Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051776.t1 | XP_013450280.1 | 97 | 268 | 8 | 0 | 1 | 268 | 13 | 280 | 2.90E-144 | 521.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051776.t1 | Q9SF09 | 70.0 | 267 | 80 | 0 | 2 | 268 | 32 | 298 | 1.8e-110 | 400.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051776.t1 | A0A072U589 | 97.0 | 268 | 8 | 0 | 1 | 268 | 13 | 280 | 2.1e-144 | 521.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051776 | MS.gene051778 | 0.908172 | 2.29E-81 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 67 sgRNAs with CRISPR-Local
Find 116 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAGTCTGAGCCAGCAATTT+TGG | 0.194534 | 7.3:-6658638 | None:intergenic |
| CGGATTGCTGGTTGGGTTGC+TGG | 0.195646 | 7.3:+6657459 | MS.gene051776:CDS |
| ATGCTAGTACCAGTTGAAAT+TGG | 0.202789 | 7.3:+6658356 | MS.gene051776:CDS |
| ACCAGCTCCTAGGGAGATTA+AGG | 0.232883 | 7.3:-6658742 | None:intergenic |
| GTTGCGTATTTGGTATTTAT+TGG | 0.257482 | 7.3:+6658275 | MS.gene051776:CDS |
| TGCAGGATCTGTTGCGTATT+TGG | 0.266618 | 7.3:+6658265 | MS.gene051776:CDS |
| GCTTCAAAGCTTCAAACTTT+GGG | 0.276040 | 7.3:+6657381 | MS.gene051776:CDS |
| TGTAGTTGGAACTGGTGTTT+TGG | 0.282817 | 7.3:+6657419 | MS.gene051776:CDS |
| TTGCGTATTTGGTATTTATT+GGG | 0.311051 | 7.3:+6658276 | MS.gene051776:CDS |
| AGCTTCAAAGCTTCAAACTT+TGG | 0.322711 | 7.3:+6657380 | MS.gene051776:CDS |
| CGGCAATCACGTCGAACATT+GGG | 0.331674 | 7.3:+6658519 | MS.gene051776:CDS |
| AATATCATTGTTACTGTAGT+TGG | 0.346950 | 7.3:+6657405 | MS.gene051776:CDS |
| TTATGTGGTTACATGGCTTT+TGG | 0.362879 | 7.3:+6658695 | MS.gene051776:CDS |
| AAGTAGGAGCATGCAATAAT+AGG | 0.366520 | 7.3:-6657514 | None:intergenic |
| AAACGAAAACCCATCCTCTA+AGG | 0.374336 | 7.3:-6658486 | None:intergenic |
| AGCTAAATTCCCAAAATTGC+TGG | 0.379222 | 7.3:+6658628 | MS.gene051776:CDS |
| TGCTAGTACCAGTTGAAATT+GGG | 0.393945 | 7.3:+6658357 | MS.gene051776:CDS |
| GACCTGGGTTATAGATGCTT+TGG | 0.394530 | 7.3:+6658194 | MS.gene051776:CDS |
| GGTTGGGTTGCTGGCTCGCT+TGG | 0.405595 | 7.3:+6657468 | MS.gene051776:CDS |
| TTAGTGGAATCAAGATCTTA+TGG | 0.409655 | 7.3:+6658170 | MS.gene051776:CDS |
| GTTGCCATTTGCAGCAGGCA+TGG | 0.411945 | 7.3:+6658544 | MS.gene051776:CDS |
| CTGGTCATCTCTTGCCGTAC+AGG | 0.421828 | 7.3:+6658760 | MS.gene051776:CDS |
| TATCCTTCATAGAATTCTCT+AGG | 0.427773 | 7.3:-6658604 | None:intergenic |
