Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene027058.t1 | XP_003600112.1 | 99.2 | 481 | 4 | 0 | 1 | 481 | 1 | 481 | 2.00E-204 | 721.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene027058.t1 | Q8W117 | 86.6 | 477 | 63 | 1 | 4 | 480 | 3 | 478 | 2.8e-170 | 599.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene027058.t1 | G7IY21 | 99.2 | 481 | 4 | 0 | 1 | 481 | 1 | 481 | 1.5e-204 | 721.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene027058.t1 | MTR_3g052220 | 99.584 | 481 | 2 | 0 | 1 | 481 | 1 | 481 | 0.0 | 1005 |
MS.gene027058.t1 | MTR_4g119620 | 30.455 | 220 | 123 | 6 | 222 | 432 | 86 | 284 | 1.56e-22 | 98.6 |
MS.gene027058.t1 | MTR_4g119620 | 30.583 | 206 | 124 | 5 | 212 | 414 | 118 | 307 | 2.24e-20 | 92.4 |
MS.gene027058.t1 | MTR_4g119620 | 24.893 | 233 | 155 | 5 | 254 | 476 | 17 | 239 | 7.46e-16 | 79.0 |
MS.gene027058.t1 | MTR_1g072140 | 26.070 | 257 | 172 | 5 | 218 | 472 | 31 | 271 | 6.81e-20 | 90.9 |
MS.gene027058.t1 | MTR_1g072140 | 29.534 | 193 | 119 | 4 | 219 | 408 | 116 | 294 | 7.01e-19 | 87.8 |
MS.gene027058.t1 | MTR_1g072140 | 34.940 | 83 | 54 | 0 | 306 | 388 | 26 | 108 | 5.23e-11 | 64.3 |
MS.gene027058.t1 | MTR_3g106080 | 32.298 | 161 | 100 | 2 | 221 | 381 | 468 | 619 | 3.23e-18 | 88.2 |
MS.gene027058.t1 | MTR_3g106080 | 28.313 | 166 | 110 | 3 | 219 | 384 | 424 | 580 | 9.98e-12 | 67.8 |
MS.gene027058.t1 | MTR_2g012630 | 29.508 | 183 | 118 | 3 | 202 | 384 | 48 | 219 | 2.41e-17 | 85.9 |
MS.gene027058.t1 | MTR_2g012630 | 29.508 | 183 | 118 | 3 | 202 | 384 | 48 | 219 | 2.99e-17 | 85.5 |
MS.gene027058.t1 | MTR_6g004040 | 28.652 | 178 | 118 | 2 | 212 | 389 | 57 | 225 | 1.14e-16 | 83.6 |
MS.gene027058.t1 | MTR_8g106790 | 32.919 | 161 | 95 | 4 | 222 | 378 | 71 | 222 | 6.19e-16 | 79.3 |
MS.gene027058.t1 | MTR_4g105700 | 29.630 | 162 | 111 | 2 | 228 | 387 | 462 | 622 | 6.26e-16 | 81.3 |
MS.gene027058.t1 | MTR_1g090827 | 32.353 | 170 | 105 | 3 | 210 | 378 | 4 | 164 | 2.11e-15 | 79.7 |
MS.gene027058.t1 | MTR_4g071130 | 31.765 | 170 | 106 | 3 | 210 | 378 | 4 | 164 | 1.54e-14 | 77.0 |
MS.gene027058.t1 | MTR_3g045130 | 31.138 | 167 | 102 | 5 | 214 | 376 | 353 | 510 | 2.40e-14 | 75.9 |
MS.gene027058.t1 | MTR_7g086360 | 32.540 | 126 | 84 | 1 | 263 | 387 | 54 | 179 | 3.15e-14 | 74.3 |
MS.gene027058.t1 | MTR_7g086360 | 25.000 | 160 | 109 | 3 | 221 | 379 | 105 | 254 | 5.03e-13 | 70.5 |
MS.gene027058.t1 | MTR_5g016350 | 26.457 | 223 | 149 | 7 | 167 | 379 | 365 | 582 | 3.19e-13 | 72.4 |
MS.gene027058.t1 | MTR_5g016350 | 22.727 | 264 | 175 | 8 | 222 | 476 | 302 | 545 | 7.71e-11 | 64.7 |
MS.gene027058.t1 | MTR_5g016350 | 26.457 | 223 | 149 | 7 | 167 | 379 | 301 | 518 | 4.80e-13 | 71.6 |
MS.gene027058.t1 | MTR_5g016350 | 22.727 | 264 | 175 | 8 | 222 | 476 | 238 | 481 | 6.22e-11 | 65.1 |
MS.gene027058.t1 | MTR_3g075400 | 25.417 | 240 | 149 | 7 | 222 | 442 | 275 | 503 | 5.97e-13 | 71.2 |
MS.gene027058.t1 | MTR_2g060520 | 23.284 | 335 | 198 | 12 | 144 | 435 | 36 | 354 | 1.07e-12 | 70.1 |
MS.gene027058.t1 | MTR_4g125710 | 30.159 | 189 | 112 | 5 | 221 | 390 | 109 | 296 | 1.16e-12 | 69.3 |
MS.gene027058.t1 | MTR_1g097140 | 21.502 | 293 | 147 | 7 | 212 | 429 | 121 | 405 | 1.40e-12 | 69.7 |
MS.gene027058.t1 | MTR_5g022690 | 28.571 | 161 | 105 | 4 | 222 | 381 | 329 | 480 | 1.42e-12 | 70.1 |
