AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene051542

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene051542.t1 MTR_1g015110 96.578 526 18 0 1 526 28 553 0.0 1041
MS.gene051542.t1 MTR_3g104710 66.729 532 163 4 1 526 26 549 0.0 688
MS.gene051542.t1 MTR_2g040500 51.826 438 162 7 113 526 133 545 3.87e-149 438
MS.gene051542.t1 MTR_4g125810 57.487 374 139 5 156 526 157 513 2.08e-142 420
MS.gene051542.t1 MTR_8g102550 51.133 309 133 7 213 521 103 393 3.86e-89 280
MS.gene051542.t1 MTR_3g068200 42.730 337 142 7 205 526 85 385 6.98e-79 252
MS.gene051542.t1 MTR_5g009370 46.732 306 133 6 214 517 54 331 8.88e-76 243
MS.gene051542.t1 MTR_1g028300 49.045 314 122 7 205 517 104 380 2.20e-74 241
MS.gene051542.t1 MTR_5g080680 44.660 309 118 6 211 503 100 371 2.20e-70 230
MS.gene051542.t1 MTR_5g080680 44.700 217 77 4 211 417 100 283 1.36e-46 164
MS.gene051542.t1 MTR_1g014640 36.093 302 135 7 213 514 78 321 1.76e-46 166
MS.gene051542.t1 MTR_1g013400 36.093 302 135 7 213 514 78 321 1.76e-46 166
MS.gene051542.t1 MTR_3g105730 36.424 302 134 7 213 514 35 278 3.72e-46 164
MS.gene051542.t1 MTR_3g105730 36.424 302 134 7 213 514 13 256 5.41e-46 162
MS.gene051542.t1 MTR_1g115570 33.974 312 134 8 213 519 96 340 9.36e-43 155
MS.gene051542.t1 MTR_3g091060 35.484 310 140 8 214 522 96 346 3.18e-42 155
MS.gene051542.t1 MTR_3g464650 33.984 256 134 5 263 517 94 315 1.34e-36 138
MS.gene051542.t1 MTR_5g071550 33.333 273 146 6 246 517 138 375 3.51e-35 135
MS.gene051542.t1 MTR_3g464700 38.806 201 103 3 263 462 118 299 8.72e-35 134
MS.gene051542.t1 MTR_4g123080 30.627 271 154 6 258 522 108 350 3.35e-33 130
MS.gene051542.t1 MTR_4g123080 30.627 271 154 6 258 522 90 332 3.45e-33 130
MS.gene051542.t1 MTR_4g094208 35.448 268 123 8 256 517 54 277 5.66e-33 127
MS.gene051542.t1 MTR_1g050520 31.013 316 161 9 209 518 382 646 1.44e-31 129
MS.gene051542.t1 MTR_1g086350 32.394 284 146 10 258 523 113 368 2.32e-31 125
MS.gene051542.t1 MTR_1g086350 32.394 284 146 10 258 523 97 352 2.81e-31 125
MS.gene051542.t1 MTR_5g024340 31.179 263 137 7 258 514 119 343 3.68e-30 122
MS.gene051542.t1 MTR_5g071550 36.715 207 110 4 246 451 138 324 8.83e-30 120
MS.gene051542.t1 MTR_4g116420 28.840 319 168 10 207 514 78 348 1.13e-29 120
MS.gene051542.t1 MTR_1g086350 31.449 283 148 10 259 523 12 266 1.49e-29 118
MS.gene051542.t1 MTR_3g107880 29.321 324 172 11 205 519 15 290 2.39e-29 118
MS.gene051542.t1 MTR_2g033000 30.943 265 149 6 258 516 95 331 3.53e-29 119
MS.gene051542.t1 MTR_3g107880 29.321 324 172 11 205 519 72 347 6.25e-29 118
MS.gene051542.t1 MTR_3g107880 29.321 324 172 11 205 519 73 348 6.66e-29 118
MS.gene051542.t1 MTR_5g063940 35.135 259 122 8 263 517 19 235 7.85e-29 114
MS.gene051542.t1 MTR_3g074610 33.333 258 128 7 263 517 66 282 8.95e-29 115
MS.gene051542.t1 MTR_5g063940 35.135 259 122 8 263 517 66 282 6.20e-28 113
MS.gene051542.t1 MTR_2g008850 32.593 270 128 8 256 517 12 235 1.02e-26 108
MS.gene051542.t1 MTR_4g007440 29.412 306 126 9 213 466 24 291 2.71e-26 110
MS.gene051542.t1 MTR_3g105880 27.778 306 131 7 213 466 24 291 4.40e-26 108
MS.gene051542.t1 MTR_1g014190 28.846 312 130 10 213 471 24 296 4.70e-26 109
MS.gene051542.t1 MTR_2g078760 31.169 308 147 10 214 517 8 254 4.93e-26 107
MS.gene051542.t1 MTR_3g105880 27.778 306 131 7 213 466 24 291 5.39e-26 109
MS.gene051542.t1 MTR_2g008850 32.593 270 128 8 256 517 58 281 7.42e-26 107
MS.gene051542.t1 MTR_1g014190 30.268 261 112 8 261 468 88 331 1.38e-25 108
MS.gene051542.t1 MTR_8g463130 34.510 255 123 8 263 514 38 251 1.84e-25 105
MS.gene051542.t1 MTR_2g078760 31.169 308 147 10 214 517 87 333 2.03e-25 107
MS.gene051542.t1 MTR_8g463130 34.510 255 123 8 263 514 66 279 2.78e-25 105
MS.gene051542.t1 MTR_4g094542 32.157 255 128 6 263 514 150 362 4.71e-25 107
MS.gene051542.t1 MTR_1g071370 34.529 223 91 7 341 517 226 439 1.24e-24 108
MS.gene051542.t1 MTR_3g491830 26.801 347 153 13 213 516 61 349 3.15e-23 102
MS.gene051542.t1 MTR_4g118340 25.915 328 162 12 236 517 49 341 2.93e-21 96.3
MS.gene051542.t1 MTR_3g105730 32.632 190 90 6 213 402 35 186 1.47e-20 90.9
MS.gene051542.t1 MTR_6g081850 27.338 278 140 10 264 517 80 319 4.21e-20 91.7
MS.gene051542.t1 MTR_2g078760 34.715 193 103 6 263 452 117 289 6.95e-20 90.5
MS.gene051542.t1 MTR_7g070510 31.489 235 122 9 263 461 92 323 7.25e-20 92.8
MS.gene051542.t1 MTR_1g083690 33.929 224 120 9 263 461 89 309 1.25e-19 90.9
MS.gene051542.t1 MTR_3g101540 31.022 274 133 10 264 521 67 300 1.43e-19 91.7
MS.gene051542.t1 MTR_3g101540 31.022 274 133 10 264 521 67 300 1.65e-19 91.3
MS.gene051542.t1 MTR_2g020970 26.282 312 153 11 249 517 65 342 3.69e-19 89.7
MS.gene051542.t1 MTR_4g120410 33.766 231 121 9 263 464 91 318 3.81e-19 89.4
MS.gene051542.t1 MTR_2g020970 26.282 312 153 11 249 517 65 342 8.14e-19 89.4
MS.gene051542.t1 MTR_1g110210 30.035 283 147 10 247 518 57 299 1.90e-18 87.0
MS.gene051542.t1 MTR_1g116260 29.153 295 148 11 263 516 80 354 7.53e-18 85.9
MS.gene051542.t1 MTR_1g019760 29.259 270 143 9 264 521 66 299 2.08e-17 84.7
MS.gene051542.t1 MTR_1g019760 29.259 270 143 9 264 521 66 299 3.46e-17 84.3
MS.gene051542.t1 MTR_7g021530 29.091 275 144 10 233 461 8 277 3.75e-17 83.6
MS.gene051542.t1 MTR_1g016620 29.515 227 125 8 263 461 68 287 5.92e-17 82.8
MS.gene051542.t1 MTR_7g021530 29.752 242 129 8 261 461 86 327 8.26e-17 83.2
MS.gene051542.t1 MTR_2g435550 30.876 217 122 7 265 456 94 307 8.33e-17 82.4
MS.gene051542.t1 MTR_2g435550 30.594 219 120 8 265 456 80 293 1.00e-16 82.0
MS.gene051542.t1 MTR_6g087000 23.188 345 186 13 159 464 41 345 1.35e-16 83.6
MS.gene051542.t1 MTR_2g435550 31.050 219 119 9 265 456 94 307 1.42e-16 82.0
MS.gene051542.t1 MTR_7g021530 29.752 242 129 8 261 461 127 368 1.48e-16 82.4
MS.gene051542.t1 MTR_7g080170 29.885 261 127 9 253 461 87 343 1.61e-16 82.8
MS.gene051542.t1 MTR_6g087000 23.188 345 186 13 159 464 41 345 1.89e-16 83.2
MS.gene051542.t1 MTR_1g106855 30.303 297 144 14 263 516 61 337 2.09e-16 81.6
MS.gene051542.t1 MTR_7g112490 30.472 233 125 8 263 461 91 320 3.53e-16 80.9
MS.gene051542.t1 MTR_7g112490 30.472 233 125 8 263 461 109 338 4.29e-16 80.5
MS.gene051542.t1 MTR_4g037470 28.279 244 134 6 256 461 98 338 5.63e-16 80.9
MS.gene051542.t1 MTR_2g090190 26.129 310 169 10 209 461 16 322 5.64e-16 80.9
MS.gene051542.t1 MTR_4g037470 28.279 244 134 6 256 461 89 329 5.84e-16 80.9
MS.gene051542.t1 MTR_7g112430 29.520 271 135 10 264 518 69 299 6.95e-16 80.5
MS.gene051542.t1 MTR_8g017240 32.273 220 123 8 263 461 86 300 1.34e-15 79.0
MS.gene051542.t1 MTR_3g032700 27.491 291 162 9 263 516 68 346 1.92e-15 79.0
MS.gene051542.t1 MTR_1g083750 30.712 267 137 10 264 518 69 299 2.75e-15 78.6
MS.gene051542.t1 MTR_7g029240 30.583 206 118 8 264 456 69 262 3.62e-15 78.2
MS.gene051542.t1 MTR_1g067210 27.181 298 159 12 258 516 72 350 5.31e-15 77.0
MS.gene051542.t1 MTR_3g032660 27.148 291 163 9 263 516 68 346 8.04e-15 77.0
MS.gene051542.t1 MTR_7g080170 34.337 166 90 5 312 461 73 235 1.23e-14 76.3