| TATAGATGCTTTGGAACATT+CGG | 0.429944 | 7.3:+6658203 | MS.gene051776:CDS |
| ACAGCCATGCCTGCTGCAAA+TGG | 0.444083 | 7.3:-6658548 | None:intergenic |
| ATTGTTACTGTAGTTGGAAC+TGG | 0.462436 | 7.3:+6657411 | MS.gene051776:CDS |
| ATTAAGGGTCACAATGTCTC+TGG | 0.463981 | 7.3:-6658726 | None:intergenic |
| CATGACATCCCAATTTCAAC+TGG | 0.479088 | 7.3:-6658365 | None:intergenic |
| TCGCTTGGTGTTGCTATCGT+TGG | 0.480171 | 7.3:+6657483 | MS.gene051776:CDS |
| AGATGTACGAGTGGCCTTAG+AGG | 0.486364 | 7.3:+6658472 | MS.gene051776:CDS |
| CCAGCTCCTAGGGAGATTAA+GGG | 0.501513 | 7.3:-6658741 | None:intergenic |
| GCAAGAGATGACCAGCTCCT+AGG | 0.507015 | 7.3:-6658752 | None:intergenic |
| GGTTTGGTGCAGAGATAAGT+TGG | 0.507286 | 7.3:+6658133 | MS.gene051776:intron |
| TACGAGTGGCCTTAGAGGAT+GGG | 0.517363 | 7.3:+6658477 | MS.gene051776:CDS |
| CAGTTGAAATTGGGATGTCA+TGG | 0.517566 | 7.3:+6658366 | MS.gene051776:CDS |
| ACGGCAATCACGTCGAACAT+TGG | 0.520931 | 7.3:+6658518 | MS.gene051776:CDS |
| CCCTTAATCTCCCTAGGAGC+TGG | 0.522429 | 7.3:+6658741 | MS.gene051776:CDS |
| CTTCAAAGCTTCAAACTTTG+GGG | 0.529013 | 7.3:+6657382 | MS.gene051776:CDS |
| CAAGAGATGACCAGCTCCTA+GGG | 0.531338 | 7.3:-6658751 | None:intergenic |
| ATCAAGATCTTATGGAGACC+TGG | 0.532309 | 7.3:+6658178 | MS.gene051776:CDS |
| GTACGAGTGGCCTTAGAGGA+TGG | 0.538625 | 7.3:+6658476 | MS.gene051776:CDS |
| GGCATCAGAAGAGCCGTTAG+TGG | 0.542217 | 7.3:+6658154 | MS.gene051776:CDS |
| TGCCCTAGAGAATTCTATGA+AGG | 0.544325 | 7.3:+6658601 | MS.gene051776:CDS |
| TATGAATGTCTTTACCTGTA+CGG | 0.553018 | 7.3:-6658774 | None:intergenic |
| ACCAGCAATCCGAAAAGCAA+AGG | 0.553289 | 7.3:-6657448 | None:intergenic |
| TGGTACTAGCATAAATATGT+AGG | 0.553563 | 7.3:-6658345 | None:intergenic |
| TTATAAATTCTGTCAGATAC+CGG | 0.554125 | 7.3:-6658226 | None:intergenic |
| TTCCAAAGCATCTATAACCC+AGG | 0.563102 | 7.3:-6658196 | None:intergenic |
| CCAGCAATCCGAAAAGCAAA+GGG | 0.563950 | 7.3:-6657447 | None:intergenic |
| ATCCTTCATAGAATTCTCTA+GGG | 0.566292 | 7.3:-6658603 | None:intergenic |
| TGTGTGCAATGTCCTAGCTA+TGG | 0.568520 | 7.3:+6658433 | MS.gene051776:CDS |
| TAAGATCTTGATTCCACTAA+CGG | 0.573803 | 7.3:-6658167 | None:intergenic |
| ATCGTGGTAGCACAATGTGC+AGG | 0.583248 | 7.3:+6658248 | MS.gene051776:CDS |
| GAAATTGGGATGTCATGGAT+AGG | 0.588699 | 7.3:+6658371 | MS.gene051776:CDS |
| AGCTATGGGAATTGTAGTGA+AGG | 0.588848 | 7.3:+6658448 | MS.gene051776:CDS |