MS.gene027058.t1 | MTR_5g022690 | 23.874 | 222 | 159 | 4 | 259 | 480 | 274 | 485 | 2.17e-11 | 66.2 |
MS.gene027058.t1 | MTR_1g054300 | 27.368 | 190 | 109 | 4 | 219 | 380 | 255 | 443 | 1.82e-12 | 69.7 |
MS.gene027058.t1 | MTR_1g054300 | 27.876 | 226 | 137 | 7 | 195 | 414 | 100 | 305 | 8.79e-12 | 67.4 |
MS.gene027058.t1 | MTR_1g054300 | 33.929 | 112 | 65 | 2 | 222 | 333 | 378 | 480 | 3.25e-11 | 65.9 |
MS.gene027058.t1 | MTR_4g011950 | 29.787 | 188 | 115 | 7 | 198 | 376 | 77 | 256 | 2.57e-12 | 69.7 |
MS.gene027058.t1 | MTR_2g102277 | 29.255 | 188 | 116 | 7 | 198 | 376 | 77 | 256 | 2.62e-12 | 69.7 |
MS.gene027058.t1 | MTR_2g102277 | 28.646 | 192 | 120 | 4 | 220 | 408 | 63 | 240 | 9.59e-12 | 68.2 |
MS.gene027058.t1 | MTR_2g102277 | 29.255 | 188 | 116 | 7 | 198 | 376 | 77 | 256 | 2.76e-12 | 69.7 |
MS.gene027058.t1 | MTR_2g102277 | 28.646 | 192 | 120 | 4 | 220 | 408 | 63 | 240 | 1.00e-11 | 67.8 |
MS.gene027058.t1 | MTR_5g016370 | 24.786 | 234 | 139 | 8 | 167 | 379 | 377 | 594 | 2.95e-12 | 69.3 |
MS.gene027058.t1 | MTR_4g104380 | 22.422 | 223 | 144 | 7 | 222 | 435 | 280 | 482 | 4.76e-12 | 68.6 |
MS.gene027058.t1 | MTR_4g104380 | 27.108 | 166 | 107 | 4 | 227 | 388 | 328 | 483 | 7.46e-12 | 67.8 |
MS.gene027058.t1 | MTR_2g060520 | 24.576 | 236 | 153 | 8 | 216 | 435 | 8 | 234 | 7.06e-12 | 66.6 |
MS.gene027058.t1 | MTR_8g092620 | 23.701 | 308 | 139 | 9 | 200 | 422 | 1 | 297 | 7.43e-12 | 67.0 |
MS.gene027058.t1 | MTR_8g092620 | 28.169 | 213 | 129 | 8 | 212 | 422 | 100 | 290 | 9.88e-12 | 66.2 |
MS.gene027058.t1 | MTR_1g044720 | 25.444 | 169 | 119 | 3 | 221 | 389 | 271 | 432 | 2.30e-11 | 66.2 |
MS.gene027058.t1 | MTR_8g038550 | 23.387 | 248 | 133 | 5 | 218 | 423 | 187 | 419 | 3.72e-11 | 65.9 |
MS.gene027058.t1 | MTR_1g072740 | 26.257 | 179 | 120 | 5 | 202 | 377 | 282 | 451 | 3.88e-11 | 65.9 |
MS.gene027058.t1 | MTR_4g102520 | 26.257 | 179 | 120 | 5 | 202 | 377 | 283 | 452 | 4.38e-11 | 65.5 |
MS.gene027058.t1 | MTR_4g095058 | 24.260 | 169 | 125 | 3 | 212 | 379 | 411 | 577 | 4.94e-11 | 65.5 |
MS.gene027058.t1 | MTR_4g095058 | 24.260 | 169 | 125 | 3 | 212 | 379 | 409 | 575 | 5.58e-11 | 65.1 |
MS.gene027058.t1 | MTR_4g123597 | 31.858 | 113 | 76 | 1 | 273 | 385 | 73 | 184 | 6.58e-11 | 65.5 |
MS.gene027058.t1 | MTR_2g016690 | 28.082 | 146 | 94 | 4 | 270 | 413 | 14 | 150 | 7.42e-11 | 63.9 |
MS.gene027058.t1 | MTR_2g016690 | 20.606 | 330 | 189 | 8 | 108 | 388 | 6 | 311 | 8.12e-11 | 63.5 |
MS.gene027058.t1 | MTR_2g102267 | 24.623 | 199 | 133 | 5 | 213 | 408 | 58 | 242 | 9.69e-11 | 63.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene027058.t1 | AT1G73720 | 85.744 | 477 | 67 | 1 | 4 | 480 | 3 | 478 | 0.0 | 880 |
MS.gene027058.t1 | AT3G49660 | 31.461 | 178 | 111 | 2 | 211 | 385 | 110 | 279 | 1.83e-23 | 101 |
MS.gene027058.t1 | AT3G49660 | 32.934 | 167 | 102 | 3 | 222 | 387 | 79 | 236 | 1.15e-22 | 99.0 |
MS.gene027058.t1 | AT3G49660 | 29.439 | 214 | 144 | 5 | 221 | 431 | 31 | 240 | 2.48e-20 | 92.0 |
MS.gene027058.t1 | AT3G49660 | 30.935 | 139 | 90 | 2 | 254 | 387 | 14 | 151 | 3.57e-16 | 79.7 |
MS.gene027058.t1 | AT4G02730 | 25.940 | 266 | 176 | 6 | 212 | 473 | 41 | 289 | 8.60e-21 | 93.6 |
MS.gene027058.t1 | AT4G02730 | 28.033 | 239 | 160 | 6 | 245 | 481 | 24 | 252 | 1.89e-17 | 84.0 |
