 73 4 3 165 11 172 3.02e-49 171
MS.gene050980.t1 AT3G49530 50.000 168 73 4 3 165 11 172 1.57e-48 171
MS.gene050980.t1 AT1G33060 52.201 159 64 4 4 157 23 174 2.92e-48 173
MS.gene050980.t1 AT1G33060 52.201 159 64 4 4 157 23 174 3.09e-48 173
MS.gene050980.t1 AT4G01550 42.534 221 114 6 7 226 6 214 3.56e-48 169
MS.gene050980.t1 AT5G24590 50.311 161 69 4 4 159 12 166 3.26e-47 167
MS.gene050980.t1 AT4G17980 45.455 165 78 3 2 159 3 162 9.62e-43 150
MS.gene050980.t1 AT3G17730 46.512 172 80 4 4 170 5 169 1.74e-42 149
MS.gene050980.t1 AT4G17980 45.455 165 78 3 2 159 3 162 3.12e-42 149
MS.gene050980.t1 AT5G17260 48.521 169 68 5 4 163 5 163 7.72e-42 153
MS.gene050980.t1 AT4G01520 37.273 220 116 7 6 207 5 220 1.67e-41 148
MS.gene050980.t1 AT3G03200 47.929 169 69 5 4 163 5 163 2.29e-40 149
MS.gene050980.t1 AT4G01540 37.443 219 115 7 7 207 6 220 3.45e-40 146
MS.gene050980.t1 AT4G01540 37.443 219 115 7 7 207 6 220 6.41e-40 146
MS.gene050980.t1 AT4G01540 37.443 219 115 7 7 207 6 220 1.06e-39 146
MS.gene050980.t1 AT4G01540 37.443 219 115 7 7 207 6 220 1.50e-39 146
MS.gene050980.t1 AT1G65910 48.521 169 73 5 4 165 5 166 5.09e-39 147
MS.gene050980.t1 AT5G46590 44.444 171 83 4 5 169 6 170 8.90e-39 140
MS.gene050980.t1 AT3G10480 45.000 160 75 4 4 157 26 178 1.59e-37 140
MS.gene050980.t1 AT5G09330 48.387 155 68 4 8 157 9 156 2.15e-37 141
MS.gene050980.t1 AT5G09330 48.387 155 68 4 8 157 9 156 2.15e-37 141
MS.gene050980.t1 AT5G09330 48.387 155 68 4 8 157 9 156 2.15e-37 141
MS.gene050980.t1 AT5G09330 48.387 155 68 4 8 157 9 156 2.15e-37 141
MS.gene050980.t1 AT5G09330 48.387 155 68 4 8 157 9 156 2.15e-37 141
MS.gene050980.t1 AT3G10490 43.558 163 79 4 1 157 23 178 2.20e-37 135
MS.gene050980.t1 AT3G10480 44.654 159 76 4 4 157 26 177 7.26e-37 139
MS.gene050980.t1 AT1G02230 43.671 158 79 4 6 160 4 154 1.27e-36 136
MS.gene050980.t1 AT3G10490 43.558 163 79 4 1 157 23 178 1.97e-36 137
MS.gene050980.t1 AT5G39610 46.250 160 70 6 5 157 20 170 6.87e-36 132
MS.gene050980.t1 AT1G54330 48.077 156 72 4 4 157 5 153 8.41e-36 132
MS.gene050980.t1 AT3G04070 42.941 170 75 5 4 158 9 171 9.14e-36 134
MS.gene050980.t1 AT5G46590 47.887 142 68 3 5 146 6 141 1.26e-35 132
MS.gene050980.t1 AT2G27300 40.323 186 97 7 5 187 15 189 3.06e-35 132
MS.gene050980.t1 AT3G15500 44.444 171 70 7 4 162 13 170 5.05e-35 131
MS.gene050980.t1 AT1G01720 43.210 162 73 5 5 157 7 158 5.79e-35 130
MS.gene050980.t1 AT3G15510 40.659 182 83 5 9 172 21 195 9.93e-35 131
MS.gene050980.t1 AT5G08790 43.558 163 72 6 5 157 7 159 1.18e-34 129
MS.gene050980.t1 AT5G64060 45.732 164 70 6 2 157 4 156 1.47e-34 130
MS.gene050980.t1 AT3G44290 44.025 159 78 6 1 159 11 158 2.06e-34 127
MS.gene050980.t1 AT3G04070 48.175 137 61 4 4 137 9 138 3.06e-34 130
MS.gene050980.t1 AT3G29035 50.000 138 50 6 5 137 24 147 3.08e-34 129
MS.gene050980.t1 AT5G04410 46.250 160 74 4 4 158 8 160 3.33e-34 133
MS.gene050980.t1 AT1G12260 44.785 163 74 8 3 157 2 156 3.58e-34 129
MS.gene050980.t1 AT1G32510 43.860 171 79 5 1 159 1 166 4.02e-34 127
MS.gene050980.t1 AT1G52890 42.135 178 81 6 4 172 13 177 4.07e-34 129
MS.gene050980.t1 AT5G61430 44.720 161 73 7 5 158 16 167 5.37e-34 129
MS.gene050980.t1 AT3G18400 43.452 168 80 6 1 162 1 159 5.60e-34 128
MS.gene050980.t1 AT5G39820 44.681 141 71 3 8 148 23 156 5.89e-34 129
MS.gene050980.t1 AT3G10500 47.500 160 72 5 4 158 8 160 6.56e-34 132
MS.gene050980.t1 AT5G66300 45.283 159 75 6 4 157 11 162 9.08e-34 127
MS.gene050980.t1 AT1G12260 44.785 163 74 8 3 157 2 156 1.01e-33 129
MS.gene050980.t1 AT3G04060 44.375 160 74 6 5 157 20 171 1.66e-33 127
MS.gene050980.t1 AT1G02250 42.138 159 82 4 6 161 4 155 1.96e-33 128
MS.gene050980.t1 AT4G27410 42.945 163 71 6 4 157 13 162 2.34e-33 126
MS.gene050980.t1 AT3G44290 44.025 159 78 6 1 159 11 158 3.38e-33 126