MS.gene051542.t1 MTR_1g106855 31.799 239 113 12 263 464 61 286 1.73e-14 74.7
MS.gene051542.t1 MTR_8g074930 27.801 241 116 8 263 463 79 301 2.18e-14 75.5
MS.gene051542.t1 MTR_7g100240 28.870 239 121 10 258 461 67 291 2.79e-14 74.7
MS.gene051542.t1 MTR_5g071550 31.507 146 80 3 246 391 138 263 1.53e-13 71.6
MS.gene051542.t1 MTR_7g060770 25.000 292 175 10 263 517 263 547 2.87e-13 72.8
MS.gene051542.t1 MTR_1g112840 26.556 241 119 9 263 463 81 303 3.80e-13 71.6
MS.gene051542.t1 MTR_1g083750 34.715 193 92 8 338 518 37 207 7.49e-13 70.1
MS.gene051542.t1 MTR_7g090530 27.848 237 121 11 263 463 69 291 1.13e-12 70.5
MS.gene051542.t1 MTR_2g033910 25.086 291 166 10 263 516 75 350 3.21e-12 68.6
MS.gene051542.t1 MTR_4g113480 29.565 230 117 9 263 461 74 289 7.08e-12 68.2
MS.gene051542.t1 MTR_4g123080 31.757 148 75 5 381 522 110 237 1.40e-11 65.5
MS.gene051542.t1 MTR_8g074930 31.210 157 76 3 339 463 33 189 1.97e-11 65.1
MS.gene051542.t1 MTR_0015s0140 26.383 235 122 10 263 461 79 298 2.32e-11 65.9
MS.gene051542.t1 MTR_3g032590 30.093 216 107 8 340 516 142 352 7.89e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene051542.t1 AT1G72770 56.422 436 161 5 104 526 92 511 1.96e-163 474
MS.gene051542.t1 AT1G72770 56.422 436 161 5 104 526 92 511 1.96e-163 474
MS.gene051542.t1 AT1G72770 56.422 436 161 5 104 526 92 511 1.96e-163 474
MS.gene051542.t1 AT1G17550 55.607 428 169 4 110 526 94 511 7.71e-159 462
MS.gene051542.t1 AT1G17550 55.607 428 169 4 110 526 94 511 7.71e-159 462
MS.gene051542.t1 AT5G57050 66.964 336 94 6 197 526 97 421 1.79e-156 452
MS.gene051542.t1 AT5G57050 66.964 336 94 6 197 526 57 381 2.97e-156 451
MS.gene051542.t1 AT4G26080 65.476 336 92 6 197 525 113 431 7.10e-149 434
MS.gene051542.t1 AT1G72770 51.840 326 128 5 104 416 92 401 5.45e-98 302
MS.gene051542.t1 AT1G72770 51.840 326 128 5 104 416 92 401 5.45e-98 302
MS.gene051542.t1 AT5G57050 62.222 225 72 5 197 420 97 309 1.47e-91 283
MS.gene051542.t1 AT1G07430 42.222 360 137 8 202 521 110 438 2.86e-79 255
MS.gene051542.t1 AT2G29380 45.283 318 131 7 211 517 76 361 7.05e-78 249
MS.gene051542.t1 AT3G11410 44.872 312 118 7 170 463 68 343 5.00e-74 240
MS.gene051542.t1 AT5G51760 42.284 324 152 5 211 517 77 382 1.20e-68 226
MS.gene051542.t1 AT5G51760 42.284 324 152 5 211 517 107 412 2.91e-68 226
MS.gene051542.t1 AT5G59220 44.918 305 123 7 184 474 79 352 6.88e-68 224
MS.gene051542.t1 AT5G59220 41.328 271 114 7 162 416 55 296 5.55e-48 169
MS.gene051542.t1 AT5G53140 36.066 305 135 9 214 517 103 348 3.91e-45 164
MS.gene051542.t1 AT5G53140 36.066 305 135 9 214 517 103 348 3.91e-45 164
MS.gene051542.t1 AT5G24940 35.644 303 135 9 213 514 34 277 1.34e-44 163
MS.gene051542.t1 AT5G10740 35.099 302 138 7 213 514 34 277 3.31e-44 160
MS.gene051542.t1 AT5G10740 35.099 302 138 7 213 514 34 277 3.31e-44 160
MS.gene051542.t1 AT4G31750 34.768 302 139 7 213 514 34 277 3.47e-44 158
MS.gene051542.t1 AT4G31750 34.768 302 139 7 213 514 34 277 4.62e-44 158
MS.gene051542.t1 AT4G31750 34.768 302 139 7 213 514 34 277 4.62e-44 158
MS.gene051542.t1 AT1G43900 34.628 309 135 9 213 517 124 369 9.79e-42 154
MS.gene051542.t1 AT1G67820 32.222 360 148 10 213 516 85 404 3.74e-40 150
MS.gene051542.t1 AT1G67820 32.500 360 147 11 213 516 121 440 1.11e-39 150
MS.gene051542.t1 AT2G40180 37.500 256 129 7 263 517 161 386 2.68e-38 145
MS.gene051542.t1 AT1G07160 33.550 307 148 7 214 516 122 376 4.34e-35 135
MS.gene051542.t1 AT2G30020 34.416 308 145 10 214 517 139 393 6.41e-35 135
MS.gene051542.t1 AT2G33700 33.588 262 130 8 263 518 123 346 3.01e-32 127
MS.gene051542.t1 AT3G17250 31.136 273 146 8 263 521 158 402 6.27e-32 127
MS.gene051542.t1 AT2G25620 30.769 312 155 10 220 519 97 359 1.48e-31 126
MS.gene051542.t1 AT2G25620 30.769 312 155 10 220 519 97 359 1.48e-31 126
MS.gene051542.t1 AT2G40860 29.907 321 157 10 209 518 289 552 2.42e-31 128
MS.gene051542.t1 AT2G40860 29.907 321 157 10 209 518 387 650 4.28e-31 128
MS.gene051542.t1 AT3G51470 31.939 263 135 8 263 519 62 286 5.50e-31 122
MS.gene051542.t1 AT1G48040 32.727 275 141 9 263 521 116 362 7.86e-31 124
MS.gene051542.t1 AT3G51470 31.939 263 135 8 263 519 106 330 9.43e-31 123
MS.gene051542.t1 AT2G34740 33.333 258 126 8 263 516 119 334 3.51e-29 118
MS.gene051542.t1 AT1G22280 32.950 261 131 8 263 517 65 287 6.31e-29 116
MS.gene051542.t1 AT3G62260 30.798 263 149 7 258 514 22 257 8.80e-29 116
MS.gene051542.t1 AT3G62260 30.798 263 149 7 258 514 112 347 3.14e-28 116
MS.gene051542.t1 AT3G62260 30.798 263 149 7 258 514 111 346 3.15e-28 116
MS.gene051542.t1 AT1G78200 32.171 258 134 8 263 517 19 238 3.50e-28 112
MS.gene051542.t1 AT1G78200 32.171 258 134 8 263 517 19 238 3.50e-28 112
MS.gene051542.t1 AT1G22280 32.950 261 125 8 263 517 65 281 6.68e-28 113
MS.gene051542.t1 AT1G78200 32.558 258 133 8 263 517 64 283 1.36e-27 112
MS.gene051542.t1 AT1G78200 32.558 258 133 8 263 517 64 283 1.36e-27 112
MS.gene051542.t1 AT1G78200 32.558 258 133 8 263 517 64 283 1.36e-27 112
MS.gene051542.t1 AT1G34750 33.333 258 128 8 263 517 66 282 1.91e-27 112
MS.gene051542.t1 AT1G34750 33.333 258 128 8 263 517 66 282 1.91e-27 112
MS.gene051542.t1 AT1G34750 33.333 258 128 8 263 517 66 282 1.91e-27 112
MS.gene051542.t1 AT2G40860 29.740 269 141 8 209 466 387 618 4.68e-27 115
MS.gene051542.t1 AT2G25070 30.508 295 137 12 213 466 24 291 4.44e-26 109
MS.gene051542.t1 AT2G25070 30.508 295 137 12 213 466 24 291 4.44e-26 109
MS.gene051542.t1 AT2G20630 32.567 261 126 9 263 517 63 279 1.06e-24 104
MS.gene051542.t1 AT3G15260 32.171 258 131 7 263 517 73 289 1.37e-24 103
MS.gene051542.t1 AT3G15260 32.171 258 131 7 263 517 73 289 1.37e-24 103
MS.gene051542.t1 AT4G31860 28.105 306 130 9 213 466 24 291 3.75e-24 103
MS.gene051542.t1 AT2G20630 32.685 257 123 9 263 513 63 275 6.04e-24 102
MS.gene051542.t1 AT3G63340 35.000 240 87 9 341 524 233 459 8.18e-24 105
MS.gene051542.t1 AT4G31860 28.105 306 130 9 213 466 24 291 9.17e-24 103
MS.gene051542.t1 AT3G63340 35.000 240 87 9 341 524 233 459 2.26e-23 105
MS.gene051542.t1 AT3G63340 35.000 240 87 9 341 524 233 459 2.60e-23 104
MS.gene051542.t1 AT3G63340 35.000 240 87 9 341 524 233 459 2.60e-23 104
MS.gene051542.t1 AT3G63340 35.000 240 87 9 341 524 233 459 2.60e-23 104
MS.gene051542.t1 AT3G63340 35.000 240 87 9 341 524 233 459 2.60e-23 104
MS.gene051542.t1 AT3G63340 35.000 240 87 9 341 524 233 459 2.81e-23 104
MS.gene051542.t1 AT3G63340 35.000 240 87 9 341 524 233 459 3.66e-23 104
MS.gene051542.t1 AT3G63340 35.000 240 87 9 341 524 233 459 3.66e-23 104
MS.gene051542.t1 AT3G63340 35.000 240 87 9 341 524 233 459 3.72e-23 104
MS.gene051542.t1 AT3G63320 27.844 334 153 12 265 525 71 389 4.04e-23 102
MS.gene051542.t1 AT3G63320 33.191 235 94 8 341 525 85 306 1.04e-22 100
MS.gene051542.t1 AT4G28400 31.698 265 121 11 263 516 45 260 1.75e-22 97.4
MS.gene051542.t1 AT4G28400 29.114 316 158 13 218 516 16 282 2.12e-22 97.8
MS.gene051542.t1 AT3G06270 26.871 294 140 8 262 517 87 343 7.83e-22 97.4
MS.gene051542.t1 AT1G34750 33.663 202 109 6 263 461 66 245 8.22e-22 95.1