MS.gene027058.t1 | AT1G11160 | 28.090 | 178 | 119 | 2 | 212 | 389 | 14 | 182 | 2.33e-18 | 89.0 |
MS.gene027058.t1 | AT1G11160 | 28.090 | 178 | 119 | 2 | 212 | 389 | 56 | 224 | 2.44e-18 | 89.0 |
MS.gene027058.t1 | AT1G11160 | 28.090 | 178 | 119 | 2 | 212 | 389 | 56 | 224 | 2.55e-18 | 89.0 |
MS.gene027058.t1 | AT1G11160 | 28.090 | 178 | 119 | 2 | 212 | 389 | 56 | 224 | 3.21e-18 | 88.6 |
MS.gene027058.t1 | AT1G61210 | 28.090 | 178 | 119 | 2 | 212 | 389 | 56 | 224 | 7.10e-18 | 87.4 |
MS.gene027058.t1 | AT5G25150 | 30.303 | 165 | 106 | 2 | 220 | 384 | 466 | 621 | 8.54e-18 | 87.0 |
MS.gene027058.t1 | AT5G25150 | 28.283 | 198 | 127 | 4 | 206 | 403 | 410 | 592 | 3.00e-13 | 72.8 |
MS.gene027058.t1 | AT5G25150 | 31.343 | 134 | 83 | 2 | 209 | 342 | 497 | 621 | 2.83e-11 | 66.2 |
MS.gene027058.t1 | AT5G25150 | 30.303 | 165 | 106 | 2 | 220 | 384 | 466 | 621 | 9.62e-18 | 86.7 |
MS.gene027058.t1 | AT5G25150 | 28.283 | 198 | 127 | 4 | 206 | 403 | 410 | 592 | 2.99e-13 | 72.8 |
MS.gene027058.t1 | AT5G25150 | 31.343 | 134 | 83 | 2 | 209 | 342 | 497 | 621 | 2.82e-11 | 66.2 |
MS.gene027058.t1 | AT1G61210 | 28.090 | 178 | 119 | 2 | 212 | 389 | 56 | 224 | 1.07e-17 | 87.0 |
MS.gene027058.t1 | AT1G61210 | 28.090 | 178 | 119 | 2 | 212 | 389 | 56 | 224 | 1.09e-17 | 87.0 |
MS.gene027058.t1 | AT5G23430 | 28.492 | 179 | 119 | 2 | 211 | 389 | 56 | 225 | 3.96e-17 | 85.1 |
MS.gene027058.t1 | AT5G23430 | 28.492 | 179 | 119 | 2 | 211 | 389 | 56 | 225 | 3.96e-17 | 85.1 |
MS.gene027058.t1 | AT5G23430 | 28.492 | 179 | 119 | 2 | 211 | 389 | 56 | 225 | 4.03e-17 | 85.1 |
MS.gene027058.t1 | AT5G16750 | 29.012 | 162 | 112 | 2 | 228 | 387 | 461 | 621 | 1.18e-16 | 83.6 |
MS.gene027058.t1 | AT5G08390 | 28.824 | 170 | 112 | 2 | 211 | 380 | 56 | 216 | 2.97e-16 | 82.4 |
MS.gene027058.t1 | AT5G08390 | 31.746 | 126 | 85 | 1 | 263 | 388 | 58 | 182 | 1.35e-13 | 73.9 |
MS.gene027058.t1 | AT5G08390 | 26.531 | 196 | 131 | 7 | 254 | 445 | 7 | 193 | 1.86e-11 | 67.0 |
MS.gene027058.t1 | AT1G48630 | 31.056 | 161 | 98 | 4 | 222 | 378 | 71 | 222 | 5.40e-16 | 79.3 |
MS.gene027058.t1 | AT1G48630 | 27.451 | 255 | 154 | 12 | 229 | 473 | 31 | 264 | 3.45e-12 | 67.8 |
MS.gene027058.t1 | AT2G21390 | 32.353 | 170 | 105 | 3 | 210 | 378 | 4 | 164 | 1.00e-15 | 80.9 |
MS.gene027058.t1 | AT3G18130 | 30.435 | 161 | 99 | 4 | 222 | 378 | 71 | 222 | 2.88e-15 | 77.4 |
MS.gene027058.t1 | AT3G18130 | 27.734 | 256 | 152 | 12 | 229 | 473 | 31 | 264 | 3.64e-12 | 67.8 |
MS.gene027058.t1 | AT4G29830 | 30.374 | 214 | 125 | 6 | 196 | 390 | 88 | 296 | 3.99e-15 | 76.6 |
MS.gene027058.t1 | AT1G18080 | 32.099 | 162 | 96 | 4 | 222 | 378 | 71 | 223 | 4.16e-15 | 76.6 |
MS.gene027058.t1 | AT2G43770 | 33.333 | 126 | 83 | 1 | 263 | 387 | 52 | 177 | 5.39e-15 | 76.6 |
MS.gene027058.t1 | AT2G43770 | 25.731 | 171 | 114 | 4 | 222 | 388 | 104 | 265 | 1.17e-12 | 69.7 |
MS.gene027058.t1 | AT2G43770 | 29.268 | 205 | 118 | 9 | 229 | 424 | 154 | 340 | 3.17e-12 | 68.2 |
MS.gene027058.t1 | AT1G62020 | 31.765 | 170 | 106 | 3 | 210 | 378 | 4 | 164 | 7.73e-15 | 78.2 |
MS.gene027058.t1 | AT2G41500 | 29.487 | 156 | 100 | 3 | 222 | 376 | 389 | 535 | 3.51e-13 | 72.0 |
MS.gene027058.t1 | AT2G41500 | 27.586 | 174 | 113 | 3 | 214 | 384 | 295 | 458 | 5.73e-12 | 68.6 |