MS.gene050980.t1 AT1G69490 43.293 164 75 7 3 157 7 161 3.92e-33 125
MS.gene050980.t1 AT2G24430 43.125 160 80 4 4 159 15 167 4.18e-33 126
MS.gene050980.t1 AT2G24430 43.125 160 80 4 4 159 15 167 4.18e-33 126
MS.gene050980.t1 AT1G26870 37.073 205 94 6 8 184 19 216 5.27e-33 127
MS.gene050980.t1 AT1G62700 40.741 189 95 8 3 184 2 180 8.50e-33 127
MS.gene050980.t1 AT1G62700 40.741 189 95 8 3 184 2 180 8.50e-33 127
MS.gene050980.t1 AT5G22290 43.312 157 75 7 5 159 22 166 1.31e-32 125
MS.gene050980.t1 AT1G71930 43.478 161 80 6 1 157 5 158 1.61e-32 124
MS.gene050980.t1 AT1G71930 43.478 161 80 6 1 157 5 158 1.61e-32 124
MS.gene050980.t1 AT5G53950 50.376 133 59 3 5 137 17 142 1.95e-32 125
MS.gene050980.t1 AT2G17040 42.169 166 82 5 8 166 9 167 2.05e-32 123
MS.gene050980.t1 AT1G77450 42.236 161 75 5 5 157 10 160 2.28e-32 122
MS.gene050980.t1 AT1G61110 40.704 199 101 7 5 201 16 199 2.50e-32 124
MS.gene050980.t1 AT5G07680 43.125 160 75 6 5 157 3 153 3.44e-32 123
MS.gene050980.t1 AT5G07680 43.125 160 75 6 5 157 17 167 3.71e-32 124
MS.gene050980.t1 AT1G76420 40.506 158 83 4 4 157 21 171 4.13e-32 124
MS.gene050980.t1 AT5G63790 37.755 196 95 6 4 182 49 234 6.31e-32 122
MS.gene050980.t1 AT5G63790 37.755 196 95 6 4 182 59 244 6.35e-32 123
MS.gene050980.t1 AT3G12910 39.412 170 77 5 8 158 24 186 1.34e-31 121
MS.gene050980.t1 AT1G34190 44.654 159 70 5 8 158 19 167 2.65e-31 125
MS.gene050980.t1 AT5G04395 41.935 155 73 5 3 145 26 175 2.73e-31 117
MS.gene050980.t1 AT2G43000 42.038 157 76 6 8 158 21 168 3.68e-31 119
MS.gene050980.t1 AT3G15170 48.485 132 61 3 6 137 21 145 4.62e-31 120
MS.gene050980.t1 AT5G18270 48.120 133 61 4 5 137 21 145 6.83e-31 120
MS.gene050980.t1 AT3G10480 37.824 193 74 6 4 157 26 211 1.05e-30 123
MS.gene050980.t1 AT2G33480 44.304 158 69 6 5 157 15 158 1.12e-30 118
MS.gene050980.t1 AT2G33480 43.038 158 73 5 5 157 15 160 1.42e-30 118
MS.gene050980.t1 AT4G27410 39.888 178 72 7 4 157 13 179 1.65e-30 119
MS.gene050980.t1 AT5G18270 47.368 133 62 4 5 137 21 145 1.76e-30 119
MS.gene050980.t1 AT5G13180 40.127 157 80 4 5 157 14 160 1.82e-30 117
MS.gene050980.t1 AT1G34180 50.000 130 58 4 8 137 19 141 3.62e-30 120
MS.gene050980.t1 AT1G01010 42.500 160 79 4 7 159 5 158 3.96e-30 120
MS.gene050980.t1 AT5G62380 43.038 158 77 7 5 157 7 156 4.39e-30 118
MS.gene050980.t1 AT5G62380 43.038 158 77 7 5 157 7 156 4.39e-30 118
MS.gene050980.t1 AT2G02450 41.830 153 78 5 8 157 54 198 5.50e-30 119
MS.gene050980.t1 AT1G33280 42.581 155 79 5 6 157 9 156 6.15e-30 117
MS.gene050980.t1 AT1G34180 50.000 130 58 4 8 137 19 141 6.50e-30 121
MS.gene050980.t1 AT2G18060 42.767 159 78 7 4 157 8 158 7.36e-30 118
MS.gene050980.t1 AT2G18060 42.767 159 78 7 4 157 8 158 7.36e-30 118
MS.gene050980.t1 AT4G10350 43.396 159 76 6 6 157 10 161 8.30e-30 117
MS.gene050980.t1 AT2G02450 41.830 153 78 5 8 157 54 198 8.31e-30 119
MS.gene050980.t1 AT4G36160 42.138 159 79 7 4 157 9 159 2.09e-29 117
MS.gene050980.t1 AT4G36160 42.138 159 79 7 4 157 9 159 2.09e-29 117
MS.gene050980.t1 AT4G36160 42.138 159 79 7 4 157 13 163 2.22e-29 117
MS.gene050980.t1 AT1G02220 41.722 151 78 3 6 155 4 145 5.69e-29 116
MS.gene050980.t1 AT1G56010 36.571 175 88 5 5 171 19 178 2.11e-28 113
MS.gene050980.t1 AT1G79580 41.250 160 79 6 4 157 16 166 6.72e-28 113
MS.gene050980.t1 AT1G79580 41.250 160 79 6 4 157 16 166 6.72e-28 113
MS.gene050980.t1 AT1G79580 41.250 160 79 6 4 157 16 166 6.72e-28 113
MS.gene050980.t1 AT1G79580 41.250 160 79 6 4 157 16 166 6.72e-28 113
MS.gene050980.t1 AT1G79580 41.250 160 79 6 4 157 16 166 6.72e-28 113
MS.gene050980.t1 AT3G04420 39.355 155 87 4 6 159 4 152 1.15e-27 112
MS.gene050980.t1 AT3G04420 39.355 155 87 4 6 159 4 152 1.43e-27 110
MS.gene050980.t1 AT1G52880 43.103 174 67 7 9 162 21 182 2.69e-27 110
