Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051894.t1 | XP_013450261.1 | 93.8 | 480 | 23 | 1 | 1 | 480 | 1 | 473 | 3.00E-248 | 867.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051894.t1 | E9L7A5 | 76.1 | 465 | 103 | 3 | 14 | 474 | 13 | 473 | 3.3e-195 | 682.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051894.t1 | A0A072U3J0 | 93.8 | 480 | 23 | 1 | 1 | 480 | 1 | 473 | 2.1e-248 | 867.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051773 | MS.gene051894 | 0.947847 | 3.03E-106 | -1.69E-46 |
| MS.gene051894 | MS.gene23066 | 0.898829 | 3.62E-77 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene051894 | MS.gene031869 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051894.t1 | MTR_7g106830 | 93.750 | 480 | 23 | 1 | 1 | 480 | 1 | 473 | 0.0 | 920 |
| MS.gene051894.t1 | MTR_8g091280 | 84.440 | 482 | 66 | 3 | 1 | 480 | 1 | 475 | 0.0 | 821 |
| MS.gene051894.t1 | MTR_1807s0010 | 38.046 | 389 | 237 | 2 | 80 | 467 | 7 | 392 | 2.97e-82 | 260 |
| MS.gene051894.t1 | MTR_3g072670 | 30.513 | 390 | 247 | 10 | 88 | 471 | 72 | 443 | 2.81e-51 | 180 |
| MS.gene051894.t1 | MTR_3g072680 | 30.189 | 371 | 237 | 9 | 107 | 471 | 46 | 400 | 1.47e-49 | 174 |
| MS.gene051894.t1 | MTR_4g011820 | 29.944 | 354 | 219 | 9 | 135 | 480 | 62 | 394 | 1.91e-42 | 155 |
| MS.gene051894.t1 | MTR_1g087760 | 32.376 | 383 | 223 | 11 | 107 | 471 | 30 | 394 | 4.78e-42 | 154 |
| MS.gene051894.t1 | MTR_3g072690 | 29.290 | 338 | 183 | 9 | 107 | 442 | 11 | 294 | 5.95e-36 | 135 |
| MS.gene051894.t1 | MTR_8g061360 | 23.280 | 378 | 263 | 10 | 106 | 468 | 42 | 407 | 4.90e-21 | 95.5 |
| MS.gene051894.t1 | MTR_2g008430 | 24.923 | 325 | 206 | 11 | 106 | 405 | 72 | 383 | 8.58e-17 | 82.8 |
| MS.gene051894.t1 | MTR_8g098930 | 21.763 | 363 | 247 | 14 | 142 | 480 | 95 | 444 | 1.33e-16 | 82.4 |
| MS.gene051894.t1 | MTR_2g090615 | 22.888 | 367 | 258 | 10 | 114 | 468 | 57 | 410 | 2.85e-16 | 81.3 |
| MS.gene051894.t1 | MTR_4g092620 | 24.923 | 325 | 206 | 11 | 106 | 405 | 91 | 402 | 5.08e-14 | 74.3 |
| MS.gene051894.t1 | MTR_8g101820 | 21.392 | 388 | 267 | 15 | 102 | 471 | 46 | 413 | 1.36e-12 | 69.7 |
| MS.gene051894.t1 | MTR_6g463260 | 21.024 | 371 | 263 | 13 | 120 | 471 | 166 | 525 | 7.87e-12 | 67.8 |
| MS.gene051894.t1 | MTR_4g097540 | 18.873 | 355 | 256 | 9 | 146 | 475 | 91 | 438 | 8.78e-12 | 67.4 |
| MS.gene051894.t1 | MTR_7g079080 | 23.005 | 213 | 149 | 5 | 142 | 340 | 94 | 305 | 2.72e-11 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051894.t1 | AT2G22250 | 73.349 | 424 | 110 | 2 | 53 | 474 | 47 | 469 | 0.0 | 641 |
| MS.gene051894.t1 | AT2G22250 | 73.349 | 424 | 110 | 2 | 53 | 474 | 47 | 469 | 0.0 | 641 |
| MS.gene051894.t1 | AT2G22250 | 75.871 | 402 | 97 | 0 | 73 | 474 | 21 | 422 | 0.0 | 640 |
| MS.gene051894.t1 | AT1G77670 | 29.612 | 412 | 263 | 11 | 66 | 471 | 46 | 436 | 3.54e-55 | 191 |
| MS.gene051894.t1 | AT1G80360 | 29.178 | 353 | 218 | 10 | 137 | 480 | 64 | 393 | 1.40e-38 | 145 |
| MS.gene051894.t1 | AT1G80360 | 29.178 | 353 | 218 | 10 | 137 | 480 | 64 | 393 | 1.40e-38 | 145 |
| MS.gene051894.t1 | AT1G80360 | 29.178 | 353 | 218 | 10 | 137 | 480 | 64 | 393 | 1.40e-38 | 145 |
| MS.gene051894.t1 | AT1G80360 | 29.178 | 353 | 218 | 10 | 137 | 480 | 64 | 393 | 1.40e-38 | 145 |
| MS.gene051894.t1 | AT4G28420 | 23.404 | 376 | 265 | 9 | 105 | 467 | 61 | 426 | 6.53e-24 | 104 |
| MS.gene051894.t1 | AT5G36160 | 21.622 | 407 | 285 | 9 | 84 | 469 | 17 | 410 | 2.72e-21 | 96.3 |
| MS.gene051894.t1 | AT5G53970 | 21.636 | 379 | 278 | 6 | 101 | 468 | 30 | 400 | 1.00e-19 | 91.7 |
| MS.gene051894.t1 | AT2G20610 | 22.802 | 364 | 262 | 8 | 114 | 468 | 80 | 433 | 4.29e-19 | 90.1 |
| MS.gene051894.t1 | AT2G24850 | 23.055 | 347 | 236 | 11 | 137 | 468 | 87 | 417 | 6.39e-19 | 89.4 |
| MS.gene051894.t1 | AT4G28420 | 22.756 | 312 | 224 | 8 | 105 | 403 | 61 | 368 | 1.08e-18 | 88.2 |
| MS.gene051894.t1 | AT4G28410 | 22.164 | 379 | 246 | 12 | 114 | 468 | 82 | 435 | 1.55e-16 | 82.0 |
| MS.gene051894.t1 | AT1G01480 | 27.650 | 217 | 136 | 6 | 142 | 340 | 95 | 308 | 1.91e-16 | 82.0 |
| MS.gene051894.t1 | AT4G23600 | 21.270 | 315 | 210 | 10 | 172 | 468 | 4 | 298 | 3.68e-15 | 76.6 |
| MS.gene051894.t1 | AT2G13810 | 23.155 | 393 | 250 | 12 | 104 | 469 | 70 | 437 | 8.01e-15 | 77.0 |
| MS.gene051894.t1 | AT2G20610 | 22.647 | 340 | 238 | 9 | 114 | 441 | 80 | 406 | 1.34e-14 | 76.3 |
| MS.gene051894.t1 | AT5G51690 | 22.884 | 319 | 225 | 10 | 137 | 442 | 25 | 335 | 1.50e-14 | 75.5 |