MS.gene051542.t1 AT3G16800 32.273 220 127 6 263 463 93 309 1.28e-21 96.7
MS.gene051542.t1 AT3G16800 32.273 220 127 6 263 463 93 309 1.28e-21 96.7
MS.gene051542.t1 AT3G16800 32.273 220 127 6 263 463 93 309 1.28e-21 96.7
MS.gene051542.t1 AT3G16800 29.044 272 157 9 266 518 1 255 7.10e-21 92.8
MS.gene051542.t1 AT3G16800 29.044 272 157 9 266 518 1 255 7.10e-21 92.8
MS.gene051542.t1 AT2G34740 36.318 201 97 9 263 456 133 309 7.95e-21 94.0
MS.gene051542.t1 AT2G34740 34.343 198 105 7 263 456 115 291 8.00e-21 93.6
MS.gene051542.t1 AT4G27800 27.405 343 156 12 213 516 60 348 1.74e-20 94.0
MS.gene051542.t1 AT1G09160 31.228 285 143 11 246 518 56 299 2.04e-20 94.4
MS.gene051542.t1 AT1G09160 31.228 285 143 11 246 518 56 299 2.04e-20 94.4
MS.gene051542.t1 AT4G31860 28.276 290 118 9 213 450 24 275 3.34e-20 91.3
MS.gene051542.t1 AT4G08260 31.373 255 109 9 264 517 20 209 1.46e-19 87.8
MS.gene051542.t1 AT5G26010 32.735 223 117 8 261 461 71 282 1.48e-19 90.5
MS.gene051542.t1 AT3G63340 40.491 163 71 7 375 524 343 492 4.92e-19 91.7
MS.gene051542.t1 AT5G02760 31.034 232 114 7 263 461 72 290 1.67e-18 87.8
MS.gene051542.t1 AT1G68410 28.720 289 153 10 247 523 62 309 1.96e-18 88.2
MS.gene051542.t1 AT1G68410 28.720 289 153 10 247 523 62 309 1.96e-18 88.2
MS.gene051542.t1 AT1G68410 28.720 289 153 10 247 523 62 309 1.96e-18 88.2
MS.gene051542.t1 AT1G68410 28.720 289 153 10 247 523 62 309 1.96e-18 88.2
MS.gene051542.t1 AT4G03415 29.796 245 130 6 256 461 90 331 2.52e-18 88.2
MS.gene051542.t1 AT4G03415 29.796 245 130 6 256 461 90 331 2.52e-18 88.2
MS.gene051542.t1 AT4G03415 29.796 245 130 6 256 461 90 331 2.52e-18 88.2
MS.gene051542.t1 AT1G18030 26.480 321 160 13 220 517 82 349 2.57e-18 87.0
MS.gene051542.t1 AT2G40860 27.236 246 131 8 209 443 387 595 5.69e-18 87.8
MS.gene051542.t1 AT1G18030 28.906 256 122 11 220 452 82 300 1.47e-17 84.0
MS.gene051542.t1 AT4G28400 28.745 247 141 9 218 452 16 239 4.47e-17 81.6
MS.gene051542.t1 AT5G27930 32.000 225 124 8 263 461 92 313 9.02e-17 82.4
MS.gene051542.t1 AT5G27930 32.000 225 124 8 263 461 92 313 9.02e-17 82.4
MS.gene051542.t1 AT1G47380 28.938 273 140 10 264 521 65 298 9.69e-17 83.2
MS.gene051542.t1 AT3G12620 27.333 300 156 11 258 516 79 357 1.32e-16 82.0
MS.gene051542.t1 AT3G12620 27.333 300 156 11 258 516 79 357 1.32e-16 82.0
MS.gene051542.t1 AT5G01700 31.674 221 125 8 261 458 27 244 1.34e-16 81.6
MS.gene051542.t1 AT4G38520 27.703 296 147 12 263 514 81 353 1.97e-16 81.6
MS.gene051542.t1 AT4G38520 27.703 296 147 12 263 514 81 353 1.97e-16 81.6
MS.gene051542.t1 AT4G32950 29.137 278 144 10 265 520 74 320 2.20e-16 80.9
MS.gene051542.t1 AT1G03590 29.752 242 131 7 256 461 83 321 3.11e-16 81.6
MS.gene051542.t1 AT5G01700 31.674 221 125 8 261 458 76 293 3.38e-16 80.9
MS.gene051542.t1 AT4G27800 26.962 293 138 10 213 466 60 315 6.99e-16 79.3
MS.gene051542.t1 AT4G27800 26.962 293 138 10 213 466 60 315 8.08e-16 79.0
MS.gene051542.t1 AT3G55050 26.510 298 161 10 258 516 80 358 9.49e-16 79.7
MS.gene051542.t1 AT3G55050 26.510 298 161 10 258 516 80 358 9.49e-16 79.7
MS.gene051542.t1 AT1G16220 29.084 251 135 11 253 461 86 335 1.09e-15 80.1
MS.gene051542.t1 AT3G05640 31.982 222 122 8 263 461 93 308 2.01e-15 78.2
MS.gene051542.t1 AT3G05640 31.982 222 122 8 263 461 93 308 2.01e-15 78.2
MS.gene051542.t1 AT3G05640 31.982 222 122 8 263 461 93 308 2.01e-15 78.2
MS.gene051542.t1 AT5G36250 28.287 251 133 9 261 464 96 346 2.96e-15 78.6
MS.gene051542.t1 AT1G17545 75.000 48 12 0 333 380 131 178 6.44e-15 73.6
MS.gene051542.t1 AT1G79630 27.372 274 130 10 253 461 19 288 6.62e-15 77.4
MS.gene051542.t1 AT1G79630 27.372 274 130 10 253 461 19 288 6.62e-15 77.4
MS.gene051542.t1 AT4G33920 26.144 306 166 11 253 516 51 338 6.72e-15 77.0
MS.gene051542.t1 AT1G79630 27.372 274 130 10 253 461 89 358 1.03e-14 77.0
MS.gene051542.t1 AT1G79630 27.372 274 130 10 253 461 85 354 1.12e-14 77.0
MS.gene051542.t1 AT3G27140 26.744 258 105 4 263 520 19 192 3.34e-14 72.8
MS.gene051542.t1 AT1G79630 35.036 137 73 3 341 461 112 248 8.68e-14 73.6
MS.gene051542.t1 AT1G79630 35.036 137 73 3 341 461 112 248 8.68e-14 73.6
MS.gene051542.t1 AT1G79630 35.036 137 73 3 341 461 112 248 8.68e-14 73.6
MS.gene051542.t1 AT1G79630 35.036 137 73 3 341 461 112 248 8.68e-14 73.6
MS.gene051542.t1 AT3G02750 34.356 163 88 5 312 458 190 349 8.83e-14 74.3
MS.gene051542.t1 AT3G02750 34.356 163 88 5 312 458 190 349 8.83e-14 74.3
MS.gene051542.t1 AT5G06750 27.500 240 123 8 263 464 82 308 1.05e-12 70.5
MS.gene051542.t1 AT5G06750 27.500 240 123 8 263 464 82 308 1.05e-12 70.5
MS.gene051542.t1 AT4G33920 27.347 245 131 8 314 516 16 255 1.29e-11 66.2
MS.gene051542.t1 AT4G33920 28.111 217 112 6 339 516 14 225 5.91e-11 63.5
MS.gene051542.t1 AT2G05050 33.333 138 67 4 389 517 69 190 6.66e-11 62.0

Find 130 sgRNAs with CRISPR-Local

Find 300 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTTGTCTTTGCTTCCTTTC+TGG 0.045002 1.3:-7097136 None:intergenic
GCAACTGCGTCTTCCATTTC+TGG 0.094152 1.3:-7093771 None:intergenic
GAATCATCATCCTCACTTTC+TGG 0.164991 1.3:-7093348 None:intergenic
AATTGGATTATATCCCATTA+TGG 0.172694 1.3:+7093721 MS.gene051542:CDS
TTTCACCAAATGTTTCTTAA+AGG 0.191892 1.3:+7094128 MS.gene051542:CDS
GCAGTGGAGCCAACAGTTTC+TGG 0.231039 1.3:-7094195 None:intergenic
GTTGCTCACACCGCTGATTT+GGG 0.258765 1.3:+7093537 MS.gene051542:CDS
CTCGAAAACGTATACTTCTT+TGG 0.264509 1.3:+7097018 MS.gene051542:CDS
TCATAATAAGAGTGGCAATT+TGG 0.264601 1.3:+7093203 MS.gene051542:CDS
TGTTGCTCACACCGCTGATT+TGG 0.282659 1.3:+7093536 MS.gene051542:CDS
CCGCAAATGACCCATTTCTT+TGG 0.291037 1.3:+7093876 MS.gene051542:CDS
AGAGGATGAATGTCTCATTT+TGG 0.293893 1.3:+7096944 MS.gene051542:CDS
ATTCCCATTCAGATGCTAAT+TGG 0.295899 1.3:+7093816 MS.gene051542:CDS
CGAGGAATGAATTGAACTTC+TGG 0.323228 1.3:-7096915 None:intergenic
TGGAATGGCCATCGTGTATT+TGG 0.332051 1.3:+7094470 MS.gene051542:CDS
TTCTTGCATATTCATCTTCT+CGG 0.337117 1.3:-7094418 None:intergenic
TTTGAAACCGTCAATTATTC+CGG 0.343631 1.3:+7096890 MS.gene051542:CDS
CTTGCAATGTCAAGATCTAT+TGG 0.345690 1.3:+7094497 MS.gene051542:CDS
ATTGGATTATATCCCATTAT+GGG 0.350958 1.3:+7093722 MS.gene051542:CDS
TTTCCTCGGTCAATGCAATA+TGG 0.366641 1.3:-7094035 None:intergenic
GAGCAACTGTAGAAGGCTTT+AGG 0.372631 1.3:-7093644 None:intergenic
CATCATAGACTCCAAAGAAA+TGG 0.377707 1.3:-7093887 None:intergenic
AATCATCATCCTCACTTTCT+GGG 0.380381 1.3:-7093347 None:intergenic
AGTGATATGAATCCCCATAA+TGG 0.380584 1.3:-7093735 None:intergenic
ATCAACCTTTAAGAAACATT+TGG 0.381965 1.3:-7094133 None:intergenic
TCTGATTCAACTCCAATCTC+TGG 0.385927 1.3:-7093621 None:intergenic
AGCTGATGAGCAACTGTAGA+AGG 0.391208 1.3:-7093651 None:intergenic
AAAAGTCACTCAACCGGTAT+TGG 0.399911 1.3:+7093245 MS.gene051542:CDS
GGATGATGATTCATTATCAT+TGG 0.403575 1.3:+7093359 MS.gene051542:CDS
GGCAATTTGGATGTTGAAAT+CGG 0.405405 1.3:+7093216 MS.gene051542:CDS
TCATTTGCGGCCTAAAACAC+CGG 0.408501 1.3:-7093863 None:intergenic
GTCAGTGAAAACAGTAGTTT+AGG 0.415062 1.3:+7093423 MS.gene051542:CDS
GCATATTCATCTTCTCGGTT+CGG 0.417201 1.3:-7094413 None:intergenic