MS.gene027058.t1 | AT2G41500 | 27.624 | 181 | 116 | 3 | 211 | 388 | 252 | 420 | 7.72e-12 | 67.8 |
MS.gene027058.t1 | AT2G41500 | 29.487 | 156 | 100 | 3 | 222 | 376 | 389 | 535 | 3.51e-13 | 72.0 |
MS.gene027058.t1 | AT2G41500 | 27.586 | 174 | 113 | 3 | 214 | 384 | 295 | 458 | 5.73e-12 | 68.6 |
MS.gene027058.t1 | AT2G41500 | 27.624 | 181 | 116 | 3 | 211 | 388 | 252 | 420 | 7.72e-12 | 67.8 |
MS.gene027058.t1 | AT1G79990 | 30.052 | 193 | 116 | 7 | 198 | 380 | 77 | 260 | 5.00e-13 | 72.0 |
MS.gene027058.t1 | AT1G79990 | 30.052 | 193 | 116 | 7 | 198 | 380 | 77 | 260 | 5.25e-13 | 72.0 |
MS.gene027058.t1 | AT5G50230 | 24.227 | 194 | 134 | 4 | 200 | 390 | 251 | 434 | 5.67e-13 | 71.2 |
MS.gene027058.t1 | AT1G52360 | 29.688 | 192 | 118 | 7 | 198 | 380 | 77 | 260 | 6.62e-13 | 71.6 |
MS.gene027058.t1 | AT3G15980 | 29.688 | 192 | 118 | 7 | 198 | 380 | 77 | 260 | 7.59e-13 | 71.6 |
MS.gene027058.t1 | AT1G52360 | 29.688 | 192 | 118 | 7 | 198 | 380 | 77 | 260 | 8.04e-13 | 71.6 |
MS.gene027058.t1 | AT1G52360 | 29.688 | 192 | 118 | 7 | 198 | 380 | 77 | 260 | 8.04e-13 | 71.6 |
MS.gene027058.t1 | AT3G15980 | 29.688 | 192 | 118 | 7 | 198 | 380 | 77 | 260 | 8.12e-13 | 71.6 |
MS.gene027058.t1 | AT1G52360 | 29.688 | 192 | 118 | 7 | 198 | 380 | 121 | 304 | 8.19e-13 | 71.6 |
MS.gene027058.t1 | AT3G15980 | 29.688 | 192 | 118 | 7 | 198 | 380 | 77 | 260 | 1.03e-12 | 71.2 |
MS.gene027058.t1 | AT3G15980 | 29.688 | 192 | 118 | 7 | 198 | 380 | 77 | 260 | 1.04e-12 | 71.2 |
MS.gene027058.t1 | AT3G15980 | 29.688 | 192 | 118 | 7 | 198 | 380 | 77 | 260 | 1.04e-12 | 71.2 |
MS.gene027058.t1 | AT3G15980 | 29.688 | 192 | 118 | 7 | 198 | 380 | 77 | 260 | 1.04e-12 | 71.2 |
MS.gene027058.t1 | AT3G15980 | 29.688 | 192 | 118 | 7 | 198 | 380 | 77 | 260 | 1.04e-12 | 71.2 |
MS.gene027058.t1 | AT5G64730 | 29.108 | 213 | 127 | 8 | 212 | 422 | 100 | 290 | 1.05e-12 | 69.3 |
MS.gene027058.t1 | AT5G52820 | 30.256 | 195 | 110 | 7 | 194 | 377 | 89 | 268 | 2.05e-12 | 69.7 |
MS.gene027058.t1 | AT5G52820 | 24.868 | 189 | 114 | 4 | 219 | 380 | 246 | 433 | 5.55e-11 | 65.1 |
MS.gene027058.t1 | AT5G52820 | 33.036 | 112 | 66 | 2 | 222 | 333 | 368 | 470 | 6.80e-11 | 64.7 |
MS.gene027058.t1 | AT5G52820 | 30.405 | 148 | 95 | 2 | 229 | 376 | 332 | 471 | 9.34e-11 | 64.3 |
MS.gene027058.t1 | AT1G49040 | 24.800 | 250 | 159 | 8 | 202 | 439 | 884 | 1116 | 2.22e-12 | 70.1 |
MS.gene027058.t1 | AT4G11110 | 33.544 | 158 | 91 | 6 | 227 | 381 | 786 | 932 | 3.16e-12 | 69.7 |
MS.gene027058.t1 | AT2G46280 | 28.261 | 184 | 117 | 4 | 302 | 476 | 5 | 182 | 3.43e-12 | 67.0 |
MS.gene027058.t1 | AT3G18140 | 22.105 | 285 | 193 | 9 | 207 | 475 | 15 | 286 | 4.13e-12 | 67.4 |
MS.gene027058.t1 | AT2G32700 | 28.743 | 167 | 104 | 7 | 221 | 385 | 559 | 712 | 4.25e-12 | 68.9 |
MS.gene027058.t1 | AT2G32700 | 26.027 | 219 | 142 | 9 | 267 | 481 | 513 | 715 | 2.48e-11 | 66.6 |
MS.gene027058.t1 | AT2G32700 | 28.743 | 167 | 104 | 7 | 221 | 385 | 559 | 712 | 4.25e-12 | 68.9 |
MS.gene027058.t1 | AT2G32700 | 26.027 | 219 | 142 | 9 | 267 | 481 | 513 | 715 | 2.48e-11 | 66.6 |
MS.gene027058.t1 | AT2G32700 | 28.743 | 167 | 104 | 7 | 221 | 385 | 559 | 712 | 4.25e-12 | 68.9 |
MS.gene027058.t1 | AT2G32700 | 26.027 | 219 | 142 | 9 | 267 | 481 | 513 | 715 | 2.48e-11 | 66.6 |
MS.gene027058.t1 | AT2G32700 | 28.743 | 167 | 104 | 7 | 221 | 385 | 559 | 712 | 4.25e-12 | 68.9 |