| MS.gene051894.t1 | AT5G51690 | 22.884 | 319 | 225 | 10 | 137 | 442 | 148 | 458 | 2.66e-14 | 75.5 |
| MS.gene051894.t1 | AT4G28410 | 21.849 | 357 | 230 | 10 | 114 | 457 | 82 | 402 | 2.92e-14 | 75.1 |
| MS.gene051894.t1 | AT1G01480 | 26.904 | 197 | 125 | 5 | 160 | 340 | 9 | 202 | 4.59e-14 | 74.3 |
| MS.gene051894.t1 | AT4G23590 | 19.469 | 339 | 237 | 10 | 147 | 468 | 83 | 402 | 4.74e-14 | 74.3 |
| MS.gene051894.t1 | AT4G33680 | 24.308 | 325 | 208 | 11 | 106 | 405 | 93 | 404 | 5.60e-14 | 74.3 |
| MS.gene051894.t1 | AT1G62960 | 24.096 | 332 | 215 | 13 | 133 | 442 | 202 | 518 | 3.05e-13 | 72.4 |
| MS.gene051894.t1 | AT4G08040 | 21.212 | 330 | 231 | 11 | 157 | 468 | 102 | 420 | 5.07e-13 | 71.2 |
| MS.gene051894.t1 | AT4G26200 | 21.490 | 349 | 246 | 11 | 142 | 471 | 102 | 441 | 4.26e-12 | 68.6 |
Find 122 sgRNAs with CRISPR-Local
Find 209 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTAGCCATCCTTGCCATTTC+TGG | 0.086449 | 7.1:-6234917 | None:intergenic |
| TCTTGACCTTTCACTTATTA+TGG | 0.141566 | 7.1:-6235008 | None:intergenic |
| GCAATTTGTCATAAACTAAA+AGG | 0.247543 | 7.1:+6234578 | MS.gene051894:CDS |
| TATTATGGATTCAAGAAGTT+TGG | 0.255108 | 7.1:-6234993 | None:intergenic |
| ATTGATTTCAGCTCCTATTA+TGG | 0.261186 | 7.1:+6236074 | MS.gene051894:CDS |
| TTGGGTGCTTTGCTACAATA+TGG | 0.279374 | 7.1:-6235102 | None:intergenic |
| TTCAGCTTCTCTTCCATAAT+AGG | 0.283252 | 7.1:-6236087 | None:intergenic |
| CAAGAAGTTTGGGATCTAAA+AGG | 0.290370 | 7.1:-6234982 | None:intergenic |
| TATTGAATTTAGTTTACTTC+GGG | 0.293177 | 7.1:+6235782 | MS.gene051894:intron |
| GGAAGAGAAGCTGAAGGTTT+TGG | 0.300530 | 7.1:+6236095 | MS.gene051894:CDS |
| TGGCGGCTTGGTTATATTGC+AGG | 0.312104 | 7.1:+6235512 | MS.gene051894:CDS |
| ATCTCTTCAAGTAATTTCTT+AGG | 0.314071 | 7.1:-6235076 | None:intergenic |
| ATGCTTGCAGTTTGCTCTCC+AGG | 0.323730 | 7.1:+6234763 | MS.gene051894:CDS |
| ATTCTAAAGTTCCCGCATTA+CGG | 0.328676 | 7.1:-6234547 | None:intergenic |
| AGCAAAGCACCCAAGGCTTT+TGG | 0.340366 | 7.1:+6235111 | MS.gene051894:CDS |
| ATGCTGAAATAAAATGTTTC+GGG | 0.353525 | 7.1:-6235535 | None:intergenic |
| CTTGTGCCAGGGAGTGCATC+TGG | 0.364335 | 7.1:+6236285 | MS.gene051894:CDS |
| ATTATGGATTCAAGAAGTTT+GGG | 0.364458 | 7.1:-6234992 | None:intergenic |
| TGTCAATATCTGTTGCATAA+AGG | 0.366152 | 7.1:+6236143 | MS.gene051894:CDS |
| GCCTCTCTCCACGTCTCTTT+CGG | 0.381502 | 7.1:+6233274 | MS.gene051894:CDS |
| CATGCTGAAATAAAATGTTT+CGG | 0.387560 | 7.1:-6235536 | None:intergenic |
| TAGCCATCCTTGCCATTTCT+GGG | 0.389312 | 7.1:-6234916 | None:intergenic |
| TTCTAAAGTTCCCGCATTAC+GGG | 0.394245 | 7.1:-6234546 | None:intergenic |
| CAGACTTTGCGGGGAGAGAT+TGG | 0.395759 | 7.1:-6233252 | None:intergenic |
| CCAGCCGCCAAGAGAATAAC+AGG | 0.395883 | 7.1:-6233511 | None:intergenic |
| AGGCGTTCCTGTTATTCTCT+TGG | 0.401942 | 7.1:+6233504 | MS.gene051894:CDS |
| CTACAGGTCGCACTTGTGCC+AGG | 0.411505 | 7.1:+6236273 | MS.gene051894:intron |
| ACAAGTGCAGCTGAGGTAAG+AGG | 0.413408 | 7.1:-6236393 | None:intergenic |
| TGGAGAGAGGCAGACTTTGC+GGG | 0.421746 | 7.1:-6233262 | None:intergenic |
| CTGCAGCCCTTTGCAATGAC+TGG | 0.426334 | 7.1:+6235488 | MS.gene051894:intron |
| CTATGTTAGTTACCCAGAAA+TGG | 0.430251 | 7.1:+6234904 | MS.gene051894:CDS |
| AAAGCTGCAGTTGCTGCATC+AGG | 0.433618 | 7.1:+6235824 | MS.gene051894:CDS |
| TATAACTTTACCAAAAGCCT+TGG | 0.435701 | 7.1:-6235121 | None:intergenic |
| GCAATGACTGGTTGGCGGCT+TGG | 0.436164 | 7.1:+6235500 | MS.gene051894:CDS |
| CCTGTTATTCTCTTGGCGGC+TGG | 0.440530 | 7.1:+6233511 | MS.gene051894:CDS |
| TGCTTGCAGTTTGCTCTCCA+GGG | 0.440573 | 7.1:+6234764 | MS.gene051894:CDS |
| GCAAAGCTAGTGTGTGTTGC+TGG | 0.444438 | 7.1:-6235267 | None:intergenic |
| TCAATGCTGTGAAACCTTCA+AGG | 0.445837 | 7.1:+6233440 | MS.gene051894:CDS |
| TTATTGAATTTAGTTTACTT+CGG | 0.446135 | 7.1:+6235781 | MS.gene051894:intron |
| ATGTGGAAAGATTCAAAGTC+AGG | 0.449025 | 7.1:+6235556 | MS.gene051894:CDS |
| GTGGAGAGAGGCAGACTTTG+CGG | 0.454753 | 7.1:-6233263 | None:intergenic |
| TAAATCATCATTATCAGAAA+CGG | 0.458616 | 7.1:-6233389 | None:intergenic |
| TTAGTTTATGACAAATTGCT+TGG | 0.459042 | 7.1:-6234574 | None:intergenic |
| AACCTTAGAAAATCCATTCA+CGG | 0.462409 | 7.1:-6235322 | None:intergenic |
| GTTATAGACACAGTCCTTGA+AGG | 0.462583 | 7.1:-6233454 | None:intergenic |
| ACAGCAGGTGTATCAAAATC+AGG | 0.465547 | 7.1:-6233538 | None:intergenic |