MS.gene050980.t1 AT1G34180 45.775 142 58 5 8 137 19 153 5.94e-27 111
MS.gene050980.t1 AT4G28530 37.356 174 87 5 1 158 6 173 6.73e-27 110
MS.gene050980.t1 AT1G34180 45.775 142 58 5 8 137 19 153 9.05e-27 112
MS.gene050980.t1 AT5G22380 37.805 164 87 5 1 154 1 159 1.12e-26 106
MS.gene050980.t1 AT3G12977 35.638 188 98 7 5 182 18 192 2.44e-26 107
MS.gene050980.t1 AT2G46770 37.143 175 78 6 5 157 16 180 3.46e-26 108
MS.gene050980.t1 AT3G61910 33.962 212 107 8 5 197 11 208 4.07e-26 107
MS.gene050980.t1 AT1G32770 35.000 200 95 8 6 179 17 207 3.71e-25 105
MS.gene050980.t1 AT3G44350 34.940 166 95 4 1 158 1 161 4.88e-24 99.8
MS.gene050980.t1 AT1G32870 43.671 158 73 7 8 158 13 161 1.34e-23 102
MS.gene050980.t1 AT1G32870 43.671 158 73 7 8 158 13 161 1.43e-23 102
MS.gene050980.t1 AT1G32870 43.671 158 73 7 8 158 49 197 1.89e-23 102
MS.gene050980.t1 AT3G44350 37.324 142 82 3 1 140 1 137 3.36e-23 95.1
MS.gene050980.t1 AT3G04430 41.912 136 68 5 11 139 6 137 4.27e-21 90.5
MS.gene050980.t1 AT4G28530 41.593 113 49 2 1 98 6 116 1.11e-18 86.3
MS.gene050980.t1 AT5G61430 41.818 110 51 5 56 158 1 104 1.97e-17 82.0
MS.gene050980.t1 AT3G56530 35.897 156 87 7 4 154 51 198 8.28e-17 80.9
MS.gene050980.t1 AT5G64530 33.824 136 65 5 5 137 3 116 9.30e-17 77.4
MS.gene050980.t1 AT5G64530 33.577 137 66 5 4 137 2 116 1.63e-16 77.4
MS.gene050980.t1 AT3G12977 35.938 128 66 4 63 182 20 139 1.36e-15 75.9
MS.gene050980.t1 AT4G10350 40.000 110 54 4 54 157 11 114 4.53e-15 75.5
MS.gene050980.t1 AT1G56010 35.897 117 54 4 63 171 8 111 1.58e-14 73.2
MS.gene050980.t1 AT2G33480 40.196 102 50 3 61 157 8 103 3.94e-14 71.2
MS.gene050980.t1 AT5G14000 29.323 133 85 4 5 137 15 138 1.04e-12 65.9
MS.gene050980.t1 AT5G14000 29.323 133 85 4 5 137 15 138 2.12e-12 66.2
MS.gene050980.t1 AT5G14490 28.061 196 116 7 4 182 54 241 2.75e-12 67.8
MS.gene050980.t1 AT5G14490 28.272 191 112 7 4 177 57 239 2.98e-12 67.8
MS.gene050980.t1 AT5G14490 28.272 191 112 7 4 177 57 239 4.76e-12 67.0
MS.gene050980.t1 AT5G14490 28.061 196 116 7 4 182 54 241 5.72e-12 66.2

Find 63 sgRNAs with CRISPR-Local

Find 154 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATCATTTCGAGATGATTTC+GGG 0.227385 8.3:-68373977 MS.gene050980:CDS
GAATATGGAACCAATGTTTC+AGG 0.255948 8.3:-68374503 MS.gene050980:CDS
ACAAATACGCAAATAGTAAA+AGG 0.269504 8.3:-68375740 MS.gene050980:CDS
GCATCATTTCGAGATGATTT+CGG 0.275502 8.3:-68373978 MS.gene050980:CDS
AGAGGTACAAACAATGTTAT+TGG 0.278639 8.3:-68375654 MS.gene050980:CDS
TGGTCTTGACCGTAAGATTA+AGG 0.284539 8.3:-68375679 MS.gene050980:CDS
TTTACAGTGTGGCAATGTTC+TGG 0.292487 8.3:-68374048 MS.gene050980:intron
TTTCTTGAACATCCTAGTTC+AGG 0.346685 8.3:-68374011 MS.gene050980:CDS
GTTCGAACCTTGGGACTTAC+CGG 0.351183 8.3:-68375896 MS.gene050980:CDS
GAGGTACAAACAATGTTATT+GGG 0.353644 8.3:-68375653 MS.gene050980:CDS
AAAACACTTGTGTACTATAA+TGG 0.357000 8.3:-68375624 MS.gene050980:CDS
GACATGAAGGTGGCTGGTCT+TGG 0.374690 8.3:+68373840 None:intergenic
CATATCGATGTGTCCACTTT+CGG 0.387067 8.3:+68374378 None:intergenic
TGACTATGGTTAAAAGCAAC+TGG 0.394399 8.3:-68374890 MS.gene050980:CDS
AACTACGAATTATGTGACTA+TGG 0.418513 8.3:-68374904 MS.gene050980:CDS
TGGCTGGTCTTGGATGATAC+TGG 0.427061 8.3:+68373850 None:intergenic
GAAGGACAGAGTGTGGATAC+TGG 0.428296 8.3:-68375710 MS.gene050980:CDS
TACCTCTAACCTTAATCTTA+CGG 0.431946 8.3:+68375670 None:intergenic
TCGTTGAGAATGATCTACTA+TGG 0.438845 8.3:-68374231 MS.gene050980:CDS
TGTTTGCAAGTTCGAACCTT+GGG 0.438935 8.3:-68375905 MS.gene050980:CDS
TGATGAGGTTCCTGAAACAT+TGG 0.440724 8.3:+68374493 None:intergenic
GACCGTAAGATTAAGGTTAG+AGG 0.442904 8.3:-68375672 MS.gene050980:CDS
CAAGCTCTTCATCTGTTGGT+TGG 0.449162 8.3:+68375998 None:intergenic
AATGTTTCAGGAACCTCATC+AGG 0.458637 8.3:-68374491 MS.gene050980:CDS