MS.gene027058.t1 | AT2G32700 | 26.027 | 219 | 142 | 9 | 267 | 481 | 513 | 715 | 2.48e-11 | 66.6 |
MS.gene027058.t1 | AT2G32700 | 28.743 | 167 | 104 | 7 | 221 | 385 | 559 | 712 | 4.25e-12 | 68.9 |
MS.gene027058.t1 | AT2G32700 | 26.027 | 219 | 142 | 9 | 267 | 481 | 513 | 715 | 2.48e-11 | 66.6 |
MS.gene027058.t1 | AT2G32700 | 28.743 | 167 | 104 | 7 | 221 | 385 | 557 | 710 | 4.44e-12 | 68.9 |
MS.gene027058.t1 | AT2G32700 | 26.027 | 219 | 142 | 9 | 267 | 481 | 511 | 713 | 2.85e-11 | 66.6 |
MS.gene027058.t1 | AT2G32700 | 28.743 | 167 | 104 | 7 | 221 | 385 | 578 | 731 | 4.49e-12 | 68.9 |
MS.gene027058.t1 | AT2G32700 | 26.027 | 219 | 142 | 9 | 267 | 481 | 532 | 734 | 3.01e-11 | 66.2 |
MS.gene027058.t1 | AT4G04940 | 27.778 | 162 | 110 | 3 | 219 | 378 | 430 | 586 | 5.84e-12 | 68.6 |
MS.gene027058.t1 | AT5G67320 | 27.016 | 248 | 147 | 9 | 221 | 451 | 372 | 602 | 5.93e-12 | 68.6 |
MS.gene027058.t1 | AT4G04940 | 27.778 | 162 | 110 | 3 | 219 | 378 | 316 | 472 | 7.09e-12 | 68.6 |
MS.gene027058.t1 | AT1G10580 | 26.064 | 188 | 128 | 4 | 194 | 378 | 262 | 441 | 9.06e-12 | 67.8 |
MS.gene027058.t1 | AT2G47410 | 25.137 | 183 | 125 | 4 | 263 | 439 | 234 | 410 | 9.48e-12 | 68.2 |
MS.gene027058.t1 | AT2G47410 | 25.137 | 183 | 125 | 4 | 263 | 439 | 235 | 411 | 9.65e-12 | 68.2 |
MS.gene027058.t1 | AT2G47410 | 25.137 | 183 | 125 | 4 | 263 | 439 | 53 | 229 | 1.14e-11 | 68.2 |
MS.gene027058.t1 | AT2G46280 | 28.261 | 184 | 117 | 4 | 302 | 476 | 5 | 182 | 1.63e-11 | 65.9 |
MS.gene027058.t1 | AT2G46280 | 28.261 | 184 | 117 | 4 | 302 | 476 | 5 | 182 | 1.63e-11 | 65.9 |
MS.gene027058.t1 | AT2G47410 | 25.654 | 191 | 124 | 5 | 263 | 439 | 235 | 421 | 2.32e-11 | 67.0 |
MS.gene027058.t1 | AT3G21540 | 30.973 | 113 | 77 | 1 | 273 | 385 | 73 | 184 | 2.75e-11 | 66.6 |
MS.gene027058.t1 | AT4G15900 | 22.472 | 267 | 182 | 6 | 132 | 387 | 88 | 340 | 2.77e-11 | 65.9 |
MS.gene027058.t1 | AT2G47410 | 25.654 | 191 | 124 | 5 | 263 | 439 | 53 | 239 | 2.86e-11 | 66.6 |
MS.gene027058.t1 | AT2G47410 | 25.654 | 191 | 124 | 5 | 263 | 439 | 53 | 239 | 2.86e-11 | 66.6 |
MS.gene027058.t1 | AT2G22040 | 23.423 | 222 | 162 | 5 | 259 | 477 | 79 | 295 | 3.22e-11 | 64.7 |
MS.gene027058.t1 | AT5G60940 | 22.796 | 329 | 214 | 11 | 143 | 440 | 34 | 353 | 3.35e-11 | 65.5 |
MS.gene027058.t1 | AT2G46290 | 29.630 | 189 | 108 | 5 | 302 | 476 | 32 | 209 | 3.45e-11 | 65.1 |
Find 99 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTAAGCCACCTCCTCCTTTA+AGG | 0.126039 | 3.3:-43397554 | MS.gene027058:CDS |
TTTAAAAGACATACCCTTAA+AGG | 0.162911 | 3.3:+43397540 | None:intergenic |
CAAATGAAGTACTTAATAAT+TGG | 0.223597 | 3.3:+43398268 | None:intergenic |
TCAAGCCGCAAATATCTTTC+AGG | 0.244518 | 3.3:+43404546 | None:intergenic |
CAGTAAATCCATTCCCCTTT+AGG | 0.259232 | 3.3:+43396450 | None:intergenic |
GGTGCCACCTTCCCGATTAA+TGG | 0.260412 | 3.3:-43403912 | MS.gene027058:CDS |
CTCGTTTCGTGTTCGATTGA+TGG | 0.265154 | 3.3:-43401236 | MS.gene027058:CDS |
AGGGTTATTCTGACCTCATT+TGG | 0.267585 | 3.3:+43404495 | None:intergenic |
AACAATGTGTTCAGTATTCT+TGG | 0.269560 | 3.3:+43397389 | None:intergenic |
TCCCGATTAATGGCTTTAAT+TGG | 0.278773 | 3.3:-43403902 | MS.gene027058:CDS |
CAATTTAGGTGTGGCGTATA+AGG | 0.290323 | 3.3:-43398368 | MS.gene027058:intron |