GGAAGGAGAAAGTCCTTTGA+TGG 0.419922 1.3:+7093272 MS.gene051542:CDS
GTGATATGAATCCCCATAAT+GGG 0.422898 1.3:-7093734 None:intergenic
TCTGATAATACTTCAGAAGT+TGG 0.425515 1.3:+7093465 MS.gene051542:CDS
GGAAACCTTAGCTACAGAAT+TGG 0.426314 1.3:-7093151 None:intergenic
CAACGAAACGGTTGTAGGTT+CGG 0.429166 1.3:+7093173 MS.gene051542:CDS
TCTGCTGCTGCTTGTGCCGC+AGG 0.429737 1.3:-7097092 None:intergenic
CATTTCTTTGGAGTCTATGA+TGG 0.430905 1.3:+7093888 MS.gene051542:CDS
TTTAAGCTGATGGCGGATGC+AGG 0.433786 1.3:+7093120 MS.gene051542:CDS
GTGAATCTTGACCCAGAGAT+TGG 0.434954 1.3:+7093609 MS.gene051542:CDS
CTTGACAAGTTCTATTTCCT+CGG 0.439172 1.3:-7094049 None:intergenic
TGATGGCCATGGTGGCTCTC+AGG 0.443960 1.3:+7093905 MS.gene051542:CDS
ATGTGGACGAAGACCAGAAA+TGG 0.445581 1.3:+7093758 MS.gene051542:CDS
ATCCGCCATCAGCTTAAATC+TGG 0.451378 1.3:-7093115 None:intergenic
TTAAAGGTTGATGCAGAAGT+TGG 0.451892 1.3:+7094144 MS.gene051542:CDS
GTCAAGGAAAGTCTAATTGA+TGG 0.453271 1.3:+7094066 MS.gene051542:CDS
ATTCATTCCTCGTGCGAAAG+AGG 0.459888 1.3:+7096926 MS.gene051542:CDS
CACTCAACCGGTATTGGAAA+AGG 0.463060 1.3:+7093251 MS.gene051542:CDS
ATGAATTGAACTTCTGGATC+CGG 0.468005 1.3:-7096909 None:intergenic
CTGATAATACTTCAGAAGTT+GGG 0.471233 1.3:+7093466 MS.gene051542:CDS
TCATCAGCTGCCTCAGGAAG+AGG 0.476248 1.3:+7093665 MS.gene051542:CDS
ATCACCAATTAGCATCTGAA+TGG 0.480260 1.3:-7093820 None:intergenic
ATTGTCCAATTCTGTAGCTA+AGG 0.487066 1.3:+7093146 MS.gene051542:CDS
ATCATAGACTCCAAAGAAAT+GGG 0.490546 1.3:-7093886 None:intergenic
CCAAAGAAATGGGTCATTTG+CGG 0.495267 1.3:-7093876 None:intergenic
TTGCTCACACCGCTGATTTG+GGG 0.501350 1.3:+7093538 MS.gene051542:CDS
AAGGTTGATGCAGAAGTTGG+AGG 0.502623 1.3:+7094147 MS.gene051542:CDS
AAACACCGGTTTATTCCATC+AGG 0.504331 1.3:-7093849 None:intergenic
CGAACCTACAACCGTTTCGT+TGG 0.504760 1.3:-7093172 None:intergenic
TTTGGCTAGTGATGGTCTAT+GGG 0.504817 1.3:+7096962 MS.gene051542:CDS
AGTTGCTCATCAGCTGCCTC+AGG 0.504892 1.3:+7093659 MS.gene051542:CDS
GTTTCCAACGAAACGGTTGT+AGG 0.506300 1.3:+7093168 MS.gene051542:CDS
AGCTAAGGTTTCCAACGAAA+CGG 0.508268 1.3:+7093161 MS.gene051542:CDS
TCTGGATCCGGAATAATTGA+CGG 0.509776 1.3:-7096897 None:intergenic
ACTACCCTCGGAAAGGGGAG+AGG 0.509832 1.3:+7097061 MS.gene051542:CDS
CATGGAACTACCCTCGGAAA+GGG 0.512080 1.3:+7097055 MS.gene051542:CDS
TATTACAAAAGTCACTCAAC+CGG 0.514290 1.3:+7093239 MS.gene051542:CDS
TGCTCACACCGCTGATTTGG+GGG 0.515105 1.3:+7093539 MS.gene051542:CDS
TCACCAATTAGCATCTGAAT+GGG 0.516982 1.3:-7093819 None:intergenic
CATATTATAGTTGCAAATTG+TGG 0.518486 1.3:+7094243 MS.gene051542:CDS
TTCTTTGCCACGACAAAGAA+CGG 0.525190 1.3:-7094277 None:intergenic
GATGATTCATTATCATTGGA+AGG 0.525235 1.3:+7093363 MS.gene051542:CDS
TCGAATCGCGCTCTCCAGAA+AGG 0.530906 1.3:+7097122 MS.gene051542:CDS
GCTCACACCGCTGATTTGGG+GGG 0.537135 1.3:+7093540 MS.gene051542:CDS
TCGAGAGCCGTTCTTTGTCG+TGG 0.537353 1.3:+7094270 MS.gene051542:CDS
GAACGAGTGTAACAGTTGTC+CGG 0.539242 1.3:+7093688 MS.gene051542:CDS
TTTGGAGTCTATGATGGCCA+TGG 0.539364 1.3:+7093894 MS.gene051542:CDS
CTACCCTCGGAAAGGGGAGA+GGG 0.541861 1.3:+7097062 MS.gene051542:CDS
CTCACACCGCTGATTTGGGG+GGG 0.545195 1.3:+7093541 MS.gene051542:CDS
CTGATTCAACTCCAATCTCT+GGG 0.546780 1.3:-7093620 None:intergenic
ACGCAGTTGCAACTGTTCCT+CGG 0.546920 1.3:+7093784 MS.gene051542:CDS
TGGTCCACTGATAACGCCAT+TGG 0.547435 1.3:-7094300 None:intergenic
CATCAGCTGCCTCAGGAAGA+GGG 0.548267 1.3:+7093666 MS.gene051542:CDS
ATTGGTGATCGAGTACCTGA+TGG 0.554508 1.3:+7093834 MS.gene051542:CDS
GAGTACCTGATGGAATAAAC+CGG 0.557358 1.3:+7093844 MS.gene051542:CDS
ATTGATGGAGGTCTCAAAGA+TGG 0.564514 1.3:+7094081 MS.gene051542:CDS
TGGGATATCATATCCATCAA+AGG 0.572598 1.3:-7093285 None:intergenic
CATTCATCCTCTTTCGCACG+AGG 0.572975 1.3:-7096933 None:intergenic
TTGGATTATATCCCATTATG+GGG 0.575592 1.3:+7093723 MS.gene051542:CDS
TTGTCGTGGCAAAGAACCAA+TGG 0.576382 1.3:+7094284 MS.gene051542:CDS
CAAGATTCACTGCCACAGCA+AGG 0.577058 1.3:-7093596 None:intergenic
AAGATTCACTGCCACAGCAA+GGG 0.578634 1.3:-7093595 None:intergenic
ACTACCCTCTCCCCTTTCCG+AGG 0.579476 1.3:-7097066 None:intergenic
AAGATGGTTGCCAAGATCAG+TGG 0.579539 1.3:+7094097 MS.gene051542:CDS
TATGCAAGAATTGAAGCAGC+CGG 0.584084 1.3:+7094431 MS.gene051542:CDS
TTAAGCTGATGGCGGATGCA+GGG 0.585306 1.3:+7093121 MS.gene051542:CDS
TTGCTCTTATACTTTCGTTG+AGG 0.587887 1.3:-7097185 None:intergenic
AGATTCACTGCCACAGCAAG+GGG 0.592961 1.3:-7093594 None:intergenic
GCATGGAACTACCCTCGGAA+AGG 0.594104 1.3:+7097054 MS.gene051542:CDS
AAACGGCATGGAACTACCCT+CGG 0.595649 1.3:+7097049 MS.gene051542:CDS
AGAACCAATGGCGTTATCAG+TGG 0.595715 1.3:+7094296 MS.gene051542:CDS
CGAGGAAATAGAACTTGTCA+AGG 0.596007 1.3:+7094050 MS.gene051542:CDS
AGTGAAAACAGTAGTTTAGG+TGG 0.602262 1.3:+7093426 MS.gene051542:CDS
TATAAGAGCAACAACAGCAG+TGG 0.605251 1.3:-7094211 None:intergenic
GACGATTGTCATAATAAGAG+TGG 0.608491 1.3:+7093195 MS.gene051542:CDS
TGTATCCAGATTTAAGCTGA+TGG 0.613837 1.3:+7093110 MS.gene051542:CDS
ATGGAACTACCCTCGGAAAG+GGG 0.615281 1.3:+7097056 MS.gene051542:CDS
CTACCCTCTCCCCTTTCCGA+GGG 0.624958 1.3:-7097065 None:intergenic
CAACATCACTGTGATTGTTG+TGG 0.626755 1.3:+7097154 MS.gene051542:CDS
AAACGAAGAGGTGTGTGACC+TGG 0.628768 1.3:+7096995 MS.gene051542:CDS
ATCATCATCCTCACTTTCTG+GGG 0.630351 1.3:-7093346 None:intergenic
CAACCGGTATTGGAAAAGGA+AGG 0.631534 1.3:+7093255 MS.gene051542:CDS
GGAAAAGTGATACAGTGGAA+TGG 0.631701 1.3:+7094455 MS.gene051542:CDS
ACACTCGTTCCCTCTTCCTG+AGG 0.634544 1.3:-7093675 None:intergenic
ACGATTAGCCCCAGAAAGTG+AGG 0.636780 1.3:+7093338 MS.gene051542:CDS
AGTTTACCTGAGAGCCACCA+TGG 0.637746 1.3:-7093911 None:intergenic
TGGGGATTCATATCACTATG+TGG 0.637964 1.3:+7093741 MS.gene051542:CDS
GGAGTCTATGATGGCCATGG+TGG 0.638051 1.3:+7093897 MS.gene051542:CDS
GTTGTTGCGCCAGAAACTGT+TGG 0.640473 1.3:+7094186 MS.gene051542:CDS
CCGGAGGAAAAGTGATACAG+TGG 0.650164 1.3:+7094450 MS.gene051542:CDS
GGGAGAGGGTAGTGATCCTG+CGG 0.656471 1.3:+7097076 MS.gene051542:CDS
AAGGAAAGTCTAATTGATGG+AGG 0.660659 1.3:+7094069 MS.gene051542:CDS
GCAAGAATTGAAGCAGCCGG+AGG 0.679321 1.3:+7094434 MS.gene051542:CDS
TATGAATGAACCCCTTGCTG+TGG 0.687921 1.3:+7093584 MS.gene051542:CDS
ATCCAGATTTAAGCTGATGG+CGG 0.688242 1.3:+7093113 MS.gene051542:CDS
CATCCATATTGCATTGACCG+AGG 0.698699 1.3:+7094032 MS.gene051542:CDS
CAAGAACACCAAATACACGA+TGG 0.734296 1.3:-7094478 None:intergenic
GGATGTGATGACAAACGAAG+AGG 0.744441 1.3:+7096983 MS.gene051542:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GTTTAATTTTTTTATTTGAA+TGG + chr1.3:7096686-7096705 MS.gene051542:intron 10.0%
!! AAGTTTATTCCATAAATTAT+AGG + chr1.3:7095190-7095209 MS.gene051542:intron 15.0%
!! TAAAAAAATTAGGATCAAAA+TGG - chr1.3:7096111-7096130 None:intergenic 15.0%
!! TCTAAAAACTAAAAATAAAG+TGG - chr1.3:7096239-7096258 None:intergenic 15.0%
!!! AACTAAAACACTTTTATTTT+GGG - chr1.3:7093307-7093326 None:intergenic 15.0%
!!! ACACTTTTAAGATAAAATTT+AGG + chr1.3:7095482-7095501 MS.gene051542:intron 15.0%
!!! ATGATAAATTTTACTTCATT+TGG + chr1.3:7094533-7094552 MS.gene051542:intron 15.0%