| GCAGTTGCTGCATCAGGACT+AGG | 0.466446 | 7.1:+6235830 | MS.gene051894:CDS |
| TGCCTGAGCAATACTCTGCT+TGG | 0.472297 | 7.1:-6234740 | None:intergenic |
| GATCAGATTATTGTTAGTAA+TGG | 0.476011 | 7.1:+6234715 | MS.gene051894:CDS |
| ACAGATCCTGTCGGGTTAGA+CGG | 0.476864 | 7.1:-6235049 | None:intergenic |
| TCTCTCTACAGCTGCCTGTA+GGG | 0.480917 | 7.1:-6236352 | None:intergenic |
| GATAAAACGCTAACCGTGAA+TGG | 0.483375 | 7.1:+6235309 | MS.gene051894:CDS |
| AGTTTGCTCTCCAGGGGATG+AGG | 0.487625 | 7.1:+6234771 | MS.gene051894:CDS |
| TGGGTGCTTTGCTACAATAT+GGG | 0.487759 | 7.1:-6235101 | None:intergenic |
| GCATCAGGACTAGGCTATGC+TGG | 0.488598 | 7.1:+6235839 | MS.gene051894:CDS |
| AAGGATTCACACCTGTGGTT+CGG | 0.490759 | 7.1:-6235954 | None:intergenic |
| TCTGGGTAACTAACATAGAA+TGG | 0.491015 | 7.1:-6234899 | None:intergenic |
| ATTGACGTTGGAAGGATAAC+GGG | 0.491897 | 7.1:-6234947 | None:intergenic |
| CGTTCCTGTTATTCTCTTGG+CGG | 0.495894 | 7.1:+6233507 | MS.gene051894:CDS |
| TAGAGAACGAAGGAATTACT+TGG | 0.497722 | 7.1:+6235895 | MS.gene051894:CDS |
| CGCCAACCAGTCATTGCAAA+GGG | 0.498469 | 7.1:-6235494 | None:intergenic |
| CCTTTGCAATGACTGGTTGG+CGG | 0.506213 | 7.1:+6235495 | MS.gene051894:CDS |
| TCGTCTCCAGATGCACTCCC+TGG | 0.507721 | 7.1:-6236291 | None:intergenic |
| TAACTAACATAGAATGGAGC+TGG | 0.508014 | 7.1:-6234893 | None:intergenic |
| TATCAGATATTGACGTTGGA+AGG | 0.508504 | 7.1:-6234955 | None:intergenic |
| TAGGATAGACAGATCCTGTC+GGG | 0.509644 | 7.1:-6235057 | None:intergenic |
| ACTAGCTTTGCATCTTTACC+TGG | 0.509818 | 7.1:+6235279 | MS.gene051894:CDS |
| ATAACTTTACCAAAAGCCTT+GGG | 0.511183 | 7.1:-6235120 | None:intergenic |
| AGTACTGTAAAATATGTTGT+TGG | 0.516836 | 7.1:+6233322 | MS.gene051894:CDS |
| CCTTTACTCACCTCATCCCC+TGG | 0.518226 | 7.1:-6234781 | None:intergenic |
| TATTGACGTTGGAAGGATAA+CGG | 0.518343 | 7.1:-6234948 | None:intergenic |
| TGCATCTTTACCTGGAATGT+GGG | 0.520471 | 7.1:+6235287 | MS.gene051894:CDS |
| TTGCATCTTTACCTGGAATG+TGG | 0.521651 | 7.1:+6235286 | MS.gene051894:CDS |
| AGCATCTCTTCCTACCCTAC+AGG | 0.523160 | 7.1:+6236338 | MS.gene051894:CDS |
| GCCACCGCTCTTGTTCAAGC+AGG | 0.531444 | 7.1:+6233484 | MS.gene051894:CDS |
| AGCCCTTTGCAATGACTGGT+TGG | 0.531466 | 7.1:+6235492 | MS.gene051894:intron |
| ACAAGGTACACCCGTAATGC+GGG | 0.533223 | 7.1:+6234536 | MS.gene051894:CDS |
| TACACCTGCTGTCATAGCTC+AGG | 0.536347 | 7.1:+6233549 | MS.gene051894:CDS |
| AGCCAAGCAGAGTATTGCTC+AGG | 0.549115 | 7.1:+6234738 | MS.gene051894:CDS |
| TGTTCGCCGTCTAACCCGAC+AGG | 0.550345 | 7.1:+6235043 | MS.gene051894:CDS |
| CAAGTGCAGCTGAGGTAAGA+GGG | 0.556805 | 7.1:-6236392 | None:intergenic |
| AAATTATCAGATATTGACGT+TGG | 0.562680 | 7.1:-6234959 | None:intergenic |
| ATATCTGTTGCATAAAGGCC+AGG | 0.563043 | 7.1:+6236148 | MS.gene051894:CDS |
| TACAGGTCGCACTTGTGCCA+GGG | 0.565282 | 7.1:+6236274 | MS.gene051894:intron |
| TTCTCTCTACAGCTGCCTGT+AGG | 0.565977 | 7.1:-6236353 | None:intergenic |
| GCTTGCAGTTTGCTCTCCAG+GGG | 0.566776 | 7.1:+6234765 | MS.gene051894:CDS |
| TTATATAACAACACCACATG+TGG | 0.567338 | 7.1:+6233214 | MS.gene051894:CDS |
| TTACCCAGAAATGGCAAGGA+TGG | 0.570545 | 7.1:+6234913 | MS.gene051894:CDS |
| TCTACAGCTGCCTGTAGGGT+AGG | 0.574697 | 7.1:-6236348 | None:intergenic |
| AGCTTTCTGAGATATACTAC+TGG | 0.576070 | 7.1:-6235807 | None:intergenic |
| ATTGAATTTAGTTTACTTCG+GGG | 0.577826 | 7.1:+6235783 | MS.gene051894:intron |
| GGTGTTGTTATATAACATGT+TGG | 0.577834 | 7.1:-6233206 | None:intergenic |
| TTGAATCCATAATAAGTGAA+AGG | 0.578044 | 7.1:+6235002 | MS.gene051894:CDS |
| GGGATTAATGCAATTCATGA+AGG | 0.585738 | 7.1:+6234509 | MS.gene051894:CDS |
| GGTTTCACAGCATTGACTCG+TGG | 0.588407 | 7.1:-6233433 | None:intergenic |
| CACAAGGTACACCCGTAATG+CGG | 0.593712 | 7.1:+6234535 | MS.gene051894:CDS |
| GGAGAGAGGCAGACTTTGCG+GGG | 0.594917 | 7.1:-6233261 | None:intergenic |
| GGAGTGGAGCAGAACAGAAG+AGG | 0.596530 | 7.1:+6233343 | MS.gene051894:CDS |
| CCGCCAACCAGTCATTGCAA+AGG | 0.598202 | 7.1:-6235495 | None:intergenic |
| TGTTGAAATATCCGAACCAC+AGG | 0.604423 | 7.1:+6235943 | MS.gene051894:CDS |
| CAGACCTGAGCTATGACAGC+AGG | 0.609037 | 7.1:-6233553 | None:intergenic |
| GCCGAAAGAGACGTGGAGAG+AGG | 0.610172 | 7.1:-6233275 | None:intergenic |
| TATTATGGAAGAGAAGCTGA+AGG | 0.610603 | 7.1:+6236089 | MS.gene051894:CDS |
| TTGAATTTAGTTTACTTCGG+GGG | 0.612433 | 7.1:+6235784 | MS.gene051894:intron |
| TGTAAAATATGTTGTTGGAG+TGG | 0.614667 | 7.1:+6233327 | MS.gene051894:CDS |