TTGCTTCTTCTTAGAGTGGA+AGG 0.462185 8.3:+68373876 None:intergenic
TCGGAACTCATGTGTTTACT+TGG 0.464802 8.3:+68374649 None:intergenic
TTTACAAGCTCTTCATCTGT+TGG 0.472698 8.3:+68375994 None:intergenic
TCCTCGTCAATAGTTTCAAA+CGG 0.474217 8.3:+68374349 None:intergenic
GAAAATCAAGAAGCAGTTGA+AGG 0.489171 8.3:-68374622 MS.gene050980:CDS
GGTTGGAATCTGAATCCAAC+AGG 0.493475 8.3:+68376015 None:intergenic
TTCAATCTCTGAAAATGAGA+TGG 0.499943 8.3:-68374434 MS.gene050980:CDS
ATGACAAACTCATTTCCTGT+TGG 0.502565 8.3:-68376030 MS.gene050980:CDS
GCATAGTATTCTCCTGAACT+AGG 0.503449 8.3:+68373999 None:intergenic
GAAGACTGGTATGTTGAGAA+AGG 0.511939 8.3:+68374454 None:intergenic
AGCTATAAAATTGTTGACAA+TGG 0.512549 8.3:+68375936 None:intergenic
GATAGAATGATATGTGATGA+AGG 0.532647 8.3:-68374676 MS.gene050980:CDS
GAAGTATCTTTATCGAACTC+AGG 0.533769 8.3:-68374412 MS.gene050980:CDS
TAGAATGATATGTGATGAAG+GGG 0.540119 8.3:-68374674 MS.gene050980:CDS
TTCGAACCTTGGGACTTACC+GGG 0.549304 8.3:-68375895 MS.gene050980:intron
CTCGACTGCAAATAAACCTC+GGG 0.549433 8.3:-68373931 MS.gene050980:CDS
TAAAATCCAATGATCCAGAA+TGG 0.550077 8.3:-68375785 MS.gene050980:CDS
ATAGAATGATATGTGATGAA+GGG 0.555622 8.3:-68374675 MS.gene050980:CDS
ACAAACCTGGTTATCATCAA+AGG 0.564326 8.3:+68374842 None:intergenic
TACCACCTTTGATGATAACC+AGG 0.567592 8.3:-68374847 MS.gene050980:intron
ATCAATTCGATGTTAAATGA+CGG 0.567730 8.3:-68374316 MS.gene050980:CDS
ATGTTTGCAAGTTCGAACCT+TGG 0.568862 8.3:-68375906 MS.gene050980:CDS
ATAGTAAAAGGTTTAACAGA+AGG 0.579914 8.3:-68375728 MS.gene050980:CDS
TGTGGATACTGGAAAGCCAC+TGG 0.585586 8.3:-68375699 MS.gene050980:CDS
ATTTGCAGTCGAGTCACAAG+AGG 0.587545 8.3:+68373941 None:intergenic
CAATGTTCTGGATACTTCAA+CGG 0.597908 8.3:-68374036 MS.gene050980:CDS
TTTAACAGAAGGACAGAGTG+TGG 0.612656 8.3:-68375717 MS.gene050980:CDS
ACTCGACTGCAAATAAACCT+CGG 0.624687 8.3:-68373932 MS.gene050980:CDS
AATCTTACGGTCAAGACCAG+TGG 0.626820 8.3:+68375683 None:intergenic
TCCGTTTGAAACTATTGACG+AGG 0.648885 8.3:-68374350 MS.gene050980:CDS
ATCATTTCGAGATGATTTCG+GGG 0.650121 8.3:-68373976 MS.gene050980:CDS
TTTGCGTATTTGTAATCGCG+AGG 0.654879 8.3:+68375750 None:intergenic
AACCTGGTTATCATCAAAGG+TGG 0.663139 8.3:+68374845 None:intergenic
GAATGATATGTGATGAAGGG+GGG 0.665909 8.3:-68374672 MS.gene050980:CDS
TCATTTCGAGATGATTTCGG+GGG 0.671935 8.3:-68373975 MS.gene050980:CDS
GTAGATCATTCTCAACGACT+CGG 0.673640 8.3:+68374236 None:intergenic
ACACAATTGATCATCTCCCG+AGG 0.677154 8.3:+68373915 None:intergenic
GACTATGGTTAAAAGCAACT+GGG 0.696400 8.3:-68374889 MS.gene050980:CDS
AGAATGATATGTGATGAAGG+GGG 0.758539 8.3:-68374673 MS.gene050980:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGTATTAAAGAAAATATTTA+CGG + chr8.3:68375666-68375685 None:intergenic 10.0%
!!! AGTGAAATTTTAATTTTTTT+TGG + chr8.3:68374618-68374637 None:intergenic 10.0%
!!! TTTTGCTAAATAATTTTTTT+TGG - chr8.3:68374672-68374691 MS.gene050980:CDS 10.0%
!! AGAATGTTAATAATTCATTA+TGG + chr8.3:68374555-68374574 None:intergenic 15.0%
!! GAATGTTAATAATTCATTAT+GGG + chr8.3:68374554-68374573 None:intergenic 15.0%
!! GTATTAAAGAAAATATTTAC+GGG + chr8.3:68375665-68375684 None:intergenic 15.0%
!!! TTTTATGAGAAAATAATGAT+GGG + chr8.3:68373984-68374003 None:intergenic 15.0%
!!! TTTTTATGAGAAAATAATGA+TGG + chr8.3:68373985-68374004 None:intergenic 15.0%
!! TATCTCAAAAACAAGTTATT+TGG - chr8.3:68373869-68373888 MS.gene050980:CDS 20.0%
!! TTTATGAGAAAATAATGATG+GGG + chr8.3:68373983-68374002 None:intergenic 20.0%
!! TTTGCAAAAAAAAAACATAC+TGG - chr8.3:68374310-68374329 MS.gene050980:CDS 20.0%
!!! TTTTTTTGCAAATTTTTTGC+CGG + chr8.3:68374302-68374321 None:intergenic 20.0%
! AAAACACTTGTGTACTATAA+TGG - chr8.3:68374212-68374231 MS.gene050980:CDS 25.0%
! ACAAATACGCAAATAGTAAA+AGG - chr8.3:68374096-68374115 MS.gene050980:intron 25.0%