| TCAAGATCTTATGGAGACCT+GGG | 0.593639 | 7.3:+6658179 | MS.gene051776:CDS |
| TTGTGACCCTTAATCTCCCT+AGG | 0.597351 | 7.3:+6658735 | MS.gene051776:CDS |
| GATGCTTTGGAACATTCGGC+CGG | 0.602453 | 7.3:+6658207 | MS.gene051776:CDS |
| TCACTACAATTCCCATAGCT+AGG | 0.603325 | 7.3:-6658445 | None:intergenic |
| GGCAATCACGTCGAACATTG+GGG | 0.609772 | 7.3:+6658520 | MS.gene051776:CDS |
| TCTGACAGAATTTATAATCG+TGG | 0.625652 | 7.3:+6658232 | MS.gene051776:CDS |
| TACTAGCATAAATATGTAGG+AGG | 0.630914 | 7.3:-6658342 | None:intergenic |
| GTGTGCAATGTCCTAGCTAT+GGG | 0.634606 | 7.3:+6658434 | MS.gene051776:CDS |
| AATATGTAGGAGGCAAGCGA+TGG | 0.653012 | 7.3:-6658332 | None:intergenic |
| CAATCACGTCGAACATTGGG+GGG | 0.667136 | 7.3:+6658522 | MS.gene051776:CDS |
| AGTGAAGGAAGATGTACGAG+TGG | 0.702478 | 7.3:+6658463 | MS.gene051776:CDS |
| GCAATCACGTCGAACATTGG+GGG | 0.711818 | 7.3:+6658521 | MS.gene051776:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAGTAGTAAAAAAATAAAA+AGG | - | chr7.3:6657796-6657815 | None:intergenic | 10.0% |
| !!! | TACTACTATTCTTTTTTATT+GGG | + | chr7.3:6657807-6657826 | MS.gene051776:intron | 15.0% |
| !!! | TTACTACTATTCTTTTTTAT+TGG | + | chr7.3:6657806-6657825 | MS.gene051776:intron | 15.0% |
| !! | TAGATTATTCCATTACTAAA+AGG | + | chr7.3:6657870-6657889 | MS.gene051776:intron | 20.0% |
| !!! | ACTACTATTCTTTTTTATTG+GGG | + | chr7.3:6657808-6657827 | MS.gene051776:intron | 20.0% |
| ! | AATATCATTGTTACTGTAGT+TGG | + | chr7.3:6657405-6657424 | MS.gene051776:CDS | 25.0% |
| ! | GATTCTGTATTCCAAAAATA+TGG | + | chr7.3:6658308-6658327 | MS.gene051776:CDS | 25.0% |
| ! | TATAACATTTGTGAAAGTAG+TGG | - | chr7.3:6657765-6657784 | None:intergenic | 25.0% |
| ! | TGGAATAATCTAATCTAAGT+CGG | - | chr7.3:6657862-6657881 | None:intergenic | 25.0% |
| ! | TGTTCCGTATTACTTTAAAT+TGG | - | chr7.3:6657898-6657917 | None:intergenic | 25.0% |
| ! | TTATAAATTCTGTCAGATAC+CGG | - | chr7.3:6658229-6658248 | None:intergenic | 25.0% |
| ! | TTGCGTATTTGGTATTTATT+GGG | + | chr7.3:6658276-6658295 | MS.gene051776:CDS | 25.0% |
| !! | GGAACCAATTTAAAGTAATA+CGG | + | chr7.3:6657891-6657910 | MS.gene051776:intron | 25.0% |
| !!! | AAATTGGTTCCTTTTAGTAA+TGG | - | chr7.3:6657882-6657901 | None:intergenic | 25.0% |
| !!! | ATTTTTGGAATACAGAATCA+AGG | - | chr7.3:6658307-6658326 | None:intergenic | 25.0% |
| !!! | GATTTTGATTTCATTGATAC+AGG | + | chr7.3:6658112-6658131 | MS.gene051776:intron | 25.0% |
