AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene051981

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene051981.t1 MTR_2g099470 75.547 274 34 2 1 243 11 282 1.23e-149 418
MS.gene051981.t1 MTR_2g099465 71.491 228 33 2 48 243 27 254 1.44e-115 331
MS.gene051981.t1 MTR_2g099450 54.132 242 33 5 1 242 11 174 9.55e-75 224
MS.gene051981.t1 MTR_3g118390 33.333 315 124 9 1 243 60 360 3.95e-43 150
MS.gene051981.t1 MTR_8g074350 32.063 315 137 8 2 243 3 313 4.07e-41 143
MS.gene051981.t1 MTR_8g074330 35.417 288 117 9 22 243 29 313 5.85e-41 143
MS.gene051981.t1 MTR_7g110780 40.625 192 79 4 86 243 81 271 2.53e-40 140
MS.gene051981.t1 MTR_8g074335 34.875 281 117 11 22 243 29 302 7.35e-34 124
MS.gene051981.t1 MTR_2g034680 30.151 199 96 6 87 243 104 301 3.08e-19 85.1
MS.gene051981.t1 MTR_1g105535 29.474 190 92 5 95 243 119 307 1.37e-17 80.5
MS.gene051981.t1 MTR_7g021640 28.643 199 100 5 86 243 107 304 5.23e-16 76.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene051981.t1 AT3G54420 59.191 272 69 4 7 243 9 273 1.41e-106 309
MS.gene051981.t1 AT2G43590 49.407 253 93 4 18 243 20 264 5.19e-81 244
MS.gene051981.t1 AT2G43580 46.245 253 102 3 18 243 20 265 3.02e-74 226
MS.gene051981.t1 AT2G43570 44.891 274 110 7 5 243 10 277 1.90e-69 215
MS.gene051981.t1 AT2G43610 40.074 272 123 6 8 243 14 281 2.53e-63 199
MS.gene051981.t1 AT2G43620 39.350 277 124 7 6 243 12 283 3.29e-63 199
MS.gene051981.t1 AT3G47540 38.288 222 89 5 50 243 13 214 4.51e-43 145
MS.gene051981.t1 AT1G02360 42.188 192 76 4 86 243 75 265 2.38e-42 145
MS.gene051981.t1 AT1G02360 42.188 192 76 4 86 243 121 311 5.63e-42 145
MS.gene051981.t1 AT1G02360 42.188 192 76 4 86 243 127 317 6.26e-42 145
MS.gene051981.t1 AT3G12500 33.681 288 118 8 22 243 40 320 3.87e-41 144
MS.gene051981.t1 AT1G56680 34.783 276 135 11 6 243 12 280 2.78e-40 140
MS.gene051981.t1 AT1G56680 34.783 276 135 11 6 243 35 303 5.10e-40 140
MS.gene051981.t1 AT3G47540 37.615 218 88 5 50 239 13 210 1.19e-39 138
MS.gene051981.t1 AT4G01700 40.625 192 79 4 86 243 83 273 3.93e-39 137
MS.gene051981.t1 AT2G43600 31.317 281 147 10 1 243 1 273 1.57e-38 135
MS.gene051981.t1 AT2G43600 31.317 281 147 10 1 243 22 294 3.31e-38 135
MS.gene051981.t1 AT1G05850 26.042 192 100 5 93 243 114 304 2.31e-17 80.1
MS.gene051981.t1 AT1G05850 26.042 192 100 5 93 243 114 304 2.31e-17 80.1
MS.gene051981.t1 AT3G16920 28.646 192 94 6 94 243 147 337 2.62e-16 77.4
MS.gene051981.t1 AT3G16920 28.646 192 94 6 94 243 123 313 3.21e-16 77.0

Find 65 sgRNAs with CRISPR-Local