!!! TGTTTTTCCTTTTAATTAAT+TGG + chr1.3:7095946-7095965 MS.gene051542:intron 15.0%
!! ACGAAATCCAATTAATTAAA+AGG - chr1.3:7095956-7095975 None:intergenic 20.0%
!! ATAAACCAGTACAAAATAAT+TGG + chr1.3:7095249-7095268 MS.gene051542:intron 20.0%
!! ATAAGTTAGCAGTATTAATT+AGG - chr1.3:7094674-7094693 None:intergenic 20.0%
!! ATCATATGTGTACTAATTTA+AGG + chr1.3:7095877-7095896 MS.gene051542:intron 20.0%
!! CATAATAAATAAGCATGTAT+CGG - chr1.3:7094915-7094934 None:intergenic 20.0%
!! CATACAAACAAATGATAATT+TGG + chr1.3:7094724-7094743 MS.gene051542:intron 20.0%
!! GTACTTTATTAAGAAATGAA+TGG + chr1.3:7095909-7095928 MS.gene051542:intron 20.0%
!! TAAGTTAGCAGTATTAATTA+GGG - chr1.3:7094673-7094692 None:intergenic 20.0%
!! TAATTGTGTTGTGTTTATAA+AGG + chr1.3:7096819-7096838 MS.gene051542:intron 20.0%
!! TCATATGTGTACTAATTTAA+GGG + chr1.3:7095878-7095897 MS.gene051542:intron 20.0%
!!! AGAGTTGTTTTTCTTTTTTT+AGG + chr1.3:7095804-7095823 MS.gene051542:intron 20.0%
!!! CAACTAAAACACTTTTATTT+TGG - chr1.3:7093308-7093327 None:intergenic 20.0%
!!! GAGTTGTTTTTCTTTTTTTA+GGG + chr1.3:7095805-7095824 MS.gene051542:intron 20.0%
!!! TATCTTAATATTTCTGATGA+TGG + chr1.3:7096501-7096520 MS.gene051542:intron 20.0%
!!! TATTAATTAGGGGTATATTT+AGG - chr1.3:7094662-7094681 None:intergenic 20.0%
!!! TTTCAAGCTCTAAAAAAATT+AGG - chr1.3:7096121-7096140 None:intergenic 20.0%
! AAATGTGAAAAAAGCAAAAG+GGG + chr1.3:7094800-7094819 MS.gene051542:intron 25.0%
! AAGTTAGCAGTATTAATTAG+GGG - chr1.3:7094672-7094691 None:intergenic 25.0%
! AATTGGATTATATCCCATTA+TGG + chr1.3:7093721-7093740 MS.gene051542:CDS 25.0%
! AGAAATGTGAAAAAAGCAAA+AGG + chr1.3:7094798-7094817 MS.gene051542:intron 25.0%
! ATGCATCTAGTAATTTGAAA+AGG - chr1.3:7094626-7094645 None:intergenic 25.0%
! ATTGGATTATATCCCATTAT+GGG + chr1.3:7093722-7093741 MS.gene051542:CDS 25.0%
! CACATATGATTGATATAAAC+TGG - chr1.3:7095867-7095886 None:intergenic 25.0%
! CATATTATAGTTGCAAATTG+TGG + chr1.3:7094243-7094262 MS.gene051542:CDS 25.0%
! CTTATTAATCATCCTTGAAT+GGG + chr1.3:7096071-7096090 MS.gene051542:intron 25.0%
! GAAATGTGAAAAAAGCAAAA+GGG + chr1.3:7094799-7094818 MS.gene051542:intron 25.0%
! GAATGGAAAATGCAAAAAAT+AGG + chr1.3:7096703-7096722 MS.gene051542:intron 25.0%
! GATGATTAATAAGCAGTAAA+AGG - chr1.3:7096064-7096083 None:intergenic 25.0%
! TAAAATTACAAACTCCAACA+CGG + chr1.3:7094848-7094867 MS.gene051542:intron 25.0%
! TAATCTTTCCTCACAAAATT+CGG + chr1.3:7095283-7095302 MS.gene051542:intron 25.0%
! TGCATCTAGTAATTTGAAAA+GGG - chr1.3:7094625-7094644 None:intergenic 25.0%
! TTATTAATCATCCTTGAATG+GGG + chr1.3:7096072-7096091 MS.gene051542:intron 25.0%
! TTTCACCAAATGTTTCTTAA+AGG + chr1.3:7094128-7094147 MS.gene051542:CDS 25.0%
!! AAAAACTTTTTGGACATTGA+GGG - chr1.3:7095023-7095042 None:intergenic 25.0%
!! ATCAACCTTTAAGAAACATT+TGG - chr1.3:7094136-7094155 None:intergenic 25.0%
!! CAATGTCCAAAAAGTTTTTA+AGG + chr1.3:7095024-7095043 MS.gene051542:intron 25.0%
!! CTTTTAGTCAGTTATTTAGA+GGG + chr1.3:7095634-7095653 MS.gene051542:intron 25.0%
!! GAGCTTAATTTTTCTCATTT+AGG + chr1.3:7093987-7094006 MS.gene051542:intron 25.0%
!! TAAAAACTTTTTGGACATTG+AGG - chr1.3:7095024-7095043 None:intergenic 25.0%
!! TCTTTTAGTCAGTTATTTAG+AGG + chr1.3:7095633-7095652 MS.gene051542:intron 25.0%
!!! AATTTAGTTTGATCATTCCT+CGG + chr1.3:7096345-7096364 MS.gene051542:intron 25.0%
!!! GATATCTTTAGTTCTAAAGA+GGG + chr1.3:7095701-7095720 MS.gene051542:intron 25.0%
!!! GGACAATTTTTTAGTCAAAT+GGG - chr1.3:7094590-7094609 None:intergenic 25.0%
AAACACAACACAATTACTGT+GGG - chr1.3:7096815-7096834 None:intergenic 30.0%
AAATTATAGGTGTAACAGGT+TGG + chr1.3:7095203-7095222 MS.gene051542:intron 30.0%
AACAAAGAGAGAGAAAAAGT+TGG + chr1.3:7095055-7095074 MS.gene051542:intron 30.0%
AAGGATACTGTATGAAAAGA+GGG - chr1.3:7096422-7096441 None:intergenic 30.0%
AATCAAATACACAAGCAAGT+TGG - chr1.3:7096786-7096805 None:intergenic 30.0%
AATCCAATTCAAAAACACTC+CGG - chr1.3:7093710-7093729 None:intergenic 30.0%
AATGTGAAAAAAGCAAAAGG+GGG + chr1.3:7094801-7094820 MS.gene051542:intron 30.0%
ACACACTGTAAATGATTCAA+AGG + chr1.3:7095666-7095685 MS.gene051542:intron 30.0%
ACTTGATTCTCTTAGAACTA+CGG - chr1.3:7096663-7096682 None:intergenic 30.0%
ATCATAGACTCCAAAGAAAT+GGG - chr1.3:7093889-7093908 None:intergenic 30.0%
ATTCGTCATTTATGTTCAAC+AGG - chr1.3:7096196-7096215 None:intergenic 30.0%
CAAATGGGTGGTTATATATA+GGG - chr1.3:7094575-7094594 None:intergenic 30.0%
CCAGTACAAAATAATTGGTT+TGG + chr1.3:7095254-7095273 MS.gene051542:intron 30.0%
CCATAAATTATAGGTGTAAC+AGG + chr1.3:7095199-7095218 MS.gene051542:intron 30.0%
CCTGTTACACCTATAATTTA+TGG - chr1.3:7095202-7095221 None:intergenic 30.0%
CTGATAATACTTCAGAAGTT+GGG + chr1.3:7093466-7093485 MS.gene051542:CDS 30.0%
CTTCTTTGGTACAAGAAAAA+CGG + chr1.3:7097032-7097051 MS.gene051542:CDS 30.0%
GAGGAATGATCAAACTAAAT+TGG - chr1.3:7096346-7096365 None:intergenic 30.0%
GATGATTCATTATCATTGGA+AGG + chr1.3:7093363-7093382 MS.gene051542:CDS 30.0%
GCATCTAGTAATTTGAAAAG+GGG - chr1.3:7094624-7094643 None:intergenic 30.0%
GCTTATTAATCATCCTTGAA+TGG + chr1.3:7096070-7096089 MS.gene051542:intron 30.0%
GGATGATGATTCATTATCAT+TGG + chr1.3:7093359-7093378 MS.gene051542:CDS 30.0%
TAAACACAACACAATTACTG+TGG - chr1.3:7096816-7096835 None:intergenic 30.0%
TACACAGGATTGATATAAAC+TGG - chr1.3:7095761-7095780 None:intergenic 30.0%
TATTACAAAAGTCACTCAAC+CGG + chr1.3:7093239-7093258 MS.gene051542:CDS 30.0%
TCAAATGGGTGGTTATATAT+AGG - chr1.3:7094576-7094595 None:intergenic 30.0%
TCAATCCTGTGTACTAATTT+CGG + chr1.3:7095768-7095787 MS.gene051542:intron 30.0%
TCATAATAAGAGTGGCAATT+TGG + chr1.3:7093203-7093222 MS.gene051542:CDS 30.0%
TCTAGAAGCAACTTACTTTA+TGG - chr1.3:7094323-7094342 None:intergenic 30.0%
TCTGATAATACTTCAGAAGT+TGG + chr1.3:7093465-7093484 MS.gene051542:CDS 30.0%
TGAAAAGGGGTTTGTATTTA+GGG - chr1.3:7094611-7094630 None:intergenic 30.0%
TTCTTGCATATTCATCTTCT+CGG - chr1.3:7094421-7094440 None:intergenic 30.0%
TTGAAAAGGGGTTTGTATTT+AGG - chr1.3:7094612-7094631 None:intergenic 30.0%
TTGGATTATATCCCATTATG+GGG + chr1.3:7093723-7093742 MS.gene051542:CDS 30.0%
! AAAACTTTTTGGACATTGAG+GGG - chr1.3:7095022-7095041 None:intergenic 30.0%
! ACTGATTCAGAATTTCAGAT+GGG - chr1.3:7096028-7096047 None:intergenic 30.0%
! ATAACCTATTTTCCCTTTGT+AGG + chr1.3:7096142-7096161 MS.gene051542:intron 30.0%
! ATCTGAAATTCTGAATCAGT+GGG + chr1.3:7096028-7096047 MS.gene051542:intron 30.0%
! CCAAGATTTTCACATTAGTA+GGG - chr1.3:7094883-7094902 None:intergenic 30.0%
! GACACACCTTAAAAACTTTT+TGG - chr1.3:7095033-7095052 None:intergenic 30.0%
! TCCAAGATTTTCACATTAGT+AGG - chr1.3:7094884-7094903 None:intergenic 30.0%
! TTTGAAACCGTCAATTATTC+CGG + chr1.3:7096890-7096909 MS.gene051542:CDS 30.0%
! TTTTCTATGTCTATCGAACA+TGG - chr1.3:7093495-7093514 None:intergenic 30.0%
!! ATATTTGTTTTCCCCATTCA+AGG - chr1.3:7096086-7096105 None:intergenic 30.0%
!! CCAAACCAATTATTTTGTAC+TGG - chr1.3:7095257-7095276 None:intergenic 30.0%
!! CGATATCTTTAGTTCTAAAG+AGG + chr1.3:7095700-7095719 MS.gene051542:intron 30.0%
!! TAGAGGTATCTTCTATAATC+TGG + chr1.3:7095734-7095753 MS.gene051542:intron 30.0%