! AGACTTTGTTCTCAAAATTT+CGG + chr8.3:68375279-68375298 None:intergenic 25.0%
! AGCTATAAAATTGTTGACAA+TGG + chr8.3:68373903-68373922 None:intergenic 25.0%
! ATAGAATGATATGTGATGAA+GGG - chr8.3:68375161-68375180 MS.gene050980:intron 25.0%
! ATAGTAAAAGGTTTAACAGA+AGG - chr8.3:68374108-68374127 MS.gene050980:intron 25.0%
! ATCAATTCGATGTTAAATGA+CGG - chr8.3:68375520-68375539 MS.gene050980:intron 25.0%
! GTCTTCATAAAATAAAACCT+GGG + chr8.3:68374340-68374359 None:intergenic 25.0%
!! AAATAATGATGGGGTTTATT+TGG + chr8.3:68373974-68373993 None:intergenic 25.0%
!! TAACATTCTGAGCAATATTT+TGG - chr8.3:68374566-68374585 MS.gene050980:intron 25.0%
!!! ATAACTTGTTTTTGAGATAG+TGG + chr8.3:68373868-68373887 None:intergenic 25.0%
!!! GAGTATGATATGAGTTTTTT+CGG - chr8.3:68375044-68375063 MS.gene050980:intron 25.0%
!!! TCTTCTAAAATTTTACAGTG+TGG - chr8.3:68375777-68375796 MS.gene050980:CDS 25.0%
AACTACGAATTATGTGACTA+TGG - chr8.3:68374932-68374951 MS.gene050980:intron 30.0%
AAGCATGTTTCATGTAAGAA+AGG + chr8.3:68375312-68375331 None:intergenic 30.0%
ATAGTCACATAATTCGTTGA+CGG - chr8.3:68374248-68374267 MS.gene050980:intron 30.0%
CATGAAACATGCTTAGAATA+TGG - chr8.3:68375318-68375337 MS.gene050980:intron 30.0%
CATTCTAGTAGCATTTCAAA+AGG + chr8.3:68375737-68375756 None:intergenic 30.0%
CGTCTTCATAAAATAAAACC+TGG + chr8.3:68374341-68374360 None:intergenic 30.0%
GAGGTACAAACAATGTTATT+GGG - chr8.3:68374183-68374202 MS.gene050980:intron 30.0%
GATAGAATGATATGTGATGA+AGG - chr8.3:68375160-68375179 MS.gene050980:intron 30.0%
TAAAATCCAATGATCCAGAA+TGG - chr8.3:68374051-68374070 MS.gene050980:intron 30.0%
TACCTCTAACCTTAATCTTA+CGG + chr8.3:68374169-68374188 None:intergenic 30.0%
TAGAATGATATGTGATGAAG+GGG - chr8.3:68375162-68375181 MS.gene050980:intron 30.0%
TAGATCTAAATCTCAAGTGA+TGG - chr8.3:68374372-68374391 MS.gene050980:CDS 30.0%
TTGAAGGAATTCTTGATGTA+AGG - chr8.3:68375230-68375249 MS.gene050980:intron 30.0%
TTGTTGTAACAAAACAAACC+TGG + chr8.3:68375010-68375029 None:intergenic 30.0%
! AAAAGAAGACACACTTTTGT+CGG - chr8.3:68375562-68375581 MS.gene050980:intron 30.0%
! AAAAGTCCTCTACGAAATTT+TGG + chr8.3:68375089-68375108 None:intergenic 30.0%
! AGAGGTACAAACAATGTTAT+TGG - chr8.3:68374182-68374201 MS.gene050980:intron 30.0%
! GTTAGAGTTTAGAGGTTTTT+GGG - chr8.3:68374394-68374413 MS.gene050980:CDS 30.0%
! TTCAATCTCTGAAAATGAGA+TGG - chr8.3:68375402-68375421 MS.gene050980:intron 30.0%
!! ATGGGTTGAAGAAATTTTAC+AGG - chr8.3:68374429-68374448 MS.gene050980:CDS 30.0%
!! GTTTTATTCATACTGTGATG+TGG - chr8.3:68375698-68375717 MS.gene050980:CDS 30.0%
!!! CTTTTGAAATGCTACTAGAA+TGG - chr8.3:68375735-68375754 MS.gene050980:CDS 30.0%
!!! GGTTTATTTGGTTTTTTACC+CGG + chr8.3:68373962-68373981 None:intergenic 30.0%
!!! TGAGAAAGGAAAGTACTTTT+CGG + chr8.3:68375371-68375390 None:intergenic 30.0%
!!! TGCTGGACATTTTTTACATT+GGG - chr8.3:68374513-68374532 MS.gene050980:intron 30.0%
!!! TTGCTGGACATTTTTTACAT+TGG - chr8.3:68374512-68374531 MS.gene050980:intron 30.0%
AAAAACATACTGGTAAACCC+AGG - chr8.3:68374320-68374339 MS.gene050980:CDS 35.0%
AAGTGATGGTTAGAGTTTAG+AGG - chr8.3:68374386-68374405 MS.gene050980:CDS 35.0%
ACAAACCTGGTTATCATCAA+AGG + chr8.3:68374997-68375016 None:intergenic 35.0%
ACATAATTCGTAGTTCGCTT+CGG + chr8.3:68374927-68374946 None:intergenic 35.0%
AGAATGATATGTGATGAAGG+GGG - chr8.3:68375163-68375182 MS.gene050980:intron 35.0%
AGGAGGAAGATGTTGATATT+AGG - chr8.3:68374481-68374500 MS.gene050980:CDS 35.0%
ATCATTTCGAGATGATTTCG+GGG - chr8.3:68375860-68375879 MS.gene050980:intron 35.0%
ATGACAAACTCATTTCCTGT+TGG - chr8.3:68373806-68373825 MS.gene050980:CDS 35.0%
CATCATTTCGAGATGATTTC+GGG - chr8.3:68375859-68375878 MS.gene050980:intron 35.0%
GAAAAACCATTCTGGATCAT+TGG + chr8.3:68374060-68374079 None:intergenic 35.0%
GAAAATCAAGAAGCAGTTGA+AGG - chr8.3:68375214-68375233 MS.gene050980:intron 35.0%