Find 109 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCATCATTGGCCACTGTTTC+AGG 0.200039 2.2:-3511418 None:intergenic
GGTTTATGTTGTAGCCAAAT+TGG 0.251663 2.2:+3510113 MS.gene051981:CDS
TGTTACCACAATACCCAATT+TGG 0.264709 2.2:-3510127 None:intergenic
GGAAGGGTGGGTGGGTTCTT+TGG 0.276277 2.2:+3510372 MS.gene051981:intron
CAACCATAGTAACCTTTGTT+AGG 0.276718 2.2:-3511319 None:intergenic
TAGGAGTACTAGGTGAAATT+TGG 0.332760 2.2:-3510199 None:intergenic
TCATCACAGTAGTCCTTTGA+TGG 0.340684 2.2:-3511271 None:intergenic
AAGGCTTTGGTGCAACCATT+AGG 0.341342 2.2:+3511503 MS.gene051981:CDS
TCAAGACAGCATTATGGTAT+TGG 0.355700 2.2:+3511452 MS.gene051981:CDS
TGCTATACTGAAGAGATTGA+TGG 0.361166 2.2:+3511247 MS.gene051981:CDS
TGGTAACAGTGATGTATATT+GGG 0.375523 2.2:+3510142 MS.gene051981:CDS
CTATCTTGGAATTACAACTA+TGG 0.385687 2.2:+3511355 MS.gene051981:CDS
GCAACCATTAGGGCTATTAA+TGG 0.385855 2.2:+3511514 MS.gene051981:CDS
TGTCCTTCAAGACAGCATTA+TGG 0.387076 2.2:+3511446 MS.gene051981:CDS
AGCAGCTGCAATCTCGCGTT+TGG 0.388676 2.2:-3510401 None:intergenic
ATACCATAATGCTGTCTTGA+AGG 0.394568 2.2:-3511449 None:intergenic
AGGCTTTGGTGCAACCATTA+GGG 0.395270 2.2:+3511504 MS.gene051981:CDS
GTGGACCGATTCAACTATCT+TGG 0.404150 2.2:+3511341 MS.gene051981:CDS
GCCCCTAACAAAGGTTACTA+TGG 0.414401 2.2:+3511316 MS.gene051981:CDS
GTGGTAACAGTGATGTATAT+TGG 0.418280 2.2:+3510141 MS.gene051981:CDS
GAAGGACACAACAGCATCAT+TGG 0.428454 2.2:-3511431 None:intergenic
GTTTATGTTGTAGCCAAATT+GGG 0.435368 2.2:+3510114 MS.gene051981:CDS
TCGACCATTAATAGCCCTAA+TGG 0.441150 2.2:-3511518 None:intergenic
GGTGTCATCAACCAAGGCTT+TGG 0.445762 2.2:+3511490 MS.gene051981:CDS
AACCATAGTAACCTTTGTTA+GGG 0.447566 2.2:-3511318 None:intergenic
CACTCAATATTGTAGTGAGT+TGG 0.467919 2.2:+3511594 MS.gene051981:CDS
AGTGAGTTGGGTGTTGCTCC+AGG 0.482068 2.2:+3511607 MS.gene051981:CDS
ACTCAATATTGTAGTGAGTT+GGG 0.486051 2.2:+3511595 MS.gene051981:CDS
TAATTCCAAGATAGTTGAAT+CGG 0.491444 2.2:-3511346 None:intergenic
TTGCTAGGACTAGGAGTACT+AGG 0.495622 2.2:-3510209 None:intergenic
CCGCATAACAAGGACCTTGT+TGG 0.499874 2.2:-3510175 None:intergenic
TAATGGTTGCACCAAAGCCT+TGG 0.502879 2.2:-3511501 None:intergenic
AACAAAGGTTACTATGGTTG+TGG 0.504908 2.2:+3511322 MS.gene051981:CDS
AGTGATGTATATTGGGGCAC+AGG 0.505819 2.2:+3510149 MS.gene051981:CDS
ACACGAGTCTGAACTGTGGT+TGG 0.517796 2.2:-3511562 None:intergenic
TCAAAGGACTACTGTGATGA+AGG 0.518479 2.2:+3511274 MS.gene051981:CDS
AATCACTTTGGAAGGGTGGG+TGG 0.519871 2.2:+3510363 MS.gene051981:intron
CAACAAGGTCCTTGTTATGC+GGG 0.525104 2.2:+3510176 MS.gene051981:CDS