CAGCTATCAATCTGGCAAAT+TGG | 0.305644 | 3.3:-43395816 | MS.gene027058:CDS |
GACCAATTAAAGCCATTAAT+CGG | 0.323254 | 3.3:+43403900 | None:intergenic |
AGAATCCATGGCCTCAAATC+TGG | 0.339334 | 3.3:-43397806 | MS.gene027058:CDS |
CAATCTTTCTCATACTATAA+AGG | 0.357142 | 3.3:-43402985 | MS.gene027058:intron |
CTTTATAGTATGAGAAAGAT+TGG | 0.361396 | 3.3:+43402986 | None:intergenic |
ATACAGCACGTGCTATATTA+AGG | 0.361981 | 3.3:-43404605 | MS.gene027058:CDS |
TAAGCCACCTCCTCCTTTAA+GGG | 0.376106 | 3.3:-43397553 | MS.gene027058:intron |
TTTCTCAACTTAAGCTTCCT+AGG | 0.377841 | 3.3:-43406136 | MS.gene027058:CDS |
CAGCCTGCATTTCACCTAAA+GGG | 0.386772 | 3.3:-43396464 | MS.gene027058:CDS |
ATTAATGGCTTTAATTGGTC+AGG | 0.390869 | 3.3:-43403897 | MS.gene027058:CDS |
ACAATGTGTTCAGTATTCTT+GGG | 0.392690 | 3.3:+43397390 | None:intergenic |
TCAACATCTTTCCAGATTTG+AGG | 0.398406 | 3.3:+43397795 | None:intergenic |
GGGTTATTCTGACCTCATTT+GGG | 0.410387 | 3.3:+43404496 | None:intergenic |
AATGATTGAACTTAGAGAAC+TGG | 0.413902 | 3.3:-43404628 | MS.gene027058:CDS |
AACAAATCAAACTGTGTTCC+AGG | 0.417337 | 3.3:+43403056 | None:intergenic |
ATATACATCATGACACTTCA+AGG | 0.432915 | 3.3:-43397345 | MS.gene027058:CDS |
GATTCAGAGATGATTGCGTC+TGG | 0.433427 | 3.3:-43400489 | MS.gene027058:CDS |
CTCATTCTGCAGTGTTTGAA+AGG | 0.437433 | 3.3:+43406247 | None:intergenic |
AACTCACTTCTGCCTGGTAC+TGG | 0.439927 | 3.3:+43401051 | None:intergenic |
CTTGCAGGTTTACTTCCTCC+TGG | 0.446238 | 3.3:-43403074 | MS.gene027058:intron |
ATAGTATGAGAAAGATTGGT+TGG | 0.451292 | 3.3:+43402990 | None:intergenic |
TCGTTTCGTGTTCGATTGAT+GGG | 0.454156 | 3.3:-43401235 | MS.gene027058:CDS |
ACACAGTTTGATTTGTTTCG+TGG | 0.463603 | 3.3:-43403050 | MS.gene027058:CDS |
ACCAATTAAAGCCATTAATC+GGG | 0.465451 | 3.3:+43403901 | None:intergenic |
CATCGTTCACATAAGATGTA+TGG | 0.468533 | 3.3:+43397759 | None:intergenic |
TAGGTCTGGGATTACATAAG+TGG | 0.475587 | 3.3:-43401092 | MS.gene027058:CDS |
TTCGATTGATGGGTTTATTG+AGG | 0.478206 | 3.3:-43401225 | MS.gene027058:intron |
TACTGCTTCAGCTATCAATC+TGG | 0.478270 | 3.3:-43395824 | MS.gene027058:CDS |
GAAACGAGATATTGCCCATC+TGG | 0.481722 | 3.3:+43401251 | None:intergenic |
ATTAAGGCAAACACAGGTGA+TGG | 0.488351 | 3.3:-43404589 | MS.gene027058:CDS |
GACCTTGACTGTACAATCAC+TGG | 0.490197 | 3.3:+43397697 | None:intergenic |
GCAGCCTGCATTTCACCTAA+AGG | 0.492408 | 3.3:-43396465 | MS.gene027058:CDS |
CTGATATTAATGGTGGAAGA+TGG | 0.494607 | 3.3:-43406178 | MS.gene027058:CDS |
AAATCCTCCAACGTATTCCT+AGG | 0.497474 | 3.3:+43406119 | None:intergenic |
GTTGGAGGATTTGTATGAGC+AGG | 0.499004 | 3.3:-43406108 | MS.gene027058:intron |
TCTTTCCAGATTTGAGGCCA+TGG | 0.499670 | 3.3:+43397801 | None:intergenic |
TTCCCCTTTAGGTGAAATGC+AGG | 0.505806 | 3.3:+43396461 | None:intergenic |
GCATTTCACCTAAAGGGGAA+TGG | 0.518532 | 3.3:-43396458 | MS.gene027058:CDS |
AGGAAACACTTGTGACACCT+TGG | 0.524600 | 3.3:+43398307 | None:intergenic |
GCTTCCTAGGAATACGTTGG+AGG | 0.526813 | 3.3:-43406123 | MS.gene027058:CDS |
TTTATGTAATATAGAATCCA+TGG | 0.528418 | 3.3:-43397818 | MS.gene027058:intron |
AGCAACCTGAAAGATATTTG+CGG | 0.528841 | 3.3:-43404551 | MS.gene027058:CDS |
AGTGTTTCCTTCTCTCGTGA+TGG | 0.532136 | 3.3:-43398294 | MS.gene027058:CDS |
ATTGCGTCTGGGTCAACAGA+TGG | 0.537444 | 3.3:-43400477 | MS.gene027058:CDS |