!!! AAACTTTTTTCCACTGATCT+TGG - chr1.3:7094110-7094129 None:intergenic 30.0%
!!! CAATTTTTTAGTCAAATGGG+TGG - chr1.3:7094587-7094606 None:intergenic 30.0%
!!! GGGACAATTTTTTAGTCAAA+TGG - chr1.3:7094591-7094610 None:intergenic 30.0%
AACCACTAGCAAATTCAGAA+TGG - chr1.3:7096584-7096603 None:intergenic 35.0%
AAGGAAAGTCTAATTGATGG+AGG + chr1.3:7094069-7094088 MS.gene051542:CDS 35.0%
AATCATCATCCTCACTTTCT+GGG - chr1.3:7093350-7093369 None:intergenic 35.0%
AATGCCTACAAAGGGAAAAT+AGG - chr1.3:7096149-7096168 None:intergenic 35.0%
ACAAAGATACAAACACCTCT+AGG - chr1.3:7095606-7095625 None:intergenic 35.0%
AGAAAGTGAGAAGAGAGAAA+AGG - chr1.3:7095083-7095102 None:intergenic 35.0%
AGATAAAGACATGTGTCCTA+CGG + chr1.3:7095534-7095553 MS.gene051542:intron 35.0%
AGCAAAAGGGGGTTATATAT+AGG + chr1.3:7094812-7094831 MS.gene051542:intron 35.0%
AGGATACTGTATGAAAAGAG+GGG - chr1.3:7096421-7096440 None:intergenic 35.0%
AGTGAAAACAGTAGTTTAGG+TGG + chr1.3:7093426-7093445 MS.gene051542:CDS 35.0%
AGTGATATGAATCCCCATAA+TGG - chr1.3:7093738-7093757 None:intergenic 35.0%
ATCACCAATTAGCATCTGAA+TGG - chr1.3:7093823-7093842 None:intergenic 35.0%
ATGAATTGAACTTCTGGATC+CGG - chr1.3:7096912-7096931 None:intergenic 35.0%
ATTCCCATTCAGATGCTAAT+TGG + chr1.3:7093816-7093835 MS.gene051542:CDS 35.0%
ATTGTCCAATTCTGTAGCTA+AGG + chr1.3:7093146-7093165 MS.gene051542:CDS 35.0%
CATCATAGACTCCAAAGAAA+TGG - chr1.3:7093890-7093909 None:intergenic 35.0%
CCAAATCGATGAAGAAACAT+TGG + chr1.3:7095312-7095331 MS.gene051542:intron 35.0%
CCCTACTAATGTGAAAATCT+TGG + chr1.3:7094880-7094899 MS.gene051542:intron 35.0%
CGAAAAATGTTTAACGCAGA+AGG - chr1.3:7096441-7096460 None:intergenic 35.0%
CGGAAAAGAACATTTGTCAT+TGG + chr1.3:7096551-7096570 MS.gene051542:intron 35.0%
CTCGAAAACGTATACTTCTT+TGG + chr1.3:7097018-7097037 MS.gene051542:CDS 35.0%
CTTGACAAGTTCTATTTCCT+CGG - chr1.3:7094052-7094071 None:intergenic 35.0%
CTTGCAATGTCAAGATCTAT+TGG + chr1.3:7094497-7094516 MS.gene051542:CDS 35.0%
GAAAGTGAGAAGAGAGAAAA+GGG - chr1.3:7095082-7095101 None:intergenic 35.0%
GAAGGATACTGTATGAAAAG+AGG - chr1.3:7096423-7096442 None:intergenic 35.0%
GACGATTGTCATAATAAGAG+TGG + chr1.3:7093195-7093214 MS.gene051542:CDS 35.0%
GCAAAAGGGGGTTATATATA+GGG + chr1.3:7094813-7094832 MS.gene051542:intron 35.0%
GGCAATTTGGATGTTGAAAT+CGG + chr1.3:7093216-7093235 MS.gene051542:CDS 35.0%
GTCAAGGAAAGTCTAATTGA+TGG + chr1.3:7094066-7094085 MS.gene051542:CDS 35.0%
GTCAGTGAAAACAGTAGTTT+AGG + chr1.3:7093423-7093442 MS.gene051542:CDS 35.0%
GTGATATGAATCCCCATAAT+GGG - chr1.3:7093737-7093756 None:intergenic 35.0%
TCACCAATTAGCATCTGAAT+GGG - chr1.3:7093822-7093841 None:intergenic 35.0%
TCTCCTGAAAATCACATCAA+GGG - chr1.3:7096864-7096883 None:intergenic 35.0%
TGAAAATCACATCAAGGGTA+AGG - chr1.3:7096859-7096878 None:intergenic 35.0%
TGATCATGCTAACTAAGACT+TGG - chr1.3:7095119-7095138 None:intergenic 35.0%
TGGGAACATAAAGTGATTTG+CGG - chr1.3:7096009-7096028 None:intergenic 35.0%
TGGGATATCATATCCATCAA+AGG - chr1.3:7093288-7093307 None:intergenic 35.0%
TGTATCCAGATTTAAGCTGA+TGG + chr1.3:7093110-7093129 MS.gene051542:CDS 35.0%
TTGCTCTTATACTTTCGTTG+AGG - chr1.3:7097188-7097207 None:intergenic 35.0%
! AGAGGATGAATGTCTCATTT+TGG + chr1.3:7096944-7096963 MS.gene051542:CDS 35.0%
! ATGCTAACTAAGACTTGGTT+TGG - chr1.3:7095114-7095133 None:intergenic 35.0%
! ATGGAATAAACCGGTGTTTT+AGG + chr1.3:7093853-7093872 MS.gene051542:CDS 35.0%
! ATGGGAATTTCTAAAAACCG+AGG - chr1.3:7093804-7093823 None:intergenic 35.0%
! CATCTGAAATTCTGAATCAG+TGG + chr1.3:7096027-7096046 MS.gene051542:intron 35.0%
! CCAATGTTTCTTCATCGATT+TGG - chr1.3:7095315-7095334 None:intergenic 35.0%
! GAGGTGTTTGTATCTTTGTT+TGG + chr1.3:7095607-7095626 MS.gene051542:intron 35.0%
! GGTTTAATCCGAATTTTGTG+AGG - chr1.3:7095294-7095313 None:intergenic 35.0%
! GTTGTTGATTACTCAACTTC+TGG + chr1.3:7095840-7095859 MS.gene051542:intron 35.0%
! TCGATGAAGAAACATTGGTT+TGG + chr1.3:7095317-7095336 MS.gene051542:intron 35.0%
! TTACCCTTGATGTGATTTTC+AGG + chr1.3:7096858-7096877 MS.gene051542:intron 35.0%
!! CACTGATTCAGAATTTCAGA+TGG - chr1.3:7096029-7096048 None:intergenic 35.0%
!! CATTTCTTTGGAGTCTATGA+TGG + chr1.3:7093888-7093907 MS.gene051542:CDS 35.0%
!! GAAGAAACATTGGTTTGGTT+TGG + chr1.3:7095322-7095341 MS.gene051542:intron 35.0%
!! TTAAAGGTTGATGCAGAAGT+TGG + chr1.3:7094144-7094163 MS.gene051542:CDS 35.0%
!!! AAGAGGGATTTTGAGATTAG+AGG + chr1.3:7095717-7095736 MS.gene051542:intron 35.0%
AAAAGTCACTCAACCGGTAT+TGG + chr1.3:7093245-7093264 MS.gene051542:CDS 40.0%
AAGGGGGTTATATATAGGGA+CGG + chr1.3:7094817-7094836 MS.gene051542:intron 40.0%
AGACCAAAGATCATTGCAGA+AGG + chr1.3:7096289-7096308 MS.gene051542:intron 40.0%
AGCTAAGGTTTCCAACGAAA+CGG + chr1.3:7093161-7093180 MS.gene051542:CDS 40.0%
ATCATCATCCTCACTTTCTG+GGG - chr1.3:7093349-7093368 None:intergenic 40.0%
ATCCAGATTTAAGCTGATGG+CGG + chr1.3:7093113-7093132 MS.gene051542:CDS 40.0%
ATTGATGGAGGTCTCAAAGA+TGG + chr1.3:7094081-7094100 MS.gene051542:CDS 40.0%
CAACATCACTGTGATTGTTG+TGG + chr1.3:7097154-7097173 MS.gene051542:CDS 40.0%
CAAGAACACCAAATACACGA+TGG - chr1.3:7094481-7094500 None:intergenic 40.0%
CCAAAGAAATGGGTCATTTG+CGG - chr1.3:7093879-7093898 None:intergenic 40.0%
CGAGGAAATAGAACTTGTCA+AGG + chr1.3:7094050-7094069 MS.gene051542:CDS 40.0%
CGAGGAATGAATTGAACTTC+TGG - chr1.3:7096918-7096937 None:intergenic 40.0%
CTGATTCAACTCCAATCTCT+GGG - chr1.3:7093623-7093642 None:intergenic 40.0%
GAATCATCATCCTCACTTTC+TGG - chr1.3:7093351-7093370 None:intergenic 40.0%
GACTTCCGAAATTAGTACAC+AGG - chr1.3:7095776-7095795 None:intergenic 40.0%
GAGTACCTGATGGAATAAAC+CGG + chr1.3:7093844-7093863 MS.gene051542:CDS 40.0%
GATAAAGACATGTGTCCTAC+GGG + chr1.3:7095535-7095554 MS.gene051542:intron 40.0%
GCATATTCATCTTCTCGGTT+CGG - chr1.3:7094416-7094435 None:intergenic 40.0%
GGAAAAGTGATACAGTGGAA+TGG + chr1.3:7094455-7094474 MS.gene051542:CDS 40.0%
GGAAACCTTAGCTACAGAAT+TGG - chr1.3:7093154-7093173 None:intergenic 40.0%
GGATACTGTATGAAAAGAGG+GGG - chr1.3:7096420-7096439 None:intergenic 40.0%
GTCTCCTGAAAATCACATCA+AGG - chr1.3:7096865-7096884 None:intergenic 40.0%
TAATTTCCCTTAGCAGCCTT+TGG - chr1.3:7096378-7096397 None:intergenic 40.0%
TATAAGAGCAACAACAGCAG+TGG - chr1.3:7094214-7094233 None:intergenic 40.0%
TATGCAAGAATTGAAGCAGC+CGG + chr1.3:7094431-7094450 MS.gene051542:CDS 40.0%
TCGTGAATCTGTGAATGTGA+GGG + chr1.3:7095972-7095991 MS.gene051542:intron 40.0%
TCTGATTCAACTCCAATCTC+TGG - chr1.3:7093624-7093643 None:intergenic 40.0%
TCTGGATCCGGAATAATTGA+CGG - chr1.3:7096900-7096919 None:intergenic 40.0%
TGGGGATTCATATCACTATG+TGG + chr1.3:7093741-7093760 MS.gene051542:CDS 40.0%
TGGGTGGTTATATATAGGGA+CGG - chr1.3:7094571-7094590 None:intergenic 40.0%
TGGTTATATATAGGGACGGA+GGG - chr1.3:7094567-7094586 None:intergenic 40.0%
TGTTGTCTTTGCTTCCTTTC+TGG - chr1.3:7097139-7097158 None:intergenic 40.0%
TTCGTGAATCTGTGAATGTG+AGG + chr1.3:7095971-7095990 MS.gene051542:intron 40.0%
TTCTTTGCCACGACAAAGAA+CGG - chr1.3:7094280-7094299 None:intergenic 40.0%
TTGCCTTCTGCAATGATCTT+TGG - chr1.3:7096295-7096314 None:intergenic 40.0%