CACGAGTCTGAACTGTGGTT+GGG 0.536022 2.2:-3511561 None:intergenic
AAACCATTGTCTCTTCCAGC+TGG 0.544197 2.2:-3511379 None:intergenic
CAAAATTGTGTGTGTGAGGA+AGG 0.544322 2.2:+3510092 MS.gene051981:CDS
ATCACTTTGGAAGGGTGGGT+GGG 0.552854 2.2:+3510364 MS.gene051981:intron
AATTACAACTATGGACCAGC+TGG 0.555687 2.2:+3511364 MS.gene051981:CDS
TAACCTTTGTTAGGGGCACA+TGG 0.560210 2.2:-3511310 None:intergenic
CCAACAAGGTCCTTGTTATG+CGG 0.570087 2.2:+3510175 MS.gene051981:CDS
GAAATTTGGCCCGCATAACA+AGG 0.574082 2.2:-3510185 None:intergenic
TGGGGCACAGGGTGCCAACA+AGG 0.579156 2.2:+3510161 MS.gene051981:CDS
AGAGATTGATGGTCCATCAA+AGG 0.593380 2.2:+3511258 MS.gene051981:CDS
ACCACAGTTCAGACTCGTGT+TGG 0.593974 2.2:+3511565 MS.gene051981:CDS
ATTGAACTCTCCTGAAACAG+TGG 0.597631 2.2:+3511408 MS.gene051981:CDS
TGTAGCCAAATTGGGTATTG+TGG 0.610691 2.2:+3510122 MS.gene051981:CDS
TGGCCATGTGCCCCTAACAA+AGG 0.618946 2.2:+3511307 MS.gene051981:CDS
GGACCAGCTGGAAGAGACAA+TGG 0.624670 2.2:+3511376 MS.gene051981:CDS
TAGCAAGTAAGCTTATCACC+TGG 0.628192 2.2:-3511625 None:intergenic
GTCACATTGACATCATTGCT+AGG 0.632840 2.2:-3510224 None:intergenic
TGCTCAAAATTGTGTGTGTG+AGG 0.638766 2.2:+3510088 MS.gene051981:CDS
TTGACATCATTGCTAGGACT+AGG 0.646089 2.2:-3510218 None:intergenic
GTGATGTATATTGGGGCACA+GGG 0.653187 2.2:+3510150 MS.gene051981:CDS
ACCATAGTAACCTTTGTTAG+GGG 0.662003 2.2:-3511317 None:intergenic
AATGGTCGACTTGAATGTGA+TGG 0.664152 2.2:+3511532 MS.gene051981:CDS
GTGCACGGTGTCATCAACCA+AGG 0.695993 2.2:+3511484 MS.gene051981:CDS
GTGATGAAGGCAACACAGAG+TGG 0.710896 2.2:+3511287 MS.gene051981:CDS
TATTGGATGAATAATGTGCA+CGG 0.742029 2.2:+3511469 MS.gene051981:CDS
GGTAACAGTGATGTATATTG+GGG 0.747964 2.2:+3510143 MS.gene051981:CDS
ACCAACACGAGTCTGAACTG+TGG 0.761414 2.2:-3511566 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATTAACAAAATTTTAGAA+TGG + chr2.2:3510519-3510538 MS.gene051981:intron 10.0%
!! TACAATTTCAATGAATTAAA+CGG + chr2.2:3510708-3510727 MS.gene051981:intron 15.0%
!! TTAATTCATTGAAATTGTAA+AGG - chr2.2:3510707-3510726 None:intergenic 15.0%
!! AAAGTGATTGTAAAAATTGA+CGG - chr2.2:3510352-3510371 None:intergenic 20.0%
!! ACAATTTCAATGAATTAAAC+GGG + chr2.2:3510709-3510728 MS.gene051981:intron 20.0%
! AACCATGATCATGATAAAAA+AGG - chr2.2:3510054-3510073 None:intergenic 25.0%
! AAGTTTAAACCCATTTGATT+TGG - chr2.2:3511158-3511177 None:intergenic 25.0%
! ACCATGATCATGATAAAAAA+GGG - chr2.2:3510053-3510072 None:intergenic 25.0%
! ATTCTCTTCAATACCAATTT+GGG - chr2.2:3511078-3511097 None:intergenic 25.0%
! TAATTCCAAGATAGTTGAAT+CGG - chr2.2:3511349-3511368 None:intergenic 25.0%