| ACACTAGACAAGTGCAGCTG+AGG | 0.616702 | 7.1:-6236400 | None:intergenic |
| ATATTGTAGCAAAGCACCCA+AGG | 0.617688 | 7.1:+6235104 | MS.gene051894:CDS |
| TTAGGATAGACAGATCCTGT+CGG | 0.618575 | 7.1:-6235058 | None:intergenic |
| TTGCGGGGAGAGATTGGTGA+GGG | 0.619268 | 7.1:-6233246 | None:intergenic |
| ACTAGGCTATGCTGGTGGAG+AGG | 0.620996 | 7.1:+6235847 | MS.gene051894:CDS |
| GTTGTTATATAACATGTTGG+TGG | 0.621331 | 7.1:-6233203 | None:intergenic |
| TTAGTTACCCAGAAATGGCA+AGG | 0.624335 | 7.1:+6234909 | MS.gene051894:CDS |
| GGTTTGAGCCGAAAGAGACG+TGG | 0.630579 | 7.1:-6233282 | None:intergenic |
| TTCTCTAAATGCTTTCACCA+TGG | 0.638071 | 7.1:-6235879 | None:intergenic |
| TGGAGAGGTTGTTTCTACCA+TGG | 0.638313 | 7.1:+6235862 | MS.gene051894:CDS |
| GCCTGCTTGAACAAGAGCGG+TGG | 0.640534 | 7.1:-6233485 | None:intergenic |
| AGGGAAAGAGATTCCACATG+TGG | 0.649668 | 7.1:-6233227 | None:intergenic |
| TCAGGACTAGGCTATGCTGG+TGG | 0.663983 | 7.1:+6235842 | MS.gene051894:CDS |
| AACGCCTGCTTGAACAAGAG+CGG | 0.668953 | 7.1:-6233488 | None:intergenic |
| TTTGCGGGGAGAGATTGGTG+AGG | 0.672165 | 7.1:-6233247 | None:intergenic |
| TGAAAGCATTTAGAGAACGA+AGG | 0.676649 | 7.1:+6235885 | MS.gene051894:CDS |
| CAATTCATGAAGGACACACA+AGG | 0.683946 | 7.1:+6234519 | MS.gene051894:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTGATATTATATTATATG+CGG | + | chr7.1:6235738-6235757 | MS.gene051894:intron | 10.0% |
| !! | TATAAATTATGAAATAAACT+TGG | + | chr7.1:6235436-6235455 | MS.gene051894:intron | 10.0% |
| !! | AAATCAACATCTAATATTAT+CGG | - | chr7.1:6234637-6234656 | None:intergenic | 15.0% |
| !! | CAATTTACAAAAGAAAATAA+TGG | - | chr7.1:6233973-6233992 | None:intergenic | 15.0% |
| !!! | TTATTGAATTTAGTTTACTT+CGG | + | chr7.1:6235781-6235800 | MS.gene051894:intron | 15.0% |
| !! | AAAAAAAAATTAGAAGCCTT+AGG | - | chr7.1:6235467-6235486 | None:intergenic | 20.0% |
| !! | ACGAATATGGTTAAAATTAA+AGG | - | chr7.1:6235673-6235692 | None:intergenic | 20.0% |
| !! | ATGATGATATAAGTTATGTT+TGG | + | chr7.1:6234192-6234211 | MS.gene051894:intron | 20.0% |
| !! | CGAATATGGTTAAAATTAAA+GGG | - | chr7.1:6235672-6235691 | None:intergenic | 20.0% |
| !! | TAAATCATCATTATCAGAAA+CGG | - | chr7.1:6233392-6233411 | None:intergenic | 20.0% |
| !! | TATTTGTATCGAATACATAT+TGG | + | chr7.1:6233657-6233676 | MS.gene051894:intron | 20.0% |
| !! | TCATAATTTATAACCATACT+AGG | - | chr7.1:6235428-6235447 | None:intergenic | 20.0% |
| !!! | TATTGAATTTAGTTTACTTC+GGG | + | chr7.1:6235782-6235801 | MS.gene051894:intron | 20.0% |
| !!! | TGTTTAGTTAAGTTGTTTAT+TGG | + | chr7.1:6234445-6234464 | MS.gene051894:intron | 20.0% |
| ! | AAATTATCAGATATTGACGT+TGG | - | chr7.1:6234962-6234981 | None:intergenic | 25.0% |
| ! | AGTACTGTAAAATATGTTGT+TGG | + | chr7.1:6233322-6233341 | MS.gene051894:CDS | 25.0% |
| ! | ATAAGATGAAGCTTAGAATA+CGG | - | chr7.1:6235608-6235627 | None:intergenic | 25.0% |
| ! | ATACATATGTGAGAAATTAG+TGG | + | chr7.1:6233790-6233809 | MS.gene051894:intron | 25.0% |
| ! | ATCTATGATACCAATATTTC+AGG | + | chr7.1:6234862-6234881 | MS.gene051894:intron | 25.0% |
| ! | ATCTCTTCAAGTAATTTCTT+AGG | - | chr7.1:6235079-6235098 | None:intergenic | 25.0% |
| ! | ATGCTGAAATAAAATGTTTC+GGG | - | chr7.1:6235538-6235557 | None:intergenic | 25.0% |
| ! | ATTATGGATTCAAGAAGTTT+GGG | - | chr7.1:6234995-6235014 | None:intergenic | 25.0% |
| ! | CATGCTGAAATAAAATGTTT+CGG | - | chr7.1:6235539-6235558 | None:intergenic | 25.0% |
| ! | CCAGTAAATAAGTTCAAATA+AGG | - | chr7.1:6234222-6234241 | None:intergenic | 25.0% |
| ! | GATCAGATTATTGTTAGTAA+TGG | + | chr7.1:6234715-6234734 | MS.gene051894:CDS | 25.0% |
| ! | GCAATTTGTCATAAACTAAA+AGG | + | chr7.1:6234578-6234597 | MS.gene051894:CDS | 25.0% |
| ! | TAAAGTTATACTTCTCTGAT+GGG | + | chr7.1:6235134-6235153 | MS.gene051894:intron | 25.0% |
| ! | TATTATGGATTCAAGAAGTT+TGG | - | chr7.1:6234996-6235015 | None:intergenic | 25.0% |
| ! | TCACTCTTAAATAACGAATA+TGG | - | chr7.1:6235686-6235705 | None:intergenic | 25.0% |
| ! | TTAGTTTATGACAAATTGCT+TGG | - | chr7.1:6234577-6234596 | None:intergenic | 25.0% |
| ! | TTGAATCCATAATAAGTGAA+AGG | + | chr7.1:6235002-6235021 | MS.gene051894:CDS | 25.0% |
| !! | AACATATTTTACAGTACTGT+GGG | - | chr7.1:6233320-6233339 | None:intergenic | 25.0% |
| !! | ATTGAATTTAGTTTACTTCG+GGG | + | chr7.1:6235783-6235802 | MS.gene051894:intron | 25.0% |
| !! | CCTTATTTGAACTTATTTAC+TGG | + | chr7.1:6234219-6234238 | MS.gene051894:intron | 25.0% |