| AAATGCATCACGCATAATAA+TGG | - | chr7.3:6657942-6657961 | None:intergenic | 30.0% | |
| ACATCAGCAAAAATGCTAAA+TGG | - | chr7.3:6658416-6658435 | None:intergenic | 30.0% | |
| ATCCTTCATAGAATTCTCTA+GGG | - | chr7.3:6658606-6658625 | None:intergenic | 30.0% | |
| ATGAGCATAGAATTTGATTC+AGG | + | chr7.3:6657635-6657654 | MS.gene051776:intron | 30.0% | |
| ATTCAGGTAGGTTTCAATAT+TGG | + | chr7.3:6657651-6657670 | MS.gene051776:intron | 30.0% | |
| GTTGCGTATTTGGTATTTAT+TGG | + | chr7.3:6658275-6658294 | MS.gene051776:CDS | 30.0% | |
| TAAGATCTTGATTCCACTAA+CGG | - | chr7.3:6658170-6658189 | None:intergenic | 30.0% | |
| TACTAGCATAAATATGTAGG+AGG | - | chr7.3:6658345-6658364 | None:intergenic | 30.0% | |
| TATCCTTCATAGAATTCTCT+AGG | - | chr7.3:6658607-6658626 | None:intergenic | 30.0% | |
| TCTGACAGAATTTATAATCG+TGG | + | chr7.3:6658232-6658251 | MS.gene051776:CDS | 30.0% | |
| TGATTTCATTGATACAGGTT+TGG | + | chr7.3:6658117-6658136 | MS.gene051776:intron | 30.0% | |
| TGGTACTAGCATAAATATGT+AGG | - | chr7.3:6658348-6658367 | None:intergenic | 30.0% | |
| TTAGTGGAATCAAGATCTTA+TGG | + | chr7.3:6658170-6658189 | MS.gene051776:CDS | 30.0% | |
| TTCATTATATGCAGGGAATT+CGG | + | chr7.3:6658064-6658083 | MS.gene051776:intron | 30.0% | |
| ! | ACACTCGTATACATTCTTTT+TGG | + | chr7.3:6658671-6658690 | MS.gene051776:CDS | 30.0% |
| ! | CACTCGTATACATTCTTTTT+GGG | + | chr7.3:6658672-6658691 | MS.gene051776:CDS | 30.0% |
| !! | TATAGATGCTTTGGAACATT+CGG | + | chr7.3:6658203-6658222 | MS.gene051776:CDS | 30.0% |
| !!! | ATGGCTGTTTTTTGTTTTGA+GGG | + | chr7.3:6658563-6658582 | MS.gene051776:CDS | 30.0% |
| !!! | TACATTCTTTTTGGGTTATG+TGG | + | chr7.3:6658680-6658699 | MS.gene051776:CDS | 30.0% |
| AGCTAAATTCCCAAAATTGC+TGG | + | chr7.3:6658628-6658647 | MS.gene051776:CDS | 35.0% | |
| AGCTTCAAAGCTTCAAACTT+TGG | + | chr7.3:6657380-6657399 | MS.gene051776:CDS | 35.0% | |
| ATGCTAGTACCAGTTGAAAT+TGG | + | chr7.3:6658356-6658375 | MS.gene051776:CDS | 35.0% | |
| ATTGTTACTGTAGTTGGAAC+TGG | + | chr7.3:6657411-6657430 | MS.gene051776:CDS | 35.0% | |
| CGTGATGCATTTATTGATCT+TGG | + | chr7.3:6657950-6657969 | MS.gene051776:intron | 35.0% | |
| CTTCAAAGCTTCAAACTTTG+GGG | + | chr7.3:6657382-6657401 | MS.gene051776:CDS | 35.0% | |
| GCATAGAATTTGATTCAGGT+AGG | + | chr7.3:6657639-6657658 | MS.gene051776:intron | 35.0% | |
| GCTTCAAAGCTTCAAACTTT+GGG | + | chr7.3:6657381-6657400 | MS.gene051776:CDS | 35.0% | |