!! ATTTTTACAATCACTTTGGA+AGG + chr2.2:3510355-3510374 MS.gene051981:intron 25.0%
!! GTCAATTTTTACAATCACTT+TGG + chr2.2:3510351-3510370 MS.gene051981:intron 25.0%
!!! AATATTGATTCTGTTGAAGT+TGG - chr2.2:3510861-3510880 None:intergenic 25.0%
!!! TTTTTACAATCACTTTGGAA+GGG + chr2.2:3510356-3510375 MS.gene051981:intron 25.0%
AACAAGAACTGAACTAAATG+AGG - chr2.2:3510942-3510961 None:intergenic 30.0%
AACCATAGTAACCTTTGTTA+GGG - chr2.2:3511321-3511340 None:intergenic 30.0%
ACTCAATATTGTAGTGAGTT+GGG + chr2.2:3511595-3511614 MS.gene051981:CDS 30.0%
ATGTTGAGAAACTGAGAAAA+TGG - chr2.2:3511192-3511211 None:intergenic 30.0%
CGTATAAGCTATATATGGTT+TGG + chr2.2:3510966-3510985 MS.gene051981:intron 30.0%
CTATCTTGGAATTACAACTA+TGG + chr2.2:3511355-3511374 MS.gene051981:CDS 30.0%
GATTCTCTTCAATACCAATT+TGG - chr2.2:3511079-3511098 None:intergenic 30.0%
GTTTATGTTGTAGCCAAATT+GGG + chr2.2:3510114-3510133 MS.gene051981:CDS 30.0%
TATTGGATGAATAATGTGCA+CGG + chr2.2:3511469-3511488 MS.gene051981:CDS 30.0%
TCTAGCGTATAAGCTATATA+TGG + chr2.2:3510961-3510980 MS.gene051981:intron 30.0%
TGAGATCAAAGCCTATTTAA+CGG - chr2.2:3510739-3510758 None:intergenic 30.0%
TGGTAACAGTGATGTATATT+GGG + chr2.2:3510142-3510161 MS.gene051981:CDS 30.0%
!!! ACCCTTTTTTATCATGATCA+TGG + chr2.2:3510049-3510068 MS.gene051981:CDS 30.0%
AAACGGGAAATCCGTTAAAT+AGG + chr2.2:3510725-3510744 MS.gene051981:intron 35.0%
AACAAAGGTTACTATGGTTG+TGG + chr2.2:3511322-3511341 MS.gene051981:CDS 35.0%
ACCACAAGACCAAATCAAAT+GGG + chr2.2:3511146-3511165 MS.gene051981:intron 35.0%
ACCATAGTAACCTTTGTTAG+GGG - chr2.2:3511320-3511339 None:intergenic 35.0%
ATACCATAATGCTGTCTTGA+AGG - chr2.2:3511452-3511471 None:intergenic 35.0%
ATTTGATCAGCATTTCAGCT+TGG + chr2.2:3510890-3510909 MS.gene051981:intron 35.0%
CAACCATAGTAACCTTTGTT+AGG - chr2.2:3511322-3511341 None:intergenic 35.0%
CACTCAATATTGTAGTGAGT+TGG + chr2.2:3511594-3511613 MS.gene051981:CDS 35.0%
CTAAATTAACCCACCCAAAT+TGG + chr2.2:3511062-3511081 MS.gene051981:intron 35.0%
GGTAACAGTGATGTATATTG+GGG + chr2.2:3510143-3510162 MS.gene051981:CDS 35.0%
GGTTTATGTTGTAGCCAAAT+TGG + chr2.2:3510113-3510132 MS.gene051981:CDS 35.0%
GTGGTAACAGTGATGTATAT+TGG + chr2.2:3510141-3510160 MS.gene051981:CDS 35.0%
TACCACAAGACCAAATCAAA+TGG + chr2.2:3511145-3511164 MS.gene051981:intron 35.0%
TCAAGACAGCATTATGGTAT+TGG + chr2.2:3511452-3511471 MS.gene051981:CDS 35.0%
TCTTCAATACCAATTTGGGT+GGG - chr2.2:3511074-3511093 None:intergenic 35.0%
TGCTATACTGAAGAGATTGA+TGG + chr2.2:3511247-3511266 MS.gene051981:CDS 35.0%