| !! | GTTAGTTTGATTGTATTGTA+TGG | + | chr7.1:6234600-6234619 | MS.gene051894:intron | 25.0% |
| !! | TCTGCAAAATCAATCAATTT+TGG | - | chr7.1:6234670-6234689 | None:intergenic | 25.0% |
| !! | TCTTATAGCTTGTATGAAAA+CGG | + | chr7.1:6234346-6234365 | MS.gene051894:intron | 25.0% |
| !! | TTAAGTTGTTTATTGGAACA+TGG | + | chr7.1:6234452-6234471 | MS.gene051894:intron | 25.0% |
| !!! | AAAATTGATTGATTTTGCAG+AGG | + | chr7.1:6234669-6234688 | MS.gene051894:intron | 25.0% |
| !!! | AAACATTTTATTTCAGCATG+TGG | + | chr7.1:6235539-6235558 | MS.gene051894:CDS | 25.0% |
| !!! | ACAGCTTTTAAGATTTTAAG+TGG | - | chr7.1:6235199-6235218 | None:intergenic | 25.0% |
| !!! | CTTCAAAAAGTGTATTTTAC+TGG | + | chr7.1:6233726-6233745 | MS.gene051894:intron | 25.0% |
| !!! | TTTTATGTCTGTTTAGCTTA+TGG | + | chr7.1:6234251-6234270 | MS.gene051894:intron | 25.0% |
| AACCTTAGAAAATCCATTCA+CGG | - | chr7.1:6235325-6235344 | None:intergenic | 30.0% | |
| AATAAACTTGGATGATCCTA+AGG | + | chr7.1:6235448-6235467 | MS.gene051894:intron | 30.0% | |
| ATAACTTTACCAAAAGCCTT+GGG | - | chr7.1:6235123-6235142 | None:intergenic | 30.0% | |
| ATTGAAAAAACCTACGAAGT+AGG | - | chr7.1:6234174-6234193 | None:intergenic | 30.0% | |
| CATAAGCTGAAAACAAATCA+AGG | - | chr7.1:6234290-6234309 | None:intergenic | 30.0% | |
| GAGTATGCAAATAAACTAGA+AGG | - | chr7.1:6235976-6235995 | None:intergenic | 30.0% | |
| GGAATAATGACCTGAAATAT+TGG | - | chr7.1:6234875-6234894 | None:intergenic | 30.0% | |
| GTAAAGTTATACTTCTCTGA+TGG | + | chr7.1:6235133-6235152 | MS.gene051894:intron | 30.0% | |
| GTTGTTATATAACATGTTGG+TGG | - | chr7.1:6233206-6233225 | None:intergenic | 30.0% | |
| TATAACTTTACCAAAAGCCT+TGG | - | chr7.1:6235124-6235143 | None:intergenic | 30.0% | |
| TATTGGATATCCATACTTTG+TGG | + | chr7.1:6233674-6233693 | MS.gene051894:intron | 30.0% | |
| TCTTGACCTTTCACTTATTA+TGG | - | chr7.1:6235011-6235030 | None:intergenic | 30.0% | |
| TGCAATACGTTACATATACA+TGG | - | chr7.1:6234137-6234156 | None:intergenic | 30.0% | |
| TGTAAAATATGTTGTTGGAG+TGG | + | chr7.1:6233327-6233346 | MS.gene051894:CDS | 30.0% | |
| TGTCAATATCTGTTGCATAA+AGG | + | chr7.1:6236143-6236162 | MS.gene051894:CDS | 30.0% | |
| TTATATAACAACACCACATG+TGG | + | chr7.1:6233214-6233233 | MS.gene051894:CDS | 30.0% | |
| TTATGTTGCATATCCTAGTA+TGG | + | chr7.1:6235412-6235431 | MS.gene051894:intron | 30.0% | |
| ! | ACATATTTTACAGTACTGTG+GGG | - | chr7.1:6233319-6233338 | None:intergenic | 30.0% |
| ! | ATTGATTTCAGCTCCTATTA+TGG | + | chr7.1:6236074-6236093 | MS.gene051894:CDS | 30.0% |
| ! | CAACATATTTTACAGTACTG+TGG | - | chr7.1:6233321-6233340 | None:intergenic | 30.0% |
| ! | TATACTTTCTATGGTAGTGT+AGG | + | chr7.1:6234484-6234503 | MS.gene051894:intron | 30.0% |
| ! | TTGAATTTAGTTTACTTCGG+GGG | + | chr7.1:6235784-6235803 | MS.gene051894:intron | 30.0% |
| !! | AAAAGTTTTAGCGAAATCGA+TGG | + | chr7.1:6235920-6235939 | MS.gene051894:CDS | 30.0% |
| !! | ACTTTTTGAAGATACTTCCA+AGG | - | chr7.1:6233717-6233736 | None:intergenic | 30.0% |
| !! | GGTGTTGTTATATAACATGT+TGG | - | chr7.1:6233209-6233228 | None:intergenic | 30.0% |
| !!! | GTCTCCATTTTAGAGTATTT+GGG | - | chr7.1:6233636-6233655 | None:intergenic | 30.0% |
| ACGAAGTAGGATACATAGTA+CGG | - | chr7.1:6234161-6234180 | None:intergenic | 35.0% | |
| AGCGAACATAAAAGAGCAAA+AGG | - | chr7.1:6235998-6236017 | None:intergenic | 35.0% | |
| AGTGGAACTACATTCAAAGA+TGG | - | chr7.1:6235181-6235200 | None:intergenic | 35.0% | |
| ATGTGGAAAGATTCAAAGTC+AGG | + | chr7.1:6235556-6235575 | MS.gene051894:CDS | 35.0% | |
| CAGAAAGAGAACATGACATA+TGG | - | chr7.1:6235351-6235370 | None:intergenic | 35.0% | |
| CATATGTCATGTTCTCTTTC+TGG | + | chr7.1:6235349-6235368 | MS.gene051894:intron | 35.0% | |
| CCAAAGGGTTATACTTTCTA+TGG | + | chr7.1:6234475-6234494 | MS.gene051894:intron | 35.0% | |
| CCATACTTTGTGGATACTTA+CGG | + | chr7.1:6233684-6233703 | MS.gene051894:intron | 35.0% | |
| CTATGTTAGTTACCCAGAAA+TGG | + | chr7.1:6234904-6234923 | MS.gene051894:CDS | 35.0% | |
| GAAACTTCTGTGCATACATT+TGG | + | chr7.1:6235713-6235732 | MS.gene051894:intron | 35.0% | |
| GGGATTAATGCAATTCATGA+AGG | + | chr7.1:6234509-6234528 | MS.gene051894:CDS | 35.0% | |
| TAACATTGTGTTTCGTCTAC+AGG | + | chr7.1:6236257-6236276 | MS.gene051894:intron | 35.0% | |
| TAACTAACATAGAATGGAGC+TGG | - | chr7.1:6234896-6234915 | None:intergenic | 35.0% | |
| TACTATGTATCCTACTTCGT+AGG | + | chr7.1:6234161-6234180 | MS.gene051894:intron | 35.0% | |