GGAAACACTTGTGACACCTT+GGG | 0.541225 | 3.3:+43398308 | None:intergenic |
CAAGAAAGATCTCCAGTACC+AGG | 0.542577 | 3.3:-43401063 | MS.gene027058:CDS |
TGATATTAATGGTGGAAGAT+GGG | 0.548370 | 3.3:-43406177 | MS.gene027058:CDS |
TTTACTGTGTTGGTGAAGAC+AGG | 0.554919 | 3.3:-43396434 | MS.gene027058:intron |
CAATGTGTTCAGTATTCTTG+GGG | 0.556681 | 3.3:+43397391 | None:intergenic |
TTGGCTTCCATCACGAGAGA+AGG | 0.559385 | 3.3:+43398287 | None:intergenic |
CATCATGACACTTCAAGGAC+AGG | 0.559819 | 3.3:-43397340 | MS.gene027058:intron |
AAAACTAACTCACTTCTGCC+TGG | 0.560939 | 3.3:+43401045 | None:intergenic |
TTCTTTGCAGAATTGAAGCA+CGG | 0.573682 | 3.3:+43406286 | None:intergenic |
GTTGTGAAGAGTTTCTCATC+CGG | 0.577178 | 3.3:-43396513 | MS.gene027058:CDS |
AAAAGACATACCCTTAAAGG+AGG | 0.581562 | 3.3:+43397543 | None:intergenic |
AGACATACCCTTAAAGGAGG+AGG | 0.583079 | 3.3:+43397546 | None:intergenic |
CTCCAGTGATTGTACAGTCA+AGG | 0.583428 | 3.3:-43397699 | MS.gene027058:intron |
CATACCCTTAAAGGAGGAGG+TGG | 0.585967 | 3.3:+43397549 | None:intergenic |
TTGAAGTGGCAGCAGCATCA+AGG | 0.591907 | 3.3:-43403872 | MS.gene027058:intron |
AGCCTGCATTTCACCTAAAG+GGG | 0.593472 | 3.3:-43396463 | MS.gene027058:CDS |
CTTGAGCATGCACATTCCCA+AGG | 0.596948 | 3.3:-43398324 | MS.gene027058:CDS |
GGGGAATGGATTTACTGTGT+TGG | 0.600201 | 3.3:-43396444 | MS.gene027058:CDS |
CAAATTGGAGCATTTGATGA+CGG | 0.604210 | 3.3:-43395801 | None:intergenic |
TAAGCTTCCTAGGAATACGT+TGG | 0.605094 | 3.3:-43406126 | MS.gene027058:CDS |
TTAAGGCAAACACAGGTGAT+GGG | 0.605428 | 3.3:-43404588 | MS.gene027058:CDS |
TTTGTTGCTGATATTAATGG+TGG | 0.609050 | 3.3:-43406185 | MS.gene027058:CDS |
TTTCTCATCCGGTAAAAGAG+AGG | 0.616752 | 3.3:-43396502 | MS.gene027058:CDS |
TTCTCATCCGGTAAAAGAGA+GGG | 0.617919 | 3.3:-43396501 | MS.gene027058:CDS |
ATGCAACTTTCACCAACGAT+GGG | 0.624736 | 3.3:-43397739 | MS.gene027058:CDS |
CTTCATTTGACAGCACTGCA+AGG | 0.625291 | 3.3:-43398254 | MS.gene027058:intron |
GATGCAACTTTCACCAACGA+TGG | 0.630695 | 3.3:-43397740 | MS.gene027058:CDS |
TGTCATGATGTATATTGATG+AGG | 0.633416 | 3.3:+43397353 | None:intergenic |
ATTAAAGCCATTAATCGGGA+AGG | 0.633948 | 3.3:+43403905 | None:intergenic |
AAAGCCATTAATCGGGAAGG+TGG | 0.634806 | 3.3:+43403908 | None:intergenic |
ATTCAGAGATGATTGCGTCT+GGG | 0.635394 | 3.3:-43400488 | MS.gene027058:CDS |
TAATTGGTCAGGCTTTGAAG+TGG | 0.643377 | 3.3:-43403886 | MS.gene027058:CDS |
CGACGTGCGCAAATAGCCCA+AGG | 0.643885 | 3.3:-43404294 | MS.gene027058:intron |
TCATCCGGTAAAAGAGAGGG+TGG | 0.644516 | 3.3:-43396498 | MS.gene027058:CDS |
TGCTATATTAAGGCAAACAC+AGG | 0.649298 | 3.3:-43404595 | MS.gene027058:CDS |
AATAACACGACTCCCATCGT+TGG | 0.652443 | 3.3:+43397727 | None:intergenic |
AGCTTAAGTTGAGAAACTTG+AGG | 0.653611 | 3.3:+43406143 | None:intergenic |
TAAGGACTGCTCAATGCTTG+CGG | 0.664341 | 3.3:-43398350 | MS.gene027058:CDS |
AACATTCATGATGCATGATG+AGG | 0.666174 | 3.3:-43400538 | MS.gene027058:CDS |
AAGATGTTGAAAGAGTTTCG+TGG | 0.666526 | 3.3:-43397782 | MS.gene027058:CDS |
AGCTGCTATGAAACAAGATG+TGG | 0.677744 | 3.3:-43403024 | MS.gene027058:CDS |
AAATCAAACTGTGTTCCAGG+AGG | 0.700624 | 3.3:+43403059 | None:intergenic |
CTTGACTGTACAATCACTGG+AGG | 0.704322 | 3.3:+43397700 | None:intergenic |