TGTTACCACAATACCCAATT+TGG - chr2.2:3510130-3510149 None:intergenic 35.0%
! AAGCTATATATGGTTTGGCT+AGG + chr2.2:3510971-3510990 MS.gene051981:intron 35.0%
! TTTTGAGCACTAACACTTTC+TGG - chr2.2:3510077-3510096 None:intergenic 35.0%
!! TAGGAGTACTAGGTGAAATT+TGG - chr2.2:3510202-3510221 None:intergenic 35.0%
!! TTGATTTGGTCTTGTGGTAT+TGG - chr2.2:3511144-3511163 None:intergenic 35.0%
AATTACAACTATGGACCAGC+TGG + chr2.2:3511364-3511383 MS.gene051981:CDS 40.0%
ATTGAACTCTCCTGAAACAG+TGG + chr2.2:3511408-3511427 MS.gene051981:CDS 40.0%
CAAAATTGTGTGTGTGAGGA+AGG + chr2.2:3510092-3510111 MS.gene051981:CDS 40.0%
CATCCTTTGAGCTAGCATTT+GGG - chr2.2:3510763-3510782 None:intergenic 40.0%
CTCGTAAACTTGAGCAATGT+GGG + chr2.2:3510815-3510834 MS.gene051981:intron 40.0%
CTCTTCAATACCAATTTGGG+TGG - chr2.2:3511075-3511094 None:intergenic 40.0%
GCAACCATTAGGGCTATTAA+TGG + chr2.2:3511514-3511533 MS.gene051981:CDS 40.0%
GTCACATTGACATCATTGCT+AGG - chr2.2:3510227-3510246 None:intergenic 40.0%
TAGCAAGTAAGCTTATCACC+TGG - chr2.2:3511628-3511647 None:intergenic 40.0%
TCAAAGGACTACTGTGATGA+AGG + chr2.2:3511274-3511293 MS.gene051981:CDS 40.0%
TCATCACAGTAGTCCTTTGA+TGG - chr2.2:3511274-3511293 None:intergenic 40.0%
TCATCCTTTGAGCTAGCATT+TGG - chr2.2:3510764-3510783 None:intergenic 40.0%
TCGACCATTAATAGCCCTAA+TGG - chr2.2:3511521-3511540 None:intergenic 40.0%
TGAGAATGTGCTCCTCTTTA+AGG - chr2.2:3511112-3511131 None:intergenic 40.0%
TGCTCAAAATTGTGTGTGTG+AGG + chr2.2:3510088-3510107 MS.gene051981:CDS 40.0%
TGTCCTTCAAGACAGCATTA+TGG + chr2.2:3511446-3511465 MS.gene051981:CDS 40.0%
TTGACATCATTGCTAGGACT+AGG - chr2.2:3510221-3510240 None:intergenic 40.0%
! AGAGATTGATGGTCCATCAA+AGG + chr2.2:3511258-3511277 MS.gene051981:CDS 40.0%
! TACAATCACTTTGGAAGGGT+GGG + chr2.2:3510360-3510379 MS.gene051981:intron 40.0%
! TGTAGCCAAATTGGGTATTG+TGG + chr2.2:3510122-3510141 MS.gene051981:CDS 40.0%
! TTAAAGAGGAGCACATTCTC+AGG + chr2.2:3511111-3511130 MS.gene051981:intron 40.0%
! TTACAATCACTTTGGAAGGG+TGG + chr2.2:3510359-3510378 MS.gene051981:intron 40.0%
!! AATGGTCGACTTGAATGTGA+TGG + chr2.2:3511532-3511551 MS.gene051981:CDS 40.0%
!! ACCCATTTGATTTGGTCTTG+TGG - chr2.2:3511150-3511169 None:intergenic 40.0%
!!! GGAAGAGACAATGGTTTTGA+TGG + chr2.2:3511385-3511404 MS.gene051981:CDS 40.0%
AAACCATTGTCTCTTCCAGC+TGG - chr2.2:3511382-3511401 None:intergenic 45.0%
AGTGATGTATATTGGGGCAC+AGG + chr2.2:3510149-3510168 MS.gene051981:CDS 45.0%
CATCCCAAATGCTAGCTCAA+AGG + chr2.2:3510757-3510776 MS.gene051981:intron 45.0%
GAAATTTGGCCCGCATAACA+AGG - chr2.2:3510188-3510207 None:intergenic 45.0%