GAATATGGAACCAATGTTTC+AGG - chr8.3:68375333-68375352 MS.gene050980:intron 35.0%
GACTATGGTTAAAAGCAACT+GGG - chr8.3:68374947-68374966 MS.gene050980:intron 35.0%
GCATCATTTCGAGATGATTT+CGG - chr8.3:68375858-68375877 MS.gene050980:intron 35.0%
GGACAAAAGAAAAACCATTC+TGG + chr8.3:68374068-68374087 None:intergenic 35.0%
GGAGGAAGATGTTGATATTA+GGG - chr8.3:68374482-68374501 MS.gene050980:CDS 35.0%
TATCCTCCAAAATTTCGTAG+AGG - chr8.3:68375080-68375099 MS.gene050980:intron 35.0%
TCCTCGTCAATAGTTTCAAA+CGG + chr8.3:68375490-68375509 None:intergenic 35.0%
TCGTTGAGAATGATCTACTA+TGG - chr8.3:68375605-68375624 MS.gene050980:intron 35.0%
TGACTATGGTTAAAAGCAAC+TGG - chr8.3:68374946-68374965 MS.gene050980:intron 35.0%
TGTAAAAAATGTCCAGCAAC+TGG + chr8.3:68374511-68374530 None:intergenic 35.0%
TTTACAAGCTCTTCATCTGT+TGG + chr8.3:68373845-68373864 None:intergenic 35.0%
TTTCTTGAACATCCTAGTTC+AGG - chr8.3:68375825-68375844 MS.gene050980:intron 35.0%
! CAATGTTCTGGATACTTCAA+CGG - chr8.3:68375800-68375819 MS.gene050980:CDS 35.0%
! CATTTTCAGAGATTGAAGAC+TGG + chr8.3:68375399-68375418 None:intergenic 35.0%
! GAAGTATCTTTATCGAACTC+AGG - chr8.3:68375424-68375443 MS.gene050980:intron 35.0%
! GGATTTTATGATTCCGAAAG+TGG - chr8.3:68375445-68375464 MS.gene050980:intron 35.0%
! GGTTAGAGTTTAGAGGTTTT+TGG - chr8.3:68374393-68374412 MS.gene050980:CDS 35.0%
! GGTTGAAGAAATTTTACAGG+AGG - chr8.3:68374432-68374451 MS.gene050980:CDS 35.0%
! GTTTTTGCTTCTTCTTAGAG+TGG + chr8.3:68375967-68375986 None:intergenic 35.0%
! TGAAGAAATTTTACAGGAGG+AGG - chr8.3:68374435-68374454 MS.gene050980:CDS 35.0%
!! TTTGGGAAAGTGCTGAAAAT+GGG - chr8.3:68374411-68374430 MS.gene050980:CDS 35.0%
!!! ACATTTTTTACATTGGGCCT+GGG - chr8.3:68374519-68374538 MS.gene050980:intron 35.0%
!!! TTCCTCTTCAGCTTTTTTCT+CGG + chr8.3:68375137-68375156 None:intergenic 35.0%
!!! TTTTGGGAAAGTGCTGAAAA+TGG - chr8.3:68374410-68374429 MS.gene050980:CDS 35.0%
AACCTGGTTATCATCAAAGG+TGG + chr8.3:68374994-68375013 None:intergenic 40.0%
AATGTTTCAGGAACCTCATC+AGG - chr8.3:68375345-68375364 MS.gene050980:intron 40.0%
ACTCGACTGCAAATAAACCT+CGG - chr8.3:68375904-68375923 MS.gene050980:CDS 40.0%
AGTACTAGTACTACGAACCA+AGG - chr8.3:68374823-68374842 MS.gene050980:intron 40.0%
ATATTAGGGTTTCCAGTTGC+TGG - chr8.3:68374496-68374515 MS.gene050980:CDS 40.0%
ATGTTTGCAAGTTCGAACCT+TGG - chr8.3:68373930-68373949 MS.gene050980:CDS 40.0%
CATATCGATGTGTCCACTTT+CGG + chr8.3:68375461-68375480 None:intergenic 40.0%
GAAGACTGGTATGTTGAGAA+AGG + chr8.3:68375385-68375404 None:intergenic 40.0%
GAATGATATGTGATGAAGGG+GGG - chr8.3:68375164-68375183 MS.gene050980:intron 40.0%
GACCGTAAGATTAAGGTTAG+AGG - chr8.3:68374164-68374183 MS.gene050980:intron 40.0%
GCATAGTATTCTCCTGAACT+AGG + chr8.3:68375840-68375859 None:intergenic 40.0%
GTAGATCATTCTCAACGACT+CGG + chr8.3:68375603-68375622 None:intergenic 40.0%
TACGCGACATGAGAAGAATT+CGG + chr8.3:68374878-68374897 None:intergenic 40.0%
TCATTTCGAGATGATTTCGG+GGG - chr8.3:68375861-68375880 MS.gene050980:intron 40.0%
TCGGAACTCATGTGTTTACT+TGG + chr8.3:68375190-68375209 None:intergenic 40.0%
TGATGAGGTTCCTGAAACAT+TGG + chr8.3:68375346-68375365 None:intergenic 40.0%
TGTTTGCAAGTTCGAACCTT+GGG - chr8.3:68373931-68373950 MS.gene050980:CDS 40.0%
TTGCTTCTTCTTAGAGTGGA+AGG + chr8.3:68375963-68375982 None:intergenic 40.0%
TTTAACAGAAGGACAGAGTG+TGG - chr8.3:68374119-68374138 MS.gene050980:intron 40.0%
TTTACAGTGTGGCAATGTTC+TGG - chr8.3:68375788-68375807 MS.gene050980:CDS 40.0%
TTTGCGTATTTGTAATCGCG+AGG + chr8.3:68374089-68374108 None:intergenic 40.0%
! AGAAATTTTACAGGAGGAGG+AGG - chr8.3:68374438-68374457 MS.gene050980:CDS 40.0%
! AGCAGCTCTTTTTGACATGA+AGG + chr8.3:68376012-68376031 None:intergenic 40.0%
! AGCTCTTTTTGACATGAAGG+TGG + chr8.3:68376009-68376028 None:intergenic 40.0%