| TAGAGAACGAAGGAATTACT+TGG | + | chr7.1:6235895-6235914 | MS.gene051894:CDS | 35.0% | |
| TATCAGATATTGACGTTGGA+AGG | - | chr7.1:6234958-6234977 | None:intergenic | 35.0% | |
| TATTATGGAAGAGAAGCTGA+AGG | + | chr7.1:6236089-6236108 | MS.gene051894:CDS | 35.0% | |
| TATTGACGTTGGAAGGATAA+CGG | - | chr7.1:6234951-6234970 | None:intergenic | 35.0% | |
| TCTGGGTAACTAACATAGAA+TGG | - | chr7.1:6234902-6234921 | None:intergenic | 35.0% | |
| TGTCATTATATGAGCATACC+TGG | - | chr7.1:6236169-6236188 | None:intergenic | 35.0% | |
| TTCAGCTTCTCTTCCATAAT+AGG | - | chr7.1:6236090-6236109 | None:intergenic | 35.0% | |
| TTCTCTAAATGCTTTCACCA+TGG | - | chr7.1:6235882-6235901 | None:intergenic | 35.0% | |
| TTTATTGGAACATGGCCAAA+GGG | + | chr7.1:6234460-6234479 | MS.gene051894:intron | 35.0% | |
| ! | ATACTTTATTTCCGCTTGCA+GGG | + | chr7.1:6236035-6236054 | MS.gene051894:intron | 35.0% |
| ! | CAAGAAGTTTGGGATCTAAA+AGG | - | chr7.1:6234985-6235004 | None:intergenic | 35.0% |
| ! | CAAGCCCAAATACTCTAAAA+TGG | + | chr7.1:6233629-6233648 | MS.gene051894:intron | 35.0% |
| ! | CATATTTTACAGTACTGTGG+GGG | - | chr7.1:6233318-6233337 | None:intergenic | 35.0% |
| ! | CCATAGAAAGTATAACCCTT+TGG | - | chr7.1:6234478-6234497 | None:intergenic | 35.0% |
| ! | TATACTTTATTTCCGCTTGC+AGG | + | chr7.1:6236034-6236053 | MS.gene051894:intron | 35.0% |
| !! | AACCGTGAATGGATTTTCTA+AGG | + | chr7.1:6235320-6235339 | MS.gene051894:CDS | 35.0% |
| !! | AGCTTTCTGAGATATACTAC+TGG | - | chr7.1:6235810-6235829 | None:intergenic | 35.0% |
| !! | ATTCTAAAGTTCCCGCATTA+CGG | - | chr7.1:6234550-6234569 | None:intergenic | 35.0% |
| !! | ATTGATTTTGCAGAGGAGAA+TGG | + | chr7.1:6234676-6234695 | MS.gene051894:intron | 35.0% |
| !! | TCTTAAAAGCTGTTTTGTGC+AGG | + | chr7.1:6235206-6235225 | MS.gene051894:intron | 35.0% |
| !! | TGAAAGCATTTAGAGAACGA+AGG | + | chr7.1:6235885-6235904 | MS.gene051894:CDS | 35.0% |
| !! | TGAAGGTTTTGGCAAAATTG+AGG | + | chr7.1:6236106-6236125 | MS.gene051894:CDS | 35.0% |
| !!! | CATTTTAGAGTATTTGGGCT+TGG | - | chr7.1:6233631-6233650 | None:intergenic | 35.0% |
| !!! | CGTCTCCATTTTAGAGTATT+TGG | - | chr7.1:6233637-6233656 | None:intergenic | 35.0% |
| AATAAAATGCTCCCTGCAAG+CGG | - | chr7.1:6236049-6236068 | None:intergenic | 40.0% | |
| ACAGCAGGTGTATCAAAATC+AGG | - | chr7.1:6233541-6233560 | None:intergenic | 40.0% | |
| ATACTTACGGATATGCACCT+TGG | + | chr7.1:6233697-6233716 | MS.gene051894:intron | 40.0% | |
| ATATCTGTTGCATAAAGGCC+AGG | + | chr7.1:6236148-6236167 | MS.gene051894:CDS | 40.0% | |
| ATTGACGTTGGAAGGATAAC+GGG | - | chr7.1:6234950-6234969 | None:intergenic | 40.0% | |
| CAATTCATGAAGGACACACA+AGG | + | chr7.1:6234519-6234538 | MS.gene051894:CDS | 40.0% | |
| CCGTAAGTATCCACAAAGTA+TGG | - | chr7.1:6233687-6233706 | None:intergenic | 40.0% | |
| CGAAGTAGGATACATAGTAC+GGG | - | chr7.1:6234160-6234179 | None:intergenic | 40.0% | |
| CTTGATTTCCTCTTGCTACA+AGG | + | chr7.1:6235628-6235647 | MS.gene051894:intron | 40.0% | |
| GATAAAACGCTAACCGTGAA+TGG | + | chr7.1:6235309-6235328 | MS.gene051894:CDS | 40.0% | |
| GTTATAGACACAGTCCTTGA+AGG | - | chr7.1:6233457-6233476 | None:intergenic | 40.0% | |
| GTTTATTGGAACATGGCCAA+AGG | + | chr7.1:6234459-6234478 | MS.gene051894:intron | 40.0% | |
| TCAATGCTGTGAAACCTTCA+AGG | + | chr7.1:6233440-6233459 | MS.gene051894:CDS | 40.0% | |
| TGCATCTTTACCTGGAATGT+GGG | + | chr7.1:6235287-6235306 | MS.gene051894:CDS | 40.0% | |
| TGGGTGCTTTGCTACAATAT+GGG | - | chr7.1:6235104-6235123 | None:intergenic | 40.0% | |
| TGTTGAAATATCCGAACCAC+AGG | + | chr7.1:6235943-6235962 | MS.gene051894:CDS | 40.0% | |
| TTAGGATAGACAGATCCTGT+CGG | - | chr7.1:6235061-6235080 | None:intergenic | 40.0% | |
| TTAGTTACCCAGAAATGGCA+AGG | + | chr7.1:6234909-6234928 | MS.gene051894:CDS | 40.0% | |
| TTGCATCTTTACCTGGAATG+TGG | + | chr7.1:6235286-6235305 | MS.gene051894:CDS | 40.0% | |
| TTGGGTGCTTTGCTACAATA+TGG | - | chr7.1:6235105-6235124 | None:intergenic | 40.0% | |
| ! | ATATTGTAGCAAAGCACCCA+AGG | + | chr7.1:6235104-6235123 | MS.gene051894:CDS | 40.0% |
| ! | TTAGAGTATTTGGGCTTGGT+AGG | - | chr7.1:6233627-6233646 | None:intergenic | 40.0% |
| ! | TTTCTATGGTAGTGTAGGCT+GGG | + | chr7.1:6234489-6234508 | MS.gene051894:intron | 40.0% |
| !! | ACTAGCTTTGCATCTTTACC+TGG | + | chr7.1:6235279-6235298 | MS.gene051894:CDS | 40.0% |
| !! | TTCTAAAGTTCCCGCATTAC+GGG | - | chr7.1:6234549-6234568 | None:intergenic | 40.0% |