GAAGGACACAACAGCATCAT+TGG - chr2.2:3511434-3511453 None:intergenic 45.0%
GCCCCTAACAAAGGTTACTA+TGG + chr2.2:3511316-3511335 MS.gene051981:CDS 45.0%
GCTCGTAAACTTGAGCAATG+TGG + chr2.2:3510814-3510833 MS.gene051981:intron 45.0%
GTGATGTATATTGGGGCACA+GGG + chr2.2:3510150-3510169 MS.gene051981:CDS 45.0%
TAATGGTTGCACCAAAGCCT+TGG - chr2.2:3511504-3511523 None:intergenic 45.0%
TCGAACCTGAGACCTTAAAG+AGG + chr2.2:3511097-3511116 MS.gene051981:intron 45.0%
! AAGGCTTTGGTGCAACCATT+AGG + chr2.2:3511503-3511522 MS.gene051981:CDS 45.0%
! AGGCTTTGGTGCAACCATTA+GGG + chr2.2:3511504-3511523 MS.gene051981:CDS 45.0%
! CAACAAGGTCCTTGTTATGC+GGG + chr2.2:3510176-3510195 MS.gene051981:CDS 45.0%
! CAAGCTGATTCTAGTTGTGC+AGG + chr2.2:3510291-3510310 MS.gene051981:intron 45.0%
! CCAACAAGGTCCTTGTTATG+CGG + chr2.2:3510175-3510194 MS.gene051981:CDS 45.0%
! GTGGACCGATTCAACTATCT+TGG + chr2.2:3511341-3511360 MS.gene051981:CDS 45.0%
! TAACCTTTGTTAGGGGCACA+TGG - chr2.2:3511313-3511332 None:intergenic 45.0%
!! TTGCTAGGACTAGGAGTACT+AGG - chr2.2:3510212-3510231 None:intergenic 45.0%
ACACGAGTCTGAACTGTGGT+TGG - chr2.2:3511565-3511584 None:intergenic 50.0%
ACCAACACGAGTCTGAACTG+TGG - chr2.2:3511569-3511588 None:intergenic 50.0%
ACCACAGTTCAGACTCGTGT+TGG + chr2.2:3511565-3511584 MS.gene051981:CDS 50.0%
CACGAGTCTGAACTGTGGTT+GGG - chr2.2:3511564-3511583 None:intergenic 50.0%
CCGCATAACAAGGACCTTGT+TGG - chr2.2:3510178-3510197 None:intergenic 50.0%
GCATCATTGGCCACTGTTTC+AGG - chr2.2:3511421-3511440 None:intergenic 50.0%
GTGATGAAGGCAACACAGAG+TGG + chr2.2:3511287-3511306 MS.gene051981:CDS 50.0%
! AATCACTTTGGAAGGGTGGG+TGG + chr2.2:3510363-3510382 MS.gene051981:intron 50.0%
! ATCACTTTGGAAGGGTGGGT+GGG + chr2.2:3510364-3510383 MS.gene051981:intron 50.0%
! GGTGTCATCAACCAAGGCTT+TGG + chr2.2:3511490-3511509 MS.gene051981:CDS 50.0%
!! GTGCTCCTCTTTAAGGTCTC+AGG - chr2.2:3511105-3511124 None:intergenic 50.0%
AGCAGCTGCAATCTCGCGTT+TGG - chr2.2:3510404-3510423 None:intergenic 55.0%
GGACCAGCTGGAAGAGACAA+TGG + chr2.2:3511376-3511395 MS.gene051981:CDS 55.0%
TGGCCATGTGCCCCTAACAA+AGG + chr2.2:3511307-3511326 MS.gene051981:CDS 55.0%
!! AGTGAGTTGGGTGTTGCTCC+AGG + chr2.2:3511607-3511626 MS.gene051981:CDS 55.0%
!! GTGCACGGTGTCATCAACCA+AGG + chr2.2:3511484-3511503 MS.gene051981:CDS 55.0%
! GGAAGGGTGGGTGGGTTCTT+TGG + chr2.2:3510372-3510391 MS.gene051981:intron 60.0%
! TGGGGCACAGGGTGCCAACA+AGG + chr2.2:3510161-3510180 MS.gene051981:CDS 65.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 3510026 3511648 3510026 ID=MS.gene051981