| TCCCTGCATATAATGAAACT+CGG | - | chr7.3:6658061-6658080 | None:intergenic | 35.0% | |
| TCCGAGTTTCATTATATGCA+GGG | + | chr7.3:6658057-6658076 | MS.gene051776:intron | 35.0% | |
| TGCTAGTACCAGTTGAAATT+GGG | + | chr7.3:6658357-6658376 | MS.gene051776:CDS | 35.0% | |
| ! | AAGTAGGAGCATGCAATAAT+AGG | - | chr7.3:6657517-6657536 | None:intergenic | 35.0% |
| ! | ATGGGTTTTCGTTTAGAGAA+AGG | + | chr7.3:6658495-6658514 | MS.gene051776:CDS | 35.0% |
| ! | GTTTTCGTTTAGAGAAAGGA+CGG | + | chr7.3:6658499-6658518 | MS.gene051776:CDS | 35.0% |
| ! | TTATGTGGTTACATGGCTTT+TGG | + | chr7.3:6658695-6658714 | MS.gene051776:CDS | 35.0% |
| !!! | CATGGCTGTTTTTTGTTTTG+AGG | + | chr7.3:6658562-6658581 | MS.gene051776:CDS | 35.0% |
| !!! | GTTTTTTGTTTTGAGGGGTT+TGG | + | chr7.3:6658569-6658588 | MS.gene051776:CDS | 35.0% |
| !!! | TGGCTGTTTTTTGTTTTGAG+GGG | + | chr7.3:6658564-6658583 | MS.gene051776:CDS | 35.0% |
| !!! | TTTTGGGTTATGTGGTTACA+TGG | + | chr7.3:6658688-6658707 | MS.gene051776:CDS | 35.0% |
| AAACGAAAACCCATCCTCTA+AGG | - | chr7.3:6658489-6658508 | None:intergenic | 40.0% | |
| AGCTATGGGAATTGTAGTGA+AGG | + | chr7.3:6658448-6658467 | MS.gene051776:CDS | 40.0% | |
| ATCAAGATCTTATGGAGACC+TGG | + | chr7.3:6658178-6658197 | MS.gene051776:CDS | 40.0% | |
| ATTAAGGGTCACAATGTCTC+TGG | - | chr7.3:6658729-6658748 | None:intergenic | 40.0% | |
| CAGTTGAAATTGGGATGTCA+TGG | + | chr7.3:6658366-6658385 | MS.gene051776:CDS | 40.0% | |
| CATGACATCCCAATTTCAAC+TGG | - | chr7.3:6658368-6658387 | None:intergenic | 40.0% | |
| CTCCGAGTTTCATTATATGC+AGG | + | chr7.3:6658056-6658075 | MS.gene051776:intron | 40.0% | |
| GAAATTGGGATGTCATGGAT+AGG | + | chr7.3:6658371-6658390 | MS.gene051776:CDS | 40.0% | |
| GCATCACGCATAATAATGGT+AGG | - | chr7.3:6657938-6657957 | None:intergenic | 40.0% | |
| TAGAAAGATGACCCACAAGT+AGG | - | chr7.3:6657533-6657552 | None:intergenic | 40.0% | |
| TATTGCATGCTCCTACTTGT+GGG | + | chr7.3:6657519-6657538 | MS.gene051776:intron | 40.0% | |
| TCAAGATCTTATGGAGACCT+GGG | + | chr7.3:6658179-6658198 | MS.gene051776:CDS | 40.0% | |
| TCACTACAATTCCCATAGCT+AGG | - | chr7.3:6658448-6658467 | None:intergenic | 40.0% | |
| TGCCCTAGAGAATTCTATGA+AGG | + | chr7.3:6658601-6658620 | MS.gene051776:CDS | 40.0% | |
| TTATTGCATGCTCCTACTTG+TGG | + | chr7.3:6657518-6657537 | MS.gene051776:intron | 40.0% | |
| ! | AAAGTCTGAGCCAGCAATTT+TGG | - | chr7.3:6658641-6658660 | None:intergenic | 40.0% |