| AAGCTATGCGCTAGAGCTTA+TGG | - | chr7.1:6234314-6234333 | None:intergenic | 45.0% | |
| AAGGATTCACACCTGTGGTT+CGG | - | chr7.1:6235957-6235976 | None:intergenic | 45.0% | |
| ACTAGAAGGATTCACACCTG+TGG | - | chr7.1:6235962-6235981 | None:intergenic | 45.0% | |
| ACTTCTCTGATGGGATCACA+AGG | + | chr7.1:6235143-6235162 | MS.gene051894:intron | 45.0% | |
| AGGCGTTCCTGTTATTCTCT+TGG | + | chr7.1:6233504-6233523 | MS.gene051894:CDS | 45.0% | |
| AGGGAAAGAGATTCCACATG+TGG | - | chr7.1:6233230-6233249 | None:intergenic | 45.0% | |
| CGTTCCTGTTATTCTCTTGG+CGG | + | chr7.1:6233507-6233526 | MS.gene051894:CDS | 45.0% | |
| CTTCTCTGATGGGATCACAA+GGG | + | chr7.1:6235144-6235163 | MS.gene051894:intron | 45.0% | |
| CTTGCTACAAGGCATGCAAA+AGG | + | chr7.1:6235639-6235658 | MS.gene051894:intron | 45.0% | |
| GAAATTAGTGGCGATGCACA+CGG | + | chr7.1:6233802-6233821 | MS.gene051894:intron | 45.0% | |
| TAGGATAGACAGATCCTGTC+GGG | - | chr7.1:6235060-6235079 | None:intergenic | 45.0% | |
| TTACCCAGAAATGGCAAGGA+TGG | + | chr7.1:6234913-6234932 | MS.gene051894:CDS | 45.0% | |
| TTTGCATGCCTTGTAGCAAG+AGG | - | chr7.1:6235639-6235658 | None:intergenic | 45.0% | |
| ! | AGCGTTTTATCCCACATTCC+AGG | - | chr7.1:6235300-6235319 | None:intergenic | 45.0% |
| ! | CTTTCTATGGTAGTGTAGGC+TGG | + | chr7.1:6234488-6234507 | MS.gene051894:intron | 45.0% |
| ! | GGAAGAGAAGCTGAAGGTTT+TGG | + | chr7.1:6236095-6236114 | MS.gene051894:CDS | 45.0% |
| ! | TAGCCATCCTTGCCATTTCT+GGG | - | chr7.1:6234919-6234938 | None:intergenic | 45.0% |
| ! | TTAGCCATCCTTGCCATTTC+TGG | - | chr7.1:6234920-6234939 | None:intergenic | 45.0% |
| !! | TGGAGAGGTTGTTTCTACCA+TGG | + | chr7.1:6235862-6235881 | MS.gene051894:CDS | 45.0% |
| AAAGCTGCAGTTGCTGCATC+AGG | + | chr7.1:6235824-6235843 | MS.gene051894:CDS | 50.0% | |
| AACGCCTGCTTGAACAAGAG+CGG | - | chr7.1:6233491-6233510 | None:intergenic | 50.0% | |
| ACAAGGTACACCCGTAATGC+GGG | + | chr7.1:6234536-6234555 | MS.gene051894:CDS | 50.0% | |
| ACAAGTGCAGCTGAGGTAAG+AGG | - | chr7.1:6236396-6236415 | None:intergenic | 50.0% | |
| AGCATCTCTTCCTACCCTAC+AGG | + | chr7.1:6236338-6236357 | MS.gene051894:CDS | 50.0% | |
| AGCCCTTTGCAATGACTGGT+TGG | + | chr7.1:6235492-6235511 | MS.gene051894:intron | 50.0% | |
| AGGGGATGAGGTGAGTAAAG+GGG | + | chr7.1:6234783-6234802 | MS.gene051894:intron | 50.0% | |
| CAAGTGCAGCTGAGGTAAGA+GGG | - | chr7.1:6236395-6236414 | None:intergenic | 50.0% | |
| CACAAGGTACACCCGTAATG+CGG | + | chr7.1:6234535-6234554 | MS.gene051894:CDS | 50.0% | |
| CAGGGGATGAGGTGAGTAAA+GGG | + | chr7.1:6234782-6234801 | MS.gene051894:intron | 50.0% | |
| CGCCAACCAGTCATTGCAAA+GGG | - | chr7.1:6235497-6235516 | None:intergenic | 50.0% | |
| GCAAAGCTAGTGTGTGTTGC+TGG | - | chr7.1:6235270-6235289 | None:intergenic | 50.0% | |
| TACACCTGCTGTCATAGCTC+AGG | + | chr7.1:6233549-6233568 | MS.gene051894:CDS | 50.0% | |
| TCTCTCTACAGCTGCCTGTA+GGG | - | chr7.1:6236355-6236374 | None:intergenic | 50.0% | |
| TGCCTGAGCAATACTCTGCT+TGG | - | chr7.1:6234743-6234762 | None:intergenic | 50.0% | |
| TTCTCTCTACAGCTGCCTGT+AGG | - | chr7.1:6236356-6236375 | None:intergenic | 50.0% | |
| ! | ACAGATCCTGTCGGGTTAGA+CGG | - | chr7.1:6235052-6235071 | None:intergenic | 50.0% |
| ! | ATGCTTGCAGTTTGCTCTCC+AGG | + | chr7.1:6234763-6234782 | MS.gene051894:CDS | 50.0% |
| ! | CCTTTGCAATGACTGGTTGG+CGG | + | chr7.1:6235495-6235514 | MS.gene051894:CDS | 50.0% |
| ! | TGCTTGCAGTTTGCTCTCCA+GGG | + | chr7.1:6234764-6234783 | MS.gene051894:CDS | 50.0% |
| !! | AGCAAAGCACCCAAGGCTTT+TGG | + | chr7.1:6235111-6235130 | MS.gene051894:CDS | 50.0% |
| !! | AGCCAAGCAGAGTATTGCTC+AGG | + | chr7.1:6234738-6234757 | MS.gene051894:CDS | 50.0% |
| !! | GGTTTCACAGCATTGACTCG+TGG | - | chr7.1:6233436-6233455 | None:intergenic | 50.0% |
| !! | TGGCGGCTTGGTTATATTGC+AGG | + | chr7.1:6235512-6235531 | MS.gene051894:CDS | 50.0% |
| ACTAGGCTATGCTGGTGGAG+AGG | + | chr7.1:6235847-6235866 | MS.gene051894:CDS | 55.0% | |
| CAGACCTGAGCTATGACAGC+AGG | - | chr7.1:6233556-6233575 | None:intergenic | 55.0% | |
| CAGACTTTGCGGGGAGAGAT+TGG | - | chr7.1:6233255-6233274 | None:intergenic | 55.0% | |
| CCAGCCGCCAAGAGAATAAC+AGG | - | chr7.1:6233514-6233533 | None:intergenic | 55.0% | |
| CCAGGGGATGAGGTGAGTAA+AGG | + | chr7.1:6234781-6234800 | MS.gene051894:intron | 55.0% | |
| CCGCCAACCAGTCATTGCAA+AGG | - | chr7.1:6235498-6235517 | None:intergenic | 55.0% | |
| CCTGTTATTCTCTTGGCGGC+TGG | + | chr7.1:6233511-6233530 | MS.gene051894:CDS | 55.0% | |