TTGGTACAAGAAAAACGGCA+TGG + chr1.3:7097037-7097056 MS.gene051542:CDS 40.0%
TTTCCTCGGTCAATGCAATA+TGG - chr1.3:7094038-7094057 None:intergenic 40.0%
TTTGGCTAGTGATGGTCTAT+GGG + chr1.3:7096962-7096981 MS.gene051542:CDS 40.0%
! ACAAACACCTCTAGGAGATT+AGG - chr1.3:7095598-7095617 None:intergenic 40.0%
! GGAACATAAAGTGATTTGCG+GGG - chr1.3:7096007-7096026 None:intergenic 40.0%
! GGGAACATAAAGTGATTTGC+GGG - chr1.3:7096008-7096027 None:intergenic 40.0%
! TCTCCTTCCTTTTCCAATAC+CGG - chr1.3:7093261-7093280 None:intergenic 40.0%
!! AAACACCGGTTTATTCCATC+AGG - chr1.3:7093852-7093871 None:intergenic 40.0%
!! ATAGGTGTAACAGGTTGGTT+TGG + chr1.3:7095208-7095227 MS.gene051542:intron 40.0%
!! CACCATTCTGAATTTGCTAG+TGG + chr1.3:7096579-7096598 MS.gene051542:intron 40.0%
!! TGTAACAGGTTGGTTTGGTT+CGG + chr1.3:7095213-7095232 MS.gene051542:intron 40.0%
!! TGTCCGGAGTGTTTTTGAAT+TGG + chr1.3:7093704-7093723 MS.gene051542:CDS 40.0%
!! TTTTGGCTAGTGATGGTCTA+TGG + chr1.3:7096961-7096980 MS.gene051542:CDS 40.0%
!!! TGTCTCATTTTGGCTAGTGA+TGG + chr1.3:7096954-7096973 MS.gene051542:CDS 40.0%
AAGATGGTTGCCAAGATCAG+TGG + chr1.3:7094097-7094116 MS.gene051542:CDS 45.0%
AAGATTCACTGCCACAGCAA+GGG - chr1.3:7093598-7093617 None:intergenic 45.0%
ACCGAGAAGAATGCCTACAA+AGG - chr1.3:7096158-7096177 None:intergenic 45.0%
AGAACCAATGGCGTTATCAG+TGG + chr1.3:7094296-7094315 MS.gene051542:CDS 45.0%
AGACATGCCTAATCTCCTAG+AGG + chr1.3:7095588-7095607 MS.gene051542:intron 45.0%
AGCTGATGAGCAACTGTAGA+AGG - chr1.3:7093654-7093673 None:intergenic 45.0%
ATCCGCCATCAGCTTAAATC+TGG - chr1.3:7093118-7093137 None:intergenic 45.0%
ATGTGGACGAAGACCAGAAA+TGG + chr1.3:7093758-7093777 MS.gene051542:CDS 45.0%
ATTCATTCCTCGTGCGAAAG+AGG + chr1.3:7096926-7096945 MS.gene051542:CDS 45.0%
CAACGAAACGGTTGTAGGTT+CGG + chr1.3:7093173-7093192 MS.gene051542:CDS 45.0%
CCCTTTGTAGGCATTCTTCT+CGG + chr1.3:7096154-7096173 MS.gene051542:intron 45.0%
CCGAGAAGAATGCCTACAAA+GGG - chr1.3:7096157-7096176 None:intergenic 45.0%
CCGCAAATGACCCATTTCTT+TGG + chr1.3:7093876-7093895 MS.gene051542:CDS 45.0%
CGTGAATCTGTGAATGTGAG+GGG + chr1.3:7095973-7095992 MS.gene051542:intron 45.0%
GAACGAGTGTAACAGTTGTC+CGG + chr1.3:7093688-7093707 MS.gene051542:CDS 45.0%
GAGCAACTGTAGAAGGCTTT+AGG - chr1.3:7093647-7093666 None:intergenic 45.0%
GCACAACGTTGAGAGTCTTT+CGG + chr1.3:7096531-7096550 MS.gene051542:intron 45.0%
GCGGGGCAATATTGAGATTT+GGG + chr1.3:7096626-7096645 MS.gene051542:intron 45.0%
GGAAGGAGAAAGTCCTTTGA+TGG + chr1.3:7093272-7093291 MS.gene051542:CDS 45.0%
GGATGTGATGACAAACGAAG+AGG + chr1.3:7096983-7097002 MS.gene051542:CDS 45.0%
GGGTTATATATAGGGACGGA+GGG + chr1.3:7094821-7094840 MS.gene051542:intron 45.0%
GTACCTTCTACTCGTAGTTG+CGG + chr1.3:7096607-7096626 MS.gene051542:intron 45.0%
GTGAATCTTGACCCAGAGAT+TGG + chr1.3:7093609-7093628 MS.gene051542:CDS 45.0%
GTGGTTATATATAGGGACGG+AGG - chr1.3:7094568-7094587 None:intergenic 45.0%
GTTTCCAACGAAACGGTTGT+AGG + chr1.3:7093168-7093187 MS.gene051542:CDS 45.0%
TACCTTCTACTCGTAGTTGC+GGG + chr1.3:7096608-7096627 MS.gene051542:intron 45.0%
TATGAATGAACCCCTTGCTG+TGG + chr1.3:7093584-7093603 MS.gene051542:CDS 45.0%
TCATTTGCGGCCTAAAACAC+CGG - chr1.3:7093866-7093885 None:intergenic 45.0%
TGCGGGGCAATATTGAGATT+TGG + chr1.3:7096625-7096644 MS.gene051542:intron 45.0%
TGGAATGGCCATCGTGTATT+TGG + chr1.3:7094470-7094489 MS.gene051542:CDS 45.0%
TTGTCGTGGCAAAGAACCAA+TGG + chr1.3:7094284-7094303 MS.gene051542:CDS 45.0%
! ACATAAAGTGATTTGCGGGG+TGG - chr1.3:7096004-7096023 None:intergenic 45.0%
! ATTGGTGATCGAGTACCTGA+TGG + chr1.3:7093834-7093853 MS.gene051542:CDS 45.0%
! CAACCGGTATTGGAAAAGGA+AGG + chr1.3:7093255-7093274 MS.gene051542:CDS 45.0%
! CACTCAACCGGTATTGGAAA+AGG + chr1.3:7093251-7093270 MS.gene051542:CDS 45.0%
! CATCCATATTGCATTGACCG+AGG + chr1.3:7094032-7094051 MS.gene051542:CDS 45.0%
! TTTGGAGTCTATGATGGCCA+TGG + chr1.3:7093894-7093913 MS.gene051542:CDS 45.0%
!! AAGGTTGATGCAGAAGTTGG+AGG + chr1.3:7094147-7094166 MS.gene051542:CDS 45.0%
!! CCACTGTATCACTTTTCCTC+CGG - chr1.3:7094453-7094472 None:intergenic 45.0%
!! GAAGTATACGTTTTCGAGCC+AGG - chr1.3:7097016-7097035 None:intergenic 45.0%
!!! GTTGGTTTGGTTCGGTTTTG+AGG + chr1.3:7095221-7095240 MS.gene051542:intron 45.0%
!!! ATTTTTATACTATTAAAATA+AGG + chr1.3:7095389-7095408 MS.gene051542:intron 5.0%
AAACGGCATGGAACTACCCT+CGG + chr1.3:7097049-7097068 MS.gene051542:CDS 50.0%
ACCTTCTACTCGTAGTTGCG+GGG + chr1.3:7096609-7096628 MS.gene051542:intron 50.0%
ACGCAGTTGCAACTGTTCCT+CGG + chr1.3:7093784-7093803 MS.gene051542:CDS 50.0%
AGATTCACTGCCACAGCAAG+GGG - chr1.3:7093597-7093616 None:intergenic 50.0%
AGTCAGTCCAAAGGCTGCTA+AGG + chr1.3:7096368-7096387 MS.gene051542:intron 50.0%
AGTTTACCTGAGAGCCACCA+TGG - chr1.3:7093914-7093933 None:intergenic 50.0%
ATGGAACTACCCTCGGAAAG+GGG + chr1.3:7097056-7097075 MS.gene051542:CDS 50.0%
ATTCCTCGGAGTCAGTCCAA+AGG + chr1.3:7096359-7096378 MS.gene051542:intron 50.0%
ATTTGACCCCCCCAAATCAG+CGG - chr1.3:7093550-7093569 None:intergenic 50.0%
CAAGATTCACTGCCACAGCA+AGG - chr1.3:7093599-7093618 None:intergenic 50.0%
CATGGAACTACCCTCGGAAA+GGG + chr1.3:7097055-7097074 MS.gene051542:CDS 50.0%
CATTCATCCTCTTTCGCACG+AGG - chr1.3:7096936-7096955 None:intergenic 50.0%
CCGGAGGAAAAGTGATACAG+TGG + chr1.3:7094450-7094469 MS.gene051542:CDS 50.0%
CGAACCTACAACCGTTTCGT+TGG - chr1.3:7093175-7093194 None:intergenic 50.0%
GCAACTGCGTCTTCCATTTC+TGG - chr1.3:7093774-7093793 None:intergenic 50.0%
GGGGTTATATATAGGGACGG+AGG + chr1.3:7094820-7094839 MS.gene051542:intron 50.0%
GTCAGTCCAAAGGCTGCTAA+GGG + chr1.3:7096369-7096388 MS.gene051542:intron 50.0%
GTTGGACACCAAACGTGTGT+CGG + chr1.3:7095559-7095578 MS.gene051542:intron 50.0%
GTTGTTGCGCCAGAAACTGT+TGG + chr1.3:7094186-7094205 MS.gene051542:CDS 50.0%
! AAACGAAGAGGTGTGTGACC+TGG + chr1.3:7096995-7097014 MS.gene051542:CDS 50.0%
! ACGATTAGCCCCAGAAAGTG+AGG + chr1.3:7093338-7093357 MS.gene051542:CDS 50.0%
! GTATGAAAAGAGGGGGCACA+AGG - chr1.3:7096413-7096432 None:intergenic 50.0%
! TGGTCCACTGATAACGCCAT+TGG - chr1.3:7094303-7094322 None:intergenic 50.0%
! TGTTGCTCACACCGCTGATT+TGG + chr1.3:7093536-7093555 MS.gene051542:CDS 50.0%
!! GTTGCTCACACCGCTGATTT+GGG + chr1.3:7093537-7093556 MS.gene051542:CDS 50.0%
!! TTAAGCTGATGGCGGATGCA+GGG + chr1.3:7093121-7093140 MS.gene051542:CDS 50.0%
!! TTGCTCACACCGCTGATTTG+GGG + chr1.3:7093538-7093557 MS.gene051542:CDS 50.0%
!! TTTAAGCTGATGGCGGATGC+AGG + chr1.3:7093120-7093139 MS.gene051542:CDS 50.0%
ACACTCGTTCCCTCTTCCTG+AGG - chr1.3:7093678-7093697 None:intergenic 55.0%
AGTTGCTCATCAGCTGCCTC+AGG + chr1.3:7093659-7093678 MS.gene051542:CDS 55.0%
CATCAGCTGCCTCAGGAAGA+GGG + chr1.3:7093666-7093685 MS.gene051542:CDS 55.0%
CTCTGTGTCCGACACACGTT+TGG - chr1.3:7095570-7095589 None:intergenic 55.0%
GACATGTGTCCTACGGGTGT+TGG + chr1.3:7095541-7095560 MS.gene051542:intron 55.0%
GCAAGAATTGAAGCAGCCGG+AGG + chr1.3:7094434-7094453 MS.gene051542:CDS 55.0%
GCAGTGGAGCCAACAGTTTC+TGG - chr1.3:7094198-7094217 None:intergenic 55.0%