| ! | AAGTCTGAGCCAGCAATTTT+GGG | - | chr7.3:6658640-6658659 | None:intergenic | 40.0% |
| ! | CAAGCGATGGTCCATATTTT+TGG | - | chr7.3:6658322-6658341 | None:intergenic | 40.0% |
| ! | GTAGTTGGAACTGGTGTTTT+GGG | + | chr7.3:6657420-6657439 | MS.gene051776:CDS | 40.0% |
| ! | TGTAGTTGGAACTGGTGTTT+TGG | + | chr7.3:6657419-6657438 | MS.gene051776:CDS | 40.0% |
| ! | TGTTGTGTACTTCACTGACT+TGG | + | chr7.3:6657835-6657854 | MS.gene051776:intron | 40.0% |
| ! | TTCCAAAGCATCTATAACCC+AGG | - | chr7.3:6658199-6658218 | None:intergenic | 40.0% |
| !! | CTCAGTCATCGATTTCAGAT+CGG | - | chr7.3:6658018-6658037 | None:intergenic | 40.0% |
| !! | TGGGTTTACCCTTTGCTTTT+CGG | + | chr7.3:6657439-6657458 | MS.gene051776:CDS | 40.0% |
| AATATGTAGGAGGCAAGCGA+TGG | - | chr7.3:6658335-6658354 | None:intergenic | 45.0% | |
| ACCAGCAATCCGAAAAGCAA+AGG | - | chr7.3:6657451-6657470 | None:intergenic | 45.0% | |
| AGTGAAGGAAGATGTACGAG+TGG | + | chr7.3:6658463-6658482 | MS.gene051776:CDS | 45.0% | |
| CCAGCAATCCGAAAAGCAAA+GGG | - | chr7.3:6657450-6657469 | None:intergenic | 45.0% | |
| GACCTGGGTTATAGATGCTT+TGG | + | chr7.3:6658194-6658213 | MS.gene051776:CDS | 45.0% | |
| GGCTATAGCTCAGATAGCTT+TGG | + | chr7.3:6657672-6657691 | MS.gene051776:intron | 45.0% | |
| GTGTGCAATGTCCTAGCTAT+GGG | + | chr7.3:6658434-6658453 | MS.gene051776:CDS | 45.0% | |
| TGCAGGATCTGTTGCGTATT+TGG | + | chr7.3:6658265-6658284 | MS.gene051776:CDS | 45.0% | |
| TGTGTGCAATGTCCTAGCTA+TGG | + | chr7.3:6658433-6658452 | MS.gene051776:CDS | 45.0% | |
| TTGTGACCCTTAATCTCCCT+AGG | + | chr7.3:6658735-6658754 | MS.gene051776:CDS | 45.0% | |
| ! | GTTCTCGAGTTGTCATTGCA+TGG | + | chr7.3:6658086-6658105 | MS.gene051776:intron | 45.0% |
| !! | GGTTTGGTGCAGAGATAAGT+TGG | + | chr7.3:6658133-6658152 | MS.gene051776:intron | 45.0% |
| !! | TGCTTTTCGGATTGCTGGTT+GGG | + | chr7.3:6657452-6657471 | MS.gene051776:CDS | 45.0% |
| !! | TTGCTTTTCGGATTGCTGGT+TGG | + | chr7.3:6657451-6657470 | MS.gene051776:CDS | 45.0% |
| !!! | TTGCTGGCTCAGACTTTTAG+TGG | + | chr7.3:6658644-6658663 | MS.gene051776:CDS | 45.0% |
| ACCAGCTCCTAGGGAGATTA+AGG | - | chr7.3:6658745-6658764 | None:intergenic | 50.0% | |
| ACGGCAATCACGTCGAACAT+TGG | + | chr7.3:6658518-6658537 | MS.gene051776:CDS | 50.0% | |
| ATCGTGGTAGCACAATGTGC+AGG | + | chr7.3:6658248-6658267 | MS.gene051776:CDS | 50.0% | |