! AGTCCTCTACGAAATTTTGG+AGG + chr8.3:68375086-68375105 None:intergenic 40.0%
! TACCACCTTTGATGATAACC+AGG - chr8.3:68374989-68375008 MS.gene050980:intron 40.0%
! TCCGTTTGAAACTATTGACG+AGG - chr8.3:68375486-68375505 MS.gene050980:intron 40.0%
! TGCTTCTTGATTTTCGCGAT+CGG + chr8.3:68375209-68375228 None:intergenic 40.0%
! TGGTCTTGACCGTAAGATTA+AGG - chr8.3:68374157-68374176 MS.gene050980:intron 40.0%
!!! AAATTTTTTGCCGGTTCCTG+TGG + chr8.3:68374293-68374312 None:intergenic 40.0%
!!! GACATTTTTTACATTGGGCC+TGG - chr8.3:68374518-68374537 MS.gene050980:intron 40.0%
AATCTTACGGTCAAGACCAG+TGG + chr8.3:68374156-68374175 None:intergenic 45.0%
ACACAATTGATCATCTCCCG+AGG + chr8.3:68375924-68375943 None:intergenic 45.0%
AGAAGAATTCGGTACGTCTG+AGG + chr8.3:68374867-68374886 None:intergenic 45.0%
AGATGATTTCGGGGGATTTG+AGG - chr8.3:68375869-68375888 MS.gene050980:intron 45.0%
AGCCGAGAAAAAAGCTGAAG+AGG - chr8.3:68375132-68375151 MS.gene050980:intron 45.0%
ATTATGGGCCAAACAAACCC+AGG + chr8.3:68374539-68374558 None:intergenic 45.0%
ATTTGCAGTCGAGTCACAAG+AGG + chr8.3:68375898-68375917 None:intergenic 45.0%
CAAGCTCTTCATCTGTTGGT+TGG + chr8.3:68373841-68373860 None:intergenic 45.0%
CTCGACTGCAAATAAACCTC+GGG - chr8.3:68375905-68375924 MS.gene050980:CDS 45.0%
CTGCTCAATTGAGTGAAAGG+AGG - chr8.3:68374464-68374483 MS.gene050980:CDS 45.0%
GAAGAATTCGGTACGTCTGA+GGG + chr8.3:68374866-68374885 None:intergenic 45.0%
GGTTGGAATCTGAATCCAAC+AGG + chr8.3:68373824-68373843 None:intergenic 45.0%
! AAGTACTTTTCGGCCTGATG+AGG + chr8.3:68375361-68375380 None:intergenic 45.0%
! AATTTTACAGGAGGAGGAGG+CGG - chr8.3:68374441-68374460 MS.gene050980:CDS 45.0%
! CTTTTTGACATGAAGGTGGC+TGG + chr8.3:68376005-68376024 None:intergenic 45.0%
! TTTTTACCCGGTAAGTCCCA+AGG + chr8.3:68373950-68373969 None:intergenic 45.0%
!! TTATTAAAAAAATTATTGAT+AGG - chr8.3:68374781-68374800 MS.gene050980:intron 5.0%
AACAAGCGTACCACAGGAAC+CGG - chr8.3:68374280-68374299 MS.gene050980:intron 50.0%
CGGCTGCTCAATTGAGTGAA+AGG - chr8.3:68374461-68374480 MS.gene050980:CDS 50.0%
GAAGGACAGAGTGTGGATAC+TGG - chr8.3:68374126-68374145 MS.gene050980:intron 50.0%
GTTCGAACCTTGGGACTTAC+CGG - chr8.3:68373940-68373959 MS.gene050980:CDS 50.0%
TATAGAGCTTCGGTACGCCT+TGG + chr8.3:68374843-68374862 None:intergenic 50.0%
TGTGGATACTGGAAAGCCAC+TGG - chr8.3:68374137-68374156 MS.gene050980:intron 50.0%
TTCGAACCTTGGGACTTACC+GGG - chr8.3:68373941-68373960 MS.gene050980:CDS 50.0%
! ACATTGGGCCTGGGTTTGTT+TGG - chr8.3:68374528-68374547 MS.gene050980:intron 50.0%
! CGTCTGAGGGTATAGAGCTT+CGG + chr8.3:68374853-68374872 None:intergenic 50.0%
! TCATTCTCAACGACTCGGAC+TGG + chr8.3:68375598-68375617 None:intergenic 50.0%
!! TGGCTGGTCTTGGATGATAC+TGG + chr8.3:68375989-68376008 None:intergenic 50.0%
CGCAGAAACAAGCGTACCAC+AGG - chr8.3:68374274-68374293 MS.gene050980:intron 55.0%
GTTCGCTTCGGTACGTGGTA+CGG + chr8.3:68374915-68374934 None:intergenic 55.0%
TCGTAGTTCGCTTCGGTACG+TGG + chr8.3:68374920-68374939 None:intergenic 55.0%
TTCGCTTCGGTACGTGGTAC+GGG + chr8.3:68374914-68374933 None:intergenic 55.0%
TTCGGTACGTGGTACGGGTT+CGG + chr8.3:68374909-68374928 None:intergenic 55.0%
!! GACATGAAGGTGGCTGGTCT+TGG + chr8.3:68375999-68376018 None:intergenic 55.0%
TCGGTACGTGGTACGGGTTC+GGG + chr8.3:68374908-68374927 None:intergenic 60.0%
! CTCAACGACTCGGACTGGAC+AGG + chr8.3:68375593-68375612 None:intergenic 60.0%
GTGGTACGGGTTCGGGTACG+CGG + chr8.3:68374901-68374920 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr8.3 gene 68373806 68376052 68373806 ID=MS.gene050980
chr8.3 mRNA 68373806 68376052 68373806 ID=MS.gene050980.t1;Parent=MS.gene050980
chr8.3 exon 68375896 68376052 68375896 ID=MS.gene050980.t1.exon1;Parent=MS.gene050980.t1
chr8.3 CDS 68375896 68376052 68375896 ID=cds.MS.gene050980.t1;Parent=MS.gene050980.t1