TATTGCAGCAGAAGTGACTG+TGG | 0.757005 | 3.3:-43403933 | MS.gene027058:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.3 | gene | 43395802 | 43406462 | 43395802 | ID=MS.gene027058 |
chr3.3 | mRNA | 43395802 | 43406462 | 43395802 | ID=MS.gene027058.t1;Parent=MS.gene027058 |
chr3.3 | exon | 43406434 | 43406462 | 43406434 | ID=MS.gene027058.t1.exon1;Parent=MS.gene027058.t1 |
chr3.3 | CDS | 43406434 | 43406462 | 43406434 | ID=cds.MS.gene027058.t1;Parent=MS.gene027058.t1 |
chr3.3 | exon | 43406109 | 43406319 | 43406109 | ID=MS.gene027058.t1.exon2;Parent=MS.gene027058.t1 |
chr3.3 | CDS | 43406109 | 43406319 | 43406109 | ID=cds.MS.gene027058.t1;Parent=MS.gene027058.t1 |
chr3.3 | exon | 43404509 | 43404661 | 43404509 | ID=MS.gene027058.t1.exon3;Parent=MS.gene027058.t1 |
chr3.3 | CDS | 43404509 | 43404661 | 43404509 | ID=cds.MS.gene027058.t1;Parent=MS.gene027058.t1 |
chr3.3 | exon | 43404295 | 43404343 | 43404295 | ID=MS.gene027058.t1.exon4;Parent=MS.gene027058.t1 |
chr3.3 | CDS | 43404295 | 43404343 | 43404295 | ID=cds.MS.gene027058.t1;Parent=MS.gene027058.t1 |
chr3.3 | exon | 43403873 | 43403956 | 43403873 | ID=MS.gene027058.t1.exon5;Parent=MS.gene027058.t1 |
chr3.3 | CDS | 43403873 | 43403956 | 43403873 | ID=cds.MS.gene027058.t1;Parent=MS.gene027058.t1 |
chr3.3 | exon | 43402986 | 43403089 | 43402986 | ID=MS.gene027058.t1.exon6;Parent=MS.gene027058.t1 |
chr3.3 | CDS | 43402986 | 43403089 | 43402986 | ID=cds.MS.gene027058.t1;Parent=MS.gene027058.t1 |
chr3.3 | exon | 43401226 | 43401312 | 43401226 | ID=MS.gene027058.t1.exon7;Parent=MS.gene027058.t1 |
chr3.3 | CDS | 43401226 | 43401312 | 43401226 | ID=cds.MS.gene027058.t1;Parent=MS.gene027058.t1 |
chr3.3 | exon | 43401058 | 43401111 | 43401058 | ID=MS.gene027058.t1.exon8;Parent=MS.gene027058.t1 |
chr3.3 | CDS | 43401058 | 43401111 | 43401058 | ID=cds.MS.gene027058.t1;Parent=MS.gene027058.t1 |
chr3.3 | exon | 43400467 | 43400562 | 43400467 | ID=MS.gene027058.t1.exon9;Parent=MS.gene027058.t1 |
chr3.3 | CDS | 43400467 | 43400562 | 43400467 | ID=cds.MS.gene027058.t1;Parent=MS.gene027058.t1 |
chr3.3 | exon | 43398255 | 43398382 | 43398255 | ID=MS.gene027058.t1.exon10;Parent=MS.gene027058.t1 |
chr3.3 | CDS | 43398255 | 43398382 | 43398255 | ID=cds.MS.gene027058.t1;Parent=MS.gene027058.t1 |
chr3.3 | exon | 43397700 | 43397826 | 43397700 | ID=MS.gene027058.t1.exon11;Parent=MS.gene027058.t1 |
chr3.3 | CDS | 43397700 | 43397826 | 43397700 | ID=cds.MS.gene027058.t1;Parent=MS.gene027058.t1 |
chr3.3 | exon | 43397554 | 43397613 | 43397554 | ID=MS.gene027058.t1.exon12;Parent=MS.gene027058.t1 |
chr3.3 | CDS | 43397554 | 43397613 | 43397554 | ID=cds.MS.gene027058.t1;Parent=MS.gene027058.t1 |
chr3.3 | exon | 43397341 | 43397448 | 43397341 | ID=MS.gene027058.t1.exon13;Parent=MS.gene027058.t1 |
chr3.3 | CDS | 43397341 | 43397448 | 43397341 | ID=cds.MS.gene027058.t1;Parent=MS.gene027058.t1 |
chr3.3 | exon | 43396435 | 43396535 | 43396435 | ID=MS.gene027058.t1.exon14;Parent=MS.gene027058.t1 |
chr3.3 | CDS | 43396435 | 43396535 | 43396435 | ID=cds.MS.gene027058.t1;Parent=MS.gene027058.t1 |
chr3.3 | exon | 43395802 | 43395853 | 43395802 | ID=MS.gene027058.t1.exon15;Parent=MS.gene027058.t1 |
chr3.3 | CDS | 43395802 | 43395853 | 43395802 | ID=cds.MS.gene027058.t1;Parent=MS.gene027058.t1 |
Gene Sequence |
Protein sequence |