| CAAGAGATGACCAGCTCCTA+GGG | - | chr7.3:6658754-6658773 | None:intergenic | 50.0% | |
| CAATCACGTCGAACATTGGG+GGG | + | chr7.3:6658522-6658541 | MS.gene051776:CDS | 50.0% | |
| CCAGCTCCTAGGGAGATTAA+GGG | - | chr7.3:6658744-6658763 | None:intergenic | 50.0% | |
| CGGCAATCACGTCGAACATT+GGG | + | chr7.3:6658519-6658538 | MS.gene051776:CDS | 50.0% | |
| GCAATCACGTCGAACATTGG+GGG | + | chr7.3:6658521-6658540 | MS.gene051776:CDS | 50.0% | |
| GGCAATCACGTCGAACATTG+GGG | + | chr7.3:6658520-6658539 | MS.gene051776:CDS | 50.0% | |
| ! | AGATGTACGAGTGGCCTTAG+AGG | + | chr7.3:6658472-6658491 | MS.gene051776:CDS | 50.0% |
| ! | TACGAGTGGCCTTAGAGGAT+GGG | + | chr7.3:6658477-6658496 | MS.gene051776:CDS | 50.0% |
| !! | CCCTTTGCTTTTCGGATTGC+TGG | + | chr7.3:6657447-6657466 | MS.gene051776:CDS | 50.0% |
| !! | GATGCTTTGGAACATTCGGC+CGG | + | chr7.3:6658207-6658226 | MS.gene051776:CDS | 50.0% |
| !! | TCGCTTGGTGTTGCTATCGT+TGG | + | chr7.3:6657483-6657502 | MS.gene051776:CDS | 50.0% |
| ACAGCCATGCCTGCTGCAAA+TGG | - | chr7.3:6658551-6658570 | None:intergenic | 55.0% | |
| CCCTTAATCTCCCTAGGAGC+TGG | + | chr7.3:6658741-6658760 | MS.gene051776:CDS | 55.0% | |
| GCAAGAGATGACCAGCTCCT+AGG | - | chr7.3:6658755-6658774 | None:intergenic | 55.0% | |
| GGCATCAGAAGAGCCGTTAG+TGG | + | chr7.3:6658154-6658173 | MS.gene051776:CDS | 55.0% | |
| ! | GTACGAGTGGCCTTAGAGGA+TGG | + | chr7.3:6658476-6658495 | MS.gene051776:CDS | 55.0% |
| ! | GTTGCCATTTGCAGCAGGCA+TGG | + | chr7.3:6658544-6658563 | MS.gene051776:CDS | 55.0% |
| ! | CGGATTGCTGGTTGGGTTGC+TGG | + | chr7.3:6657459-6657478 | MS.gene051776:CDS | 60.0% |
| ! | GGGGGGTTGCCATTTGCAGC+AGG | + | chr7.3:6658539-6658558 | MS.gene051776:CDS | 65.0% |
| !! | GGTTGGGTTGCTGGCTCGCT+TGG | + | chr7.3:6657468-6657487 | MS.gene051776:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 6657380 | 6658781 | 6657380 | ID=MS.gene051776 |
| chr7.3 | mRNA | 6657380 | 6658781 | 6657380 | ID=MS.gene051776.t1;Parent=MS.gene051776 |
| chr7.3 | exon | 6657380 | 6657536 | 6657380 | ID=MS.gene051776.t1.exon1;Parent=MS.gene051776.t1 |
| chr7.3 | CDS | 6657380 | 6657536 | 6657380 | ID=cds.MS.gene051776.t1;Parent=MS.gene051776.t1 |
| chr7.3 | exon | 6658134 | 6658781 | 6658134 | ID=MS.gene051776.t1.exon2;Parent=MS.gene051776.t1 |
| chr7.3 | CDS | 6658134 | 6658781 | 6658134 | ID=cds.MS.gene051776.t1;Parent=MS.gene051776.t1 |
| Gene Sequence |
| Protein sequence |