chr2.2 mRNA 3510026 3511648 3510026 ID=MS.gene051981.t1;Parent=MS.gene051981
chr2.2 exon 3510026 3510275 3510026 ID=MS.gene051981.t1.exon1;Parent=MS.gene051981.t1
chr2.2 CDS 3510026 3510275 3510026 ID=cds.MS.gene051981.t1;Parent=MS.gene051981.t1
chr2.2 exon 3510377 3510451 3510377 ID=MS.gene051981.t1.exon2;Parent=MS.gene051981.t1
chr2.2 CDS 3510377 3510451 3510377 ID=cds.MS.gene051981.t1;Parent=MS.gene051981.t1
chr2.2 exon 3511242 3511648 3511242 ID=MS.gene051981.t1.exon3;Parent=MS.gene051981.t1
chr2.2 CDS 3511242 3511648 3511242 ID=cds.MS.gene051981.t1;Parent=MS.gene051981.t1
Gene Sequence

>MS.gene051981

ATGTCTATAGCAAAATTTGCTATACCCTTTTTTATCATGATCATGGTTCCAGAAAGTGTTAGTGCTCAAAATTGTGTGTGTGAGGAAGGTTTATGTTGTAGCCAAATTGGGTATTGTGGTAACAGTGATGTATATTGGGGCACAGGGTGCCAACAAGGTCCTTGTTATGCGGGCCAAATTTCACCTAGTACTCCTAGTCCTAGCAATGATGTCAATGTGACTGACATTGTTACACAAGAATTCTTCAATAGTATGTATATTTGATCAAGCTGATTCTAGTTGTGCAGGAAAGAACTTCTACACAAGAGCTGCTTTTCTTGATGCCGTCAATTTTTACAATCACTTTGGAAGGGTGGGTGGGTTCTTTGGATGACTCCAAACGCGAGATTGCAGCTGCTTTTGCACATTTCACTCATGAAACTCGAAGTAAGTATTAAATATAACTCATTTAAAAATCAATCACAAGTTTAGTTTTCGTGCATATTGATCACTAAAATTAACAAAATTTTAGAATGGTATTTAAAAATTTAATATTTTCGATCATGTCACTTTCAAGACAATTTCAATGATTAAATTGATTGAACTAAGAACTAACACTAACATAATCAACAATTATTATTTATTATTTTCAATAATCATTTGAGATTTCAGTTAATCACAAAGATAAAATTGTCAAAACCTTTACAATTTCAATGAATTAAACGGGAAATCCGTTAAATAGGCTTTGATCTCATCCCAAATGCTAGCTCAAAGGATGAAAGTACTCAAGCATATTTATACAATCAACAGCTCGTAAACTTGAGCAATGTGGGATAAATAACAAACTACAAAACCAACTTCAACAGAATCAATATTATTAATGAAATTTGATCAGCATTTCAGCTTGGTTAACAGTTGTTTGAGACTAACGAGACCTCATTTAGTTCAGTTCTTGTTCTAGCGTATAAGCTATATATGGTTTGGCTAGGTTTAATTTTGTACACACATACATACATACATCTATAAGACTAATAAGTAAATTTCATTTTTTTAAAAGCTAAATTAACCCACCCAAATTGGTATTGAAGAGAATCGAACCTGAGACCTTAAAGAGGAGCACATTCTCAGGTCTCAAGCCAATACCACAAGACCAAATCAAATGGGTTTAAACTTTTTTTTAATCTCCATTTTCTCAGTTTCTCAACATACATAACATGTGAAATTAATGTTGATGCAGATTTTTGCTATACTGAAGAGATTGATGGTCCATCAAAGGACTACTGTGATGAAGGCAACACAGAGTGGCCATGTGCCCCTAACAAAGGTTACTATGGTTGTGGACCGATTCAACTATCTTGGAATTACAACTATGGACCAGCTGGAAGAGACAATGGTTTTGATGGATTGAACTCTCCTGAAACAGTGGCCAATGATGCTGTTGTGTCCTTCAAGACAGCATTATGGTATTGGATGAATAATGTGCACGGTGTCATCAACCAAGGCTTTGGTGCAACCATTAGGGCTATTAATGGTCGACTTGAATGTGATGGTGCTAACCCAACCACAGTTCAGACTCGTGTTGGTTACTACACTCAATATTGTAGTGAGTTGGGTGTTGCTCCAGGTGATAAGCTTACTTGCTAA
Protein sequence

>MS.gene051981.t1

MSIAKFAIPFFIMIMVPESVSAQNCVCEEGLCCSQIGYCGNSDVYWGTGCQQGPCYAGQISPSTPSPSNDVNVTDIVTQEFFNRWVGSLDDSKREIAAAFAHFTHETRNFCYTEEIDGPSKDYCDEGNTEWPCAPNKGYYGCGPIQLSWNYNYGPAGRDNGFDGLNSPETVANDAVVSFKTALWYWMNNVHGVINQGFGATIRAINGRLECDGANPTTVQTRVGYYTQYCSELGVAPGDKLTC