chr8.3 exon 68375620 68375819 68375620 ID=MS.gene050980.t1.exon2;Parent=MS.gene050980.t1
chr8.3 CDS 68375620 68375819 68375620 ID=cds.MS.gene050980.t1;Parent=MS.gene050980.t1
chr8.3 exon 68374848 68374928 68374848 ID=MS.gene050980.t1.exon3;Parent=MS.gene050980.t1
chr8.3 CDS 68374848 68374928 68374848 ID=cds.MS.gene050980.t1;Parent=MS.gene050980.t1
chr8.3 exon 68374612 68374758 68374612 ID=MS.gene050980.t1.exon4;Parent=MS.gene050980.t1
chr8.3 CDS 68374612 68374758 68374612 ID=cds.MS.gene050980.t1;Parent=MS.gene050980.t1
chr8.3 exon 68374309 68374524 68374309 ID=MS.gene050980.t1.exon5;Parent=MS.gene050980.t1
chr8.3 CDS 68374309 68374524 68374309 ID=cds.MS.gene050980.t1;Parent=MS.gene050980.t1
chr8.3 exon 68374194 68374259 68374194 ID=MS.gene050980.t1.exon6;Parent=MS.gene050980.t1
chr8.3 CDS 68374194 68374259 68374194 ID=cds.MS.gene050980.t1;Parent=MS.gene050980.t1
chr8.3 exon 68373806 68374063 68373806 ID=MS.gene050980.t1.exon7;Parent=MS.gene050980.t1
chr8.3 CDS 68373806 68374063 68373806 ID=cds.MS.gene050980.t1;Parent=MS.gene050980.t1
Gene Sequence

>MS.gene050980

ATGACAAACTCATTTCCTGTTGGATTCAGATTCCAACCAACAGATGAAGAGCTTGTAAACCACTATCTCAAAAACAAGTTATTTGGTAATGATTCCATTGTCAACAATTTTATAGCTGAAGTCGATGTTTGCAAGTTCGAACCTTGGGACTTACCGGGTAAAAAACCAAATAAACCCCATCATTATTTTCTCATAAAAATGCAATCTTTTTAATGTTTTTGATACTTTTTCAGCTTGTTCAATCATAAAATCCAATGATCCAGAATGGTTTTTCTTTTGTCCTCGCGATTACAAATACGCAAATAGTAAAAGGTTTAACAGAAGGACAGAGTGTGGATACTGGAAAGCCACTGGTCTTGACCGTAAGATTAAGGTTAGAGGTACAAACAATGTTATTGGGACAAAGAAAACACTTGTGTACTATAATGGTTGTGTTAAAAGCATAGTCACATAATTCGTTGACGGATTCGCAGAAACAAGCGTACCACAGGAACCGGCAAAAAATTTGCAAAAAAAAAACATACTGGTAAACCCAGGTTTTATTTTATGAAGACGAAGAGAAGAAATAGATCTAAATCTCAAGTGATGGTTAGAGTTTAGAGGTTTTTGGGAAAGTGCTGAAAATGGGTTGAAGAAATTTTACAGGAGGAGGAGGCGGCTGCTCAATTGAGTGAAAGGAGGAAGATGTTGATATTAGGGTTTCCAGTTGCTGGACATTTTTTACATTGGGCCTGGGTTTGTTTGGCCCATAATGAATTATTAACATTCTGAGCAATATTTTGGCACATATTTTCTACTGATTTTTCAAACCAAAAAAAATTAAAATTTCACTTTTTGAAAATAATGCAAATGTATTGATCGCAGATTTTTGCTAAATAATTTTTTTTGGTATTAAAACTATAAATACTTCATTAAATTTCACTTTTTTTTACTAAATTTGAAGTATTATTTAAAAACTCTACTAAAAATATCTTTTTATTAAAAAAATTATTGATAGGTTATTATATTTAATTAACTAGTACTAGTACTACGAACCAAGGCGTACCGAAGCTCTATACCCTCAGACGTACCGAATTCTTCTCATGTCGCGTACCGCGTACCCGAACCCGTACCACGTACCGAAGCGAACTACGAATTATGTGACTATGGTTAAAAGCAACTGGGTGATTCATGAATATCATTCTACCACCTTTGATGATAACCAGGTTTGTTTTGTTACAACAATGTTTAAACTTTATGAGTATGATATGAGTTTTTTCGGAAAAAATGTTGATTATCCTCCAAAATTTCGTAGAGGACTTTTGTTTTGTGTCGCTTGATGAAGAAAGCCGAGAAAAAAGCTGAAGAGGAAACTGATAGAATGATATGTGATGAAGGGGGGCCAAGTAAACACATGAGTTCCGATCGCGAAAATCAAGAAGCAGTTGAAGGAATTCTTGATGTAAGGATTTCATTCTTGATAAATGACAACCGAAATTTTGAGAACAAAGTCTTAATTTTAAACCTTTCTTACATGAAACATGCTTAGAATATGGAACCAATGTTTCAGGAACCTCATCAGGCCGAAAAGTACTTTCCTTTCTCAACATACCAGTCTTCAATCTCTGAAAATGAGATGGAAGTATCTTTATCGAACTCAGGATTTTATGATTCCGAAAGTGGACACATCGATATGCAGAGTCCGTTTGAAACTATTGACGAGGAAAATCAGTTCATCAATTCGATGTTAAATGACGGATATCTTGTTAATAGTGAAAAAAGAAGACACACTTTTGTCGGCTTGTCCTGTCCAGTCCGAGTCGTTGAGAATGATCTACTATGGAAGCAGTGACACAGATGTTGAATTAGTCTCTACGCCCGTAAATATTTTCTTTAATACATTCAGAAGTTCTGTTTTATTCATACTGTGATGTGGTTGTTTTTCTCTTCCTTTTGAAATGCTACTAGAATGGAATTTCATATTGTTTATTTTCTTCTAAAATTTTACAGTGTGGCAATGTTCTGGATACTTCAACGGCATTTCTTGAACATCCTAGTTCAGGAGAATACTATGCATCATTTCGAGATGATTTCGGGGGATTTGAGGCATCCTCTTGTGACTCGACTGCAAATAAACCTCGGGAGATGATCAATTGTGTTGAAATTTCTAGTGCACCTTCCACTCTAAGAAGAAGCAAAAACCAGTATCATCCAAGACCAGCCACCTTCATGTCAAAAAGAGCTGCTTCAAGACGATCTCAAACATAG
Protein sequence

>MS.gene050980.t1

MTNSFPVGFRFQPTDEELVNHYLKNKLFGNDSIVNNFIAEVDVCKFEPWDLPACSIIKSNDPEWFFFCPRDYKYANSKRFNRRTECGYWKATGLDRKIKVRGTNNVIGTKKTLVYYNGCRTTNYVTMVKSNWVIHEYHSTTFDDNQRTFVLCRLMKKAEKKAEEETDRMICDEGGPSKHMSSDRENQEAVEGILDNMEPMFQEPHQAEKYFPFSTYQSSISENEMEVSLSNSGFYDSESGHIDMQSPFETIDEENQFINSMLNDGYLSESLRMIYYGSSDTDVELVSTPCGNVLDTSTAFLEHPSSGEYYASFRDDFGGFEASSCDSTANKPREMINCVEISSAPSTLRRSKNQYHPRPATFMSKRAASRRSQT