GCATGGAACTACCCTCGGAA+AGG + chr1.3:7097054-7097073 MS.gene051542:CDS 55.0%
GGAGTCTATGATGGCCATGG+TGG + chr1.3:7093897-7093916 MS.gene051542:CDS 55.0%
TAGGGTCAACGTGTCCGTGT+TGG - chr1.3:7094865-7094884 None:intergenic 55.0%
TCATCAGCTGCCTCAGGAAG+AGG + chr1.3:7093665-7093684 MS.gene051542:CDS 55.0%
TCGAATCGCGCTCTCCAGAA+AGG + chr1.3:7097122-7097141 MS.gene051542:CDS 55.0%
TCGAGAGCCGTTCTTTGTCG+TGG + chr1.3:7094270-7094289 MS.gene051542:CDS 55.0%
!! GTTTGGTGTCCAACACCCGT+AGG - chr1.3:7095553-7095572 None:intergenic 55.0%
!! TGCTCACACCGCTGATTTGG+GGG + chr1.3:7093539-7093558 MS.gene051542:CDS 55.0%
ACTACCCTCGGAAAGGGGAG+AGG + chr1.3:7097061-7097080 MS.gene051542:CDS 60.0%
ACTACCCTCTCCCCTTTCCG+AGG - chr1.3:7097069-7097088 None:intergenic 60.0%
CTACCCTCGGAAAGGGGAGA+GGG + chr1.3:7097062-7097081 MS.gene051542:CDS 60.0%
CTACCCTCTCCCCTTTCCGA+GGG - chr1.3:7097068-7097087 None:intergenic 60.0%
GCCCCGCAACTACGAGTAGA+AGG - chr1.3:7096613-7096632 None:intergenic 60.0%
GGGAGAGGGTAGTGATCCTG+CGG + chr1.3:7097076-7097095 MS.gene051542:CDS 60.0%
TGATGGCCATGGTGGCTCTC+AGG + chr1.3:7093905-7093924 MS.gene051542:CDS 60.0%
! CAGCCTTTGGACTGACTCCG+AGG - chr1.3:7096365-7096384 None:intergenic 60.0%
!! CTCACACCGCTGATTTGGGG+GGG + chr1.3:7093541-7093560 MS.gene051542:CDS 60.0%
!! GCTCACACCGCTGATTTGGG+GGG + chr1.3:7093540-7093559 MS.gene051542:CDS 60.0%


Chromosome Type Strat End Strand Name
chr1.3 gene 7093105 7097214 7093105 ID=MS.gene051542
chr1.3 mRNA 7093105 7097214 7093105 ID=MS.gene051542.t1;Parent=MS.gene051542
chr1.3 exon 7093105 7093926 7093105 ID=MS.gene051542.t1.exon1;Parent=MS.gene051542.t1
chr1.3 CDS 7093105 7093926 7093105 ID=cds.MS.gene051542.t1;Parent=MS.gene051542.t1
chr1.3 exon 7094009 7094326 7094009 ID=MS.gene051542.t1.exon2;Parent=MS.gene051542.t1
chr1.3 CDS 7094009 7094326 7094009 ID=cds.MS.gene051542.t1;Parent=MS.gene051542.t1
chr1.3 exon 7094413 7094518 7094413 ID=MS.gene051542.t1.exon3;Parent=MS.gene051542.t1
chr1.3 CDS 7094413 7094518 7094413 ID=cds.MS.gene051542.t1;Parent=MS.gene051542.t1
chr1.3 exon 7096880 7097214 7096880 ID=MS.gene051542.t1.exon4;Parent=MS.gene051542.t1
chr1.3 CDS 7096880 7097214 7096880 ID=cds.MS.gene051542.t1;Parent=MS.gene051542.t1
Gene Sequence

>MS.gene051542

ATGGATGTATCCAGATTTAAGCTGATGGCGGATGCAGGGTCATTGTCCAATTCTGTAGCTAAGGTTTCCAACGAAACGGTTGTAGGTTCGGACGATTGTCATAATAAGAGTGGCAATTTGGATGTTGAAATCGGTATTACAAAAGTCACTCAACCGGTATTGGAAAAGGAAGGAGAAAGTCCTTTGATGGATATGATATCCCAAAATAAAAGTGTTTTAGTTGCTAGTGATGTACGATTAGCCCCAGAAAGTGAGGATGATGATTCATTATCATTGGAAGGTGAACAATTTATTGATAGCTCATGTTCTCTATCAGTTGTCAGTGAAAACAGTAGTTTAGGTGGAGAAGAGTTCATTGCTTCTGATAATACTTCAGAAGTTGGGACACCATGTTCGATAGACATAGAAAAGATCGTCAGTTCTGTCAATATTGTTGCTCACACCGCTGATTTGGGGGGGTCAAATGTTGACACAGATATTATGAATGAACCCCTTGCTGTGGCAGTGAATCTTGACCCAGAGATTGGAGTTGAATCAGACCTAAAGCCTTCTACAGTTGCTCATCAGCTGCCTCAGGAAGAGGGAACGAGTGTAACAGTTGTCCGGAGTGTTTTTGAATTGGATTATATCCCATTATGGGGATTCATATCACTATGTGGACGAAGACCAGAAATGGAAGACGCAGTTGCAACTGTTCCTCGGTTTTTAGAAATTCCCATTCAGATGCTAATTGGTGATCGAGTACCTGATGGAATAAACCGGTGTTTTAGGCCGCAAATGACCCATTTCTTTGGAGTCTATGATGGCCATGGTGGCTCTCAGGTAAACTTTAGTTATTACATGTCTGTTGATTTTAGCTTTATCTGAATAAACTCTCGCTTAGAGCTTAATTTTTCTCATTTAGGTTGCAAATTATTGTCGCGAACGCATCCATATTGCATTGACCGAGGAAATAGAACTTGTCAAGGAAAGTCTAATTGATGGAGGTCTCAAAGATGGTTGCCAAGATCAGTGGAAAAAAGTTTTCACCAAATGTTTCTTAAAGGTTGATGCAGAAGTTGGAGGAACGACTAATGATGAAGTTGTTGCGCCAGAAACTGTTGGCTCCACTGCTGTTGTTGCTCTTATATCTTCATCTCATATTATAGTTGCAAATTGTGGTGATTCGAGAGCCGTTCTTTGTCGTGGCAAAGAACCAATGGCGTTATCAGTGGACCATAAAGTAAGTTGCTTCTAGATATTCGTTTGAATCTTCTTTAAAAGAATTTATCTACTAATTGTTGTTTGAATTTTTTTTATATATGCTAGCCGAACCGAGAAGATGAATATGCAAGAATTGAAGCAGCCGGAGGAAAAGTGATACAGTGGAATGGCCATCGTGTATTTGGTGTTCTTGCAATGTCAAGATCTATTGGTATGTTCTTTGTAATGATAAATTTTACTTCATTTGGATTCTACTCCCTCCGTCCCTATATATAACCACCCATTTGACTAAAAAATTGTCCCTAAATACAAACCCCTTTTCAAATTACTAGATGCATTTATTAATTTATTCCTAAATATACCCCTAATTAATACTGCTAACTTATCTTGAAATATGAAAAGTCAAATTTAACACACATACAAACAAATGATAATTTGGTAATATTAACACACAAAATAGACACATTAATTGCATTAACAACTTTTCTTAAGAAATGTGAAAAAAGCAAAAGGGGGTTATATATAGGGACGGAGGGAGTATAAAATTACAAACTCCAACACGGACACGTTGACCCTACTAATGTGAAAATCTTGGATGCTGACACCGATACATGCTTATTTATTATGATTAAAATAAATATGAATATAATTTATAAAATGTGCTTGCATCAAAATTGAGTAAAATGTTGTAATCAATTTTTTTGTCTTTAACCCCTCAATGTCCAAAAAGTTTTTAAGGTGTGTCGAAACAAAGAGAGAGAAAAAGTTGGACCCTTTTCTCTCTTCTCACTTTCTTCTTACAACCAAACCAAGTCTTAGTTAGCATGATCACTGAATGAATCTTTTGTTATAGTTTGATCTTTGATTGTCTCTTTTATTTGTAAGTTTATTCCATAAATTATAGGTGTAACAGGTTGGTTTGGTTCGGTTTTGAGGAGAAAATAAACCAGTACAAAATAATTGGTTTGGTTTTTATAATCTTTCCTCACAAAATTCGGATTAAACCAAATCGATGAAGAAACATTGGTTTGGTTTGGATTAAAAATAAACATAAAAAGTAACTTTTATTCGAACATTATAGATTTTTATACTATTAAAATAAGGACATAAACTACAATGTTTTTATTTTTATTATTTTTTTTTATAGAATTGTCATAAATTACATGAACAAAACACACTTTTAAGATAAAATTTAGGTTTAATTTCACTTTTTAGACACTCAACTCAGATAAAGACATGTGTCCTACGGGTGTTGGACACCAAACGTGTGTCGGACACAGAGACATGCCTAATCTCCTAGAGGTGTTTGTATCTTTGTTTGGTATTCTTTTAGTCAGTTATTTAGAGGGTGTGAGATGACACACTGTAAATGATTCAAAGGAGAGATTAGAGCGATATCTTTAGTTCTAAAGAGGGATTTTGAGATTAGAGGTATCTTCTATAATCTGGTCCAGTTTATATCAATCCTGTGTACTAATTTCGGAAGTCTTCTAGTGAGAGTTGTTTTTCTTTTTTTAGGGATTCTAGTGAAAGTTGTTGATTACTCAACTTCTGGTCCAGTTTATATCAATCATATGTGTACTAATTTAAGGGATAGTTGTGTACTTTATTAAGAAATGAATGGTGAGAGTATTTTCATGTTTTTCCTTTTAATTAATTGGATTTCGTGAATCTGTGAATGTGAGGGGAATTGCCACCCCGCAAATCACTTTATGTTCCCATCTGAAATTCTGAATCAGTGGGAATGTCTTTTCCTTTTACTGCTTATTAATCATCCTTGAATGGGGAAAACAAATATTTCCATTTTGATCCTAATTTTTTTAGAGCTTGAAAGATAACCTATTTTCCCTTTGTAGGCATTCTTCTCGGTTTATTGAATATGTATCCTGTTGAACATAAATGACGAATCTTGAACTATAAGATCATCTCCACTTTATTTTTAGTTTTTAGAATACTGCTTCTGTTATGTTTTGTTCAGTTGAGACCAAAGATCATTGCAGAAGGCAATTGAAATGAATAATTTGCATTTAGATGTCCAATTTAGTTTGATCATTCCTCGGAGTCAGTCCAAAGGCTGCTAAGGGAAATTATTTAGTATGATGCCTTGTGCCCCCTCTTTTCATACAGTATCCTTCTGCGTTAAACATTTTTCGTTCTATTCATATGAAAAGAAGATTTGTGTTAAACAATTGCTATCTTAATATTTCTGATGATGGTAACTTTGCACAACGTTGAGAGTCTTTCGGAAAAGAACATTTGTCATTGGATTGTCACCATTCTGAATTTGCTAGTGGTTTTAGTACCTTCTACTCGTAGTTGCGGGGCAATATTGAGATTTGGGTCTTGAGTACACCGTAGTTCTAAGAGAATCAAGTAAAGTTTAATTTTTTTATTTGAATGGAAAATGCAAAAAATAGGCATTGATTTTGTCTGTGCTACAATTTTATTTTATTTTCTAATTCAAAACAATGATGACCAACTTGCTTGTGTATTTGATTGTGAGTCCCACAGTAATTGTGTTGTGTTTATAAAGGATATAACTATTTCTCCTTACCCTTGATGTGATTTTCAGGAGACAGATATTTGAAACCGTCAATTATTCCGGATCCAGAAGTTCAATTCATTCCTCGTGCGAAAGAGGATGAATGTCTCATTTTGGCTAGTGATGGTCTATGGGATGTGATGACAAACGAAGAGGTGTGTGACCTGGCTCGAAAACGTATACTTCTTTGGTACAAGAAAAACGGCATGGAACTACCCTCGGAAAGGGGAGAGGGTAGTGATCCTGCGGCACAAGCAGCAGCAGAGTTGCTATCGAATCGCGCTCTCCAGAAAGGAAGCAAAGACAACATCACTGTGATTGTTGTGGATCTAAAACCTCAACGAAAGTATAAGAGCAAAACATGA
Protein sequence

>MS.gene051542.t1

MDVSRFKLMADAGSLSNSVAKVSNETVVGSDDCHNKSGNLDVEIGITKVTQPVLEKEGESPLMDMISQNKSVLVASDVRLAPESEDDDSLSLEGEQFIDSSCSLSVVSENSSLGGEEFIASDNTSEVGTPCSIDIEKIVSSVNIVAHTADLGGSNVDTDIMNEPLAVAVNLDPEIGVESDLKPSTVAHQLPQEEGTSVTVVRSVFELDYIPLWGFISLCGRRPEMEDAVATVPRFLEIPIQMLIGDRVPDGINRCFRPQMTHFFGVYDGHGGSQVANYCRERIHIALTEEIELVKESLIDGGLKDGCQDQWKKVFTKCFLKVDAEVGGTTNDEVVAPETVGSTAVVALISSSHIIVANCGDSRAVLCRGKEPMALSVDHKPNREDEYARIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLKPSIIPDPEVQFIPRAKEDECLILASDGLWDVMTNEEVCDLARKRILLWYKKNGMELPSERGEGSDPAAQAAAELLSNRALQKGSKDNITVIVVDLKPQRKYKSKT