| CCTTTACTCACCTCATCCCC+TGG | - | chr7.1:6234784-6234803 | None:intergenic | 55.0% | |
| CTGCAGCCCTTTGCAATGAC+TGG | + | chr7.1:6235488-6235507 | MS.gene051894:intron | 55.0% | |
| GCAGTTGCTGCATCAGGACT+AGG | + | chr7.1:6235830-6235849 | MS.gene051894:CDS | 55.0% | |
| GCATCAGGACTAGGCTATGC+TGG | + | chr7.1:6235839-6235858 | MS.gene051894:CDS | 55.0% | |
| GCCTCTCTCCACGTCTCTTT+CGG | + | chr7.1:6233274-6233293 | MS.gene051894:CDS | 55.0% | |
| GGAGTGGAGCAGAACAGAAG+AGG | + | chr7.1:6233343-6233362 | MS.gene051894:CDS | 55.0% | |
| GGTTTGAGCCGAAAGAGACG+TGG | - | chr7.1:6233285-6233304 | None:intergenic | 55.0% | |
| GTGGAGAGAGGCAGACTTTG+CGG | - | chr7.1:6233266-6233285 | None:intergenic | 55.0% | |
| TACAGGTCGCACTTGTGCCA+GGG | + | chr7.1:6236274-6236293 | MS.gene051894:intron | 55.0% | |
| TACAGTACTGTGGGGGAACG+TGG | - | chr7.1:6233311-6233330 | None:intergenic | 55.0% | |
| TACTGTGGGGGAACGTGGAA+AGG | - | chr7.1:6233306-6233325 | None:intergenic | 55.0% | |
| TCAGGACTAGGCTATGCTGG+TGG | + | chr7.1:6235842-6235861 | MS.gene051894:CDS | 55.0% | |
| TCTACAGCTGCCTGTAGGGT+AGG | - | chr7.1:6236351-6236370 | None:intergenic | 55.0% | |
| TGGAGAGAGGCAGACTTTGC+GGG | - | chr7.1:6233265-6233284 | None:intergenic | 55.0% | |
| TTGCGGGGAGAGATTGGTGA+GGG | - | chr7.1:6233249-6233268 | None:intergenic | 55.0% | |
| TTTGCGGGGAGAGATTGGTG+AGG | - | chr7.1:6233250-6233269 | None:intergenic | 55.0% | |
| ! | AGTTTGCTCTCCAGGGGATG+AGG | + | chr7.1:6234771-6234790 | MS.gene051894:CDS | 55.0% |
| ! | GCTTGCAGTTTGCTCTCCAG+GGG | + | chr7.1:6234765-6234784 | MS.gene051894:CDS | 55.0% |
| CTACAGGTCGCACTTGTGCC+AGG | + | chr7.1:6236273-6236292 | MS.gene051894:intron | 60.0% | |
| GCCACCGCTCTTGTTCAAGC+AGG | + | chr7.1:6233484-6233503 | MS.gene051894:CDS | 60.0% | |
| GCCGAAAGAGACGTGGAGAG+AGG | - | chr7.1:6233278-6233297 | None:intergenic | 60.0% | |
| GCCTGCTTGAACAAGAGCGG+TGG | - | chr7.1:6233488-6233507 | None:intergenic | 60.0% | |
| GGAGAGAGGCAGACTTTGCG+GGG | - | chr7.1:6233264-6233283 | None:intergenic | 60.0% | |
| TCGTCTCCAGATGCACTCCC+TGG | - | chr7.1:6236294-6236313 | None:intergenic | 60.0% | |
| TGTTCGCCGTCTAACCCGAC+AGG | + | chr7.1:6235043-6235062 | MS.gene051894:CDS | 60.0% | |
| ! | CTTGTGCCAGGGAGTGCATC+TGG | + | chr7.1:6236285-6236304 | MS.gene051894:CDS | 60.0% |
| ! | GCAATGACTGGTTGGCGGCT+TGG | + | chr7.1:6235500-6235519 | MS.gene051894:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 6233199 | 6236419 | 6233199 | ID=MS.gene051894 |
| chr7.1 | mRNA | 6233199 | 6236419 | 6233199 | ID=MS.gene051894.t1;Parent=MS.gene051894 |
| chr7.1 | exon | 6233199 | 6233570 | 6233199 | ID=MS.gene051894.t1.exon1;Parent=MS.gene051894.t1 |
| chr7.1 | CDS | 6233199 | 6233570 | 6233199 | ID=cds.MS.gene051894.t1;Parent=MS.gene051894.t1 |
| chr7.1 | exon | 6234506 | 6234599 | 6234506 | ID=MS.gene051894.t1.exon2;Parent=MS.gene051894.t1 |
| chr7.1 | CDS | 6234506 | 6234599 | 6234506 | ID=cds.MS.gene051894.t1;Parent=MS.gene051894.t1 |
| chr7.1 | exon | 6234689 | 6234792 | 6234689 | ID=MS.gene051894.t1.exon3;Parent=MS.gene051894.t1 |
| chr7.1 | CDS | 6234689 | 6234792 | 6234689 | ID=cds.MS.gene051894.t1;Parent=MS.gene051894.t1 |
| chr7.1 | exon | 6234884 | 6235132 | 6234884 | ID=MS.gene051894.t1.exon4;Parent=MS.gene051894.t1 |
| chr7.1 | CDS | 6234884 | 6235132 | 6234884 | ID=cds.MS.gene051894.t1;Parent=MS.gene051894.t1 |
| chr7.1 | exon | 6235228 | 6235341 | 6235228 | ID=MS.gene051894.t1.exon5;Parent=MS.gene051894.t1 |
| chr7.1 | CDS | 6235228 | 6235341 | 6235228 | ID=cds.MS.gene051894.t1;Parent=MS.gene051894.t1 |
| chr7.1 | exon | 6235494 | 6235577 | 6235494 | ID=MS.gene051894.t1.exon6;Parent=MS.gene051894.t1 |
| chr7.1 | CDS | 6235494 | 6235577 | 6235494 | ID=cds.MS.gene051894.t1;Parent=MS.gene051894.t1 |
| chr7.1 | exon | 6235794 | 6235964 | 6235794 | ID=MS.gene051894.t1.exon7;Parent=MS.gene051894.t1 |
| chr7.1 | CDS | 6235794 | 6235964 | 6235794 | ID=cds.MS.gene051894.t1;Parent=MS.gene051894.t1 |
| chr7.1 | exon | 6236056 | 6236169 | 6236056 | ID=MS.gene051894.t1.exon8;Parent=MS.gene051894.t1 |
| chr7.1 | CDS | 6236056 | 6236169 | 6236056 | ID=cds.MS.gene051894.t1;Parent=MS.gene051894.t1 |
| chr7.1 | exon | 6236279 | 6236419 | 6236279 | ID=MS.gene051894.t1.exon9;Parent=MS.gene051894.t1 |
| chr7.1 | CDS | 6236279 | 6236419 | 6236279 | ID=cds.MS.gene051894.t1;Parent=MS.gene051894.t1 |
| Gene Sequence |
| Protein sequence |
